Cp4.1LG01g05690 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g05690
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLOB domain-containing protein, putative
LocationCp4.1LG01 : 546748 .. 547282 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCAAGCTCCTAAGAAGAAGATGTGGTCAACAATGTCCCTTCGCCCCATACTTCTCCCCCCACGAGCCTCACAAGTTCGCCTCGGTCCACAAGGTCTTCGGCGCCAGCAATGTCTCCAAGATGCTCAAGGTAACGGTAACGATAAGAATTTATTGATATAAAATTGAAAGTTTAAAGGCCGTGATAGAATATTTTTTTTTTACAGGAAGTTCCGAAAAATGAAAGAGATAATACTGCGAATAGTCTAATTTATGAAGCTAATGTGAGGCTGAGAGATCCTGTGTATGGCTGCATGGGCGCCATTTCATGTCTACAACACCAAGTCCAAGCGTTACAAGCTACACTCACTGCAGTTAGAGCTGAGATACTGAGATGCAAATATAGACAAGGTAATATGGTTTCCATTGCCCTACCACCACCGCCACCGCCGCCTCCCGAGCTACCTCCGCCGCCTCTTCAGGATGCTTCTTCCTCTTCCTCCACCTTGTACAACCGGCCCACGGTGGCCGCTGATTCATCCTTTTTCGCATTTTAG

mRNA sequence

TGCAAGCTCCTAAGAAGAAGATGTGGTCAACAATGTCCCTTCGCCCCATACTTCTCCCCCCACGAGCCTCACAAGTTCGCCTCGGTCCACAAGGTCTTCGGCGCCAGCAATGTCTCCAAGATGCTCAAGGAAGTTCCGAAAAATGAAAGAGATAATACTGCGAATAGTCTAATTTATGAAGCTAATGTGAGGCTGAGAGATCCTGTGTATGGCTGCATGGGCGCCATTTCATGTCTACAACACCAAGTCCAAGCGTTACAAGCTACACTCACTGCAGTTAGAGCTGAGATACTGAGATGCAAATATAGACAAGGTAATATGGTTTCCATTGCCCTACCACCACCGCCACCGCCGCCTCCCGAGCTACCTCCGCCGCCTCTTCAGGATGCTTCTTCCTCTTCCTCCACCTTGTACAACCGGCCCACGGTGGCCGCTGATTCATCCTTTTTCGCATTTTAG

Coding sequence (CDS)

TGCAAGCTCCTAAGAAGAAGATGTGGTCAACAATGTCCCTTCGCCCCATACTTCTCCCCCCACGAGCCTCACAAGTTCGCCTCGGTCCACAAGGTCTTCGGCGCCAGCAATGTCTCCAAGATGCTCAAGGAAGTTCCGAAAAATGAAAGAGATAATACTGCGAATAGTCTAATTTATGAAGCTAATGTGAGGCTGAGAGATCCTGTGTATGGCTGCATGGGCGCCATTTCATGTCTACAACACCAAGTCCAAGCGTTACAAGCTACACTCACTGCAGTTAGAGCTGAGATACTGAGATGCAAATATAGACAAGGTAATATGGTTTCCATTGCCCTACCACCACCGCCACCGCCGCCTCCCGAGCTACCTCCGCCGCCTCTTCAGGATGCTTCTTCCTCTTCCTCCACCTTGTACAACCGGCCCACGGTGGCCGCTGATTCATCCTTTTTCGCATTTTAG

Protein sequence

CKLLRRRCGQQCPFAPYFSPHEPHKFASVHKVFGASNVSKMLKEVPKNERDNTANSLIYEANVRLRDPVYGCMGAISCLQHQVQALQATLTAVRAEILRCKYRQGNMVSIALPPPPPPPPELPPPPLQDASSSSSTLYNRPTVAADSSFFAF
Homology
[Close]
BLAST of Cp4.1LG01g05690 vs. Swiss-Prot
Match: LBD15_ARATH (LOB domain-containing protein 15 OS=Arabidopsis thaliana GN=LBD15 PE=2 SV=2)

HSP 1 Score: 178.7 bits (452), Expect = 4.8e-44
Identity = 99/161 (61.49%), Postives = 116/161 (72.05%), Query Frame = 1 

Query: 1   CKLLRRRCGQQCPFAPYFSPHEPHKFASVHKVFGASNVSKMLKEVPKNERDNTANSLIYE 60
           CKLLRRRC Q+CPF+PYFSPHEPHKFASVHKVFGASNVSKML EVP+++R + ANSL+YE
Sbjct: 49  CKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYE 108

Query: 61  ANVRLRDPVYGCMGAISCLQHQVQALQATLTAVRAEILRCKYRQGNMVSIALPPPP---- 120
           ANVRLRDPVYGCMGAIS LQ QVQALQA LTAVR+EIL  KY+Q   V+  + P      
Sbjct: 109 ANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEIL--KYKQREAVATLIVPSNSQVA 168

Query: 121 -----------PPPPELPPPPLQDAS----SSSSTLYNRPT 143
                       PPP+ P  P Q  +    S SS ++++PT
Sbjct: 169 GFHNSGGVSVIAPPPQRPTTPPQPTTAHPPSPSSCVFSQPT 207

[Close]
BLAST of Cp4.1LG01g05690 vs. Swiss-Prot
Match: LBD13_ARATH (LOB domain-containing protein 13 OS=Arabidopsis thaliana GN=LBD13 PE=2 SV=2)

HSP 1 Score: 172.9 bits (437), Expect = 2.6e-42
Identity = 77/109 (70.64%), Postives = 95/109 (87.16%), Query Frame = 1 

Query: 1   CKLLRRRCGQQCPFAPYFSPHEPHKFASVHKVFGASNVSKMLKEVPKNERDNTANSLIYE 60
           CKLLRRRC ++CPF+PYFSPHEPHKFA+VHKVFGASNVSKML EV +++R + ANSL+YE
Sbjct: 56  CKLLRRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYE 115

Query: 61  ANVRLRDPVYGCMGAISCLQHQVQALQATLTAVRAEILRCKYRQGNMVS 110
           AN+RLRDP+YGCMGAIS LQH +Q+LQ+ LT VR EILR KY++   ++
Sbjct: 116 ANLRLRDPIYGCMGAISALQHHIQSLQSELTTVRTEILRHKYQEATTIT 164

[Close]
BLAST of Cp4.1LG01g05690 vs. Swiss-Prot
Match: LBD12_ARATH (LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2)

HSP 1 Score: 141.0 bits (354), Expect = 1.1e-32
Identity = 66/98 (67.35%), Postives = 79/98 (80.61%), Query Frame = 1 

Query: 1   CKLLRRRCGQQCPFAPYFSPHEPHKFASVHKVFGASNVSKMLKEVPKNERDNTANSLIYE 60
           CKLLRRRC + C FAPYF P +PHKFA VHKVFGASNVSKML+E+P ++R +  NSL++E
Sbjct: 12  CKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVNSLVFE 71

Query: 61  ANVRLRDPVYGCMGAISCLQHQVQALQATLTAVRAEIL 99
           AN R+RDPVYGC+GAIS LQ+QV  LQ  L   +AEIL
Sbjct: 72  ANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEIL 109

[Close]
BLAST of Cp4.1LG01g05690 vs. Swiss-Prot
Match: LBD4_ARATH (LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.1e-31
Identity = 66/118 (55.93%), Postives = 85/118 (72.03%), Query Frame = 1 

Query: 1   CKLLRRRCGQQCPFAPYFSPHEPHKFASVHKVFGASNVSKMLKEVPKNERDNTANSLIYE 60
           CKLLRRRC Q C F+PYF   EP KFA+VH+VFGASNV+KML+E+P ++R +  +S++YE
Sbjct: 17  CKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSMVYE 76

Query: 61  ANVRLRDPVYGCMGAISCLQHQVQALQATLTAVRAEILRCKYRQG-NMVSIALPPPPP 118
           AN R+RDPVYGC+GAIS LQ Q+  LQA L   +AE++  + RQ  N     L P  P
Sbjct: 77  ANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHGLCPDSP 134

[Close]
BLAST of Cp4.1LG01g05690 vs. Swiss-Prot
Match: LOB_ARATH (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana GN=LOB PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.9e-30
Identity = 72/148 (48.65%), Postives = 92/148 (62.16%), Query Frame = 1 

Query: 1   CKLLRRRCGQQCPFAPYFSPHEPHKFASVHKVFGASNVSKMLKEVPKNERDNTANSLIYE 60
           CK LRR+C   C FAPYF P EPHKFA+VHK+FGASNV+K+L E+  ++R++  NSL YE
Sbjct: 15  CKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYE 74

Query: 61  ANVRLRDPVYGCMGAISCLQHQVQALQATLTAVRAEILR------CKYRQGNMVSIALPP 120
           A  R+RDPVYGC+GAIS LQ QV  LQ  L A  A++             GN+V +   P
Sbjct: 75  AEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAGAPGNVVDLVFQP 134

Query: 121 PPPPPPELPP-PPLQDASSSSSTLYNRP 142
            P P  +LPP  P+   S +S  +   P
Sbjct: 135 QPLPSQQLPPLNPVYRLSGASPVMNQMP 162

[Close]
BLAST of Cp4.1LG01g05690 vs. TrEMBL
Match: A0A0A0KM94_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G219380 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.2e-54
Identity = 117/170 (68.82%), Postives = 131/170 (77.06%), Query Frame = 1 

Query: 1   CKLLRRRCGQQCPFAPYFSPHEPHKFASVHKVFGASNVSKMLKEVPKNERDNTANSLIYE 60
           CKLLRRRC Q+CPF+PYFSPHEPHKFASVHKVFGASNVSKML EV  N+R + ANSL+YE
Sbjct: 53  CKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVSDNQRADAANSLVYE 112

Query: 61  ANVRLRDPVYGCMGAISCLQHQVQALQATLTAVRAEILRCKYRQGN-------------- 120
           ANVRLRDPVYGCMGAIS LQHQ+Q+LQA L AVRAEILR K+R+ N              
Sbjct: 113 ANVRLRDPVYGCMGAISALQHQIQSLQAELNAVRAEILRHKFREANNIIHSSPQQQHVPF 172

Query: 121 -------MVSIALPPPPPPPPELPPPPLQDASSSSSTLYNRPTVAADSSF 150
                  +VS+ALPPPPPPPP LPPP   DASSSSS+LYNR TVAA + +
Sbjct: 173 LSSSSTVVVSVALPPPPPPPP-LPPPHHHDASSSSSSLYNRRTVAAAADY 221

[Close]
BLAST of Cp4.1LG01g05690 vs. TrEMBL
Match: A0A0B0NU48_GOSAR (LOB domain-containing 15-like protein OS=Gossypium arboreum GN=F383_01332 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.1e-51
Identity = 104/157 (66.24%), Postives = 126/157 (80.25%), Query Frame = 1 

Query: 1   CKLLRRRCGQQCPFAPYFSPHEPHKFASVHKVFGASNVSKMLKEVPKNERDNTANSLIYE 60
           CKLLRRRC Q+CPF+PYFSPHEP KFASVHKVFGASNVSKML EVP+++R + ANSL+YE
Sbjct: 48  CKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYE 107

Query: 61  ANVRLRDPVYGCMGAISCLQHQVQALQATLTAVRAEILRCKYRQGNMV-----------S 120
           ANVRLRDPVYGCMGAIS LQHQVQ+LQA + AVRAEIL+ KYR+ N +           +
Sbjct: 108 ANVRLRDPVYGCMGAISALQHQVQSLQAEVHAVRAEILKYKYREANFIPSSLVALLSSGA 167

Query: 121 IALPPPPPPPPELPPPPLQDASSSSSTLYNRPTVAAD 147
           +++  PPPPPP+ PPPPL   S+S+S++Y + T AAD
Sbjct: 168 VSVAAPPPPPPQPPPPPLPTTSTSTSSMYTQLTTAAD 204

[Close]
BLAST of Cp4.1LG01g05690 vs. TrEMBL
Match: A0A0D2RW35_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G015900 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 3.1e-50
Identity = 106/159 (66.67%), Postives = 124/159 (77.99%), Query Frame = 1 

Query: 1   CKLLRRRCGQQCPFAPYFSPHEPHKFASVHKVFGASNVSKMLKEVPKNERDNTANSLIYE 60
           CKLLRRRC Q+CPF+PYFSPHEP KFASVHKVFGASNVSKML EVP+++R + ANSL+YE
Sbjct: 48  CKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYE 107

Query: 61  ANVRLRDPVYGCMGAISCLQHQVQALQATLTAVRAEILRCKYRQGNM------------- 120
           ANVRLRDPVYGCMGAIS LQHQVQ+LQA + AVRAE+L+ KYR+ N              
Sbjct: 108 ANVRLRDPVYGCMGAISALQHQVQSLQAEVHAVRAELLKYKYREANFIPSSLVALLSSGA 167

Query: 121 VSIALPPPPPPPPELPPPPLQDASSSSSTLYNRPTVAAD 147
           VS+A PPPPP P   PPPPL   S+S+S++Y + T AAD
Sbjct: 168 VSVAAPPPPPQP---PPPPLPTTSTSTSSMYTQLTTAAD 203

[Close]
BLAST of Cp4.1LG01g05690 vs. TrEMBL
Match: B9S4B8_RICCO (LOB domain-containing protein, putative OS=Ricinus communis GN=RCOM_0689060 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.0e-49
Identity = 108/167 (64.67%), Postives = 123/167 (73.65%), Query Frame = 1 

Query: 1   CKLLRRRCGQQCPFAPYFSPHEPHKFASVHKVFGASNVSKMLKEVPKNERDNTANSLIYE 60
           CKLLRRRC Q+CPF+PYFSPHEP KFASVHKVFGASNVSKML EVP+++R + ANSL+YE
Sbjct: 46  CKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYE 105

Query: 61  ANVRLRDPVYGCMGAISCLQHQVQALQATLTAVRAEILRCKYRQGNM------------- 120
           ANVRLRDPVYGCMGAIS LQ Q+Q LQA L AVRAEIL+ KYR+ N+             
Sbjct: 106 ANVRLRDPVYGCMGAISALQQQIQTLQAELNAVRAEILKYKYREANILPSTHVALLSSGA 165

Query: 121 VSIA------LPPPPPPPPELPPPPLQDASSSSSTLYNRPTVAADSS 149
           VS+A       PPPP PPP  PPPPL   SSS+S   ++PT  AD S
Sbjct: 166 VSVAATSQSLTPPPPTPPPPPPPPPLPPTSSSTSLYTHQPTTVADYS 212

[Close]
BLAST of Cp4.1LG01g05690 vs. TrEMBL
Match: D7T4G0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g02380 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.4e-49
Identity = 108/168 (64.29%), Postives = 126/168 (75.00%), Query Frame = 1 

Query: 1   CKLLRRRCGQQCPFAPYFSPHEPHKFASVHKVFGASNVSKMLKEVPKNERDNTANSLIYE 60
           CKLLRRRC Q+CPF+PYFSPHEP KFASVHKVFGASNVSKML EVP+++R + ANSL+YE
Sbjct: 46  CKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYE 105

Query: 61  ANVRLRDPVYGCMGAISCLQHQVQALQATLTAVRAEILRCKYRQGNM------------- 120
           ANVRLRDPVYGCMGAIS LQ QVQ+LQA L AVRAEIL+ KYR+ N+             
Sbjct: 106 ANVRLRDPVYGCMGAISALQQQVQSLQAELNAVRAEILKYKYREANIIPPSHIALLSSGA 165

Query: 121 VSIALPPP-------PPPPPELPPPPLQDASSSSSTLYNRPTVAADSS 149
           VS+A PPP       PPPPP  PP PL    +SSS++Y +P+ +AD S
Sbjct: 166 VSVAAPPPAQPPAQAPPPPPPPPPIPLPLPPNSSSSMYTQPSSSADYS 213

[Close]
BLAST of Cp4.1LG01g05690 vs. TAIR10
Match: AT2G40470.1 (AT2G40470.1 LOB domain-containing protein 15)

HSP 1 Score: 178.7 bits (452), Expect = 2.7e-45
Identity = 99/161 (61.49%), Postives = 116/161 (72.05%), Query Frame = 1 

Query: 1   CKLLRRRCGQQCPFAPYFSPHEPHKFASVHKVFGASNVSKMLKEVPKNERDNTANSLIYE 60
           CKLLRRRC Q+CPF+PYFSPHEPHKFASVHKVFGASNVSKML EVP+++R + ANSL+YE
Sbjct: 49  CKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYE 108

Query: 61  ANVRLRDPVYGCMGAISCLQHQVQALQATLTAVRAEILRCKYRQGNMVSIALPPPP---- 120
           ANVRLRDPVYGCMGAIS LQ QVQALQA LTAVR+EIL  KY+Q   V+  + P      
Sbjct: 109 ANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEIL--KYKQREAVATLIVPSNSQVA 168

Query: 121 -----------PPPPELPPPPLQDAS----SSSSTLYNRPT 143
                       PPP+ P  P Q  +    S SS ++++PT
Sbjct: 169 GFHNSGGVSVIAPPPQRPTTPPQPTTAHPPSPSSCVFSQPT 207

[Close]
BLAST of Cp4.1LG01g05690 vs. TAIR10
Match: AT2G30340.1 (AT2G30340.1 LOB domain-containing protein 13)

HSP 1 Score: 172.9 bits (437), Expect = 1.5e-43
Identity = 77/109 (70.64%), Postives = 95/109 (87.16%), Query Frame = 1 

Query: 1   CKLLRRRCGQQCPFAPYFSPHEPHKFASVHKVFGASNVSKMLKEVPKNERDNTANSLIYE 60
           CKLLRRRC ++CPF+PYFSPHEPHKFA+VHKVFGASNVSKML EV +++R + ANSL+YE
Sbjct: 56  CKLLRRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYE 115

Query: 61  ANVRLRDPVYGCMGAISCLQHQVQALQATLTAVRAEILRCKYRQGNMVS 110
           AN+RLRDP+YGCMGAIS LQH +Q+LQ+ LT VR EILR KY++   ++
Sbjct: 116 ANLRLRDPIYGCMGAISALQHHIQSLQSELTTVRTEILRHKYQEATTIT 164

[Close]
BLAST of Cp4.1LG01g05690 vs. TAIR10
Match: AT2G30130.1 (AT2G30130.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 141.0 bits (354), Expect = 6.2e-34
Identity = 66/98 (67.35%), Postives = 79/98 (80.61%), Query Frame = 1 

Query: 1   CKLLRRRCGQQCPFAPYFSPHEPHKFASVHKVFGASNVSKMLKEVPKNERDNTANSLIYE 60
           CKLLRRRC + C FAPYF P +PHKFA VHKVFGASNVSKML+E+P ++R +  NSL++E
Sbjct: 12  CKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVNSLVFE 71

Query: 61  ANVRLRDPVYGCMGAISCLQHQVQALQATLTAVRAEIL 99
           AN R+RDPVYGC+GAIS LQ+QV  LQ  L   +AEIL
Sbjct: 72  ANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEIL 109

[Close]
BLAST of Cp4.1LG01g05690 vs. TAIR10
Match: AT1G31320.1 (AT1G31320.1 LOB domain-containing protein 4)

HSP 1 Score: 136.7 bits (343), Expect = 1.2e-32
Identity = 66/118 (55.93%), Postives = 85/118 (72.03%), Query Frame = 1 

Query: 1   CKLLRRRCGQQCPFAPYFSPHEPHKFASVHKVFGASNVSKMLKEVPKNERDNTANSLIYE 60
           CKLLRRRC Q C F+PYF   EP KFA+VH+VFGASNV+KML+E+P ++R +  +S++YE
Sbjct: 17  CKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSMVYE 76

Query: 61  ANVRLRDPVYGCMGAISCLQHQVQALQATLTAVRAEILRCKYRQG-NMVSIALPPPPP 118
           AN R+RDPVYGC+GAIS LQ Q+  LQA L   +AE++  + RQ  N     L P  P
Sbjct: 77  ANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHGLCPDSP 134

[Close]
BLAST of Cp4.1LG01g05690 vs. TAIR10
Match: AT5G63090.2 (AT5G63090.2 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 132.5 bits (332), Expect = 2.2e-31
Identity = 72/148 (48.65%), Postives = 92/148 (62.16%), Query Frame = 1 

Query: 1   CKLLRRRCGQQCPFAPYFSPHEPHKFASVHKVFGASNVSKMLKEVPKNERDNTANSLIYE 60
           CK LRR+C   C FAPYF P EPHKFA+VHK+FGASNV+K+L E+  ++R++  NSL YE
Sbjct: 15  CKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYE 74

Query: 61  ANVRLRDPVYGCMGAISCLQHQVQALQATLTAVRAEILR------CKYRQGNMVSIALPP 120
           A  R+RDPVYGC+GAIS LQ QV  LQ  L A  A++             GN+V +   P
Sbjct: 75  AEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAGAPGNVVDLVFQP 134

Query: 121 PPPPPPELPP-PPLQDASSSSSTLYNRP 142
            P P  +LPP  P+   S +S  +   P
Sbjct: 135 QPLPSQQLPPLNPVYRLSGASPVMNQMP 162

[Close]
BLAST of Cp4.1LG01g05690 vs. NCBI nr
Match: gi|449457480|ref|XP_004146476.1| (PREDICTED: LOB domain-containing protein 15 [Cucumis sativus])

HSP 1 Score: 220.7 bits (561), Expect = 1.7e-54
Identity = 117/170 (68.82%), Postives = 131/170 (77.06%), Query Frame = 1 

Query: 1   CKLLRRRCGQQCPFAPYFSPHEPHKFASVHKVFGASNVSKMLKEVPKNERDNTANSLIYE 60
           CKLLRRRC Q+CPF+PYFSPHEPHKFASVHKVFGASNVSKML EV  N+R + ANSL+YE
Sbjct: 53  CKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVSDNQRADAANSLVYE 112

Query: 61  ANVRLRDPVYGCMGAISCLQHQVQALQATLTAVRAEILRCKYRQGN-------------- 120
           ANVRLRDPVYGCMGAIS LQHQ+Q+LQA L AVRAEILR K+R+ N              
Sbjct: 113 ANVRLRDPVYGCMGAISALQHQIQSLQAELNAVRAEILRHKFREANNIIHSSPQQQHVPF 172

Query: 121 -------MVSIALPPPPPPPPELPPPPLQDASSSSSTLYNRPTVAADSSF 150
                  +VS+ALPPPPPPPP LPPP   DASSSSS+LYNR TVAA + +
Sbjct: 173 LSSSSTVVVSVALPPPPPPPP-LPPPHHHDASSSSSSLYNRRTVAAAADY 221

[Close]
BLAST of Cp4.1LG01g05690 vs. NCBI nr
Match: gi|659114146|ref|XP_008456927.1| (PREDICTED: LOB domain-containing protein 15 [Cucumis melo])

HSP 1 Score: 219.9 bits (559), Expect = 3.0e-54
Identity = 116/171 (67.84%), Postives = 131/171 (76.61%), Query Frame = 1 

Query: 1   CKLLRRRCGQQCPFAPYFSPHEPHKFASVHKVFGASNVSKMLKEVPKNERDNTANSLIYE 60
           CKLLRRRC Q+CPF+PYFSPHEPHKFASVHKVFGASNVSKML EV +N+R + ANSL+YE
Sbjct: 53  CKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENQRADAANSLVYE 112

Query: 61  ANVRLRDPVYGCMGAISCLQHQVQALQATLTAVRAEILRCKYRQGN-------------- 120
           ANVRLRDPVYGCMGAIS LQHQ+Q+LQA L AVRAEILR K+R+ N              
Sbjct: 113 ANVRLRDPVYGCMGAISALQHQIQSLQAELNAVRAEILRHKFREANNMIHSSPQQQHVPF 172

Query: 121 --------MVSIALPPPPPPPPELPPPPLQDASSSSSTLYNRPTVAADSSF 150
                   +VS+ALPPPPPP   LPPP   DASSSSS+LYNRPTVAA + +
Sbjct: 173 LSSSSSTEVVSVALPPPPPP---LPPPHHHDASSSSSSLYNRPTVAAAADY 220

[Close]
BLAST of Cp4.1LG01g05690 vs. NCBI nr
Match: gi|728838615|gb|KHG18058.1| (LOB domain-containing 15 -like protein [Gossypium arboreum])

HSP 1 Score: 209.9 bits (533), Expect = 3.1e-51
Identity = 104/157 (66.24%), Postives = 126/157 (80.25%), Query Frame = 1 

Query: 1   CKLLRRRCGQQCPFAPYFSPHEPHKFASVHKVFGASNVSKMLKEVPKNERDNTANSLIYE 60
           CKLLRRRC Q+CPF+PYFSPHEP KFASVHKVFGASNVSKML EVP+++R + ANSL+YE
Sbjct: 48  CKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYE 107

Query: 61  ANVRLRDPVYGCMGAISCLQHQVQALQATLTAVRAEILRCKYRQGNMV-----------S 120
           ANVRLRDPVYGCMGAIS LQHQVQ+LQA + AVRAEIL+ KYR+ N +           +
Sbjct: 108 ANVRLRDPVYGCMGAISALQHQVQSLQAEVHAVRAEILKYKYREANFIPSSLVALLSSGA 167

Query: 121 IALPPPPPPPPELPPPPLQDASSSSSTLYNRPTVAAD 147
           +++  PPPPPP+ PPPPL   S+S+S++Y + T AAD
Sbjct: 168 VSVAAPPPPPPQPPPPPLPTTSTSTSSMYTQLTTAAD 204

[Close]
BLAST of Cp4.1LG01g05690 vs. NCBI nr
Match: gi|823250725|ref|XP_012457948.1| (PREDICTED: LOB domain-containing protein 15-like [Gossypium raimondii])

HSP 1 Score: 206.1 bits (523), Expect = 4.4e-50
Identity = 106/159 (66.67%), Postives = 124/159 (77.99%), Query Frame = 1 

Query: 1   CKLLRRRCGQQCPFAPYFSPHEPHKFASVHKVFGASNVSKMLKEVPKNERDNTANSLIYE 60
           CKLLRRRC Q+CPF+PYFSPHEP KFASVHKVFGASNVSKML EVP+++R + ANSL+YE
Sbjct: 48  CKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYE 107

Query: 61  ANVRLRDPVYGCMGAISCLQHQVQALQATLTAVRAEILRCKYRQGNM------------- 120
           ANVRLRDPVYGCMGAIS LQHQVQ+LQA + AVRAE+L+ KYR+ N              
Sbjct: 108 ANVRLRDPVYGCMGAISALQHQVQSLQAEVHAVRAELLKYKYREANFIPSSLVALLSSGA 167

Query: 121 VSIALPPPPPPPPELPPPPLQDASSSSSTLYNRPTVAAD 147
           VS+A PPPPP P   PPPPL   S+S+S++Y + T AAD
Sbjct: 168 VSVAAPPPPPQP---PPPPLPTTSTSTSSMYTQLTTAAD 203

[Close]
BLAST of Cp4.1LG01g05690 vs. NCBI nr
Match: gi|255559635|ref|XP_002520837.1| (PREDICTED: LOB domain-containing protein 15 [Ricinus communis])

HSP 1 Score: 203.4 bits (516), Expect = 2.9e-49
Identity = 108/167 (64.67%), Postives = 123/167 (73.65%), Query Frame = 1 

Query: 1   CKLLRRRCGQQCPFAPYFSPHEPHKFASVHKVFGASNVSKMLKEVPKNERDNTANSLIYE 60
           CKLLRRRC Q+CPF+PYFSPHEP KFASVHKVFGASNVSKML EVP+++R + ANSL+YE
Sbjct: 46  CKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYE 105

Query: 61  ANVRLRDPVYGCMGAISCLQHQVQALQATLTAVRAEILRCKYRQGNM------------- 120
           ANVRLRDPVYGCMGAIS LQ Q+Q LQA L AVRAEIL+ KYR+ N+             
Sbjct: 106 ANVRLRDPVYGCMGAISALQQQIQTLQAELNAVRAEILKYKYREANILPSTHVALLSSGA 165

Query: 121 VSIA------LPPPPPPPPELPPPPLQDASSSSSTLYNRPTVAADSS 149
           VS+A       PPPP PPP  PPPPL   SSS+S   ++PT  AD S
Sbjct: 166 VSVAATSQSLTPPPPTPPPPPPPPPLPPTSSSTSLYTHQPTTVADYS 212

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g05690 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LBD15_ARATH4.8e-4461.49LOB domain-containing protein 15 OS=Arabidopsis thaliana GN=LBD15 PE=2 SV=2[more]
LBD13_ARATH2.6e-4270.64LOB domain-containing protein 13 OS=Arabidopsis thaliana GN=LBD13 PE=2 SV=2[more]
LBD12_ARATH1.1e-3267.35LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2[more]
LBD4_ARATH2.1e-3155.93LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1[more]
LOB_ARATH3.9e-3048.65Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana GN=LOB PE=2 SV=1[more]
BLAST of Cp4.1LG01g05690 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KM94_CUCSA1.2e-5468.82Uncharacterized protein OS=Cucumis sativus GN=Csa_5G219380 PE=4 SV=1[more]
A0A0B0NU48_GOSAR2.1e-5166.24LOB domain-containing 15-like protein OS=Gossypium arboreum GN=F383_01332 PE=4 S... [more]
A0A0D2RW35_GOSRA3.1e-5066.67Uncharacterized protein OS=Gossypium raimondii GN=B456_012G015900 PE=4 SV=1[more]
B9S4B8_RICCO2.0e-4964.67LOB domain-containing protein, putative OS=Ricinus communis GN=RCOM_0689060 PE=4... [more]
D7T4G0_VITVI3.4e-4964.29Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g02380 PE=4 SV=... [more]
BLAST of Cp4.1LG01g05690 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G40470.12.7e-4561.49 LOB domain-containing protein 15[more]
AT2G30340.11.5e-4370.64 LOB domain-containing protein 13[more]
AT2G30130.16.2e-3467.35 Lateral organ boundaries (LOB) domain family protein[more]
AT1G31320.11.2e-3255.93 LOB domain-containing protein 4[more]
AT5G63090.22.2e-3148.65 Lateral organ boundaries (LOB) domain family protein[more]
BLAST of Cp4.1LG01g05690 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449457480|ref|XP_004146476.1|1.7e-5468.82PREDICTED: LOB domain-containing protein 15 [Cucumis sativus][more]
gi|659114146|ref|XP_008456927.1|3.0e-5467.84PREDICTED: LOB domain-containing protein 15 [Cucumis melo][more]
gi|728838615|gb|KHG18058.1|3.1e-5166.24LOB domain-containing 15 -like protein [Gossypium arboreum][more]
gi|823250725|ref|XP_012457948.1|4.4e-5066.67PREDICTED: LOB domain-containing protein 15-like [Gossypium raimondii][more]
gi|255559635|ref|XP_002520837.1|2.9e-4964.67PREDICTED: LOB domain-containing protein 15 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004883LOB
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
cellular_component GO:0005634 nucleus
cellular_component GO:0005951 carbamoyl-phosphate synthase complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g05690.1Cp4.1LG01g05690.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195DUF260coord: 1..94
score: 7.0
IPR004883Lateral organ boundaries, LOBPROFILEPS50891LOBcoord: 1..97
score: 23
NoneNo IPR availableunknownCoilCoilcoord: 76..96
scor
NoneNo IPR availablePANTHERPTHR31301FAMILY NOT NAMEDcoord: 1..126
score: 5.9
NoneNo IPR availablePANTHERPTHR31301:SF2LOB DOMAIN-CONTAINING PROTEIN 15coord: 1..126
score: 5.9