CsGy4G017780 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G017780
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	GrpE protein homolog
Location	Chr4 : 22954724 .. 22957878 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACCCTTCTCAGAACTCCATTTTTTCAGGCAACTCCTCCCGCCAGCGTTTCCGCCTTTTCCTTATCCAAATCCACCCTAAAACCCTCTTCTTTATCCTTTACAACATCTCACTCCTTCATTTGTTGCTTCAACTCCTCCAAGTTTTCAACTCGTCCTCCTTCTCTCCGGTTCCCCAAGCGGCCTTTTGCTTCCTCCGGTGAAACGGAAATTAGCGAGCTTGAAGAGGAAGTTCGCGATTCTGAGGCGGAGGTACTCTTAATCCTTCTTCTTCTGGGAGTTGCTGTTTCTTTACCCTACTTTTGTAGTTTGACTCTTTAGTTGGTTAGGTTAGATAGTGTTGGTGGGTCTGGGTATTCCTTTATGCTGTGCAATTGGTTGGAATAGGATCTCATTGTTATTATCTAATGTTATCAATTGGGCGTTGGAGTGGAGGTGGTTGCTTCTTGCTTTGCTGTTTGAAAATGGAATCAGTTTAGTAAGTGGGAACGTGGCATTCTGGCATTAACTCAATTCGTTGTCTATTTCTCGGTTCTTAATTACTCAACCGAATGATGTCTAGAAAGAGATTTAAAGACAAATATGTTCAGAGTTTTAGACCCTTCTCAAATCTCACCTTTGGAATATCCACTTAATATCTCAATTTTTTGTGGTAACTAAACACAATGGAGTATCGAAGCAGTTTTGGTAGTTCTGGGCCCATGATTCGAGTTTGGTTTAATCATTCTTATTGACATTTTTGCCGTATTGCTCTCAGCAAGTTTATGTGAAAAATAAGATACCTATGCTTTTCTCCAAGTCTAATACTGAAAAGTTTCTGATTCCTCTATGTGCCCTATGCAACTTTGTGGATACTACAAAAATATAATCAAATGATGGGTCTATAAGCTCCATTCAATTCAAGACTAAAATTTAGATGTTGAAATAACATGGTCCATAAAACACAAATTGTGTTCTTTTAGACCTAAAAGTATAAATAATTGATTTGATTTTTGTTAAAATTGGAAGATTTTTGGATATTGGATGTTTAGAGAGTGTAATAACTTTTGGCTATGGAAAATTAATTCGAATGGCATGGATTTAGATTGTTTTAATTAAGTTTGTACAGAAATCGTGCCCTTGCACTTTCTTGTTGCTCATATATTTATGTAACAGGACTCTTCTGTTAGTTATACCGGTGTAGAAGATGCTACAAGTGATAATGACATAAGTGACGACTCAGAAGTTAATACTGAGGATTCCACTCAGTCAGTCATTATAGCAGCACTTCAGTCCTATAAGCAGGCGTTAGCTGATAACGATGGAGCTCAAATGGTTGAAATAGAGTCTTTTCTGAAGTCAATTGAAGATGAAAAGCTCGCAGTTGAAAGGAAGTTGAGTTCCTTAATTGAAGAACTTTCTGTAGAGAAGGATCGAGTTTTGAGAATCAGTGCTGACTTTGATAATTTTCGGAAGAGAACAGAGCGAGAACGTCTTTCATTAGTAAAAAATGCTCAAGGAGAAGTAGTAGAGACTCTATTAGGTGTCCTGGATAATTTTGAGAGGGCTAGGGCACAGATCAAGGTGGAGACAGAGGGGGAAGAGAAGATCAATCAGAGTTACCAGAGCATCTATAAGCAGTTCACCGAGATTTTGGGCTCCTTGGGTGTAGTTCCTGTTGAGACAATTGGGAAACCGTTTGACCCACTGGTGAGTTTTTTCTTCTTGTCAAGTAATCATTCTTGTGTCTCGTTTCCCCCTTATTCATCAAAGTTTGAGTCACTACTAATCAGTCAGTAGAGTCTAATAAGTGAACTTGTATTCCATGTGTGAACCTGTAGTCTCTTTTATTTAACATGACCATCCATTTTCCTTGACATTTCCCATATTGGTAACTTCCTAAAACTTAATAATTGGTGAACCTGTTTTCGTTAACAAACTGTTCTCTTCTTAAAGTATCTGCCCATGGTGGATTTATCCATCAACTTGATGAGTAAAATGGTGGTATATATTTAATACCATTTGTTCTAGTAAGACTGAGGTCAGACAATAGAAACTTATGGAACTGTTGGACCTTTCCTTCGAAAAGTTATGATCATGACTGGATGAACTTTTTCTGATATCTGATCTTGTAATCTCAAACATGAATATGGTTTAAAACCTAACCAACCCATGAAGGTTCCTTTATTTGTGTCTATTTTGACCATAGAAAAAACAAGAGTTGTGATCAGCTAATGCGAAGACCAAATGATTTCGGTAGCCATCACTTTTGTTTTGCATTTAAAATGATGAGAGTGTGAATCAAATTTTCCTTTATAATATTTTTCCCAAAAGTATGTGATGTAAATTATTGGTGGAGTTCCCTGGATCCATCCATAAGAAGTAATGCGTCTCATATGGGTTATTTTTCATGGAAAAGGATCAAAGAAGAGAAAGTTACTTTGGAAGTGTGCTATCTTGGATCCGTTATCGGTTTTATGGTTGGAGCTCAATAAAAGAATTATTGAAGATAAATTTGAAGATCTAGACCAGGTTCAGAGTGAATCTGATAGTGTCATTGTTGGAGCAAAAAGGTTGAAGACTTTACTAGTTCTGCCAATCAGTCTATTTCATTCAATAGGTGATTTTTCCTCGACAATTTTATCTTTCAAGGAGGCCTTCTCCTGAAATATTGTAACCTATTCAAATTGTTATTATCAATGACAAAGCTATTAGTTCTATCTGATATTGTGACTAATCTCTTGTATCTGTTTAAGTTTTCGACTATCTTCAATCCCATCAAATTTTAAGGTAATGTGTTTTTGTGTTTTCATTTTTGAATTCTATTTGATATGCATTCAAAACTAGCATGGCATGATCAAACATGGAACTAATCAGGGTCCTGTTTTTTTATCTCTCTTTCTGGGGACCAAGTTTGGTAAGTTGAAACTTGTTTAATCAATTTCTTCCTACAGCTTCATGAAGCAATCATGAGGGAGGACTCCACAGAATTTGAGGAAGGTATCATACTCGACGAGTTCCGTAAAGGATTCTTGCTTGGTGACAGACTCTTACGTCCATCAATGGTGAAAGTTTCAGCCGGTCCCGGGCCTGAAAAGTCAGATGAAACCGCACCAGCAGAAAAGCTTGATTCAAGTGAAGAATTTGCAAACTCGGAATCAGAGTCTTCTTAA

mRNA sequence

ATGGCGACCCTTCTCAGAACTCCATTTTTTCAGGCAACTCCTCCCGCCAGCGTTTCCGCCTTTTCCTTATCCAAATCCACCCTAAAACCCTCTTCTTTATCCTTTACAACATCTCACTCCTTCATTTGTTGCTTCAACTCCTCCAAGTTTTCAACTCGTCCTCCTTCTCTCCGGTTCCCCAAGCGGCCTTTTGCTTCCTCCGGTGAAACGGAAATTAGCGAGCTTGAAGAGGAAGTTCGCGATTCTGAGGCGGAGGACTCTTCTGTTAGTTATACCGGTGTAGAAGATGCTACAAGTGATAATGACATAAGTGACGACTCAGAAGTTAATACTGAGGATTCCACTCAGTCAGTCATTATAGCAGCACTTCAGTCCTATAAGCAGGCGTTAGCTGATAACGATGGAGCTCAAATGGTTGAAATAGAGTCTTTTCTGAAGTCAATTGAAGATGAAAAGCTCGCAGTTGAAAGGAAGTTGAGTTCCTTAATTGAAGAACTTTCTGTAGAGAAGGATCGAGTTTTGAGAATCAGTGCTGACTTTGATAATTTTCGGAAGAGAACAGAGCGAGAACGTCTTTCATTAGTAAAAAATGCTCAAGGAGAAGTAGTAGAGACTCTATTAGGTGTCCTGGATAATTTTGAGAGGGCTAGGGCACAGATCAAGGTGGAGACAGAGGGGGAAGAGAAGATCAATCAGAGTTACCAGAGCATCTATAAGCAGTTCACCGAGATTTTGGGCTCCTTGGGTGTAGTTCCTGTTGAGACAATTGGGAAACCGTTTGACCCACTGCTTCATGAAGCAATCATGAGGGAGGACTCCACAGAATTTGAGGAAGGTATCATACTCGACGAGTTCCGTAAAGGATTCTTGCTTGGTGACAGACTCTTACGTCCATCAATGGTGAAAGTTTCAGCCGGTCCCGGGCCTGAAAAGTCAGATGAAACCGCACCAGCAGAAAAGCTTGATTCAAGTGAAGAATTTGCAAACTCGGAATCAGAGTCTTCTTAA

Coding sequence (CDS)

ATGGCGACCCTTCTCAGAACTCCATTTTTTCAGGCAACTCCTCCCGCCAGCGTTTCCGCCTTTTCCTTATCCAAATCCACCCTAAAACCCTCTTCTTTATCCTTTACAACATCTCACTCCTTCATTTGTTGCTTCAACTCCTCCAAGTTTTCAACTCGTCCTCCTTCTCTCCGGTTCCCCAAGCGGCCTTTTGCTTCCTCCGGTGAAACGGAAATTAGCGAGCTTGAAGAGGAAGTTCGCGATTCTGAGGCGGAGGACTCTTCTGTTAGTTATACCGGTGTAGAAGATGCTACAAGTGATAATGACATAAGTGACGACTCAGAAGTTAATACTGAGGATTCCACTCAGTCAGTCATTATAGCAGCACTTCAGTCCTATAAGCAGGCGTTAGCTGATAACGATGGAGCTCAAATGGTTGAAATAGAGTCTTTTCTGAAGTCAATTGAAGATGAAAAGCTCGCAGTTGAAAGGAAGTTGAGTTCCTTAATTGAAGAACTTTCTGTAGAGAAGGATCGAGTTTTGAGAATCAGTGCTGACTTTGATAATTTTCGGAAGAGAACAGAGCGAGAACGTCTTTCATTAGTAAAAAATGCTCAAGGAGAAGTAGTAGAGACTCTATTAGGTGTCCTGGATAATTTTGAGAGGGCTAGGGCACAGATCAAGGTGGAGACAGAGGGGGAAGAGAAGATCAATCAGAGTTACCAGAGCATCTATAAGCAGTTCACCGAGATTTTGGGCTCCTTGGGTGTAGTTCCTGTTGAGACAATTGGGAAACCGTTTGACCCACTGCTTCATGAAGCAATCATGAGGGAGGACTCCACAGAATTTGAGGAAGGTATCATACTCGACGAGTTCCGTAAAGGATTCTTGCTTGGTGACAGACTCTTACGTCCATCAATGGTGAAAGTTTCAGCCGGTCCCGGGCCTGAAAAGTCAGATGAAACCGCACCAGCAGAAAAGCTTGATTCAAGTGAAGAATTTGCAAACTCGGAATCAGAGTCTTCTTAA

Protein sequence

MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFPKRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVIIAALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPSMVKVSAGPGPEKSDETAPAEKLDSSEEFANSESESS

Homology

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BLAST of CsGy4G017780 vs. NCBI nr
Match: XP_004144308.1 (PREDICTED: grpE protein homolog, mitochondrial [Cucumis sativus] >KGN54657.1 hypothetical protein Csa_4G417510 [Cucumis sativus])

HSP 1 Score: 611.7 bits (1576), Expect = 1.5e-171
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0


Query: 1   MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP 60
           MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP
Sbjct: 1   MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP 60

Query: 61  KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVII 120
           KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVII
Sbjct: 61  KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVII 120

Query: 121 AALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISADF 180
           AALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISADF
Sbjct: 121 AALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISADF 180

Query: 181 DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 240
           DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ
Sbjct: 181 DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 240

Query: 241 FTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPSM 300
           FTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPSM
Sbjct: 241 FTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPSM 300

Query: 301 VKVSAGPGPEKSDETAPAEKLDSSEEFANSESESS 336
           VKVSAGPGPEKSDETAPAEKLDSSEEFANSESESS
Sbjct: 301 VKVSAGPGPEKSDETAPAEKLDSSEEFANSESESS 335

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BLAST of CsGy4G017780 vs. NCBI nr
Match: XP_008455767.1 (PREDICTED: protein GrpE [Cucumis melo])

HSP 1 Score: 591.7 bits (1524), Expect = 1.6e-165
Identity = 324/335 (96.72%), Postives = 331/335 (98.81%), Query Frame = 0


Query: 1   MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP 60
           MATLLRTPFFQAT PASVSAFSLSKSTLKPSSLSFTTSHSFIC  NSSKFSTRPPSLRFP
Sbjct: 1   MATLLRTPFFQATAPASVSAFSLSKSTLKPSSLSFTTSHSFICSINSSKFSTRPPSLRFP 60

Query: 61  KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVII 120
           KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVN EDSTQSVI+
Sbjct: 61  KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNAEDSTQSVIV 120

Query: 121 AALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISADF 180
           AALQSYKQAL+DN+GAQ+VEIESFLKSIEDEKLAVERKL+SLIEELSVEKDRVLRISADF
Sbjct: 121 AALQSYKQALSDNNGAQIVEIESFLKSIEDEKLAVERKLNSLIEELSVEKDRVLRISADF 180

Query: 181 DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 240
           DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ
Sbjct: 181 DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 240

Query: 241 FTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPSM 300
           FTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFE+GIILDEFRKGFLLGDRLLRPSM
Sbjct: 241 FTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEDGIILDEFRKGFLLGDRLLRPSM 300

Query: 301 VKVSAGPGPEKSDETAPAEKLDSSEEFANSESESS 336
           VKVSAGPGPEKSDETAPAE+LDSSEEFANSESESS
Sbjct: 301 VKVSAGPGPEKSDETAPAEELDSSEEFANSESESS 335

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BLAST of CsGy4G017780 vs. NCBI nr
Match: XP_022154525.1 (uncharacterized protein LOC111021782 isoform X1 [Momordica charantia])

HSP 1 Score: 513.8 bits (1322), Expect = 4.3e-142
Identity = 286/336 (85.12%), Postives = 306/336 (91.07%), Query Frame = 0


Query: 1   MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP 60
           MAT+LRTPFFQATPPASVSA S SKS+LKPSSLSF TSH+ I C NSS   +RP SLRFP
Sbjct: 1   MATVLRTPFFQATPPASVSAVSSSKSSLKPSSLSFRTSHTTIYCINSSSMLSRPRSLRFP 60

Query: 61  K-RPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVI 120
           K   FASSGETE+SE+EEEVR     DSSVSY+GVEDA SDNDISDD+EV+TED  QSVI
Sbjct: 61  KFARFASSGETEVSEIEEEVRXXXXXDSSVSYSGVEDAASDNDISDDAEVDTEDLPQSVI 120

Query: 121 IAALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISAD 180
           I+AL+SYKQALADN+GAQ+VEIESFLKSIEDEKLAVERKL SL EEL++EKDR+LRISAD
Sbjct: 121 ISALESYKQALADNNGAQIVEIESFLKSIEDEKLAVERKLQSLTEELTIEKDRILRISAD 180

Query: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240
           FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK
Sbjct: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240

Query: 241 QFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPS 300
           QFTEIL SLGVVPVET+GKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLG+RLLRPS
Sbjct: 241 QFTEILASLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGERLLRPS 300

Query: 301 MVKVSAGPGPEKSDETAPAEKLDSSEEFANSESESS 336
           MVKVSAGPGPEKSDE AP E+ DSSE+   SESESS
Sbjct: 301 MVKVSAGPGPEKSDEVAPTEEQDSSEKSEGSESESS 336

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BLAST of CsGy4G017780 vs. NCBI nr
Match: XP_022966384.1 (uncharacterized protein LOC111466047 [Cucurbita maxima] >XP_022966385.1 uncharacterized protein LOC111466047 [Cucurbita maxima])

HSP 1 Score: 502.3 bits (1292), Expect = 1.3e-138
Identity = 282/338 (83.43%), Postives = 303/338 (89.64%), Query Frame = 0


Query: 1   MATLLRTPFFQATPPASVSAFSLSKST--LKPSSLSFTTSHSFICCFNSSKFSTRPPSLR 60
           MAT+LR PFFQATPPA+VS    SKST  LKPSSLSF TSHS  CC NSSK S RP S+R
Sbjct: 1   MATILRAPFFQATPPANVSTIFSSKSTLKLKPSSLSFRTSHSPFCCINSSKLS-RPRSIR 60

Query: 61  FPK-RPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQS 120
           FPK  PFASSG TE+SE+EEEV +SEAEDSSVSYTGVEDA SD+DI+D +EVN EDS QS
Sbjct: 61  FPKLGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQS 120

Query: 121 VIIAALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRIS 180
           VI+AALQSYKQALADN+ +Q+ EIESFLKSIEDEKLAVERKL SL E+LSVEKDR+LRIS
Sbjct: 121 VILAALQSYKQALADNNESQIAEIESFLKSIEDEKLAVERKLKSLTEDLSVEKDRILRIS 180

Query: 181 ADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSI 240
           ADF+NFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSI
Sbjct: 181 ADFENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSI 240

Query: 241 YKQFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLR 300
           YKQF EILGSLGVVPVET+GKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLR
Sbjct: 241 YKQFNEILGSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLR 300

Query: 301 PSMVKVSAGPGPEKSDETAPAEKLDSSEEFANSESESS 336
           PSMVKVSAGPGPEK  E AP+E+ DSSE +  S +ESS
Sbjct: 301 PSMVKVSAGPGPEKPAEAAPSEEHDSSENYERSNTESS 337

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BLAST of CsGy4G017780 vs. NCBI nr
Match: XP_023517558.1 (uncharacterized protein LOC111781285 [Cucurbita pepo subsp. pepo] >XP_023517559.1 uncharacterized protein LOC111781285 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 501.5 bits (1290), Expect = 2.2e-138
Identity = 279/336 (83.04%), Postives = 301/336 (89.58%), Query Frame = 0


Query: 1   MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP 60
           MAT+LR PFFQATPPA+VS    SKSTLK SSLSF TSHS  CC NSSK S RP S+RFP
Sbjct: 1   MATILRAPFFQATPPANVSTVFSSKSTLKSSSLSFRTSHSTFCCVNSSKLS-RPRSIRFP 60

Query: 61  K-RPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVI 120
           K  PFASSG TE+SE+EEEV +SEAEDSSVSYTGVEDA SD+DI+D +EVN EDS QSVI
Sbjct: 61  KLGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSVI 120

Query: 121 IAALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISAD 180
           +AALQSYKQALADN+ +Q+ EIESFLKSIEDEKLA ERKL SL E+LSVEKDR+LRISAD
Sbjct: 121 LAALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRISAD 180

Query: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240
           F+NFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK
Sbjct: 181 FENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240

Query: 241 QFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPS 300
           QF EILGSLGVVPVET+GKPFDPLLHEAIMREDSTEF+EGIILDEFRKGFLLGDRLLRPS
Sbjct: 241 QFNEILGSLGVVPVETVGKPFDPLLHEAIMREDSTEFDEGIILDEFRKGFLLGDRLLRPS 300

Query: 301 MVKVSAGPGPEKSDETAPAEKLDSSEEFANSESESS 336
           MVKVSAGPGPEK  E AP+E+ DSSE +  S +ESS
Sbjct: 301 MVKVSAGPGPEKPAEAAPSEEHDSSENYERSNTESS 335

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BLAST of CsGy4G017780 vs. TAIR10
Match: AT5G17710.2 (Co-chaperone GrpE family protein)

HSP 1 Score: 289.3 bits (739), Expect = 3.1e-78
Identity = 156/219 (71.23%), Postives = 184/219 (84.02%), Query Frame = 0


Query: 117 SVIIAALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRI 176
           +VI A L+SYK+ALADN+  ++ EIE+ LKSIEDEK  +  K++SL  ELSVE+DR++RI
Sbjct: 110 AVITALLKSYKEALADNNEGKIAEIEASLKSIEDEKFLLADKVASLSNELSVERDRLIRI 169

Query: 177 SADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQS 236
           SADFDNFRKRTERERL+LV NAQGEVVE LL VLDNFERA++QIKVETEGEEK+  SYQS
Sbjct: 170 SADFDNFRKRTERERLNLVSNAQGEVVENLLAVLDNFERAKSQIKVETEGEEKVTNSYQS 229

Query: 237 IYKQFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLL 296
           IYKQF EILGSLGV+ VET+GK FDP+LHEAIMREDS E+EEGI+L+E+RKGFLLG+RLL
Sbjct: 230 IYKQFVEILGSLGVIHVETVGKQFDPMLHEAIMREDSAEYEEGIVLEEYRKGFLLGERLL 289

Query: 297 RPSMVKVSAGPGPEKSDETAPAEKLDSSEEFANSESESS 336
           RPSMVKVSAGPGPEK  E    E   +++  A  ES SS
Sbjct: 290 RPSMVKVSAGPGPEKPLEAEGEEA--TAQGSAEEESSSS 326

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BLAST of CsGy4G017780 vs. TAIR10
Match: AT1G36390.1 (Co-chaperone GrpE family protein)

HSP 1 Score: 183.0 bits (463), Expect = 3.1e-46
Identity = 97/218 (44.50%), Postives = 152/218 (69.72%), Query Frame = 0


Query: 99  SDNDISDDSEVNTEDSTQSVIIAALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERK 158
           S +  ++  E N++   Q+ +   ++SYKQAL + D   + EIE+    IE EK  +++K
Sbjct: 57  SAHQTNNSEEANSKQ--QADVKTLIRSYKQALLNGDETSVTEIETMFCKIEKEKNKMDQK 116

Query: 159 LSSLIEELSVEKDRVLRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARA 218
           + SL  +++ EK+  +R+ ADFDN RK+ +++RLS   NA+ +++++LL ++D+FE+A+ 
Sbjct: 117 VLSLSMKIASEKEMKIRLQADFDNTRKKLDKDRLSTESNAKVQILKSLLPIIDSFEKAKL 176

Query: 219 QIKVETEGEEKINQSYQSIYKQFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEE 278
           Q++V+T+ E+KI+ SYQ IY+QF E+L  L V  + T+GKPFDPLLHEAI RE+S   + 
Sbjct: 177 QVRVDTDKEKKIDTSYQGIYRQFVEVLRYLRVSVIATVGKPFDPLLHEAISREESEAVKA 236

Query: 279 GIILDEFRKGFLLGDRLLRPSMVKVSAGPGPEKSDETA 317
           GII +E  KGF+LGDR+LRP+ VKVS GP  +K+   A
Sbjct: 237 GIITEELNKGFVLGDRVLRPAKVKVSLGPVNKKTPSAA 272

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BLAST of CsGy4G017780 vs. Swiss-Prot
Match: sp|Q8DJB3|GRPE_THEEB (Protein GrpE OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=grpE PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 5.9e-34
Identity = 71/144 (49.31%), Postives = 102/144 (70.83%), Query Frame = 0


Query: 174 LRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQS 233
           +R++ADF+NFRKRT+RE+  L    +  V+  LL V+D+FE AR  I+ ETE EEKI++S
Sbjct: 102 IRLAADFENFRKRTQREKEELELQIKCSVIADLLPVVDSFELARTHIQTETEAEEKIHRS 161

Query: 234 YQSIYKQFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGD 293
           YQ +YKQ  E L  +GV  ++  GKPFDP LHEA++RE + E  EG +++E ++G++LGD
Sbjct: 162 YQGVYKQLVECLKRIGVSAMQAKGKPFDPNLHEAVLREATNEHPEGTVIEELKRGYMLGD 221

Query: 294 RLLRPSMVKVSAGPGPEKSDETAP 318
           R+LR +MVKV+A P    +  T P
Sbjct: 222 RVLRHAMVKVAAPPEEGSASNTNP 245

[Close]

BLAST of CsGy4G017780 vs. Swiss-Prot
Match: sp|A2BNE2|GRPE_PROMS (Protein GrpE OS=Prochlorococcus marinus (strain AS9601) OX=146891 GN=grpE PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.9e-32
Identity = 73/178 (41.01%), Postives = 115/178 (64.61%), Query Frame = 0


Query: 156 ERKLSSLIEELSVEKDRVLRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFER 215
           + +L  L +E    K++ +RISADFDNFRKR  R++  L      + +  +L ++DNFER
Sbjct: 60  DARLEQLEKEHETLKNQYVRISADFDNFRKRQSRDQDDLKIQLVSKTLTAILPIVDNFER 119

Query: 216 ARAQIKVETEGEEKINQSYQSIYKQFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTE 275
           AR Q+K E+E  + +++SYQ +YKQ  E+L   GV P+  +G+ FDP LHEA++RE S +
Sbjct: 120 ARQQLKPESEEAQSLHRSYQGLYKQLVEVLKQQGVSPMRVVGQQFDPSLHEAVLREPSEK 179

Query: 276 FEEGIILDEFRKGFLLGDRLLRPSMVKVSAGPGPEKSDETAPAEKLDSSEEFANSESE 334
           FEE  I++E ++G+ L  ++LR ++VKVS GPG + S E    +K++   +   + SE
Sbjct: 180 FEEDFIIEELQRGYHLEGKVLRHALVKVSMGPGKQNSQEEVEKDKVEGDIDSEENTSE 237

[Close]

BLAST of CsGy4G017780 vs. Swiss-Prot
Match: sp|Q59984|GRPE_SYNE7 (Protein GrpE OS=Synechococcus elongatus (strain PCC 7942) OX=1140 GN=grpE PE=3 SV=2)

HSP 1 Score: 141.0 bits (354), Expect = 2.5e-32
Identity = 68/140 (48.57%), Postives = 101/140 (72.14%), Query Frame = 0


Query: 165 ELSVEKDRVLRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVET 224
           EL  +    LR++ADF+NFR+RT +ER  L   ++   +  LL V+DNF+RARAQIK + 
Sbjct: 56  ELDEQNSAYLRLAADFENFRRRTLKEREELELQSKRTTITELLPVIDNFDRARAQIKPQG 115

Query: 225 EGEEKINQSYQSIYKQFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILDE 284
           E  E I++SYQ +YKQ  + L  +GV P+   G+PFDP LH+A++RE++TE  +GI+L+E
Sbjct: 116 EEAEAIHKSYQGLYKQLVDCLKRIGVSPMRAEGQPFDPSLHDAVLREETTEHPDGIVLEE 175

Query: 285 FRKGFLLGDRLLRPSMVKVS 305
            ++G+LLGD +LR ++VKVS
Sbjct: 176 LQRGYLLGDLVLRHALVKVS 195

[Close]

BLAST of CsGy4G017780 vs. Swiss-Prot
Match: sp|Q8YUA7|GRPE_NOSS1 (Protein GrpE OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=grpE PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.2e-32
Identity = 75/168 (44.64%), Postives = 112/168 (66.67%), Query Frame = 0


Query: 157 RKLSSLIEELSVEKDRVLRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERA 216
           +++SSL  +L     + +RI+ADF+N+RKRT++E+  L    +   +  LL ++DNFERA
Sbjct: 82  QQISSLKTQLDERSTQYMRIAADFENYRKRTQKEKEELDLQVKRNTILELLPIVDNFERA 141

Query: 217 RAQIKVETEGEEKINQSYQSIYKQFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEF 276
           R+ +K +TE E  I++SYQ +YKQ  + L  LGV P+   G+ FDP LHEA+MRE + E 
Sbjct: 142 RSHLKPQTESEMTIHKSYQGVYKQLVDSLKRLGVSPMRPEGQEFDPNLHEAVMREPTDEH 201

Query: 277 EEGIILDEFRKGFLLGDRLLRPSMVKVSAGPGPEKSDETAPAEKLDSS 325
            EG +L+E  +G+ LGDR+LR SMVKV+A       ++T PA++  SS
Sbjct: 202 PEGTVLEELVRGYYLGDRVLRHSMVKVAA-----PKEDTLPAQENQSS 244

[Close]

BLAST of CsGy4G017780 vs. Swiss-Prot
Match: sp|B7KLH9|GRPE_CYAP7 (Protein GrpE OS=Cyanothece sp. (strain PCC 7424) OX=65393 GN=grpE PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 9.3e-32
Identity = 69/163 (42.33%), Postives = 110/163 (67.48%), Query Frame = 0


Query: 164 EELSVEKDRVLRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVE 223
           +++   K R + ++A+FDNFRKRT RE+  L K A+ + +  LL V+DNFERAR QIK  
Sbjct: 121 QQIDAAKRRYIGLAAEFDNFRKRTLREKEELEKQAKRKTLSELLTVVDNFERARLQIKPS 180

Query: 224 TEGEEKINQSYQSIYKQFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILD 283
            EGE +I++SYQ +YK   + L  LGV  +   G+PFDP+ HEA++RE + +F EG +++
Sbjct: 181 NEGEGEIHKSYQGVYKNLVDSLKRLGVSAMRAEGEPFDPMYHEAMLREPTNDFPEGTVIE 240

Query: 284 EFRKGFLLGDRLLRPSMVKVSAGPGPEKSDETAPAEKLDSSEE 327
           +  +G+LL D++LR +MVKV+A   P+ S+  + +E +   ++
Sbjct: 241 QLVRGYLLDDQVLRHAMVKVAAPKEPDSSETESTSESVSDVQQ 283

[Close]

BLAST of CsGy4G017780 vs. TrEMBL
Match: tr|A0A0A0L229|A0A0A0L229_CUCSA (GrpE protein homolog OS=Cucumis sativus OX=3659 GN=Csa_4G417510 PE=3 SV=1)

HSP 1 Score: 611.7 bits (1576), Expect = 9.9e-172
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0


Query: 1   MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP 60
           MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP
Sbjct: 1   MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP 60

Query: 61  KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVII 120
           KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVII
Sbjct: 61  KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVII 120

Query: 121 AALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISADF 180
           AALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISADF
Sbjct: 121 AALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISADF 180

Query: 181 DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 240
           DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ
Sbjct: 181 DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 240

Query: 241 FTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPSM 300
           FTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPSM
Sbjct: 241 FTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPSM 300

Query: 301 VKVSAGPGPEKSDETAPAEKLDSSEEFANSESESS 336
           VKVSAGPGPEKSDETAPAEKLDSSEEFANSESESS
Sbjct: 301 VKVSAGPGPEKSDETAPAEKLDSSEEFANSESESS 335

[Close]

BLAST of CsGy4G017780 vs. TrEMBL
Match: tr|A0A1S3C2C6|A0A1S3C2C6_CUCME (GrpE protein homolog OS=Cucumis melo OX=3656 GN=LOC103495867 PE=3 SV=1)

HSP 1 Score: 591.7 bits (1524), Expect = 1.1e-165
Identity = 324/335 (96.72%), Postives = 331/335 (98.81%), Query Frame = 0


Query: 1   MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP 60
           MATLLRTPFFQAT PASVSAFSLSKSTLKPSSLSFTTSHSFIC  NSSKFSTRPPSLRFP
Sbjct: 1   MATLLRTPFFQATAPASVSAFSLSKSTLKPSSLSFTTSHSFICSINSSKFSTRPPSLRFP 60

Query: 61  KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVII 120
           KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVN EDSTQSVI+
Sbjct: 61  KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNAEDSTQSVIV 120

Query: 121 AALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISADF 180
           AALQSYKQAL+DN+GAQ+VEIESFLKSIEDEKLAVERKL+SLIEELSVEKDRVLRISADF
Sbjct: 121 AALQSYKQALSDNNGAQIVEIESFLKSIEDEKLAVERKLNSLIEELSVEKDRVLRISADF 180

Query: 181 DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 240
           DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ
Sbjct: 181 DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 240

Query: 241 FTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPSM 300
           FTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFE+GIILDEFRKGFLLGDRLLRPSM
Sbjct: 241 FTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEDGIILDEFRKGFLLGDRLLRPSM 300

Query: 301 VKVSAGPGPEKSDETAPAEKLDSSEEFANSESESS 336
           VKVSAGPGPEKSDETAPAE+LDSSEEFANSESESS
Sbjct: 301 VKVSAGPGPEKSDETAPAEELDSSEEFANSESESS 335

[Close]

BLAST of CsGy4G017780 vs. TrEMBL
Match: tr|A0A2C9VAR0|A0A2C9VAR0_MANES (GrpE protein homolog OS=Manihot esculenta OX=3983 GN=MANES_09G135400 PE=3 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 7.3e-90
Identity = 191/278 (68.71%), Postives = 227/278 (81.65%), Query Frame = 0


Query: 63  PFASSGETEISELEEEVRDSEAEDSSVSYTGVED-ATSDNDISDDSEVNTEDSTQSVIIA 122
           PF+S GETE +E +E +++ E +DSS    GVED A    D +   EV+ ++   S+I+A
Sbjct: 65  PFSSQGETETAETQETIQEPEVQDSSDDAVGVEDGADQVEDSASSEEVDAKEVAPSIIMA 124

Query: 123 ALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISADFD 182
           +LQSYK+ALA N+ +Q+ EIE+FLKS EDEK+ +ERK++SL EELS+EKDRVLRISADFD
Sbjct: 125 SLQSYKEALASNNESQIAEIEAFLKSFEDEKIELERKVASLTEELSIEKDRVLRISADFD 184

Query: 183 NFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQF 242
           NFRKRTERERLSLV NAQGE+VE+LL VLDNFERA++QIK+ETEGEEKI+ SYQSIYKQF
Sbjct: 185 NFRKRTERERLSLVSNAQGELVESLLPVLDNFERAKSQIKLETEGEEKISNSYQSIYKQF 244

Query: 243 TEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPSMV 302
            EILGSLGVVPVETIG PFDPLLHEAIMREDSTE+EEGIIL+EFRKGF LGDRLLRPSMV
Sbjct: 245 VEILGSLGVVPVETIGHPFDPLLHEAIMREDSTEYEEGIILEEFRKGFKLGDRLLRPSMV 304

Query: 303 KVSAGPGPEKSDETAPAEKLDSSE----EFANSESESS 336
           KVSAGPGP K ++ A +   D +E    E  N E ESS
Sbjct: 305 KVSAGPGPAKPEQEASSGGEDDTENETSEGDNKEPESS 342

[Close]

BLAST of CsGy4G017780 vs. TrEMBL
Match: tr|A0A2P2JTL4|A0A2P2JTL4_RHIMU (GrpE protein homolog OS=Rhizophora mucronata OX=61149 PE=3 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.1e-88
Identity = 201/327 (61.47%), Postives = 241/327 (73.70%), Query Frame = 0


Query: 1   MATLLRT-PFFQATPPASVSAFSLSKSTLKPSSLSFTTSH--SFICCFNSSKFSTRPPSL 60
           MAT L+T PF +  PP + + + +S  + KPS LSF      + I    S +F+ R PSL
Sbjct: 1   MATFLKTLPFRELIPPRTPTTYIVSLKSPKPSCLSFGHKRIGTRISRTGSLRFAVR-PSL 60

Query: 61  RFPK-RPFASSGETEISELEEEVRDSE--------AEDSSVSYTGVEDATSDNDISDDSE 120
           RF K  PFAS GE E +E E+ V++ E        A  + V     ++  S  D +D  +
Sbjct: 61  RFVKFAPFASQGEAETAETEQAVQEPEIKHDPSDGAAGAKVGGGETQNIASSEDFTDTEK 120

Query: 121 ----VNTEDSTQSVIIAALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIE 180
                + E    S+I+A+L SYK+ALA+ND  ++ EIE+FLKSIEDEK+ +E KL++L E
Sbjct: 121 AQEATDAEKGPSSIIMASLYSYKEALANNDETRIAEIEAFLKSIEDEKIELETKLTALSE 180

Query: 181 ELSVEKDRVLRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVET 240
           ELS+EKDR+LRISADFDNFRKRTERERLSLV NAQGEVVE  L VLDNFERA+AQIKVET
Sbjct: 181 ELSIEKDRILRISADFDNFRKRTERERLSLVTNAQGEVVENFLPVLDNFERAKAQIKVET 240

Query: 241 EGEEKINQSYQSIYKQFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILDE 300
           EGEEK+N SYQ+IYKQF EILGSLGVVPVE IGKPFDPLLHEAIMRE+S EFEEGIIL+E
Sbjct: 241 EGEEKVNNSYQNIYKQFVEILGSLGVVPVEPIGKPFDPLLHEAIMREESVEFEEGIILEE 300

Query: 301 FRKGFLLGDRLLRPSMVKVSAGPGPEK 312
           +RKGF LGDRLLRPSMVKVSAGPGP K
Sbjct: 301 YRKGFKLGDRLLRPSMVKVSAGPGPAK 326

[Close]

BLAST of CsGy4G017780 vs. TrEMBL
Match: tr|A0A0D2VG34|A0A0D2VG34_GOSRA (GrpE protein homolog OS=Gossypium raimondii OX=29730 GN=B456_013G197200 PE=3 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 2.2e-86
Identity = 196/320 (61.25%), Postives = 240/320 (75.00%), Query Frame = 0


Query: 1   MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFN-------SSKFSTR 60
           MA LL+T  F++TP   +S       +L+P SL+  +   F  CF         + + + 
Sbjct: 1   MAVLLKTLPFKSTPLPPLS------PSLRPISLN--SPRPFYVCFKQRLPRTPGALWFSS 60

Query: 61  PPSLRFPKR-PFASS-GETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNT 120
            PSLRF K  PFAS+ GETE +E +EEV + + EDSS     VE+ T+ ++ +D      
Sbjct: 61  SPSLRFVKLVPFASNGGETETAETQEEVEEPQIEDSSDGAVSVEEDTTGDESND-----F 120

Query: 121 EDSTQSVIIAALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKD 180
           ED+  S I++ LQ+YK+ALA ND +++ +IE+FL SIEDEK+ +E+K++SL EELS+EKD
Sbjct: 121 EDAPSSTIVSLLQTYKEALASNDESKVADIEAFLNSIEDEKVDLEKKMASLSEELSIEKD 180

Query: 181 RVLRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKIN 240
           RVLRISADFDNFRKRTERERLSLV N QGEV+E LL VLDNFERA+AQIK+ETEGEEKIN
Sbjct: 181 RVLRISADFDNFRKRTERERLSLVSNTQGEVLENLLPVLDNFERAKAQIKIETEGEEKIN 240

Query: 241 QSYQSIYKQFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLL 300
            SYQSIYKQ  EILGSLGV PV+T+G  FDP+LHEAIMREDSTEFEEGIIL EFRKGF L
Sbjct: 241 NSYQSIYKQLVEILGSLGVEPVKTVGNLFDPMLHEAIMREDSTEFEEGIILQEFRKGFKL 300

Query: 301 GDRLLRPSMVKVSAGPGPEK 312
           G+RLLRPSMVKVSAGPGP K
Sbjct: 301 GERLLRPSMVKVSAGPGPAK 307

The following BLAST results are available for this feature:

BLAST of CsGy4G017780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144308.1	1.5e-171	100.00	PREDICTED: grpE protein homolog, mitochondrial [Cucumis sativus] >KGN54657.1 hyp...	[more]
XP_008455767.1	1.6e-165	96.72	PREDICTED: protein GrpE [Cucumis melo]	[more]
XP_022154525.1	4.3e-142	85.12	uncharacterized protein LOC111021782 isoform X1 [Momordica charantia]	[more]
XP_022966384.1	1.3e-138	83.43	uncharacterized protein LOC111466047 [Cucurbita maxima] >XP_022966385.1 uncharac...	[more]
XP_023517558.1	2.2e-138	83.04	uncharacterized protein LOC111781285 [Cucurbita pepo subsp. pepo] >XP_023517559....	[more]

BLAST of CsGy4G017780 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17710.2	3.1e-78	71.23	Co-chaperone GrpE family protein	[more]
AT1G36390.1	3.1e-46	44.50	Co-chaperone GrpE family protein	[more]

BLAST of CsGy4G017780 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8DJB3\|GRPE_THEEB	5.9e-34	49.31	Protein GrpE OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=grpE PE...	[more]
sp\|A2BNE2\|GRPE_PROMS	1.9e-32	41.01	Protein GrpE OS=Prochlorococcus marinus (strain AS9601) OX=146891 GN=grpE PE=3 S...	[more]
sp\|Q59984\|GRPE_SYNE7	2.5e-32	48.57	Protein GrpE OS=Synechococcus elongatus (strain PCC 7942) OX=1140 GN=grpE PE=3 S...	[more]
sp\|Q8YUA7\|GRPE_NOSS1	3.2e-32	44.64	Protein GrpE OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 G...	[more]
sp\|B7KLH9\|GRPE_CYAP7	9.3e-32	42.33	Protein GrpE OS=Cyanothece sp. (strain PCC 7424) OX=65393 GN=grpE PE=3 SV=1	[more]

BLAST of CsGy4G017780 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L229\|A0A0A0L229_CUCSA	9.9e-172	100.00	GrpE protein homolog OS=Cucumis sativus OX=3659 GN=Csa_4G417510 PE=3 SV=1	[more]
tr\|A0A1S3C2C6\|A0A1S3C2C6_CUCME	1.1e-165	96.72	GrpE protein homolog OS=Cucumis melo OX=3656 GN=LOC103495867 PE=3 SV=1	[more]
tr\|A0A2C9VAR0\|A0A2C9VAR0_MANES	7.3e-90	68.71	GrpE protein homolog OS=Manihot esculenta OX=3983 GN=MANES_09G135400 PE=3 SV=1	[more]
tr\|A0A2P2JTL4\|A0A2P2JTL4_RHIMU	3.1e-88	61.47	GrpE protein homolog OS=Rhizophora mucronata OX=61149 PE=3 SV=1	[more]
tr\|A0A0D2VG34\|A0A0D2VG34_GOSRA	2.2e-86	61.25	GrpE protein homolog OS=Gossypium raimondii OX=29730 GN=B456_013G197200 PE=3 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0000774	adenyl-nucleotide exchange factor activity
GO:0051087	chaperone binding
GO:0042803	protein homodimerization activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding

Vocabulary: **INTERPRO**
Term	Definition
IPR013805	GrpE_coiled_coil
IPR009012	GrpE_head
IPR000740	GrpE

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0005759	mitochondrial matrix
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0000774	adenyl-nucleotide exchange factor activity
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0042803	protein homodimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G017780.1	CsGy4G017780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 65..85
None	No IPR available	COILS	Coil	Coil	coord: 145..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 301..335
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 313..327
None	No IPR available	PANTHER	PTHR21237:SF27	GRPE PROTEIN HOMOLOG	coord: 36..316
IPR000740	GrpE nucleotide exchange factor	PRINTS	PR00773	GRPEPROTEIN	coord: 174..190 score: 48.53 coord: 284..303 score: 47.97 coord: 202..217 score: 41.99 coord: 257..272 score: 48.05
IPR000740	GrpE nucleotide exchange factor	PFAM	PF01025	GrpE	coord: 149..304 e-value: 1.5E-44 score: 151.5
IPR000740	GrpE nucleotide exchange factor	PANTHER	PTHR21237	GRPE PROTEIN	coord: 36..316
IPR000740	GrpE nucleotide exchange factor	PROSITE	PS01071	GRPE	coord: 260..303
IPR000740	GrpE nucleotide exchange factor	HAMAP	MF_01151	GrpE	coord: 76..305 score: 18.027
IPR000740	GrpE nucleotide exchange factor	CDD	cd00446	GrpE	coord: 170..303 e-value: 2.75124E-50 score: 164.987
IPR009012	GrpE nucleotide exchange factor, head	GENE3D	G3DSA:2.30.22.10		coord: 249..305 e-value: 2.6E-19 score: 70.7
IPR009012	GrpE nucleotide exchange factor, head	SUPERFAMILY	SSF51064	Head domain of nucleotide exchange factor GrpE	coord: 251..306
IPR013805	GrpE nucleotide exchange factor, coiled-coil	GENE3D	G3DSA:3.90.20.20		coord: 131..248 e-value: 5.1E-25 score: 89.3
IPR013805	GrpE nucleotide exchange factor, coiled-coil	SUPERFAMILY	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE	coord: 155..249

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy4G017780	Cla012065	Watermelon (97103) v1	cgybwmB317
CsGy4G017780	Csa4G417510	Cucumber (Chinese Long) v2	cgybcuB167
CsGy4G017780	MELO3C019156	Melon (DHL92) v3.5.1	cgybmeB286
CsGy4G017780	ClCG04G006040	Watermelon (Charleston Gray)	cgybwcgB285
CsGy4G017780	CSPI04G18710	Wild cucumber (PI 183967)	cgybcpiB170
CsGy4G017780	CmaCh03G001690	Cucurbita maxima (Rimu)	cgybcmaB534
CsGy4G017780	CmaCh07G011170	Cucurbita maxima (Rimu)	cgybcmaB568
CsGy4G017780	CmoCh03G001980	Cucurbita moschata (Rifu)	cgybcmoB509
CsGy4G017780	CmoCh07G011670	Cucurbita moschata (Rifu)	cgybcmoB542
CsGy4G017780	Lsi01G017400	Bottle gourd (USVL1VR-Ls)	cgyblsiB237
CsGy4G017780	Cp4.1LG19g02320	Cucurbita pepo (Zucchini)	cgybcpeB521
CsGy4G017780	Cp4.1LG10g10790	Cucurbita pepo (Zucchini)	cgybcpeB466
CsGy4G017780	MELO3C019156.2	Melon (DHL92) v3.6.1	cgybmedB286
CsGy4G017780	CsaV3_4G029080	Cucumber (Chinese Long) v3	cgybcucB171
CsGy4G017780	Cla97C04G072600	Watermelon (97103) v2	cgybwmbB285
CsGy4G017780	Bhi03G002091	Wax gourd	cgybwgoB389
CsGy4G017780	Carg13330	Silver-seed gourd	carcgybB0583
CsGy4G017780	Carg26123	Silver-seed gourd	carcgybB0953

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None