CsGy5G017910 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTATTGGTCCATCTTCACCAAACATCCTTCCTTCTCCCCAAATTTTCTCCATCAAATCCTCACATTCATCCACCTTAATTTTTGTAAAGTTCAAAACTTTCATCCACACTATCATCTTCTCTCAATTTTGCCGATTGGCTCGAGCCATCTCCCGAGCCAAATCGACAGTGGTTCATATTCTAAAGAAAAGTTATCACTACAAGGACAAGAACAAGAACAAGATCTTTTTCGGTTCGTTTAGGCTCCATTACAATTGGTGTTCTTCCCATGTGATGCCCGTGCCCGATCCCATATGGGAATTAGGGCACTTTTACTACGACCATGCTACCTCCACAGCTGCCGATGGCTCGCAACTGTCTGGATATTTGCAGTGGTTGGAAGAGAGAAAATTGGAGAGTGAAACAATGACGACGGCAACGGGAACAACGGCAGAAATGAATGAGATCGACAAATTGGCGGAGATGTTCATTGCAAGCTGCCATGAGAAATTCAGGTTGGAGAAACAAGAATCTGCTAGGAGATTTCAAGCAATGATGGCTAGAAGCATGTGAAAGCAAAACAGAATTGAGAAAGAAAACAAAGAATAGTTGAAAGGTTTTTGGGGATTGGGAAATTATTAAATAGATGAAGGTGAGTTTGGAGGGGGTGTGTGGTAATGTTTTTGTGAAATTATTATTGTTTAATGTAAATTATTTGGGGGTGGAATCAATCATATTTTCATCATATCCAAACATTAAGCTACTTAATTAAATTAGTTTTCTTTAGGATATATAGTATGTGTTTTATCTTTTGAAATATTTCTCCATGTTTTAGAGTTACACAAGCTGCATGATCTACCAGCTTTGATATCATGATTATTTCTTACTTTTTTTTATTCCTTTAGAAATTTGGTTGATAAAATATTCAAAAGTGTTTCCAAAAAGCAAGATAAAGAACATCAACCACAGTTTTACTGGTCCAAAACCAAACCCCTTCAAATCCATTCAATTGCATAA ATGGCTATTGGTCCATCTTCACCAAACATCCTTCCTTCTCCCCAAATTTTCTCCATCAAATCCTCACATTCATCCACCTTAATTTTTGTAAAGTTCAAAACTTTCATCCACACTATCATCTTCTCTCAATTTTGCCGATTGGCTCGAGCCATCTCCCGAGCCAAATCGACAGTGGTTCATATTCTAAAGAAAAGTTATCACTACAAGGACAAGAACAAGAACAAGATCTTTTTCGGTTCGTTTAGGCTCCATTACAATTGGTGTTCTTCCCATGTGATGCCCGTGCCCGATCCCATATGGGAATTAGGGCACTTTTACTACGACCATGCTACCTCCACAGCTGCCGATGGCTCGCAACTGTCTGGATATTTGCAGTGGTTGGAAGAGAGAAAATTGGAGAGTGAAACAATGACGACGGCAACGGGAACAACGGCAGAAATGAATGAGATCGACAAATTGGCGGAGATGTTCATTGCAAGCTGCCATGAGAAATTCAGGTTGGAGAAACAAGAATCTGCTAGGAGATTTCAAGCAATGATGGCTAGAAGCATAAATTTGGTTGATAAAATATTCAAAAGTGTTTCCAAAAAGCAAGATAAAGAACATCAACCACAGTTTTACTGGTCCAAAACCAAACCCCTTCAAATCCATTCAATTGCATAA ATGGCTATTGGTCCATCTTCACCAAACATCCTTCCTTCTCCCCAAATTTTCTCCATCAAATCCTCACATTCATCCACCTTAATTTTTGTAAAGTTCAAAACTTTCATCCACACTATCATCTTCTCTCAATTTTGCCGATTGGCTCGAGCCATCTCCCGAGCCAAATCGACAGTGGTTCATATTCTAAAGAAAAGTTATCACTACAAGGACAAGAACAAGAACAAGATCTTTTTCGGTTCGTTTAGGCTCCATTACAATTGGTGTTCTTCCCATGTGATGCCCGTGCCCGATCCCATATGGGAATTAGGGCACTTTTACTACGACCATGCTACCTCCACAGCTGCCGATGGCTCGCAACTGTCTGGATATTTGCAGTGGTTGGAAGAGAGAAAATTGGAGAGTGAAACAATGACGACGGCAACGGGAACAACGGCAGAAATGAATGAGATCGACAAATTGGCGGAGATGTTCATTGCAAGCTGCCATGAGAAATTCAGGTTGGAGAAACAAGAATCTGCTAGGAGATTTCAAGCAATGATGGCTAGAAGCATAAATTTGGTTGATAAAATATTCAAAAGTGTTTCCAAAAAGCAAGATAAAGAACATCAACCACAGTTTTACTGGTCCAAAACCAAACCCCTTCAAATCCATTCAATTGCATAA MAIGPSSPNILPSPQIFSIKSSHSSTLIFVKFKTFIHTIIFSQFCRLARAISRAKSTVVHILKKSYHYKDKNKNKIFFGSFRLHYNWCSSHVMPVPDPIWELGHFYYDHATSTAADGSQLSGYLQWLEERKLESETMTTATGTTAEMNEIDKLAEMFIASCHEKFRLEKQESARRFQAMMARSINLVDKIFKSVSKKQDKEHQPQFYWSKTKPLQIHSIA
BLAST of CsGy5G017910 vs. NCBI nr
Match: XP_011655408.1 (PREDICTED: uncharacterized protein LOC105435523 [Cucumis sativus] >KGN51368.1 hypothetical protein Csa_5G523130 [Cucumis sativus]) HSP 1 Score: 366.7 bits (940), Expect = 5.5e-98 Identity = 183/184 (99.46%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of CsGy5G017910 vs. NCBI nr
Match: XP_008458796.1 (PREDICTED: uncharacterized protein LOC103498096 [Cucumis melo]) HSP 1 Score: 312.4 bits (799), Expect = 1.2e-81 Identity = 162/185 (87.57%), Postives = 163/185 (88.11%), Query Frame = 0
BLAST of CsGy5G017910 vs. NCBI nr
Match: XP_022961611.1 (uncharacterized protein LOC111462262 [Cucurbita moschata]) HSP 1 Score: 288.1 bits (736), Expect = 2.5e-74 Identity = 147/180 (81.67%), Postives = 158/180 (87.78%), Query Frame = 0
BLAST of CsGy5G017910 vs. NCBI nr
Match: XP_023548199.1 (uncharacterized protein LOC111806908 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023548209.1 uncharacterized protein LOC111806908 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 287.0 bits (733), Expect = 5.6e-74 Identity = 149/181 (82.32%), Postives = 160/181 (88.40%), Query Frame = 0
BLAST of CsGy5G017910 vs. NCBI nr
Match: XP_022991048.1 (uncharacterized protein LOC111487754 [Cucurbita maxima]) HSP 1 Score: 283.5 bits (724), Expect = 6.2e-73 Identity = 145/180 (80.56%), Postives = 159/180 (88.33%), Query Frame = 0
BLAST of CsGy5G017910 vs. TAIR10
Match: AT3G57950.1 (unknown protein) HSP 1 Score: 123.6 bits (309), Expect = 1.5e-28 Identity = 71/163 (43.56%), Postives = 91/163 (55.83%), Query Frame = 0
BLAST of CsGy5G017910 vs. TAIR10
Match: AT5G06790.1 (unknown protein) HSP 1 Score: 116.3 bits (290), Expect = 2.4e-26 Identity = 78/179 (43.58%), Postives = 98/179 (54.75%), Query Frame = 0
BLAST of CsGy5G017910 vs. TAIR10
Match: AT2G42180.1 (unknown protein) HSP 1 Score: 78.2 bits (191), Expect = 7.1e-15 Identity = 67/180 (37.22%), Postives = 90/180 (50.00%), Query Frame = 0
BLAST of CsGy5G017910 vs. TrEMBL
Match: tr|A0A0A0KP26|A0A0A0KP26_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G523130 PE=4 SV=1) HSP 1 Score: 366.7 bits (940), Expect = 3.7e-98 Identity = 183/184 (99.46%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of CsGy5G017910 vs. TrEMBL
Match: tr|A0A1S3C8P2|A0A1S3C8P2_CUCME (uncharacterized protein LOC103498096 OS=Cucumis melo OX=3656 GN=LOC103498096 PE=4 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 8.2e-82 Identity = 162/185 (87.57%), Postives = 163/185 (88.11%), Query Frame = 0
BLAST of CsGy5G017910 vs. TrEMBL
Match: tr|A0A2P4ML47|A0A2P4ML47_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_12481 PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 2.8e-45 Identity = 109/197 (55.33%), Postives = 136/197 (69.04%), Query Frame = 0
BLAST of CsGy5G017910 vs. TrEMBL
Match: tr|A0A1Q3B7W6|A0A1Q3B7W6_CEPFO (DUF761 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_07462 PE=4 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 5.2e-44 Identity = 107/199 (53.77%), Postives = 134/199 (67.34%), Query Frame = 0
BLAST of CsGy5G017910 vs. TrEMBL
Match: tr|A0A2I4HNV1|A0A2I4HNV1_9ROSI (uncharacterized protein LOC109019910 OS=Juglans regia OX=51240 GN=LOC109019910 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 8.3e-42 Identity = 103/191 (53.93%), Postives = 131/191 (68.59%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|