CsGy5G008660 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGTGGAATAATCCTCGTACATAACCAATAGCTATTAGAGATGACCCAAATCCTCATATCACCATTCATTACTACAAACTAGTTATTTTCTCTCTTTCTTTCTTATTTCTTGGACCTTTTTCTCTTTCTACTTTTCTGGCTAATTTGATCTCAAGTGAAGATTAGAGCATGCTTGGATGTCCAAAGAAAGGTAAGAACAAACTCATCTCTTTCTTCTCTCAAAATTTCGAGCTGGAACTATTTTCGTTGAAGGTTCTTTCTTTTTCGTTCTTTACAATATAGTATTGCAATGTTGGAGAACAAGATTTGAAGCTTTTAACTTGTTTTTATCTGGGGAGGGTTAGAAACGATTTGTAGTTTTTATCTATTTCTTAAGATCTGATTTTTGTTAAAAGTTTTTGGAGTGAGGATTCAAGCTGCTTTCGGCTTGATAGAAAAAGTTACAATGTCTTTCTTGTTAGGTATATATATATATGCTCAATTTTGCTTGAAGGTTAGAACGGTGTGATGGGTAGAAAAGTTACTAAAATGACTAAACTATTGTGAGCTATGTTGGCCTATGGTATTGTATAGTTAAATATAGTATATTTCGATCTCGATCATATGCAACTAATTGTCTAGAGAAGGATTATATTTCGTTAGATCATTGAGAACTCATTCGGTAACCATTATATTATTTCATTTTTATCTTTTGAAAATCAATTTCATCGACACTACTTTTCACTTTACAGAATTATCTAACTTCTACATTTTTAAGAGAAATGGAGTAAAATTTAAAAAATTAAAAGCAAATAGTCTTTTAAACTTTGTTGCATGATATGAAATTAAGAGGAAATAGAGTTAATTTTTAAAAACTAAAAAACCTTATTATAAAATGGGAATAAACTTGACTACTTTTATTTTCTTCATCTTTGTTCTTTCGTGATGGTTTATACAGAGAGAGATTCGATGAGATAGCGAAGAAGATAAAGAGAGAGACAGATGTATCATCAAATATTCCTCCACAACAAATTATGGGGAGAAGACACTCATTGCAGGGTCCTCCTGGAGCTCTCAACACCATTACTCCATGCGCAGCCTGCAAACTTTTAAGACGAAGATGTGCTCAAGAGTGTCCCTTCTCCCCATACTTCTCTCCCCATGAGCCTCATAAATTTGCCTCAGTCCACAAGGTTTTTGGCGCAAGCAACGTCTCGAAGATGCTCATGGTAACACATGACTAAAAGTCGGTTATATTATAACTTTAGTTTTTTTGAACTTTTGGAGTACGTTAGTGTTTGTTTAGTATGTGGAAACAGTAAGTTTGAACTTTTGTAATTATGTCTTTCTTGTAGTTTAGAAAGTTTATTCTACACTATAAATCTTTTTACAGTATTAAAACTTAAAATTTCATCCCGAGTGCGTTATCAAACCATATAGCGATGAATTCTAACTTATAAATCATATGTATATAAATACTAAATTTATCAAAGTCATAGGAGCTAAGTTTGTGATTTAAAGTTCTAATTAATGATCTGGGTGTATTCCATTCACGTGTCTAATAAGTTTAGGAATGGAAGAAGTTGCAATTACATATATACTACCAACATTGTTTGCAGGAAGTTTCCGACAATCAAAGAGCGGATGCCGCAAACAGCTTAGTTTATGAAGCTAATGTGAGGTTAAGAGATCCTGTTTATGGTTGTATGGGTGCCATTTCAGCCCTACAACACCAGATTCAATCCTTACAAGCTGAGCTCAATGCTGTGAGAGCTGAGATCTTAAGACACAAATTTAGAGAAGCTAATAATATCATTCACTCTTCTCCTCAACAACAACATGTGCCTTTTCTTTCTTCTTCTTCTACGGTGGTTGTTTCGGTTGCCCTGCCACCACCGCCTCCGCCTCCACCGCTACCTCCGCCGCATCATCATGATGCTTCTTCTTCTTCTTCCTCTTTGTACAATCGACGGACGGTGGCAGCTGCGGCTGATTATAGTACTATTTCAAGTAATGAAAATGTTACCTACTTTGTTGGTACTTCTAGTACTGGTCATCAATTGAATTCTTAGCATTATAATTGTAGGGTTTAAAGAAACGCAATTTTACCTGTAATAAAATTGAAAGAAAAGTTGGGGTGAAATTCAAGACCCTCTTTTTTTGTATTTTTTTCCAAAATTACTTTAGGAATATTCTCGATGGCACACATTTTCATGTATTCTACCTTAGCATCTAATTACAAGTGATCA GGTGGAATAATCCTCGTACATAACCAATAGCTATTAGAGATGACCCAAATCCTCATATCACCATTCATTACTACAAACTAGTTATTTTCTCTCTTTCTTTCTTATTTCTTGGACCTTTTTCTCTTTCTACTTTTCTGGCTAATTTGATCTCAAGTGAAGATTAGAGCATGCTTGGATGTCCAAAGAAAGAGAGAGATTCGATGAGATAGCGAAGAAGATAAAGAGAGAGACAGATGTATCATCAAATATTCCTCCACAACAAATTATGGGGAGAAGACACTCATTGCAGGGTCCTCCTGGAGCTCTCAACACCATTACTCCATGCGCAGCCTGCAAACTTTTAAGACGAAGATGTGCTCAAGAGTGTCCCTTCTCCCCATACTTCTCTCCCCATGAGCCTCATAAATTTGCCTCAGTCCACAAGGTTTTTGGCGCAAGCAACGTCTCGAAGATGCTCATGGAAGTTTCCGACAATCAAAGAGCGGATGCCGCAAACAGCTTAGTTTATGAAGCTAATGTGAGGTTAAGAGATCCTGTTTATGGTTGTATGGGTGCCATTTCAGCCCTACAACACCAGATTCAATCCTTACAAGCTGAGCTCAATGCTGTGAGAGCTGAGATCTTAAGACACAAATTTAGAGAAGCTAATAATATCATTCACTCTTCTCCTCAACAACAACATGTGCCTTTTCTTTCTTCTTCTTCTACGGTGGTTGTTTCGGTTGCCCTGCCACCACCGCCTCCGCCTCCACCGCTACCTCCGCCGCATCATCATGATGCTTCTTCTTCTTCTTCCTCTTTGTACAATCGACGGACGGTGGCAGCTGCGGCTGATTATAGTACTATTTCAAGTAATGAAAATGTTACCTACTTTGTTGGTACTTCTAGTACTGGTCATCAATTGAATTCTTAGCATTATAATTGTAGGGTTTAAAGAAACGCAATTTTACCTGTAATAAAATTGAAAGAAAAGTTGGGGTGAAATTCAAGACCCTCTTTTTTTGTATTTTTTTCCAAAATTACTTTAGGAATATTCTCGATGGCACACATTTTCATGTATTCTACCTTAGCATCTAATTACAAGTGATCA ATGTCCAAAGAAAGAGAGAGATTCGATGAGATAGCGAAGAAGATAAAGAGAGAGACAGATGTATCATCAAATATTCCTCCACAACAAATTATGGGGAGAAGACACTCATTGCAGGGTCCTCCTGGAGCTCTCAACACCATTACTCCATGCGCAGCCTGCAAACTTTTAAGACGAAGATGTGCTCAAGAGTGTCCCTTCTCCCCATACTTCTCTCCCCATGAGCCTCATAAATTTGCCTCAGTCCACAAGGTTTTTGGCGCAAGCAACGTCTCGAAGATGCTCATGGAAGTTTCCGACAATCAAAGAGCGGATGCCGCAAACAGCTTAGTTTATGAAGCTAATGTGAGGTTAAGAGATCCTGTTTATGGTTGTATGGGTGCCATTTCAGCCCTACAACACCAGATTCAATCCTTACAAGCTGAGCTCAATGCTGTGAGAGCTGAGATCTTAAGACACAAATTTAGAGAAGCTAATAATATCATTCACTCTTCTCCTCAACAACAACATGTGCCTTTTCTTTCTTCTTCTTCTACGGTGGTTGTTTCGGTTGCCCTGCCACCACCGCCTCCGCCTCCACCGCTACCTCCGCCGCATCATCATGATGCTTCTTCTTCTTCTTCCTCTTTGTACAATCGACGGACGGTGGCAGCTGCGGCTGATTATAGTACTATTTCAAGTAATGAAAATGTTACCTACTTTGTTGGTACTTCTAGTACTGGTCATCAATTGAATTCTTAG MSKERERFDEIAKKIKRETDVSSNIPPQQIMGRRHSLQGPPGALNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVSDNQRADAANSLVYEANVRLRDPVYGCMGAISALQHQIQSLQAELNAVRAEILRHKFREANNIIHSSPQQQHVPFLSSSSTVVVSVALPPPPPPPPLPPPHHHDASSSSSSLYNRRTVAAAADYSTISSNENVTYFVGTSSTGHQLNS
BLAST of CsGy5G008660 vs. NCBI nr
Match: XP_004146476.1 (PREDICTED: LOB domain-containing protein 15 [Cucumis sativus] >KGN50723.1 hypothetical protein Csa_5G219380 [Cucumis sativus]) HSP 1 Score: 350.5 bits (898), Expect = 4.6e-93 Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0
BLAST of CsGy5G008660 vs. NCBI nr
Match: XP_008456927.1 (PREDICTED: LOB domain-containing protein 15 [Cucumis melo]) HSP 1 Score: 327.4 bits (838), Expect = 4.1e-86 Identity = 233/245 (95.10%), Postives = 237/245 (96.73%), Query Frame = 0
BLAST of CsGy5G008660 vs. NCBI nr
Match: XP_023544729.1 (LOB domain-containing protein 15-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 327.0 bits (837), Expect = 5.4e-86 Identity = 218/245 (88.98%), Postives = 225/245 (91.84%), Query Frame = 0
BLAST of CsGy5G008660 vs. NCBI nr
Match: XP_022942658.1 (LOB domain-containing protein 15-like [Cucurbita moschata]) HSP 1 Score: 323.9 bits (829), Expect = 4.6e-85 Identity = 217/245 (88.57%), Postives = 225/245 (91.84%), Query Frame = 0
BLAST of CsGy5G008660 vs. NCBI nr
Match: XP_022984247.1 (LOB domain-containing protein 15-like [Cucurbita maxima]) HSP 1 Score: 321.2 bits (822), Expect = 3.0e-84 Identity = 209/245 (85.31%), Postives = 218/245 (88.98%), Query Frame = 0
BLAST of CsGy5G008660 vs. TAIR10
Match: AT2G40470.1 (LOB domain-containing protein 15) HSP 1 Score: 246.5 bits (628), Expect = 1.7e-65 Identity = 124/157 (78.98%), Postives = 135/157 (85.99%), Query Frame = 0
BLAST of CsGy5G008660 vs. TAIR10
Match: AT2G30340.1 (LOB domain-containing protein 13) HSP 1 Score: 224.9 bits (572), Expect = 5.3e-59 Identity = 115/164 (70.12%), Postives = 132/164 (80.49%), Query Frame = 0
BLAST of CsGy5G008660 vs. TAIR10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein) HSP 1 Score: 154.5 bits (389), Expect = 8.7e-38 Identity = 75/112 (66.96%), Postives = 91/112 (81.25%), Query Frame = 0
BLAST of CsGy5G008660 vs. TAIR10
Match: AT1G31320.1 (LOB domain-containing protein 4) HSP 1 Score: 153.3 bits (386), Expect = 1.9e-37 Identity = 72/112 (64.29%), Postives = 91/112 (81.25%), Query Frame = 0
BLAST of CsGy5G008660 vs. TAIR10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein) HSP 1 Score: 146.4 bits (368), Expect = 2.4e-35 Identity = 65/109 (59.63%), Postives = 88/109 (80.73%), Query Frame = 0
BLAST of CsGy5G008660 vs. Swiss-Prot
Match: sp|Q8L5T5|LBD15_ARATH (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2) HSP 1 Score: 246.5 bits (628), Expect = 3.0e-64 Identity = 124/157 (78.98%), Postives = 135/157 (85.99%), Query Frame = 0
BLAST of CsGy5G008660 vs. Swiss-Prot
Match: sp|Q9AT61|LBD13_ARATH (LOB domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=LBD13 PE=1 SV=2) HSP 1 Score: 224.9 bits (572), Expect = 9.5e-58 Identity = 115/164 (70.12%), Postives = 132/164 (80.49%), Query Frame = 0
BLAST of CsGy5G008660 vs. Swiss-Prot
Match: sp|Q8LBW3|LBD12_ARATH (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2) HSP 1 Score: 154.5 bits (389), Expect = 1.6e-36 Identity = 75/112 (66.96%), Postives = 91/112 (81.25%), Query Frame = 0
BLAST of CsGy5G008660 vs. Swiss-Prot
Match: sp|Q9SHE9|LBD4_ARATH (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 3.5e-36 Identity = 72/112 (64.29%), Postives = 91/112 (81.25%), Query Frame = 0
BLAST of CsGy5G008660 vs. Swiss-Prot
Match: sp|O04479|AS2_ARATH (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 4.3e-34 Identity = 65/109 (59.63%), Postives = 88/109 (80.73%), Query Frame = 0
BLAST of CsGy5G008660 vs. TrEMBL
Match: tr|A0A0A0KM94|A0A0A0KM94_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G219380 PE=4 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 3.0e-93 Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0
BLAST of CsGy5G008660 vs. TrEMBL
Match: tr|A0A1S3C502|A0A1S3C502_CUCME (LOB domain-containing protein 15 OS=Cucumis melo OX=3656 GN=LOC103496729 PE=4 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 2.7e-86 Identity = 233/245 (95.10%), Postives = 237/245 (96.73%), Query Frame = 0
BLAST of CsGy5G008660 vs. TrEMBL
Match: tr|A0A2P5AHJ8|A0A2P5AHJ8_9ROSA (Wilm's tumor protein OS=Trema orientalis OX=63057 GN=TorRG33x02_350260 PE=4 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 5.7e-68 Identity = 136/159 (85.53%), Postives = 144/159 (90.57%), Query Frame = 0
BLAST of CsGy5G008660 vs. TrEMBL
Match: tr|A0A067JNV9|A0A067JNV9_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_03351 PE=4 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 1.3e-67 Identity = 136/160 (85.00%), Postives = 144/160 (90.00%), Query Frame = 0
BLAST of CsGy5G008660 vs. TrEMBL
Match: tr|A0A1R3KW59|A0A1R3KW59_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_03889 PE=4 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 1.7e-67 Identity = 137/160 (85.62%), Postives = 145/160 (90.62%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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