CmaCh15G003550 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAATGGCTTCTCCATCTCCTCTCCAAATTTTCTCACTCAAATCCTCGCGTTCTTCCACCTTAATTTTCGTAAAGTTCAAAACTTTCATCCACACTATCCTCTTCTCTCACTTATGTCGCTTGGCTCGACCGATCTTTCGAGCCAAGTCGACAGTCGTTCAAATTCTAAAGAGAAGCAATCACTTCAAGAACAAGAACAAGAACAAGCTCATTTTCGGGTCGTTTAGACTCCACTACAACTGGTGCTCTTCCCACGTAATGCCCGTTCTCGATCCCACGTGGGAAGGGCATGTTGACTACAACCATGCTGCTGCAGCTTCCACCCCGGACAGCCCACAGCTGTCCGGGTATTTGCAGTGGCTGGAGGAGAGAAAATTAGAGGGCGAACCGACGATGACGACGACGACGACGACGACGGAGGTGAACGAGATCGACAAATTAGCGGAGATGTTCATTGCAAGATGCCACGAGAAATTCAGGCTGGAGAAACAGGAATCGGCTAGAAGGTTTGAAGAGATGATTGCTAGAAGCATGTGA ATGAAAATGGCTTCTCCATCTCCTCTCCAAATTTTCTCACTCAAATCCTCGCGTTCTTCCACCTTAATTTTCGTAAAGTTCAAAACTTTCATCCACACTATCCTCTTCTCTCACTTATGTCGCTTGGCTCGACCGATCTTTCGAGCCAAGTCGACAGTCGTTCAAATTCTAAAGAGAAGCAATCACTTCAAGAACAAGAACAAGAACAAGCTCATTTTCGGGTCGTTTAGACTCCACTACAACTGGTGCTCTTCCCACGTAATGCCCGTTCTCGATCCCACGTGGGAAGGGCATGTTGACTACAACCATGCTGCTGCAGCTTCCACCCCGGACAGCCCACAGCTGTCCGGGTATTTGCAGTGGCTGGAGGAGAGAAAATTAGAGGGCGAACCGACGATGACGACGACGACGACGACGACGGAGGTGAACGAGATCGACAAATTAGCGGAGATGTTCATTGCAAGATGCCACGAGAAATTCAGGCTGGAGAAACAGGAATCGGCTAGAAGGTTTGAAGAGATGATTGCTAGAAGCATGTGA ATGAAAATGGCTTCTCCATCTCCTCTCCAAATTTTCTCACTCAAATCCTCGCGTTCTTCCACCTTAATTTTCGTAAAGTTCAAAACTTTCATCCACACTATCCTCTTCTCTCACTTATGTCGCTTGGCTCGACCGATCTTTCGAGCCAAGTCGACAGTCGTTCAAATTCTAAAGAGAAGCAATCACTTCAAGAACAAGAACAAGAACAAGCTCATTTTCGGGTCGTTTAGACTCCACTACAACTGGTGCTCTTCCCACGTAATGCCCGTTCTCGATCCCACGTGGGAAGGGCATGTTGACTACAACCATGCTGCTGCAGCTTCCACCCCGGACAGCCCACAGCTGTCCGGGTATTTGCAGTGGCTGGAGGAGAGAAAATTAGAGGGCGAACCGACGATGACGACGACGACGACGACGACGGAGGTGAACGAGATCGACAAATTAGCGGAGATGTTCATTGCAAGATGCCACGAGAAATTCAGGCTGGAGAAACAGGAATCGGCTAGAAGGTTTGAAGAGATGATTGCTAGAAGCATGTGA MKMASPSPLQIFSLKSSRSSTLIFVKFKTFIHTILFSHLCRLARPIFRAKSTVVQILKRSNHFKNKNKNKLIFGSFRLHYNWCSSHVMPVLDPTWEGHVDYNHAAAASTPDSPQLSGYLQWLEERKLEGEPTMTTTTTTTEVNEIDKLAEMFIARCHEKFRLEKQESARRFEEMIARSM
BLAST of CmaCh15G003550 vs. TrEMBL
Match: A0A0A0KP26_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G523130 PE=4 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 6.8e-65 Identity = 134/175 (76.57%), Postives = 146/175 (83.43%), Query Frame = 1
BLAST of CmaCh15G003550 vs. TrEMBL
Match: V4SQU7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012846mg PE=4 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 1.7e-39 Identity = 99/201 (49.25%), Postives = 128/201 (63.68%), Query Frame = 1
BLAST of CmaCh15G003550 vs. TrEMBL
Match: A0A067E8F9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g048155mg PE=4 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 1.7e-39 Identity = 99/201 (49.25%), Postives = 128/201 (63.68%), Query Frame = 1
BLAST of CmaCh15G003550 vs. TrEMBL
Match: A5BGP1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031369 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 4.9e-39 Identity = 97/189 (51.32%), Postives = 124/189 (65.61%), Query Frame = 1
BLAST of CmaCh15G003550 vs. TrEMBL
Match: F6HLK1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g06340 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 4.9e-39 Identity = 97/189 (51.32%), Postives = 124/189 (65.61%), Query Frame = 1
BLAST of CmaCh15G003550 vs. TAIR10
Match: AT3G57950.1 (AT3G57950.1 unknown protein) HSP 1 Score: 122.1 bits (305), Expect = 3.5e-28 Identity = 79/191 (41.36%), Postives = 105/191 (54.97%), Query Frame = 1
BLAST of CmaCh15G003550 vs. TAIR10
Match: AT5G06790.1 (AT5G06790.1 unknown protein) HSP 1 Score: 112.8 bits (281), Expect = 2.1e-25 Identity = 76/206 (36.89%), Postives = 104/206 (50.49%), Query Frame = 1
BLAST of CmaCh15G003550 vs. TAIR10
Match: AT2G42180.1 (AT2G42180.1 unknown protein) HSP 1 Score: 72.8 bits (177), Expect = 2.4e-13 Identity = 65/184 (35.33%), Postives = 91/184 (49.46%), Query Frame = 1
BLAST of CmaCh15G003550 vs. NCBI nr
Match: gi|778703677|ref|XP_011655408.1| (PREDICTED: uncharacterized protein LOC105435523 [Cucumis sativus]) HSP 1 Score: 255.0 bits (650), Expect = 9.8e-65 Identity = 134/175 (76.57%), Postives = 146/175 (83.43%), Query Frame = 1
BLAST of CmaCh15G003550 vs. NCBI nr
Match: gi|659117803|ref|XP_008458796.1| (PREDICTED: uncharacterized protein LOC103498096 [Cucumis melo]) HSP 1 Score: 249.6 bits (636), Expect = 4.1e-63 Identity = 139/188 (73.94%), Postives = 150/188 (79.79%), Query Frame = 1
BLAST of CmaCh15G003550 vs. NCBI nr
Match: gi|567874515|ref|XP_006429847.1| (hypothetical protein CICLE_v10012846mg [Citrus clementina]) HSP 1 Score: 170.6 bits (431), Expect = 2.4e-39 Identity = 99/201 (49.25%), Postives = 128/201 (63.68%), Query Frame = 1
BLAST of CmaCh15G003550 vs. NCBI nr
Match: gi|731400288|ref|XP_002275264.2| (PREDICTED: uncharacterized protein LOC100264119 [Vitis vinifera]) HSP 1 Score: 169.5 bits (428), Expect = 5.4e-39 Identity = 101/197 (51.27%), Postives = 128/197 (64.97%), Query Frame = 1
BLAST of CmaCh15G003550 vs. NCBI nr
Match: gi|147864063|emb|CAN83225.1| (hypothetical protein VITISV_031369 [Vitis vinifera]) HSP 1 Score: 169.1 bits (427), Expect = 7.1e-39 Identity = 97/189 (51.32%), Postives = 124/189 (65.61%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |