Cp4.1LG06g09780 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG06g09780
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	RmlC-like cupins superfamily protein
Location	Cp4.1LG06 : 7702881 .. 7706499 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGATAAGGTAGGAGTCGATGAAACCAATTCCAAGTGGCATAAGAACAGATTTATGGGCAAAAGGATAATTGATAATATAGCCCTAAAAATAGGGGAAATCAAATAGTGAGGATCTTGGGAGTTGCGATGGCTTCCGCAGTGAACGGTTTCTCATTACTAAATTTAAAACCCCCCACTTCCCTCAGTAAACCCAGAAACCTCTCTTTGAACTTCGCGAAAAGGGCACCATCACTTCAGATTCGAGCCGATTCCATGGCGACTGAGAGGCTGGGCATCAAGGTTGAGAAGAATCCGCCTGAATCTAAGCTTACTGAACTCGGCGTTCGTCAATGGCCCAAGTATTTTGATTTCTATATCTCTTTTCTTGATTGTTTTCTCCTTTTAATTGCTGCAATATCATTGTTTCGGCCGCCTAATGTTTACTGGTTGTTGATGTTGATGGCCCGATTGGCTGTTCTTTTTATGATCTAGCCTTGATATTAGCGATGTTAGGAGTTTTGGAATTGGGTTTCAATCTGTTTTGAGAGTTTATGAATGTTTATTAATAGATGGATGATTGGATGCTTAAGGTGTTGTTATTTTGATATTTGATCGCTTGAAGTTTCTGGTTGGACGTTGTGCATATTGTCATTTCTTGTTTGGTTGTTAGGCAGGTAGCTAAGACTAAGACTAAGAAGAACGATTAGGAATCCTGACCTCCACGATGATATGATATTGTCTACTTTGAGCATAAGCTTTACTTTTGGTTTTTACAAAAGGTCTCGGAGATGTATTCCTTACTTATAAATCCGTGATCATTTCTTTGATTAGTCAATGTGGGACTCCCGCCCCTTGAACAAAGTACATCATAGAGCCTCCCTGAGGCCTATGGAGCTCTCGAACAGCCTCTCCTTAATCGAGGCTTGACTCTTAAAGAGTACTCGAACAAAGTACATCTTTGTTCGACACTTGAGTCATTTTTTACTACACCTTTGAGGCTCACAAATTCTTTGTTTGACGTTTGAGCATTCAGTTGTCATGGTTAAGTTAAGGGCATGACTTTGCTTTTGGTTTTACCGAAAGGTCTCATACCAATAGNCCCCCACTTCCCTCAGTAAACCCAGAAACCTCTCTTTGAACTTCGCGAAAAGGGCACCATCACTTCAGATTCGAGCCGATTCCATGGCGACTGAGAGGCTGGGCATCAAGGTTGAGAAGAATCCGCCTGAATCTAAGCTTACTGAACTCGGCGTTCGTCAATGGCCCAAGTATTTTGATTTCTATATCTCTTTTCTTGATTGTTTTCTCCTTTTAATTGCTGCAATATCATTGTTTCGGCCGCCTAATGTTTACTGGTTGTTGATGTTGATGGCCCGATTGGCTGTTCTTTTTATGATCTAGCCTTGATATTAGCGATGTTAGGAGTTTTGGAATTGGGTTTCAATCTGTTTTGAGAGTTTATGAATGTTTATTAATAGATGGATGATTGGATGCTTAAGGTGTTGTTATTTTGATATTTGATCGCTTGAAGTTTCTGGTTGGACGTTGTGCATATTGTCATTTCTTGTTTGGTTGTTAGGCAGGTAGCTAAGACTAAGACTAAGAAGAACGATTAGGAATCCTGACCTCCACGATGATATGATATTGTCTACTTTGAGCATAAGCTTTACTTTTGGTTTTTACAAAAGGTCTCGGAGATGTATTCCTTACTTATAAATCCGTGATCATTTCTTTGATTAGTCAATGTGGGACTCCCGCCCCTTGAACAAAGTACATCATAGAGCCTCCCTGAGGCCTATGGAGCTCTCGAACAGCCTCTCCTTAATCGAGGCTTGACTCTTAAAGAGTACTCGAACAAAGTACATCTTTGTTCGACACTTGAGTCATTTTTTACTACACCTTTGAGGCTCACAAATTCTTTGTTTGACGTTTGAGCATTCAGTTGTCATGGTTAAGTTAAGGGCATGACTTTGCTTTTGGTTTTACCGAAAGGTCTCATACCAATAGAGATGTATTCCTTTATTAATCTATGGTCATCTTCTTAATTAGCCGATGTGGGACTCCCTCCCAACCATCCTCCCCTCGAACAAAGTACACCATAGAGCCTCCCCGAGGCCTATGGAGTCCTCGAACAGTCTCCCCTTAATCAAGGCTCGACTTTTTTTTTTTTTTTTTGAAGGATTTTGTATGTTGGGATGTGGGGTGTCAAATAACTCATTACAAGTGGGGCATGTCTTTGTCTTACTAGGTTTCAAGATGTATGTTGTTAGTGTTGAGGATTGTTGGAAGGGAGTCCCACATTGGCTAATTAAGGAGATGATCACGGATTTATAAGCAAGAAATACATCCCATTGGTATTTGCTCTTTTTTTACGGAAACCAAAAGCAAAGTCATGAGAGCATATGCTCAAAGTGAACAATATCATACCATTGTGGAGAGTCATGATTCATAATATAGTATCAAACCCATGCCCTTAACTTAGTCATGCTAATCGAATCCTCAAGTATCGAATAAAGAAATTGATAGCCTAGAAGGTGTAGTCAAAAGTGACTCAAGTGTCGAACAAATGGTGCACTTTGTTCGAGGGCTTTAGAGAAGAGTCGAGCCTTGATTAAGGGGAGTATGTTCAAGGACTCCACAGACCTCAAGGGAGGCTCTATGGTGTTCTTTGTTCGAGGAAAGGATTGTTGGGAGGGAGTTCGTAAGTAAGGAATACGTCTCCATTGGTATGAGGCCTTTTGGGGAAACCAAAAGTAAAGTCACGAGAATTTATGCTCAAAGTGGATAATATCATACCATTGTAAAGGTCCGTAGTTCCAATAGTATTATTTCAAAATAGTTTATGCTAATCTGTTCGTCACCAAATTCATAACTAGTACCTTAGTTTTTGCTTTACAAACCAATAAAGATATATAAATTGTTCAACAGAAACTTGAAAGCATGAACTGGAGAGATGGGTTTTTGATTAATTGGATGTTTTGATTGTGAATCCAACAGGTGGGGGTGTGGGCCGAGCAAATTCCCATGGACATATTCGGACAAGGAGACATGCTATTTGCTAGAGGGAAAGGTAAAGGTTACTCCAGCAGGCTCAGATGAGGGGGTCGAGATTGGCGCTGGGGATTTGGTTGTGTTCCCAGCGGGAATGAGCTGCACTTGGGATGTCTCAATTGCTGTGGATAAGCACTATAAATTTGGTTAGTTGTATCTAAAGCCCTTTGTATGTTCATGAACTCCATTGCTCCTTTTCTTTGTTCAATCGAACCGAACCGAACCAAACCGGATTTATAGGTTCTATTACTGAATTGCTTATGCCACAAACTGAGTATCAATCCAAGATCACATTTGAGTTTGATGCTCACAATTAGAACCTAAAGTTTTCCTTCTTGTATCCCGATAGGGAGGGCGCGACGACCCGTCGAATTCACTCAGAAAAATCCTCGAATTGCACATATAGAAAGAAAACGAACTATTTCTATTTTCAGAGCTTAGGTATAGAATGACTTTTTGGTCTCTTTCGTCCGGTGGTTAGGACATTGTCTTTCCATGTCGAAGATACGAGTTCGATTCTCATAAGGAATAGGTATGATTTTCCATGTCGAAGATACGAGTTCGATTCTCATAAGGAATAGGTATGAT

mRNA sequence

CGGATAAGGTAGGAGTCGATGAAACCAATTCCAAGTGGCATAAGAACAGATTTATGGGCAAAAGGATAATTGATAATATAGCCCTAAAAATAGGGGAAATCAAATAGTGAGGATCTTGGGAGTTGCGATGGCTTCCGCAGTGAACGGTTTCTCATTACTAAATTTAAAACCCCCCACTTCCCTCAGTAAACCCAGAAACCTCTCTTTGAACTTCGCGAAAAGGGCACCATCACTTCAGATTCGAGCCGATTCCATGGCGACTGAGAGGCTGGGCATCAAGGTTGAGAAGAATCCGCCTGAATCTAAGCTTACTGAACTCGGCGTTCGTCAATGGCCCAAATTCGAGCCGATTCCATGGCGACTGAGAGGCTGGGCATCAAGGTTGAGAAGAATCCGCCTGAATCTAAGCTTACTGAACTCGGCGTTCGTCAATGGCCCAAGTGGGGGTGTGGGCCGAGCAAATTCCCATGGACATATTCGGACAAGGAGACATGCTATTTGCTAGAGGGAAAGGTAAAGGTTACTCCAGCAGGCTCAGATGAGGGGGTCGAGATTGGCGCTGGGGATTTGGTTGTGTTCCCAGCGGGAATGAGCTGCACTTGGGATGTCTCAATTGCTGTGGATAAGCACTATAAATTTGGTTAGTTGTATCTAAAGCCCTTTGTATGTTCATGAACTCCATTGCTCCTTTTCTTTGTTCAATCGAACCGAACCGAACCAAACCGGATTTATAGGTTCTATTACTGAATTGCTTATGCCACAAACTGAGTATCAATCCAAGATCACATTTGAGTTTGATGCTCACAATTAGAACCTAAAGTTTTCCTTCTTGTATCCCGATAGGGAGGGCGCGACGACCCGTCGAATTCACTCAGAAAAATCCTCGAATTGCACATATAGAAAGAAAACGAACTATTTCTATTTTCAGAGCTTAGGTATAGAATGACTTTTTGGTCTCTTTCGTCCGGTGGTTAGGACATTGTCTTTCCATGTCGAAGATACGAGTTCGATTCTCATAAGGAATAGGTATGATTTTCCATGTCGAAGATACGAGTTCGATTCTCATAAGGAATAGGTATGAT

Coding sequence (CDS)

ATGGCCCAAATTCGAGCCGATTCCATGGCGACTGAGAGGCTGGGCATCAAGGTTGAGAAGAATCCGCCTGAATCTAAGCTTACTGAACTCGGCGTTCGTCAATGGCCCAAGTGGGGGTGTGGGCCGAGCAAATTCCCATGGACATATTCGGACAAGGAGACATGCTATTTGCTAGAGGGAAAGGTAAAGGTTACTCCAGCAGGCTCAGATGAGGGGGTCGAGATTGGCGCTGGGGATTTGGTTGTGTTCCCAGCGGGAATGAGCTGCACTTGGGATGTCTCAATTGCTGTGGATAAGCACTATAAATTTGGTTAG

Protein sequence

MAQIRADSMATERLGIKVEKNPPESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSDEGVEIGAGDLVVFPAGMSCTWDVSIAVDKHYKFG

Homology

[Close]

BLAST of Cp4.1LG06g09780 vs. TrEMBL
Match: A0A0A0KVZ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G646710 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 2.5e-51
Identity = 96/101 (95.05%), Postives = 98/101 (97.03%), Query Frame = 1


Query: 3   QIRADSMATERLGIKVEKNPPESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKV 62
           QIRADSMATERLGIKVEKNP ESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKV
Sbjct: 37  QIRADSMATERLGIKVEKNPSESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKV 96

Query: 63  KVTPAGSDEGVEIGAGDLVVFPAGMSCTWDVSIAVDKHYKF 104
           KVTPAGS+E VEIGAGDLVVFP GMSCTWDVS+AVDKHYKF
Sbjct: 97  KVTPAGSNESVEIGAGDLVVFPKGMSCTWDVSVAVDKHYKF 137

[Close]

BLAST of Cp4.1LG06g09780 vs. TrEMBL
Match: R0GXZ3_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10002235mg PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 7.0e-46
Identity = 87/103 (84.47%), Postives = 93/103 (90.29%), Query Frame = 1


Query: 1   MAQIRADSMATERLGIKVEKNPPESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEG 60
           MA IRA+SMATE+LGI VEKNPPESKLT+LGVR WPKWGC PSKFPWTYS KETCYLLEG
Sbjct: 33  MAAIRAESMATEKLGITVEKNPPESKLTQLGVRNWPKWGCPPSKFPWTYSAKETCYLLEG 92

Query: 61  KVKVTPAGSDEGVEIGAGDLVVFPAGMSCTWDVSIAVDKHYKF 104
           KVKV P GS+EGVEI AGD VVFP GMSCTWDVS+AVDKHY+F
Sbjct: 93  KVKVYPEGSEEGVEIEAGDFVVFPKGMSCTWDVSVAVDKHYQF 135

[Close]

BLAST of Cp4.1LG06g09780 vs. TrEMBL
Match: Q8LEK1_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 3.5e-45
Identity = 85/102 (83.33%), Postives = 92/102 (90.20%), Query Frame = 1


Query: 2   AQIRADSMATERLGIKVEKNPPESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGK 61
           A IRA+SMATE+LGI +EKNPPESKLT+LGVR WPKWGC PSKFPWTYS KETCYLL+GK
Sbjct: 34  AAIRAESMATEKLGITIEKNPPESKLTQLGVRSWPKWGCPPSKFPWTYSAKETCYLLQGK 93

Query: 62  VKVTPAGSDEGVEIGAGDLVVFPAGMSCTWDVSIAVDKHYKF 104
           VKV P GSDEGVEI AGD VVFP GMSCTWDVS+AVDKHY+F
Sbjct: 94  VKVYPNGSDEGVEIEAGDFVVFPKGMSCTWDVSVAVDKHYQF 135

[Close]

BLAST of Cp4.1LG06g09780 vs. TrEMBL
Match: V4KKY3_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10029059mg PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 3.5e-45
Identity = 85/103 (82.52%), Postives = 92/103 (89.32%), Query Frame = 1


Query: 1   MAQIRADSMATERLGIKVEKNPPESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEG 60
           MA IRA+SMATE+LGI +EKNPPESKLT+LGVR WPKWGC PSKFPWTYS KETCYLL+G
Sbjct: 33  MAAIRAESMATEKLGILIEKNPPESKLTQLGVRNWPKWGCPPSKFPWTYSAKETCYLLQG 92

Query: 61  KVKVTPAGSDEGVEIGAGDLVVFPAGMSCTWDVSIAVDKHYKF 104
           KVKV P GSDEGVEI AGD VVFP GMSCTWDVS+ VDKHY+F
Sbjct: 93  KVKVYPDGSDEGVEIEAGDFVVFPKGMSCTWDVSVTVDKHYQF 135

[Close]

BLAST of Cp4.1LG06g09780 vs. TrEMBL
Match: A0A087GQ48_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA6G187000 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 3.5e-45
Identity = 85/103 (82.52%), Postives = 93/103 (90.29%), Query Frame = 1


Query: 1   MAQIRADSMATERLGIKVEKNPPESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEG 60
           MA IRA+S+ATE+LGI VEKNPPESKLT+LGVR WPKWGC PSKFPWTYS KETCYLLEG
Sbjct: 1   MAAIRAESIATEKLGIFVEKNPPESKLTQLGVRNWPKWGCAPSKFPWTYSAKETCYLLEG 60

Query: 61  KVKVTPAGSDEGVEIGAGDLVVFPAGMSCTWDVSIAVDKHYKF 104
           KVKV P GS+EGVEI AGD +VFP GMSCTWDVS+AVDKHY+F
Sbjct: 61  KVKVYPDGSEEGVEIEAGDFIVFPKGMSCTWDVSVAVDKHYQF 103

[Close]

BLAST of Cp4.1LG06g09780 vs. TAIR10
Match: AT4G10300.1 (AT4G10300.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 180.3 bits (456), Expect = 6.3e-46
Identity = 83/102 (81.37%), Postives = 90/102 (88.24%), Query Frame = 1


Query: 2   AQIRADSMATERLGIKVEKNPPESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGK 61
           A IRA+S  TE+LGI +EKNPPESKLT+LGVR WPKWGC PSKFPWTYS KETCYLL+GK
Sbjct: 34  AAIRAES--TEKLGITIEKNPPESKLTQLGVRSWPKWGCPPSKFPWTYSAKETCYLLQGK 93

Query: 62  VKVTPAGSDEGVEIGAGDLVVFPAGMSCTWDVSIAVDKHYKF 104
           VKV P GSDEGVEI AGD VVFP GMSCTWDVS+AVDKHY+F
Sbjct: 94  VKVYPNGSDEGVEIEAGDFVVFPKGMSCTWDVSVAVDKHYQF 133

[Close]

BLAST of Cp4.1LG06g09780 vs. TAIR10
Match: AT3G04300.1 (AT3G04300.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 126.7 bits (317), Expect = 8.3e-30
Identity = 52/90 (57.78%), Postives = 66/90 (73.33%), Query Frame = 1


Query: 14  LGIKVEKNPPESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSDEGV 73
           + I +E NP   +L++LGV  WPKW C P K+   + ++ETCYL++GKVKV P GS E V
Sbjct: 1   MNIVIENNPSSRRLSDLGVMSWPKWSCQPGKYALVFEERETCYLVKGKVKVYPKGSSEFV 60

Query: 74  EIGAGDLVVFPAGMSCTWDVSIAVDKHYKF 104
           E GAGDLV  P G+SCTWDVS+ +DKHYKF
Sbjct: 61  EFGAGDLVTIPKGLSCTWDVSLFIDKHYKF 90

[Close]

BLAST of Cp4.1LG06g09780 vs. TAIR10
Match: AT4G28703.1 (AT4G28703.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 112.8 bits (281), Expect = 1.2e-25
Identity = 54/104 (51.92%), Postives = 68/104 (65.38%), Query Frame = 1


Query: 9   MATERLGIKVEKNPPESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTP-- 68
           MA +   I VE+NP +++L EL  + WPKWGC P K+   Y  +E CY+L GKVKV P  
Sbjct: 1   MADQNPRIIVEQNPSQARLDELKFKSWPKWGCSPGKYHLKYEAEEICYILRGKVKVYPKP 60

Query: 69  ---AGSDEG----VEIGAGDLVVFPAGMSCTWDVSIAVDKHYKF 104
              + SD      VE GAGD+V FP G+SCTWDVS++VDKHY F
Sbjct: 61  PPSSSSDAEVEWCVEFGAGDIVTFPKGLSCTWDVSLSVDKHYIF 104

[Close]

BLAST of Cp4.1LG06g09780 vs. TAIR10
Match: AT4G10280.1 (AT4G10280.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 98.2 bits (243), Expect = 3.1e-21
Identity = 48/105 (45.71%), Postives = 64/105 (60.95%), Query Frame = 1


Query: 1   MAQIRADS-MATERLGIKVEKNPPESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLE 60
           +  + +DS + TE  G+K+ +   ++KL +LGV  WPKW   PSKFPW +   ET Y +E
Sbjct: 32  IVSVSSDSEIPTEIHGVKILRQASDTKLAQLGVASWPKWEGAPSKFPWEFKKTETIYFME 91

Query: 61  GKVKVTPAGSD---EGVEIGAGDLVVFPAGMSCTWDVSIAVDKHY 102
           GKVKV   G D   E  EIG GD+VVFP  M   W+++ AV K Y
Sbjct: 92  GKVKVNVDGYDEEEETFEIGKGDVVVFPKDMKVVWEITEAVKKQY 136

[Close]

BLAST of Cp4.1LG06g09780 vs. TAIR10
Match: AT4G10290.1 (AT4G10290.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 79.3 bits (194), Expect = 1.5e-15
Identity = 44/101 (43.56%), Postives = 54/101 (53.47%), Query Frame = 1


Query: 4   IRADSMATERLGIKVEKNPPESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVK 63
           I A  + TE  G+KV +   ++KL ELGV  W  W   P KFPW +   ET Y +EGK+K
Sbjct: 8   IFAPEVPTEIHGVKVMRQTSDAKLAELGVTSWQLWESMPRKFPWKFKKTETMYFVEGKLK 67

Query: 64  VTPAG---SDEGVEIGAGDLVVFPAGMSCTWDVSIAVDKHY 102
           V         E +E  AGDLVVFP  M+   DV   V K Y
Sbjct: 68  VKVEDHHKEGEALEFVAGDLVVFPQDMNVFVDVIEDVKKRY 108

[Close]

BLAST of Cp4.1LG06g09780 vs. NCBI nr
Match: gi|659119135|ref|XP_008459495.1| (PREDICTED: uncharacterized protein LOC103498612 [Cucumis melo])

HSP 1 Score: 209.9 bits (533), Expect = 2.1e-51
Identity = 96/102 (94.12%), Postives = 98/102 (96.08%), Query Frame = 1


Query: 3   QIRADSMATERLGIKVEKNPPESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKV 62
           QIRADSMATERLGIKVEKNP ESKL+ELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKV
Sbjct: 37  QIRADSMATERLGIKVEKNPSESKLSELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKV 96

Query: 63  KVTPAGSDEGVEIGAGDLVVFPAGMSCTWDVSIAVDKHYKFG 105
           KVTPAGSDE VEIGAGDLVVFP GMSCTWDVS+AVDKHY FG
Sbjct: 97  KVTPAGSDESVEIGAGDLVVFPKGMSCTWDVSVAVDKHYNFG 138

[Close]

BLAST of Cp4.1LG06g09780 vs. NCBI nr
Match: gi|449447523|ref|XP_004141517.1| (PREDICTED: uncharacterized protein LOC101218376 [Cucumis sativus])

HSP 1 Score: 209.1 bits (531), Expect = 3.6e-51
Identity = 96/101 (95.05%), Postives = 98/101 (97.03%), Query Frame = 1


Query: 3   QIRADSMATERLGIKVEKNPPESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKV 62
           QIRADSMATERLGIKVEKNP ESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKV
Sbjct: 37  QIRADSMATERLGIKVEKNPSESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKV 96

Query: 63  KVTPAGSDEGVEIGAGDLVVFPAGMSCTWDVSIAVDKHYKF 104
           KVTPAGS+E VEIGAGDLVVFP GMSCTWDVS+AVDKHYKF
Sbjct: 97  KVTPAGSNESVEIGAGDLVVFPKGMSCTWDVSVAVDKHYKF 137

[Close]

BLAST of Cp4.1LG06g09780 vs. NCBI nr
Match: gi|729296097|ref|XP_010542415.1| (PREDICTED: uncharacterized protein LOC104815631 [Tarenaya hassleriana])

HSP 1 Score: 196.4 bits (498), Expect = 2.4e-47
Identity = 88/102 (86.27%), Postives = 96/102 (94.12%), Query Frame = 1


Query: 2   AQIRADSMATERLGIKVEKNPPESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGK 61
           A+IRA+SMATE+LGIK+EKNPPE++LTELGVR WPKWGC PSKFPWTYS KETC+LLEGK
Sbjct: 39  ARIRAESMATEKLGIKIEKNPPETRLTELGVRNWPKWGCPPSKFPWTYSAKETCFLLEGK 98

Query: 62  VKVTPAGSDEGVEIGAGDLVVFPAGMSCTWDVSIAVDKHYKF 104
           VKV P GSDEGVEIGAGDLVVFP GMSCTWDVS+AVDKHYKF
Sbjct: 99  VKVYPDGSDEGVEIGAGDLVVFPKGMSCTWDVSVAVDKHYKF 140

[Close]

BLAST of Cp4.1LG06g09780 vs. NCBI nr
Match: gi|568849055|ref|XP_006478291.1| (PREDICTED: uncharacterized protein LOC102607448 [Citrus sinensis])

HSP 1 Score: 192.6 bits (488), Expect = 3.5e-46
Identity = 86/104 (82.69%), Postives = 96/104 (92.31%), Query Frame = 1


Query: 4   IRADSMAT---ERLGIKVEKNPPESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEG 63
           +RA++M+T   E+LG+K+E+NPPESKLTELGVRQWPKWGC PSKFPWTYSDKETCYLLEG
Sbjct: 36  VRAEAMSTTTIEKLGVKIERNPPESKLTELGVRQWPKWGCPPSKFPWTYSDKETCYLLEG 95

Query: 64  KVKVTPAGSDEGVEIGAGDLVVFPAGMSCTWDVSIAVDKHYKFG 105
           KVKV P GS+EGVEIGAGDLVVFP GMSCTWDVS+ VDKHYKFG
Sbjct: 96  KVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSVGVDKHYKFG 139

[Close]

BLAST of Cp4.1LG06g09780 vs. NCBI nr
Match: gi|565461754|ref|XP_006288876.1| (hypothetical protein CARUB_v10002235mg [Capsella rubella])

HSP 1 Score: 191.0 bits (484), Expect = 1.0e-45
Identity = 87/103 (84.47%), Postives = 93/103 (90.29%), Query Frame = 1


Query: 1   MAQIRADSMATERLGIKVEKNPPESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEG 60
           MA IRA+SMATE+LGI VEKNPPESKLT+LGVR WPKWGC PSKFPWTYS KETCYLLEG
Sbjct: 33  MAAIRAESMATEKLGITVEKNPPESKLTQLGVRNWPKWGCPPSKFPWTYSAKETCYLLEG 92

Query: 61  KVKVTPAGSDEGVEIGAGDLVVFPAGMSCTWDVSIAVDKHYKF 104
           KVKV P GS+EGVEI AGD VVFP GMSCTWDVS+AVDKHY+F
Sbjct: 93  KVKVYPEGSEEGVEIEAGDFVVFPKGMSCTWDVSVAVDKHYQF 135

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g09780 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG06g09780 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVZ0_CUCSA	2.5e-51	95.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G646710 PE=4 SV=1	[more]
R0GXZ3_9BRAS	7.0e-46	84.47	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10002235mg PE=4 SV=1	[more]
Q8LEK1_ARATH	3.5e-45	83.33	Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1	[more]
V4KKY3_EUTSA	3.5e-45	82.52	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10029059mg PE=4 SV=1	[more]
A0A087GQ48_ARAAL	3.5e-45	82.52	Uncharacterized protein OS=Arabis alpina GN=AALP_AA6G187000 PE=4 SV=1	[more]

BLAST of Cp4.1LG06g09780 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G10300.1	6.3e-46	81.37	RmlC-like cupins superfamily protein	[more]
AT3G04300.1	8.3e-30	57.78	RmlC-like cupins superfamily protein	[more]
AT4G28703.1	1.2e-25	51.92	RmlC-like cupins superfamily protein	[more]
AT4G10280.1	3.1e-21	45.71	RmlC-like cupins superfamily protein	[more]
AT4G10290.1	1.5e-15	43.56	RmlC-like cupins superfamily protein	[more]

BLAST of Cp4.1LG06g09780 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119135\|ref\|XP_008459495.1\|	2.1e-51	94.12	PREDICTED: uncharacterized protein LOC103498612 [Cucumis melo]	[more]
gi\|449447523\|ref\|XP_004141517.1\|	3.6e-51	95.05	PREDICTED: uncharacterized protein LOC101218376 [Cucumis sativus]	[more]
gi\|729296097\|ref\|XP_010542415.1\|	2.4e-47	86.27	PREDICTED: uncharacterized protein LOC104815631 [Tarenaya hassleriana]	[more]
gi\|568849055\|ref\|XP_006478291.1\|	3.5e-46	82.69	PREDICTED: uncharacterized protein LOC102607448 [Citrus sinensis]	[more]
gi\|565461754\|ref\|XP_006288876.1\|	1.0e-45	84.47	hypothetical protein CARUB_v10002235mg [Capsella rubella]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR014710	RmlC-like_jellyroll
IPR011051	RmlC_Cupin_sf
IPR008579	DUF861_Cupin_3

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0000023	maltose metabolic process
biological_process	GO:0019252	starch biosynthetic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG06g09780.1	Cp4.1LG06g09780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008579	Domain of unknown function DUF861, cupin-3	PFAM	PF05899	Cupin_3	coord: 28..101 score: 1.3
IPR011051	RmlC-like cupin domain	unknown	SSF51182	RmlC-like cupins	coord: 26..94 score: 1.78
IPR014710	RmlC-like jelly roll fold	GENE3D	G3DSA:2.60.120.10		coord: 13..103 score: 3.6
None	No IPR available	PANTHER	PTHR33271	FAMILY NOT NAMED	coord: 1..103 score: 7.4
None	No IPR available	PANTHER	PTHR33271:SF6	SUBFAMILY NOT NAMED	coord: 1..103 score: 7.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG06g09780	Cucsa.237860	Cucumber (Gy14) v1	cgycpeB0630
Cp4.1LG06g09780	CmaCh09G012080	Cucurbita maxima (Rimu)	cmacpeB064
Cp4.1LG06g09780	CmoCh09G011990	Cucurbita moschata (Rifu)	cmocpeB035
Cp4.1LG06g09780	Cla012370	Watermelon (97103) v1	cpewmB759
Cp4.1LG06g09780	Csa5G646710	Cucumber (Chinese Long) v2	cpecuB792
Cp4.1LG06g09780	MELO3C022114	Melon (DHL92) v3.5.1	cpemeB708
Cp4.1LG06g09780	ClCG08G001910	Watermelon (Charleston Gray)	cpewcgB712
Cp4.1LG06g09780	CSPI05G30250	Wild cucumber (PI 183967)	cpecpiB792
Cp4.1LG06g09780	Lsi08G001900	Bottle gourd (USVL1VR-Ls)	cpelsiB650
Cp4.1LG06g09780	MELO3C022114.2	Melon (DHL92) v3.6.1	cpemedB842
Cp4.1LG06g09780	CsaV3_5G039360	Cucumber (Chinese Long) v3	cpecucB0980
Cp4.1LG06g09780	Bhi06G000111	Wax gourd	cpewgoB0974
Cp4.1LG06g09780	CsGy5G029640	Cucumber (Gy14) v2	cgybcpeB696

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG06g09780	Cucurbita pepo (Zucchini)	cpecpeB460
Cp4.1LG06g09780	Cucurbita maxima (Rimu)	cmacpeB505
Cp4.1LG06g09780	Cucurbita moschata (Rifu)	cmocpeB464
Cp4.1LG06g09780	Bottle gourd (USVL1VR-Ls)	cpelsiB632