Cp4.1LG01g23400 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCTCCATCTTCACCAAACATCCTTCCTTCTCTCCAAGTTTTCTCCCTCAAATCCTCTAATTCTTCTACCTTATTTCTTGTCAAATTCAAATCTTTCCTTCACACTATCATCTTCTCTCATTTGTGTCGGTTGGCTCGGGCGATTTCCCGAGCTAAGTCGACGGTGGTTCGGGTTTTGAAGAAAAATTATCACTACACGAATAGAAACAAGAACAAGATCTTTTTCGGGTCGTTTAGACTTCATTATAATTGGTGTTCTTCCCATGTGATGCCTGTGCCTGACCCCGTGTGGGAAGGTCATTTTTACTACGACGCTGCCACTGCGGACAGCTCGCAGCTGTCCGGGTATTTGCAATGGTTGGAGGAGAGGAAATTAGAGAGCGAGACGGCGGCGGGGGTGACGACGACGATGGCAACGGAGATGAATGAGATCGACAAATTGGCGGAGATGTTCATAGCAAGCTGCCATGAGAAATTTAGGCTGGAGAAACAGGAATCCGCTAGAAGATTTCAAGAGATGATGGCTAGAAGCATGTGA ATGGCTGCTCCATCTTCACCAAACATCCTTCCTTCTCTCCAAGTTTTCTCCCTCAAATCCTCTAATTCTTCTACCTTATTTCTTGTCAAATTCAAATCTTTCCTTCACACTATCATCTTCTCTCATTTGTGTCGGTTGGCTCGGGCGATTTCCCGAGCTAAGTCGACGGTGGTTCGGGTTTTGAAGAAAAATTATCACTACACGAATAGAAACAAGAACAAGATCTTTTTCGGGTCGTTTAGACTTCATTATAATTGGTGTTCTTCCCATGTGATGCCTGTGCCTGACCCCGTGTGGGAAGGTCATTTTTACTACGACGCTGCCACTGCGGACAGCTCGCAGCTGTCCGGGTATTTGCAATGGTTGGAGGAGAGGAAATTAGAGAGCGAGACGGCGGCGGGGGTGACGACGACGATGGCAACGGAGATGAATGAGATCGACAAATTGGCGGAGATGTTCATAGCAAGCTGCCATGAGAAATTTAGGCTGGAGAAACAGGAATCCGCTAGAAGATTTCAAGAGATGATGGCTAGAAGCATGTGA ATGGCTGCTCCATCTTCACCAAACATCCTTCCTTCTCTCCAAGTTTTCTCCCTCAAATCCTCTAATTCTTCTACCTTATTTCTTGTCAAATTCAAATCTTTCCTTCACACTATCATCTTCTCTCATTTGTGTCGGTTGGCTCGGGCGATTTCCCGAGCTAAGTCGACGGTGGTTCGGGTTTTGAAGAAAAATTATCACTACACGAATAGAAACAAGAACAAGATCTTTTTCGGGTCGTTTAGACTTCATTATAATTGGTGTTCTTCCCATGTGATGCCTGTGCCTGACCCCGTGTGGGAAGGTCATTTTTACTACGACGCTGCCACTGCGGACAGCTCGCAGCTGTCCGGGTATTTGCAATGGTTGGAGGAGAGGAAATTAGAGAGCGAGACGGCGGCGGGGGTGACGACGACGATGGCAACGGAGATGAATGAGATCGACAAATTGGCGGAGATGTTCATAGCAAGCTGCCATGAGAAATTTAGGCTGGAGAAACAGGAATCCGCTAGAAGATTTCAAGAGATGATGGCTAGAAGCATGTGA MAAPSSPNILPSLQVFSLKSSNSSTLFLVKFKSFLHTIIFSHLCRLARAISRAKSTVVRVLKKNYHYTNRNKNKIFFGSFRLHYNWCSSHVMPVPDPVWEGHFYYDAATADSSQLSGYLQWLEERKLESETAAGVTTTMATEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARSM
BLAST of Cp4.1LG01g23400 vs. TrEMBL
Match: A0A0A0KP26_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G523130 PE=4 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 2.8e-74 Identity = 150/181 (82.87%), Postives = 160/181 (88.40%), Query Frame = 1
BLAST of Cp4.1LG01g23400 vs. TrEMBL
Match: F6HLK1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g06340 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 1.1e-41 Identity = 103/195 (52.82%), Postives = 129/195 (66.15%), Query Frame = 1
BLAST of Cp4.1LG01g23400 vs. TrEMBL
Match: A5BGP1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031369 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 1.1e-41 Identity = 103/195 (52.82%), Postives = 129/195 (66.15%), Query Frame = 1
BLAST of Cp4.1LG01g23400 vs. TrEMBL
Match: A0A061EXE2_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_024889 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 1.4e-41 Identity = 107/207 (51.69%), Postives = 132/207 (63.77%), Query Frame = 1
BLAST of Cp4.1LG01g23400 vs. TrEMBL
Match: A0A067E8F9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g048155mg PE=4 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 3.1e-41 Identity = 104/206 (50.49%), Postives = 131/206 (63.59%), Query Frame = 1
BLAST of Cp4.1LG01g23400 vs. TAIR10
Match: AT3G57950.1 (AT3G57950.1 unknown protein) HSP 1 Score: 135.2 bits (339), Expect = 4.0e-32 Identity = 80/180 (44.44%), Postives = 107/180 (59.44%), Query Frame = 1
BLAST of Cp4.1LG01g23400 vs. TAIR10
Match: AT5G06790.1 (AT5G06790.1 unknown protein) HSP 1 Score: 120.9 bits (302), Expect = 7.8e-28 Identity = 85/203 (41.87%), Postives = 108/203 (53.20%), Query Frame = 1
BLAST of Cp4.1LG01g23400 vs. TAIR10
Match: AT2G42180.1 (AT2G42180.1 unknown protein) HSP 1 Score: 82.8 bits (203), Expect = 2.4e-16 Identity = 69/176 (39.20%), Postives = 94/176 (53.41%), Query Frame = 1
BLAST of Cp4.1LG01g23400 vs. NCBI nr
Match: gi|778703677|ref|XP_011655408.1| (PREDICTED: uncharacterized protein LOC105435523 [Cucumis sativus]) HSP 1 Score: 286.2 bits (731), Expect = 4.0e-74 Identity = 150/181 (82.87%), Postives = 160/181 (88.40%), Query Frame = 1
BLAST of Cp4.1LG01g23400 vs. NCBI nr
Match: gi|659117803|ref|XP_008458796.1| (PREDICTED: uncharacterized protein LOC103498096 [Cucumis melo]) HSP 1 Score: 282.3 bits (721), Expect = 5.8e-73 Identity = 145/181 (80.11%), Postives = 156/181 (86.19%), Query Frame = 1
BLAST of Cp4.1LG01g23400 vs. NCBI nr
Match: gi|1000937323|ref|XP_015583971.1| (PREDICTED: uncharacterized protein LOC8261025 [Ricinus communis]) HSP 1 Score: 179.5 bits (454), Expect = 5.3e-42 Identity = 109/209 (52.15%), Postives = 136/209 (65.07%), Query Frame = 1
BLAST of Cp4.1LG01g23400 vs. NCBI nr
Match: gi|147864063|emb|CAN83225.1| (hypothetical protein VITISV_031369 [Vitis vinifera]) HSP 1 Score: 177.9 bits (450), Expect = 1.5e-41 Identity = 103/195 (52.82%), Postives = 129/195 (66.15%), Query Frame = 1
BLAST of Cp4.1LG01g23400 vs. NCBI nr
Match: gi|731400288|ref|XP_002275264.2| (PREDICTED: uncharacterized protein LOC100264119 [Vitis vinifera]) HSP 1 Score: 177.9 bits (450), Expect = 1.5e-41 Identity = 103/195 (52.82%), Postives = 129/195 (66.15%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |