CmaCh03G001690 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh03G001690
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	GrpE protein homolog
Location	Cma_Chr03 : 2228524 .. 2231958 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAGTTTCCATAAATTCTTTGGAAAAAGGAAAATCGGGAAATTAATAATATTAATATCATTTCTCACCAAACCTTTCTCGAACGTCCGACTTTCTTCCTCTCCTCCTTACCCTTATCTCTCTCTTTGCTCTGTAAATTCTCTCATGGCGACGGTTCTCAGAACTCCATTTTTTCAGGCAACTCCTCCGGCAACTGTATCCACAATTTCTTCATCCAAATCCACCCTAAAACCCTTATCTGTATCCTTTAGAACCTCTCACTCTACCATTTGTTGCATCAATTCCTCCAAGTTTTCACTTCGTCCTCGTTCTATCCGGTTCCCGAAGCTCGCCTCGTTTTCTTCCTCCGGTGAAACGGAAATTAGCGAGGTCGAAGAGGAAGTTCGTGAATCTGAGGCTGAGGTATGCTTAATTCTTCTTCTTATTTGGGGCTATTTTACCGTTTGGTTGTTGTATCTTTACCGGACGATTGTAGTTTGACTCTTTAGTTGATTAGGTTGGATAGTGTTGGAGGATATTGTTTTATGCAGAGGAGTTTCTAGGATCGAGTTGTTATGTCTAATATTATCAATTAGTGCGAATTTGCCTCTTGGATTGCTGTTACGAAACAGTTTTGTAAGAAGAAATGCGGTATTCTGGCATTATCTTCAATTCATTGTCTATTTCTGTGTTCTAATTATTCTACTTGAATTATCTATGAAGTAAGACATTTGATTCTCAAATCTCACCTTGAATTTATCCACTTGACATTTCAAATTTTTGTGTAAACTAAAAAAAATTGAGTATGAAAGCAGTTTTCGTAGTTCCGGGGCCATTATTCGAGTTTGGTTTAATCATTCCTCTATGTTCTATGCAGCTTTTTGGATACTACAATAATATGATCAAATGATGGGACCATAAGCTCCATTTTCAAGACTAAAATTTAGGTGTGTTGAAATGAAACATGGTCCATGAAGCTTAAACTATGCTCTTTTAAACCTGCAAGTATGGACTATTGATTTTGTTTATTAAAATTTGAAGATTTTGGATATTGGATGCTTAGAGAGTGTAATATCTTCTGACCATGAACAATAAATTCACACAGCACGGATTTTGGTTGTTTTAATTAAGTTTATACTGAAATCATGTCATTGTTCTTTCTTGTTGCTCATATATTTATTTTACAGGACTCTTCTGTTAGTTATACTGGTGTGGAAGATGCTGCAAGTGATAGTGATATAAATGATGATGCAGAAGTTAATGCTGAGGATGTAGCTCAGTCAGTTATTATATCAGCACTTCAATCCTATAAGCAGGCTTTAGCAGATAACAATGGAGCTCAAATAGTTGAAATAGAGTCATATCTGAAGTCTATCGAAGATGACAAGTTCGCAGTTGAAAAGAAGTTGGAATCCCTAACCGAAGAACTCTCTGCAGAGAAGGTTCGAATTTTGAGGATCAGTGCCGACTTCGATAATTTTAGGAAGAGAACAGAGAGAGAACGTCTTTCATTGGTGAAAAATGCTCAAGGGGAAGTGGTAGAGACGTTATTGGGTGTCCTGGATAATTTTGAGAGAGCTAGGGCACAGATCAAAGTGGAGACAGAGGGAGAAGAAAAGATCAATCAGAGTTACCAGAGCATCTATAAGCAGTTCAATGAGATTTTGGGCTCATTGGGTGTAGTTCCTGTTGAGACAATTGGGAAACATTTTGACCCATTGGTGAGTTCTTGCTTCTTGTCATCTTATTGAATTTGCATCTCATGTACCTCATTTTCCCTTTATTCATCAAAGTTAAGTCACCATTAATCAGTCAGTGGTGCTAATTACTGAACTTGTTAATAATTGATGAACCTGTTTTCTAAATCAAATTGTTTAAATTGTTTTGTTCTTAGAGTATCTGCACATGACGGATTTATTTAAGCAACTTGATGAGTAAAATGGTGGTATTTAGTTAATACCGACTCTAGAAACTAGGAAAGTGTAGGGTCTTTCCTTGCAGACCTTACAATCATTACTGGATGAACTTTCCTGAAATCTGAATTTTGAATCTCAAATATGAATATGGTATGAACTCACCTGTTGGGATTCATTTATTTTTGTAGATTTTGACCATAGGAAAACTAAGACTTGTGATCTTTTTCTCTCATTTTTGTTTTGCACTGATAATGATAAGAGGGTAAACCATAATTTATTTCATTGTGTTCATTGCAAAAAGTATGTGATGTAAATTATCTGTGGAGTAACCTGGATCCATCCATAAGAAGTGATGCATCTTATAATGGGTTATTTTTCATGGAAAAGGATCAAAGAAGAGAAAGTTACTTTGGAAGTGTGCTATCTTGGATCCGTTATCGGTTTTATGGTTGGAGATCGATAAAAGAATTATTGAAGATAAATTTGAAGATCTAGACAAGGTTCAGAGTGAATCTGATAGTGTACATTGTTGGTGCAAAAAGGTAGAAGACTTTACTAGTTCTACCTCTCAGGCTATTTGTTCAAAAGGTGATTTTTTGTCGGTAAATTTATACTTCAAGGAGGCCTTGTCCTCCTGTAATATTGTAACTTATTCAAATTGTTATTATCAATGACAAGGCTACTATTTCTGTCTGATATTGTGATTTTTCGACTACCTTCGATCCGAGGTGATGTATTTTTCTTTTTCGAAATCTATTCGATTTGCATTCTAAACTAGCATGACATGATCAAACATGGAACTAATCAGGGTTCTGCTGTTTAATCTCTCTTTTTGGGGATCAAGTTTGGTAAGTTGAAACTTCTTTAATCAATTTCTTGCCTACAGCTTCATGAAGCAATTATGAGGGAGGACTCCACAGAGTTTGAGGAAGGCATCATACTCGACGAGTTCCGCAAAGGATTCTTGCTTGGTGAGAGACTCCTGCGTCCATCAATGGTGAAAGTATCAGCCGGTCCAGGGCCTGAAAAGTCGGATGAAGCAGCAGCATCAGAAGAACATGATTCGAGTGAAAACTCGGAGGGCTCCGAATCGGAGTCTTCTTAAAAACTCGAATGAACACAGTCCAATTTTGAATATAGTTTTTGAATCTTCTTTGTGGGTGATAAGAGATTGGAGATGGAGTTTATTGTTGTTCTTGGTTGTCAGGCTTTTGCAGGCGGAGAATTTAGATATTTGTTCTCAGGGGATAGCTTTTGACGGTGAAAAATGGTTGGTTCCGGGAAGGAAGTGTTAGTGGAATGTTGTACTTGATTTAGATATTACTATAACTTGTAGAAATGGTTGAATGTGCCTTGATGTCTGAGGTCTCCTCTGTAGGACCATATTTATTTGAAGGAAATTGAAATCACTCTCTCTTTCATTGTTATTTCTGTTCATTATTAACTTAAAAACTTCTATTAGGGAATGGATGGACTGAATAATTGTTTTCAATGTAGCTTGACCTATTTGGAGATCAGAAGTAATATTCTTATTTTCGCTA

mRNA sequence

TAAGTTTCCATAAATTCTTTGGAAAAAGGAAAATCGGGAAATTAATAATATTAATATCATTTCTCACCAAACCTTTCTCGAACGTCCGACTTTCTTCCTCTCCTCCTTACCCTTATCTCTCTCTTTGCTCTGTAAATTCTCTCATGGCGACGGTTCTCAGAACTCCATTTTTTCAGGCAACTCCTCCGGCAACTGTATCCACAATTTCTTCATCCAAATCCACCCTAAAACCCTTATCTGTATCCTTTAGAACCTCTCACTCTACCATTTGTTGCATCAATTCCTCCAAGTTTTCACTTCGTCCTCGTTCTATCCGGTTCCCGAAGCTCGCCTCGTTTTCTTCCTCCGGTGAAACGGAAATTAGCGAGGTCGAAGAGGAAGTTCGTGAATCTGAGGCTGAGGACTCTTCTGTTAGTTATACTGGTGTGGAAGATGCTGCAAGTGATAGTGATATAAATGATGATGCAGAAGTTAATGCTGAGGATGTAGCTCAGTCAGTTATTATATCAGCACTTCAATCCTATAAGCAGGCTTTAGCAGATAACAATGGAGCTCAAATAGTTGAAATAGAGTCATATCTGAAGTCTATCGAAGATGACAAGTTCGCAGTTGAAAAGAAGTTGGAATCCCTAACCGAAGAACTCTCTGCAGAGAAGGTTCGAATTTTGAGGATCAGTGCCGACTTCGATAATTTTAGGAAGAGAACAGAGAGAGAACGTCTTTCATTGGTGAAAAATGCTCAAGGGGAAGTGGTAGAGACGTTATTGGGTGTCCTGGATAATTTTGAGAGAGCTAGGGCACAGATCAAAGTGGAGACAGAGGGAGAAGAAAAGATCAATCAGAGTTACCAGAGCATCTATAAGCAGTTCAATGAGATTTTGGGCTCATTGGGTGTAGTTCCTGTTGAGACAATTGGGAAACATTTTGACCCATTGCTTCATGAAGCAATTATGAGGGAGGACTCCACAGAGTTTGAGGAAGGCATCATACTCGACGAGTTCCGCAAAGGATTCTTGCTTGGTGAGAGACTCCTGCGTCCATCAATGGTGAAAGTATCAGCCGGTCCAGGGCCTGAAAAGTCGGATGAAGCAGCAGCATCAGAAGAACATGATTCGAGTGAAAACTCGGAGGGCTCCGAATCGGAGTCTTCTTAAAAACTCGAATGAACACAGTCCAATTTTGAATATAGTTTTTGAATCTTCTTTGTGGGTGATAAGAGATTGGAGATGGAGTTTATTGTTGTTCTTGGTTGTCAGGCTTTTGCAGGCGGAGAATTTAGATATTTGTTCTCAGGGGATAGCTTTTGACGGTGAAAAATGGTTGGTTCCGGGAAGGAAGTGTTAGTGGAATGTTGTACTTGATTTAGATATTACTATAACTTGTAGAAATGGTTGAATGTGCCTTGATGTCTGAGGTCTCCTCTGTAGGACCATATTTATTTGAAGGAAATTGAAATCACTCTCTCTTTCATTGTTATTTCTGTTCATTATTAACTTAAAAACTTCTATTAGGGAATGGATGGACTGAATAATTGTTTTCAATGTAGCTTGACCTATTTGGAGATCAGAAGTAATATTCTTATTTTCGCTA

Coding sequence (CDS)

ATGGCGACGGTTCTCAGAACTCCATTTTTTCAGGCAACTCCTCCGGCAACTGTATCCACAATTTCTTCATCCAAATCCACCCTAAAACCCTTATCTGTATCCTTTAGAACCTCTCACTCTACCATTTGTTGCATCAATTCCTCCAAGTTTTCACTTCGTCCTCGTTCTATCCGGTTCCCGAAGCTCGCCTCGTTTTCTTCCTCCGGTGAAACGGAAATTAGCGAGGTCGAAGAGGAAGTTCGTGAATCTGAGGCTGAGGACTCTTCTGTTAGTTATACTGGTGTGGAAGATGCTGCAAGTGATAGTGATATAAATGATGATGCAGAAGTTAATGCTGAGGATGTAGCTCAGTCAGTTATTATATCAGCACTTCAATCCTATAAGCAGGCTTTAGCAGATAACAATGGAGCTCAAATAGTTGAAATAGAGTCATATCTGAAGTCTATCGAAGATGACAAGTTCGCAGTTGAAAAGAAGTTGGAATCCCTAACCGAAGAACTCTCTGCAGAGAAGGTTCGAATTTTGAGGATCAGTGCCGACTTCGATAATTTTAGGAAGAGAACAGAGAGAGAACGTCTTTCATTGGTGAAAAATGCTCAAGGGGAAGTGGTAGAGACGTTATTGGGTGTCCTGGATAATTTTGAGAGAGCTAGGGCACAGATCAAAGTGGAGACAGAGGGAGAAGAAAAGATCAATCAGAGTTACCAGAGCATCTATAAGCAGTTCAATGAGATTTTGGGCTCATTGGGTGTAGTTCCTGTTGAGACAATTGGGAAACATTTTGACCCATTGCTTCATGAAGCAATTATGAGGGAGGACTCCACAGAGTTTGAGGAAGGCATCATACTCGACGAGTTCCGCAAAGGATTCTTGCTTGGTGAGAGACTCCTGCGTCCATCAATGGTGAAAGTATCAGCCGGTCCAGGGCCTGAAAAGTCGGATGAAGCAGCAGCATCAGAAGAACATGATTCGAGTGAAAACTCGGAGGGCTCCGAATCGGAGTCTTCTTAA

Protein sequence

MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHSTICCINSSKFSLRPRSIRFPKLASFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDINDDAEVNAEDVAQSVIISALQSYKQALADNNGAQIVEIESYLKSIEDDKFAVEKKLESLTEELSAEKVRILRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQFNEILGSLGVVPVETIGKHFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGERLLRPSMVKVSAGPGPEKSDEAAASEEHDSSENSEGSESESS

Homology

[Close]

BLAST of CmaCh03G001690 vs. Swiss-Prot
Match: GRPE_SYNS9 (Protein GrpE OS=Synechococcus sp. (strain CC9902) GN=grpE PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 7.1e-32
Identity = 72/168 (42.86%), Postives = 112/168 (66.67%), Query Frame = 1


Query: 156 VEKKLESLTEELSAEKVRILRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFE 215
           +E++L SL +E  A + + +RI+ADFDNFRKR  R++  L +      +  +L V+DNFE
Sbjct: 54  LEQELNSLKQEHEAVQSQYMRIAADFDNFRKRQARDQDDLRQQLVCSTLTEILPVVDNFE 113

Query: 216 RARAQIKVETEGEEKINQSYQSIYKQFNEILGSLGVVPVETIGKHFDPLLHEAIMREDST 275
           RAR Q+  E E  + +++SYQ +YKQ  ++L   GV  +E +G+ FDP LHEA++RE++ 
Sbjct: 114 RARQQLNPEGEEAQALHRSYQGLYKQLVDVLKQQGVARMEVVGQEFDPTLHEAVLREENQ 173

Query: 276 EFEEGIILDEFRKGFLLGERLLRPSMVKVSAGPGPEKSDEAAASEEHD 324
           E  E I+ +E ++G+    R+LR +MVKVS GPGPE S +AA+ +  +
Sbjct: 174 EHAEDIVCEELQRGYHRDGRVLRHAMVKVSMGPGPESSSDAASEQPQE 221

[Close]

BLAST of CmaCh03G001690 vs. Swiss-Prot
Match: GRPE_SYNPX (Protein GrpE OS=Synechococcus sp. (strain WH8102) GN=grpE PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 9.2e-32
Identity = 71/170 (41.76%), Postives = 114/170 (67.06%), Query Frame = 1


Query: 156 VEKKLESLTEELSAEKVRILRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFE 215
           +E +L++L +E    + + +RI+ADFDNFRKR  R++  + +      +  +L V+DNFE
Sbjct: 49  LEHELQTLKQEHETLQSQYMRIAADFDNFRKRQSRDQEDIRQQLVCSTLSEILPVVDNFE 108

Query: 216 RARAQIKVETEGEEKINQSYQSIYKQFNEILGSLGVVPVETIGKHFDPLLHEAIMREDST 275
           RAR Q+  E+E  + +++SYQ +YKQ  ++L   GV  +E +G+ FDP LHEA++RE+ST
Sbjct: 109 RARQQLNPESEEAQALHRSYQGLYKQLVDVLKQQGVARMEVVGQLFDPTLHEAVLREEST 168

Query: 276 EFEEGIILDEFRKGFLLGERLLRPSMVKVSAGPGPEKSDEAAASEEHDSS 326
           E  E ++++E ++G+ L  ++LR ++VKVS GPGP    E AAS E + S
Sbjct: 169 EQPEDVVIEELQRGYHLNGKVLRHALVKVSMGPGPSADAEGAASAEAEDS 218

[Close]

BLAST of CmaCh03G001690 vs. Swiss-Prot
Match: GRPE_CYAP7 (Protein GrpE OS=Cyanothece sp. (strain PCC 7424) GN=grpE PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.2e-31
Identity = 71/166 (42.77%), Postives = 113/166 (68.07%), Query Frame = 1


Query: 155 AVEKKLESLTEELSAEKVRILRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNF 214
           +++ +LE   +++ A K R + ++A+FDNFRKRT RE+  L K A+ + +  LL V+DNF
Sbjct: 111 SLKDQLEEQNQQIDAAKRRYIGLAAEFDNFRKRTLREKEELEKQAKRKTLSELLTVVDNF 170

Query: 215 ERARAQIKVETEGEEKINQSYQSIYKQFNEILGSLGVVPVETIGKHFDPLLHEAIMREDS 274
           ERAR QIK   EGE +I++SYQ +YK   + L  LGV  +   G+ FDP+ HEA++RE +
Sbjct: 171 ERARLQIKPSNEGEGEIHKSYQGVYKNLVDSLKRLGVSAMRAEGEPFDPMYHEAMLREPT 230

Query: 275 TEFEEGIILDEFRKGFLLGERLLRPSMVKVSAGPGPEKSDEAAASE 321
            +F EG ++++  +G+LL +++LR +MVKV+A   P+ S+  + SE
Sbjct: 231 NDFPEGTVIEQLVRGYLLDDQVLRHAMVKVAAPKEPDSSETESTSE 276

[Close]

BLAST of CmaCh03G001690 vs. Swiss-Prot
Match: GRPE_THEEB (Protein GrpE OS=Thermosynechococcus elongatus (strain BP-1) GN=grpE PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.6e-31
Identity = 74/172 (43.02%), Postives = 116/172 (67.44%), Query Frame = 1


Query: 155 AVEKKLESLTEELSAEKVRILRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNF 214
           A+E    SL++ +     + +R++ADF+NFRKRT+RE+  L    +  V+  LL V+D+F
Sbjct: 82  ALEAAKASLSQVVEERNSQYIRLAADFENFRKRTQREKEELELQIKCSVIADLLPVVDSF 141

Query: 215 ERARAQIKVETEGEEKINQSYQSIYKQFNEILGSLGVVPVETIGKHFDPLLHEAIMREDS 274
           E AR  I+ ETE EEKI++SYQ +YKQ  E L  +GV  ++  GK FDP LHEA++RE +
Sbjct: 142 ELARTHIQTETEAEEKIHRSYQGVYKQLVECLKRIGVSAMQAKGKPFDPNLHEAVLREAT 201

Query: 275 TEFEEGIILDEFRKGFLLGERLLRPSMVKVSAGPGPEKSDEAAASEEHDSSE 327
            E  EG +++E ++G++LG+R+LR +MVKV+A P     +E +AS  + +++
Sbjct: 202 NEHPEGTVIEELKRGYMLGDRVLRHAMVKVAAPP-----EEGSASNTNPTND 248

[Close]

BLAST of CmaCh03G001690 vs. Swiss-Prot
Match: GRPE_SYNY3 (Protein GrpE OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=grpE PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.1e-31
Identity = 70/166 (42.17%), Postives = 108/166 (65.06%), Query Frame = 1


Query: 143 ESYLKSIEDDKFAVEKKLESLTEELSAEKVRILRISADFDNFRKRTERERLSLVKNAQGE 202
           E  +  ++ D  +  ++L   +E+L + K R + ++A+FDNFRKRT+RE+    K  +G 
Sbjct: 69  EEIIAILQKDLASHRQELAEQSEQLDSIKKRYVALAAEFDNFRKRTQREKEEQAKLIKGR 128

Query: 203 VVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQFNEILGSLGVVPVETIGKHFD 262
            +  LL V+DNFERAR QIK  ++GE +I++SYQ +YK   + L  LGV P+   GK FD
Sbjct: 129 TITELLPVVDNFERARTQIKPNSDGENQIHKSYQGVYKNLVDSLKGLGVAPMRPEGKPFD 188

Query: 263 PLLHEAIMREDSTEFEEGIILDEFRKGFLLGERLLRPSMVKVSAGP 309
           P  HEA++RE + E+ E  +++E  +G+LL + +LR SMVKV+  P
Sbjct: 189 PKYHEAMLREPTAEYPEDTVIEELVRGYLLDDIVLRHSMVKVAVAP 234

[Close]

BLAST of CmaCh03G001690 vs. TrEMBL
Match: A0A0A0L229_CUCSA (GrpE protein homolog OS=Cucumis sativus GN=Csa_4G417510 PE=3 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 2.2e-141
Identity = 286/336 (85.12%), Postives = 306/336 (91.07%), Query Frame = 1


Query: 1   MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHSTICCINSSKFSLRPRSIRFP 60
           MAT+LRTPFFQATPPA+VS  S SKSTLKP S+SF TSHS ICC NSSKFS RP S+RFP
Sbjct: 1   MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP 60

Query: 61  KLASFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDINDDAEVNAEDVAQSVI 120
           K   F+SSGETEISE+EEEVR+SEAEDSSVSYTGVEDA SD+DI+DD+EVN ED  QSVI
Sbjct: 61  K-RPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVI 120

Query: 121 ISALQSYKQALADNNGAQIVEIESYLKSIEDDKFAVEKKLESLTEELSAEKVRILRISAD 180
           I+ALQSYKQALADN+GAQ+VEIES+LKSIED+K AVE+KL SL EELS EK R+LRISAD
Sbjct: 121 IAALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISAD 180

Query: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240
           FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK
Sbjct: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240

Query: 241 QFNEILGSLGVVPVETIGKHFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGERLLRPS 300
           QF EILGSLGVVPVETIGK FDPLLHEAIMREDSTEFEEGIILDEFRKGFLLG+RLLRPS
Sbjct: 241 QFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPS 300

Query: 301 MVKVSAGPGPEKSDEAAASEEHDSSENSEGSESESS 337
           MVKVSAGPGPEKSDE A +E+ DSSE    SESESS
Sbjct: 301 MVKVSAGPGPEKSDETAPAEKLDSSEEFANSESESS 335

[Close]

BLAST of CmaCh03G001690 vs. TrEMBL
Match: M5VQG4_PRUPE (GrpE protein homolog OS=Prunus persica GN=PRUPE_ppa008162mg PE=3 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 1.4e-90
Identity = 219/346 (63.29%), Postives = 261/346 (75.43%), Query Frame = 1


Query: 1   MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHS---TICCINSSKFSLRPRSI 60
           MA VLRT    AT     ST+S +    KP  VSFR S S       ++S +F   P S+
Sbjct: 1   MANVLRTSPLGATFAQLPSTLSPNSP--KPSYVSFRQSQSGSIPYLTLSSLRFPHLP-SL 60

Query: 61  RFPKLASFSSSGETEISEVEEEVRE-SEAEDSSVSYTGVEDAASD---SDINDDAEVNAE 120
           RF K    +S GETE +E  EEVR+  E EDSS     VED+ SD   S  ++D E +AE
Sbjct: 61  RFAKFVPLASQGETETTETVEEVRQPEEIEDSSDGAVSVEDSTSDGEESGTSNDDEGDAE 120

Query: 121 DVAQSVIISALQSYKQALADNNGAQIVEIESYLKSIEDDKFAVEKKLESLTEELSAEKVR 180
           +   S II++LQ YK+ALA N+ +++ EIES+LK IED+K ++EKK+ SL+EELSAEKVR
Sbjct: 121 EKPVSAIIASLQLYKEALASNDESKVAEIESFLKYIEDEKISLEKKVASLSEELSAEKVR 180

Query: 181 ILRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQ 240
           ILRISADF+NFRKRT+RER+SLV NAQGEVVE+LL V+DNFERA+ QIKVETEGEEKIN 
Sbjct: 181 ILRISADFENFRKRTDRERISLVTNAQGEVVESLLPVVDNFERAKTQIKVETEGEEKINN 240

Query: 241 SYQSIYKQFNEILGSLGVVPVETIGKHFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLG 300
           SYQSIYKQF EIL SLGVVPVET+GK FDPLLHEAIMREDSTEFEEG+I+DEFRKGF LG
Sbjct: 241 SYQSIYKQFGEILSSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGVIIDEFRKGFKLG 300

Query: 301 ERLLRPSMVKVSAGPGPEKSD-EAAASEEHDSSENS-EGS-ESESS 337
           +RLLRPSMVKVSAGPGP K D +   SEE D+SE + EGS E+ES+
Sbjct: 301 DRLLRPSMVKVSAGPGPAKPDQQVPPSEEQDASETTKEGSTETESA 343

[Close]

BLAST of CmaCh03G001690 vs. TrEMBL
Match: A0A067L6A9_JATCU (GrpE protein homolog OS=Jatropha curcas GN=JCGZ_02644 PE=3 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 1.7e-88
Identity = 207/344 (60.17%), Postives = 260/344 (75.58%), Query Frame = 1


Query: 1   MATVLRTPFFQATPPATVSTISSSKSTLK---PLSVSFR-----TSHSTICCINSSKFSL 60
           MATVL+TP  +A  P  + T +++  +L+   P  +SFR     T  S   C+   +F +
Sbjct: 1   MATVLKTPPLRAQVPPRLITTATNNLSLQSPNPFCLSFRRRSISTEVSRTSCL---RFPV 60

Query: 61  RPRSIRFPKLASFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASD-SDINDDAEVN 120
           +  S RF K   F++ GETE +E EE ++E E +DSS    GVE +A +  D +   E +
Sbjct: 61  KS-SHRFIKFVPFATQGETETTETEETIQEPEIQDSSDGAVGVEGSADELEDSSSSEEAD 120

Query: 121 AEDVAQSVIISALQSYKQALADNNGAQIVEIESYLKSIEDDKFAVEKKLESLTEELSAEK 180
               A SVI+++LQSYK+ALA N+ ++IVEIE++LKS+ED+K  +E+K+ SL+++LS EK
Sbjct: 121 DTKEAPSVILASLQSYKEALASNDESKIVEIEAFLKSVEDEKINLEQKVVSLSQDLSTEK 180

Query: 181 VRILRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKI 240
            RILRISADFDNFRKRTERERLSL+ NAQGEVVE+LL VLDNFERA++QIK+ETEGEEKI
Sbjct: 181 DRILRISADFDNFRKRTERERLSLLTNAQGEVVESLLPVLDNFERAKSQIKLETEGEEKI 240

Query: 241 NQSYQSIYKQFNEILGSLGVVPVETIGKHFDPLLHEAIMREDSTEFEEGIILDEFRKGFL 300
           N SYQSIYKQF EILGSLGVVPVETIGK FDPLL EAIMREDSTEFEEGIILDEFRKGF 
Sbjct: 241 NNSYQSIYKQFVEILGSLGVVPVETIGKPFDPLLQEAIMREDSTEFEEGIILDEFRKGFK 300

Query: 301 LGERLLRPSMVKVSAGPGPEKSDEAAA-SEEHDSSENSEGSESE 335
           LG+RLLRP+MVKVSAGPGP K++EA +  E   +SE +E S +E
Sbjct: 301 LGDRLLRPAMVKVSAGPGPAKAEEAGSPGEAETASETNEESAAE 340

[Close]

BLAST of CmaCh03G001690 vs. TrEMBL
Match: B9I664_POPTR (GrpE protein homolog OS=Populus trichocarpa GN=POPTR_0013s06430g PE=3 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 1.4e-87
Identity = 203/341 (59.53%), Postives = 246/341 (72.14%), Query Frame = 1


Query: 1   MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSF-----RTSHSTICCINSSKFSLRPR 60
           MATV++TP F A  P  ++  S S     PL +SF     R+  +     NS +F  +P 
Sbjct: 1   MATVIKTPPFSA--PRIINNSSISLKYANPLCLSFSHNNNRSIPNFSLAKNSLRFPTKP- 60

Query: 61  SIRFPKLASFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDINDDAEVNAEDV 120
           S+RF K   FSS GETE +E EE ++E E EDSS     VEDAAS  ++    EV   + 
Sbjct: 61  SLRFVKFVPFSSQGETETTETEETIQEPEIEDSSDGAVEVEDAASSEEVASSEEVADAED 120

Query: 121 AQSVIISALQSYKQALADNNGAQIVEIESYLKSIEDDKFAVEKKLESLTEELSAEKVRIL 180
             SV++++L+SYK+ALA N+ + I EIE++LKS+ED+K   E+K+ SLTEELS EK R+L
Sbjct: 121 TSSVVMASLRSYKEALASNDESIIAEIEAFLKSVEDEKIDNERKVASLTEELSIEKERVL 180

Query: 181 RISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSY 240
           RISADFDNFRKRTERERLSLV NAQGEVVE LL VLDNFERA+ QIK  TEGEEKIN SY
Sbjct: 181 RISADFDNFRKRTERERLSLVTNAQGEVVENLLSVLDNFERAKTQIKTATEGEEKINNSY 240

Query: 241 QSIYKQFNEILGSLGVVPVETIGKHFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGER 300
           Q+IYKQF EIL SLGVVPVETIGK FDP+LHEAIMREDS  FEEG +L+E+RKGF LG+R
Sbjct: 241 QNIYKQFMEILVSLGVVPVETIGKPFDPMLHEAIMREDSDAFEEGTVLEEYRKGFKLGDR 300

Query: 301 LLRPSMVKVSAGPGPEKSDEAAASEE--HDSSENSEGSESE 335
           LLRPSMVKVSAGPGP K ++   S+E    +S  SEG  +E
Sbjct: 301 LLRPSMVKVSAGPGPVKPEQVEESQEEAEATSGTSEGGSTE 338

[Close]

BLAST of CmaCh03G001690 vs. TrEMBL
Match: A0A067DUF0_CITSI (GrpE protein homolog OS=Citrus sinensis GN=CISIN_1g019043mg PE=3 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 3.5e-86
Identity = 207/350 (59.14%), Postives = 254/350 (72.57%), Query Frame = 1


Query: 1   MATVLRTPFFQATP-PATVSTISSSKSTLKPLSVSFRTSHSTICCINSSKFSLR---PRS 60
           MATV++TP F A+  PAT +   S KS  KP+ +SFR    +   +     SLR    +S
Sbjct: 1   MATVIKTPPFHASSLPATRAAPISLKSP-KPICLSFRQRLISTSRLYHRSNSLRFVSVQS 60

Query: 61  IRFPKLASFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDIN---DDAEVNAE 120
           +RF K +  +S+GETE +E +EE++E + E+SS    G+ED  SD D +    D   +AE
Sbjct: 61  LRFIKFSPLASTGETETTETQEEIQEPQIEESSDGAVGIEDGTSDDDSSGAASDDTSDAE 120

Query: 121 DVAQSVIISALQSYKQALADNNGAQIVEIESYLKSIEDDKFAVEKKLESLTEELSAEKVR 180
           +   S I+  LQSYK+ALA N+  +  EIE+ LKS ED+K  +E+K+ +L+EELSAE+ R
Sbjct: 121 EAPTSFIMETLQSYKEALASNDDTKAAEIEALLKSFEDEKIDLERKVVNLSEELSAERAR 180

Query: 181 ILRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQ 240
           ILRISADFDNFRKRTE+ERLSLV NAQGEV+E LL VLDNFERA+ QIKV+TEGEEKIN 
Sbjct: 181 ILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINN 240

Query: 241 SYQSIYKQFNEILGSLGVVPVETIGKHFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLG 300
           SYQSIYKQ  EILGSLGVVPVET+G  FDPLLHEAIMREDSTEF+EG+I++EFRKGF LG
Sbjct: 241 SYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLG 300

Query: 301 ERLLRPSMVKVSAGPGPEK-------SDEAAASEEHDSSENSEGSESESS 337
           +RLLRPSMVKVSAGPGP K         EAA  E  DSS  +E  E+ESS
Sbjct: 301 DRLLRPSMVKVSAGPGPAKPKEEQPSEGEAAVVETADSS--TEEVEAESS 347

[Close]

BLAST of CmaCh03G001690 vs. TAIR10
Match: AT5G17710.2 (AT5G17710.2 Co-chaperone GrpE family protein)

HSP 1 Score: 299.7 bits (766), Expect = 2.3e-81
Identity = 191/340 (56.18%), Postives = 237/340 (69.71%), Query Frame = 1


Query: 1   MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHSTICCINSSKFSLRPRSIRFP 60
           MA +L+TP    TP    + + +     KP  VSF    +    + S + SLR  S  +P
Sbjct: 1   MAGLLKTPSLHLTP----TLLHAPSVPFKPFCVSFAGGRNVSVSL-SRRASLRSVSSGYP 60

Query: 61  ----KLASFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDINDDAEVNAEDVA 120
                L  F+S GE E +E E E  E E +++     G  D  +++   ++ E   E+ A
Sbjct: 61  LRLLNLVPFAS-GEAETTETEVESNEPEVQETD----GAVDVENENASAEEGEAEEEEAA 120

Query: 121 QSVIISALQSYKQALADNNGAQIVEIESYLKSIEDDKFAVEKKLESLTEELSAEKVRILR 180
             VI + L+SYK+ALADNN  +I EIE+ LKSIED+KF +  K+ SL+ ELS E+ R++R
Sbjct: 121 --VITALLKSYKEALADNNEGKIAEIEASLKSIEDEKFLLADKVASLSNELSVERDRLIR 180

Query: 181 ISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQ 240
           ISADFDNFRKRTERERL+LV NAQGEVVE LL VLDNFERA++QIKVETEGEEK+  SYQ
Sbjct: 181 ISADFDNFRKRTERERLNLVSNAQGEVVENLLAVLDNFERAKSQIKVETEGEEKVTNSYQ 240

Query: 241 SIYKQFNEILGSLGVVPVETIGKHFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGERL 300
           SIYKQF EILGSLGV+ VET+GK FDP+LHEAIMREDS E+EEGI+L+E+RKGFLLGERL
Sbjct: 241 SIYKQFVEILGSLGVIHVETVGKQFDPMLHEAIMREDSAEYEEGIVLEEYRKGFLLGERL 300

Query: 301 LRPSMVKVSAGPGPEKSDEAAASEEHDSSENSEGSESESS 337
           LRPSMVKVSAGPGPEK  EA   E   +++ S   ES SS
Sbjct: 301 LRPSMVKVSAGPGPEKPLEAEGEEA--TAQGSAEEESSSS 326

[Close]

BLAST of CmaCh03G001690 vs. TAIR10
Match: AT1G36390.1 (AT1G36390.1 Co-chaperone GrpE family protein)

HSP 1 Score: 178.3 bits (451), Expect = 7.7e-45
Identity = 94/213 (44.13%), Postives = 152/213 (71.36%), Query Frame = 1


Query: 105 NDDAEVNAEDVAQSVIISALQSYKQALADNNGAQIVEIESYLKSIEDDKFAVEKKLESLT 164
           N+  E N++   Q+ + + ++SYKQAL + +   + EIE+    IE +K  +++K+ SL+
Sbjct: 62  NNSEEANSKQ--QADVKTLIRSYKQALLNGDETSVTEIETMFCKIEKEKNKMDQKVLSLS 121

Query: 165 EELSAEKVRILRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVE 224
            ++++EK   +R+ ADFDN RK+ +++RLS   NA+ +++++LL ++D+FE+A+ Q++V+
Sbjct: 122 MKIASEKEMKIRLQADFDNTRKKLDKDRLSTESNAKVQILKSLLPIIDSFEKAKLQVRVD 181

Query: 225 TEGEEKINQSYQSIYKQFNEILGSLGVVPVETIGKHFDPLLHEAIMREDSTEFEEGIILD 284
           T+ E+KI+ SYQ IY+QF E+L  L V  + T+GK FDPLLHEAI RE+S   + GII +
Sbjct: 182 TDKEKKIDTSYQGIYRQFVEVLRYLRVSVIATVGKPFDPLLHEAISREESEAVKAGIITE 241

Query: 285 EFRKGFLLGERLLRPSMVKVSAGPGPEKSDEAA 318
           E  KGF+LG+R+LRP+ VKVS GP  +K+  AA
Sbjct: 242 ELNKGFVLGDRVLRPAKVKVSLGPVNKKTPSAA 272

[Close]

BLAST of CmaCh03G001690 vs. NCBI nr
Match: gi|449453123|ref|XP_004144308.1| (PREDICTED: grpE protein homolog, mitochondrial [Cucumis sativus])

HSP 1 Score: 510.0 bits (1312), Expect = 3.2e-141
Identity = 286/336 (85.12%), Postives = 306/336 (91.07%), Query Frame = 1


Query: 1   MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHSTICCINSSKFSLRPRSIRFP 60
           MAT+LRTPFFQATPPA+VS  S SKSTLKP S+SF TSHS ICC NSSKFS RP S+RFP
Sbjct: 1   MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP 60

Query: 61  KLASFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDINDDAEVNAEDVAQSVI 120
           K   F+SSGETEISE+EEEVR+SEAEDSSVSYTGVEDA SD+DI+DD+EVN ED  QSVI
Sbjct: 61  K-RPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVI 120

Query: 121 ISALQSYKQALADNNGAQIVEIESYLKSIEDDKFAVEKKLESLTEELSAEKVRILRISAD 180
           I+ALQSYKQALADN+GAQ+VEIES+LKSIED+K AVE+KL SL EELS EK R+LRISAD
Sbjct: 121 IAALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISAD 180

Query: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240
           FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK
Sbjct: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240

Query: 241 QFNEILGSLGVVPVETIGKHFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGERLLRPS 300
           QF EILGSLGVVPVETIGK FDPLLHEAIMREDSTEFEEGIILDEFRKGFLLG+RLLRPS
Sbjct: 241 QFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPS 300

Query: 301 MVKVSAGPGPEKSDEAAASEEHDSSENSEGSESESS 337
           MVKVSAGPGPEKSDE A +E+ DSSE    SESESS
Sbjct: 301 MVKVSAGPGPEKSDETAPAEKLDSSEEFANSESESS 335

[Close]

BLAST of CmaCh03G001690 vs. NCBI nr
Match: gi|659111503|ref|XP_008455767.1| (PREDICTED: grpE protein homolog, mitochondrial [Cucumis melo])

HSP 1 Score: 508.1 bits (1307), Expect = 1.2e-140
Identity = 286/336 (85.12%), Postives = 306/336 (91.07%), Query Frame = 1


Query: 1   MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHSTICCINSSKFSLRPRSIRFP 60
           MAT+LRTPFFQAT PA+VS  S SKSTLKP S+SF TSHS IC INSSKFS RP S+RFP
Sbjct: 1   MATLLRTPFFQATAPASVSAFSLSKSTLKPSSLSFTTSHSFICSINSSKFSTRPPSLRFP 60

Query: 61  KLASFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDINDDAEVNAEDVAQSVI 120
           K   F+SSGETEISE+EEEVR+SEAEDSSVSYTGVEDA SD+DI+DD+EVNAED  QSVI
Sbjct: 61  K-RPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNAEDSTQSVI 120

Query: 121 ISALQSYKQALADNNGAQIVEIESYLKSIEDDKFAVEKKLESLTEELSAEKVRILRISAD 180
           ++ALQSYKQAL+DNNGAQIVEIES+LKSIED+K AVE+KL SL EELS EK R+LRISAD
Sbjct: 121 VAALQSYKQALSDNNGAQIVEIESFLKSIEDEKLAVERKLNSLIEELSVEKDRVLRISAD 180

Query: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240
           FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK
Sbjct: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240

Query: 241 QFNEILGSLGVVPVETIGKHFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGERLLRPS 300
           QF EILGSLGVVPVETIGK FDPLLHEAIMREDSTEFE+GIILDEFRKGFLLG+RLLRPS
Sbjct: 241 QFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEDGIILDEFRKGFLLGDRLLRPS 300

Query: 301 MVKVSAGPGPEKSDEAAASEEHDSSENSEGSESESS 337
           MVKVSAGPGPEKSDE A +EE DSSE    SESESS
Sbjct: 301 MVKVSAGPGPEKSDETAPAEELDSSEEFANSESESS 335

[Close]

BLAST of CmaCh03G001690 vs. NCBI nr
Match: gi|645270821|ref|XP_008240630.1| (PREDICTED: grpE protein homolog, mitochondrial [Prunus mume])

HSP 1 Score: 344.7 bits (883), Expect = 1.8e-91
Identity = 215/343 (62.68%), Postives = 259/343 (75.51%), Query Frame = 1


Query: 1   MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHS---TICCINSSKFSLRPRSI 60
           MA VLRT    AT     ST+S +    KP  VSFR S S       ++S +FS  P S+
Sbjct: 1   MANVLRTSPLGATFAQLPSTLSPNSP--KPSYVSFRQSQSGSIPYLTLSSLRFSHLP-SL 60

Query: 61  RFPKLASFSSSGETEISEVEEEVRE-SEAEDSSVSYTGVEDAASD---SDINDDAEVNAE 120
           RF K    +S GETE +E  EEVR+  E EDSS     VED+ SD   S  ++D E +AE
Sbjct: 61  RFAKFVPLASQGETETTETVEEVRQPEEIEDSSDGAVSVEDSTSDDEESGTSNDDEGDAE 120

Query: 121 DVAQSVIISALQSYKQALADNNGAQIVEIESYLKSIEDDKFAVEKKLESLTEELSAEKVR 180
           +   S II++LQ YK+ALA N+ +++ EIES+LKSIED+K ++EKK+ SL+EELSAEKVR
Sbjct: 121 EKPVSAIIASLQLYKEALASNDESKVAEIESFLKSIEDEKISLEKKVASLSEELSAEKVR 180

Query: 181 ILRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQ 240
           ILRISADF+NFRKRT+RER+SLV NAQGEVVE+LL V+DNFERA+ QIKVETEGEEKIN 
Sbjct: 181 ILRISADFENFRKRTDRERISLVTNAQGEVVESLLPVVDNFERAKTQIKVETEGEEKINN 240

Query: 241 SYQSIYKQFNEILGSLGVVPVETIGKHFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLG 300
           SYQSIYKQF EIL SLGVVPVET+GK FDPLLHEAIMREDSTEFEEG+I+DEFRKGF LG
Sbjct: 241 SYQSIYKQFGEILSSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGVIIDEFRKGFKLG 300

Query: 301 ERLLRPSMVKVSAGPGPEKSD-EAAASEEHDSSENSEGSESES 336
           +RLLRPSMVKVSAGPGP K + +   SEE D+SE ++   +E+
Sbjct: 301 DRLLRPSMVKVSAGPGPAKPEQQVPPSEEQDASETTQEGSTET 340

[Close]

BLAST of CmaCh03G001690 vs. NCBI nr
Match: gi|595805720|ref|XP_007202333.1| (hypothetical protein PRUPE_ppa008162mg [Prunus persica])

HSP 1 Score: 341.3 bits (874), Expect = 2.0e-90
Identity = 219/346 (63.29%), Postives = 261/346 (75.43%), Query Frame = 1


Query: 1   MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHS---TICCINSSKFSLRPRSI 60
           MA VLRT    AT     ST+S +    KP  VSFR S S       ++S +F   P S+
Sbjct: 1   MANVLRTSPLGATFAQLPSTLSPNSP--KPSYVSFRQSQSGSIPYLTLSSLRFPHLP-SL 60

Query: 61  RFPKLASFSSSGETEISEVEEEVRE-SEAEDSSVSYTGVEDAASD---SDINDDAEVNAE 120
           RF K    +S GETE +E  EEVR+  E EDSS     VED+ SD   S  ++D E +AE
Sbjct: 61  RFAKFVPLASQGETETTETVEEVRQPEEIEDSSDGAVSVEDSTSDGEESGTSNDDEGDAE 120

Query: 121 DVAQSVIISALQSYKQALADNNGAQIVEIESYLKSIEDDKFAVEKKLESLTEELSAEKVR 180
           +   S II++LQ YK+ALA N+ +++ EIES+LK IED+K ++EKK+ SL+EELSAEKVR
Sbjct: 121 EKPVSAIIASLQLYKEALASNDESKVAEIESFLKYIEDEKISLEKKVASLSEELSAEKVR 180

Query: 181 ILRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQ 240
           ILRISADF+NFRKRT+RER+SLV NAQGEVVE+LL V+DNFERA+ QIKVETEGEEKIN 
Sbjct: 181 ILRISADFENFRKRTDRERISLVTNAQGEVVESLLPVVDNFERAKTQIKVETEGEEKINN 240

Query: 241 SYQSIYKQFNEILGSLGVVPVETIGKHFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLG 300
           SYQSIYKQF EIL SLGVVPVET+GK FDPLLHEAIMREDSTEFEEG+I+DEFRKGF LG
Sbjct: 241 SYQSIYKQFGEILSSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGVIIDEFRKGFKLG 300

Query: 301 ERLLRPSMVKVSAGPGPEKSD-EAAASEEHDSSENS-EGS-ESESS 337
           +RLLRPSMVKVSAGPGP K D +   SEE D+SE + EGS E+ES+
Sbjct: 301 DRLLRPSMVKVSAGPGPAKPDQQVPPSEEQDASETTKEGSTETESA 343

[Close]

BLAST of CmaCh03G001690 vs. NCBI nr
Match: gi|802585296|ref|XP_012070349.1| (PREDICTED: grpE protein homolog, mitochondrial [Jatropha curcas])

HSP 1 Score: 334.3 bits (856), Expect = 2.4e-88
Identity = 207/344 (60.17%), Postives = 260/344 (75.58%), Query Frame = 1


Query: 1   MATVLRTPFFQATPPATVSTISSSKSTLK---PLSVSFR-----TSHSTICCINSSKFSL 60
           MATVL+TP  +A  P  + T +++  +L+   P  +SFR     T  S   C+   +F +
Sbjct: 1   MATVLKTPPLRAQVPPRLITTATNNLSLQSPNPFCLSFRRRSISTEVSRTSCL---RFPV 60

Query: 61  RPRSIRFPKLASFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASD-SDINDDAEVN 120
           +  S RF K   F++ GETE +E EE ++E E +DSS    GVE +A +  D +   E +
Sbjct: 61  KS-SHRFIKFVPFATQGETETTETEETIQEPEIQDSSDGAVGVEGSADELEDSSSSEEAD 120

Query: 121 AEDVAQSVIISALQSYKQALADNNGAQIVEIESYLKSIEDDKFAVEKKLESLTEELSAEK 180
               A SVI+++LQSYK+ALA N+ ++IVEIE++LKS+ED+K  +E+K+ SL+++LS EK
Sbjct: 121 DTKEAPSVILASLQSYKEALASNDESKIVEIEAFLKSVEDEKINLEQKVVSLSQDLSTEK 180

Query: 181 VRILRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKI 240
            RILRISADFDNFRKRTERERLSL+ NAQGEVVE+LL VLDNFERA++QIK+ETEGEEKI
Sbjct: 181 DRILRISADFDNFRKRTERERLSLLTNAQGEVVESLLPVLDNFERAKSQIKLETEGEEKI 240

Query: 241 NQSYQSIYKQFNEILGSLGVVPVETIGKHFDPLLHEAIMREDSTEFEEGIILDEFRKGFL 300
           N SYQSIYKQF EILGSLGVVPVETIGK FDPLL EAIMREDSTEFEEGIILDEFRKGF 
Sbjct: 241 NNSYQSIYKQFVEILGSLGVVPVETIGKPFDPLLQEAIMREDSTEFEEGIILDEFRKGFK 300

Query: 301 LGERLLRPSMVKVSAGPGPEKSDEAAA-SEEHDSSENSEGSESE 335
           LG+RLLRP+MVKVSAGPGP K++EA +  E   +SE +E S +E
Sbjct: 301 LGDRLLRPAMVKVSAGPGPAKAEEAGSPGEAETASETNEESAAE 340

The following BLAST results are available for this feature:

BLAST of CmaCh03G001690 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GRPE_SYNS9	7.1e-32	42.86	Protein GrpE OS=Synechococcus sp. (strain CC9902) GN=grpE PE=3 SV=1	[more]
GRPE_SYNPX	9.2e-32	41.76	Protein GrpE OS=Synechococcus sp. (strain WH8102) GN=grpE PE=3 SV=1	[more]
GRPE_CYAP7	1.2e-31	42.77	Protein GrpE OS=Cyanothece sp. (strain PCC 7424) GN=grpE PE=3 SV=1	[more]
GRPE_THEEB	1.6e-31	43.02	Protein GrpE OS=Thermosynechococcus elongatus (strain BP-1) GN=grpE PE=3 SV=1	[more]
GRPE_SYNY3	2.1e-31	42.17	Protein GrpE OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=grpE PE=3 SV=1	[more]

BLAST of CmaCh03G001690 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L229_CUCSA	2.2e-141	85.12	GrpE protein homolog OS=Cucumis sativus GN=Csa_4G417510 PE=3 SV=1	[more]
M5VQG4_PRUPE	1.4e-90	63.29	GrpE protein homolog OS=Prunus persica GN=PRUPE_ppa008162mg PE=3 SV=1	[more]
A0A067L6A9_JATCU	1.7e-88	60.17	GrpE protein homolog OS=Jatropha curcas GN=JCGZ_02644 PE=3 SV=1	[more]
B9I664_POPTR	1.4e-87	59.53	GrpE protein homolog OS=Populus trichocarpa GN=POPTR_0013s06430g PE=3 SV=1	[more]
A0A067DUF0_CITSI	3.5e-86	59.14	GrpE protein homolog OS=Citrus sinensis GN=CISIN_1g019043mg PE=3 SV=1	[more]

BLAST of CmaCh03G001690 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17710.2	2.3e-81	56.18	Co-chaperone GrpE family protein	[more]
AT1G36390.1	7.7e-45	44.13	Co-chaperone GrpE family protein	[more]

BLAST of CmaCh03G001690 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449453123\|ref\|XP_004144308.1\|	3.2e-141	85.12	PREDICTED: grpE protein homolog, mitochondrial [Cucumis sativus]	[more]
gi\|659111503\|ref\|XP_008455767.1\|	1.2e-140	85.12	PREDICTED: grpE protein homolog, mitochondrial [Cucumis melo]	[more]
gi\|645270821\|ref\|XP_008240630.1\|	1.8e-91	62.68	PREDICTED: grpE protein homolog, mitochondrial [Prunus mume]	[more]
gi\|595805720\|ref\|XP_007202333.1\|	2.0e-90	63.29	hypothetical protein PRUPE_ppa008162mg [Prunus persica]	[more]
gi\|802585296\|ref\|XP_012070349.1\|	2.4e-88	60.17	PREDICTED: grpE protein homolog, mitochondrial [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000740	GrpE
IPR009012	GrpE_head
IPR013805	GrpE_coiled_coil

Vocabulary: **Molecular Function**
Term	Definition
GO:0000774	adenyl-nucleotide exchange factor activity
GO:0042803	protein homodimerization activity
GO:0051087	chaperone binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005759	mitochondrial matrix
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0000774	adenyl-nucleotide exchange factor activity
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0016853	isomerase activity
molecular_function	GO:0042803	protein homodimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G001690.1	CmaCh03G001690.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000740	GrpE nucleotide exchange factor	PRINTS	PR00773	GRPEPROTEIN	coord: 175..191 score: 1.9E-24coord: 258..273 score: 1.9E-24coord: 285..304 score: 1.9E-24coord: 203..218 score: 1.9
IPR000740	GrpE nucleotide exchange factor	HAMAP	MF_01151	GrpE	coord: 77..306 score: 17
IPR000740	GrpE nucleotide exchange factor	PANTHER	PTHR21237	GRPE PROTEIN	coord: 2..90 score: 1.5E-140coord: 132..309 score: 1.5E
IPR000740	GrpE nucleotide exchange factor	PFAM	PF01025	GrpE	coord: 150..305 score: 5.6
IPR000740	GrpE nucleotide exchange factor	PROSITE	PS01071	GRPE	coord: 261..304 scor
IPR009012	GrpE nucleotide exchange factor, head	GENE3D	G3DSA:2.30.22.10		coord: 250..308 score: 1.3
IPR009012	GrpE nucleotide exchange factor, head	unknown	SSF51064	Head domain of nucleotide exchange factor GrpE	coord: 252..307 score: 2.88
IPR013805	GrpE nucleotide exchange factor, coiled-coil	GENE3D	G3DSA:3.90.20.20		coord: 153..247 score: 3.2
None	No IPR available	unknown	Coil	Coil	coord: 146..166 score: -coord: 66..86 scor
None	No IPR available	PANTHER	PTHR21237:SF27	GRPE PROTEIN HOMOLOG	coord: 2..90 score: 1.5E-140coord: 132..309 score: 1.5E
None	No IPR available	unknown	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE	coord: 156..250 score: 4.58

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh03G001690	Cla012065	Watermelon (97103) v1	cmawmB634
CmaCh03G001690	Csa4G417510	Cucumber (Chinese Long) v2	cmacuB669
CmaCh03G001690	MELO3C019156	Melon (DHL92) v3.5.1	cmameB612
CmaCh03G001690	ClCG04G006040	Watermelon (Charleston Gray)	cmawcgB587
CmaCh03G001690	CSPI04G18710	Wild cucumber (PI 183967)	cmacpiB678
CmaCh03G001690	CmoCh03G001980	Cucurbita moschata (Rifu)	cmacmoB653
CmaCh03G001690	CmoCh07G011670	Cucurbita moschata (Rifu)	cmacmoB668
CmaCh03G001690	Lsi01G017400	Bottle gourd (USVL1VR-Ls)	cmalsiB601
CmaCh03G001690	Cp4.1LG10g10790	Cucurbita pepo (Zucchini)	cmacpeB656
CmaCh03G001690	Cp4.1LG19g02320	Cucurbita pepo (Zucchini)	cmacpeB672
CmaCh03G001690	MELO3C019156.2	Melon (DHL92) v3.6.1	cmamedB697
CmaCh03G001690	CsaV3_4G029080	Cucumber (Chinese Long) v3	cmacucB0798
CmaCh03G001690	Cla97C04G072600	Watermelon (97103) v2	cmawmbB686
CmaCh03G001690	Bhi03G002091	Wax gourd	cmawgoB0793
CmaCh03G001690	CsGy4G017780	Cucumber (Gy14) v2	cgybcmaB534
CmaCh03G001690	Carg26123	Silver-seed gourd	carcmaB1334
CmaCh03G001690	Carg13330	Silver-seed gourd	carcmaB0812

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh03G001690	CmaCh07G011170	Cucurbita maxima (Rimu)	cmacmaB524

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh03G001690	Cucumber (Chinese Long) v3	cmacucB0791
CmaCh03G001690	Watermelon (97103) v2	cmawmbB674
CmaCh03G001690	Cucurbita maxima (Rimu)	cmacmaB271
CmaCh03G001690	Cucumber (Gy14) v1	cgycmaB0938
CmaCh03G001690	Cucurbita moschata (Rifu)	cmacmoB641
CmaCh03G001690	Wild cucumber (PI 183967)	cmacpiB670
CmaCh03G001690	Cucumber (Chinese Long) v2	cmacuB662
CmaCh03G001690	Melon (DHL92) v3.5.1	cmameB602
CmaCh03G001690	Watermelon (Charleston Gray)	cmawcgB573
CmaCh03G001690	Watermelon (97103) v1	cmawmB614
CmaCh03G001690	Bottle gourd (USVL1VR-Ls)	cmalsiB611
CmaCh03G001690	Cucumber (Gy14) v2	cgybcmaB409
CmaCh03G001690	Melon (DHL92) v3.6.1	cmamedB686