Cp4.1LG13g09180 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCTCCATCTCCTCTCCAAATTTTCTCACTCAAATCCTCGCATTCTTCCACCTTAATTTTCCTAAAGTTCAAAACTTTCATCCACACTATCCTCTTCTCTCACTTATGTCGCTTGGCTCGACCCATCTTCCGAGCCAAGTCGAGGGTCGTTCAAATTCTAAAGAGAAGTTATCGCTTCAAGAACAAGAACAAGAACAAGCTCATTTTCGGGTCGTTTAGACTCCACTACAACTGGTGCTCTTCCCACGTAATGCCCGTTCCCGATCCAACGTGGGAAGGGCATGTTGACTACGACCATGCTGCTGCAGCTTCCACCCCGGACAGCCCACAGCTGTCCGGGTATTTGCAGTGGCTGGAGGAGAGAAAATTAGAGGGCGAACCGACGACGACGGAGGTGAACGAGATCGACAAATTGGCGGAGATGTTCATTGCAAGATGCCATGAGAAATTCAGGCTGGAGAAACAGGAATCTGCTAGAAGGTTTCAAGAGATGATGGCTAGAAGCATGTGA ATGGCTGCTCCATCTCCTCTCCAAATTTTCTCACTCAAATCCTCGCATTCTTCCACCTTAATTTTCCTAAAGTTCAAAACTTTCATCCACACTATCCTCTTCTCTCACTTATGTCGCTTGGCTCGACCCATCTTCCGAGCCAAGTCGAGGGTCGTTCAAATTCTAAAGAGAAGTTATCGCTTCAAGAACAAGAACAAGAACAAGCTCATTTTCGGGTCGTTTAGACTCCACTACAACTGGTGCTCTTCCCACGTAATGCCCGTTCCCGATCCAACGTGGGAAGGGCATGTTGACTACGACCATGCTGCTGCAGCTTCCACCCCGGACAGCCCACAGCTGTCCGGGTATTTGCAGTGGCTGGAGGAGAGAAAATTAGAGGGCGAACCGACGACGACGGAGGTGAACGAGATCGACAAATTGGCGGAGATGTTCATTGCAAGATGCCATGAGAAATTCAGGCTGGAGAAACAGGAATCTGCTAGAAGGTTTCAAGAGATGATGGCTAGAAGCATGTGA ATGGCTGCTCCATCTCCTCTCCAAATTTTCTCACTCAAATCCTCGCATTCTTCCACCTTAATTTTCCTAAAGTTCAAAACTTTCATCCACACTATCCTCTTCTCTCACTTATGTCGCTTGGCTCGACCCATCTTCCGAGCCAAGTCGAGGGTCGTTCAAATTCTAAAGAGAAGTTATCGCTTCAAGAACAAGAACAAGAACAAGCTCATTTTCGGGTCGTTTAGACTCCACTACAACTGGTGCTCTTCCCACGTAATGCCCGTTCCCGATCCAACGTGGGAAGGGCATGTTGACTACGACCATGCTGCTGCAGCTTCCACCCCGGACAGCCCACAGCTGTCCGGGTATTTGCAGTGGCTGGAGGAGAGAAAATTAGAGGGCGAACCGACGACGACGGAGGTGAACGAGATCGACAAATTGGCGGAGATGTTCATTGCAAGATGCCATGAGAAATTCAGGCTGGAGAAACAGGAATCTGCTAGAAGGTTTCAAGAGATGATGGCTAGAAGCATGTGA MAAPSPLQIFSLKSSHSSTLIFLKFKTFIHTILFSHLCRLARPIFRAKSRVVQILKRSYRFKNKNKNKLIFGSFRLHYNWCSSHVMPVPDPTWEGHVDYDHAAAASTPDSPQLSGYLQWLEERKLEGEPTTTEVNEIDKLAEMFIARCHEKFRLEKQESARRFQEMMARSM
BLAST of Cp4.1LG13g09180 vs. TrEMBL
Match: A0A0A0KP26_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G523130 PE=4 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 6.5e-65 Identity = 135/175 (77.14%), Postives = 145/175 (82.86%), Query Frame = 1
BLAST of Cp4.1LG13g09180 vs. TrEMBL
Match: A0A067E8F9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g048155mg PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 6.6e-41 Identity = 103/194 (53.09%), Postives = 131/194 (67.53%), Query Frame = 1
BLAST of Cp4.1LG13g09180 vs. TrEMBL
Match: V4SQU7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012846mg PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 6.6e-41 Identity = 103/194 (53.09%), Postives = 131/194 (67.53%), Query Frame = 1
BLAST of Cp4.1LG13g09180 vs. TrEMBL
Match: A5BGP1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031369 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 2.5e-40 Identity = 98/183 (53.55%), Postives = 121/183 (66.12%), Query Frame = 1
BLAST of Cp4.1LG13g09180 vs. TrEMBL
Match: F6HLK1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g06340 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 2.5e-40 Identity = 98/183 (53.55%), Postives = 121/183 (66.12%), Query Frame = 1
BLAST of Cp4.1LG13g09180 vs. TAIR10
Match: AT3G57950.1 (AT3G57950.1 unknown protein) HSP 1 Score: 122.1 bits (305), Expect = 3.3e-28 Identity = 80/183 (43.72%), Postives = 104/183 (56.83%), Query Frame = 1
BLAST of Cp4.1LG13g09180 vs. TAIR10
Match: AT5G06790.1 (AT5G06790.1 unknown protein) HSP 1 Score: 118.6 bits (296), Expect = 3.7e-27 Identity = 80/190 (42.11%), Postives = 102/190 (53.68%), Query Frame = 1
BLAST of Cp4.1LG13g09180 vs. TAIR10
Match: AT2G42180.1 (AT2G42180.1 unknown protein) HSP 1 Score: 77.8 bits (190), Expect = 7.2e-15 Identity = 69/184 (37.50%), Postives = 94/184 (51.09%), Query Frame = 1
BLAST of Cp4.1LG13g09180 vs. NCBI nr
Match: gi|778703677|ref|XP_011655408.1| (PREDICTED: uncharacterized protein LOC105435523 [Cucumis sativus]) HSP 1 Score: 255.0 bits (650), Expect = 9.4e-65 Identity = 135/175 (77.14%), Postives = 145/175 (82.86%), Query Frame = 1
BLAST of Cp4.1LG13g09180 vs. NCBI nr
Match: gi|659117803|ref|XP_008458796.1| (PREDICTED: uncharacterized protein LOC103498096 [Cucumis melo]) HSP 1 Score: 248.8 bits (634), Expect = 6.7e-63 Identity = 131/172 (76.16%), Postives = 140/172 (81.40%), Query Frame = 1
BLAST of Cp4.1LG13g09180 vs. NCBI nr
Match: gi|567874515|ref|XP_006429847.1| (hypothetical protein CICLE_v10012846mg [Citrus clementina]) HSP 1 Score: 175.3 bits (443), Expect = 9.4e-41 Identity = 103/194 (53.09%), Postives = 131/194 (67.53%), Query Frame = 1
BLAST of Cp4.1LG13g09180 vs. NCBI nr
Match: gi|147864063|emb|CAN83225.1| (hypothetical protein VITISV_031369 [Vitis vinifera]) HSP 1 Score: 173.3 bits (438), Expect = 3.6e-40 Identity = 98/183 (53.55%), Postives = 121/183 (66.12%), Query Frame = 1
BLAST of Cp4.1LG13g09180 vs. NCBI nr
Match: gi|731400288|ref|XP_002275264.2| (PREDICTED: uncharacterized protein LOC100264119 [Vitis vinifera]) HSP 1 Score: 173.3 bits (438), Expect = 3.6e-40 Identity = 98/183 (53.55%), Postives = 121/183 (66.12%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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