CmoCh07G011670 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh07G011670
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	(Co-chaperone CGE1 isoform b) (GrpE nucleotide release factor) (Precursor)
Location	Cmo_Chr07 : 6258828 .. 6262744 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACTTCCCACTCTCCTCTCCTCTGCACCCTTATCTCTCTTCCTTTCTCTCTCGCTCTGTGATTTATCTCATGGCCACGATTCTCAGAGCTCCATTTTTTCAGGCAACTCCTCCGGCAAATGTATCCACCATCTTCTCTTCCAAATCCACCCTAAAGTCCTCATCTCTTTCCTTCAGAACTTCTCACTCTCCCTTTTATTGCATCAATTCCTCCAAGCTTTCTCGTCCTCGTTCTATCCGGTTCCCGAAGCTTGGCCCGTTTGCTTCCTCTGGAAATACGGAAGTTAGCGAGGTCGAAGAGGAAGTTCACGAATCTGAGGCTGAGGTACTTTAATTCTTTGGTTTCTTTCTCGAGCTAATGTAGTTTGATTCTTTAGTTTGTTAGGTTTGATAGTGTTCGAGGAGATTTAATGTTAGTTTTGGTGCTTGGATTGAATTAGAAGCTGGATGTTGTTTTTTTGCAGAGATGTTAATACAATCGCGTTGTTGTATCTAATAATATCGATTGGAATGAATTTGCCAAGTTTTGTGAGAGGGAATACGGAATTTTGGCACTATCTTTTGCTCATTGTGTATTTCTGGATTCTAATTGTTCTAGTGGATTGTATGTAGACATTCAGAGTCGGATGTTCTAGAGAGCTTTAGACCTTCTCAAAACTTACCTTGAAATTATCCACTTAACATTTGAAATTTTAGTGGAAACTAAAAAGTTGAGAGTATGGTAACAGTTTTGGTTGTTTTCCATTATTCGGAGTTTGGTTAAATTATTCTTTGCTGCTTTACTTGTCATTGATTTTGGTTCTTATTGACACCTCTCGGGCATATCTTTTAGTAAGTTTGTTTGAAGTAAATACTGCAACGGCCCAAGCCCACCGCTAATTGATATTGTCTTCTTTGGACTTTTCCTTTTGGGCTTACCGTCAAGGTTTTTAAAATGTGTATGCTAGAGAGAAGTTTTTACACCTTTATAAAAAATGTTTCGTTCTCCTCCCCAACCAACGTGGGATCTCACAATCTATCTTTTTCGAGGCTCATCATCTTCGTTGGCACTCGTTTCCTTCTCCAATCGATGTGGGACCTCCCCTTCGGGGCCCAGCATCCTTGTTGGCACATCGCCTCGTGTCCAACCTTCTTGCTGGCACATCGCCTGGTGTCTGCTACCATTTGTAACGGTTCAAGCCCACCGCTGACAGATATTGTCCTCTTTGGACTTTCCTTTCGGGGTTCCCCTCAAGGTTCTTAAAACGCGTTTGATAGGGAGAGGTTTTTACACCCTTATAAAGAACGTTTCGTTCTCCTCCCTAACCGACGTGGGATTTCACAAATACCATACTCGTCTCTTGATGAAGGTTTGGTTTCTTTATAACGAAACATGACCCATAAACTATAGTGTTTTAGACCTACAAGTTTCAAGTTTAAATTATTGATTTGATTTTTTAAAATTTGAAGATTTTTGATATTGCATGCTTAGGAAGTGTAATAACTTCTGACAATGAAAAATAGTTTCTCACGGCATGGATTTAGATTGTTTTAATTAAGTTTATGCATAAATCATGCCTTGCATTTTCTTGTTGCTCATATATTTATGTAACAGGACTCTTCTGTTAGTTATACTGGTGTGGAAGACGCTGCAAGTGATAGTGACATAAATGATGGTGCAGAAGTTAATGCTGAGGATTCACCTCAATCAGTCATCCTAGCAGCACTTCAATCTTATAAGCAGGCTTTAGCTGATAACAATGAATCTCAAATAGCTGAAATAGAATCTTTTCTGAAATCAATTGAAGATGAAAAGCTTGCAGCCGAAAGGAAATTGAAATCCTTAACTGAAGACCTTTCTGTAGAGAAGGATCGAATTTTGAGGATCAGTGCTGACTTCGAAAATTTTCGGAAGAGAACAGAGAGGGAACGTCTTTCCTTGGTAAAAAATGCCCAAGGGGAAGTAGTAGAGACTTTATTGGGTGTGCTGGATAATTTTGAGAGAGCCAGGGCACAGATCAAGGTGGAGACAGAGGGAGAAGAGAAGATAAATCAAAGTTACCAGAGCATTTATAAGCAGTTCAACGAGATTTTGGGCTCATTGGGTGTAGTTCCTGTCGAGACAGTTGGAAAACCTTTTGATCCACTGGTGAGTTTTTGCTTCCAGTCCACTTATTAAAATTTCAAAATCTCATCTGCCTGCCTTTATTCATCAAGTAAAGTCACTATTAATCAGTATGTGACTTCTAATATCTTTTAGTTAAAAAATGACCATCCTTTTTCGCTATCAAATTGTTTAAATTGTTCAGGTTCTTAGAGTATCTGACATGGTGGAGTAAAATGGTTGTATAGATTTAATGCCATTTATTTCAGTGAGATTGGTGATCAAACTCTGGAAACTAGTGGAGCTATAGGACCTTTCCTTGCAAATCTAATGATCATAACTTGATGAACTTCCTCTGGTTAGTGTTAGGAATTACGGATCTCCACAATAGTATGATCTTGTCCATTTTGAGCATAAGCTCTCGTGGCTTTGCTTTGGGTTTCTCCAAAAGGCCTCAGACCAATGGAGATGTATTCCTTACTTATAAGCCCATGATCATTCTCTAAATTGGCCAATGTGGGACTCCTTCCCAATAATCCTCCCGTCTGTTTTTTTGATGAATGTCAAACGTGGATATAGTTTTAAGGCATCACCCTTGAGGATACATGTATTCGTGTAGATTTTGACCCTATGAAAACTATGATTGTGACTTTTTGCCTATGTGAAAGCCAACTCATTTTGGTTGCCCTCACTAAGAACTGTGATCTTTTTTGCATTATAATGTGAGAGAGTAAATCATATTTTCCTTGATAATAGTGCCTTTTGCAAAACATATTTTGGTTGCCCTCACAAGGCTATTATTTCTATTTCTATGTTTCTGTGTAATTTTGGATTATCTTCAAACCATTGAATTCTGAGCTGATATGTTTGTTTTTCTTTTTTGATTTATTGTTAATATGCATTCTAAACTGCATGACATGATCGACCATGGAATTAATCAGGGATCTGCTGTTTAATCTCTCCTCTCCTTTTGGGGACCAAGTTTGGTTAATTGAAACTTCTTTAATCAATTTCTTCTTACAGCTTCATGAAGCAATTATGAGGGAGGATTCCACAGAGTTTGAGGAAGGTATCATACTCGACGAGTTTCGTAAAGGATTCTTGCTCGGTGACAGACTCTTGCGTCCATCCATGGTGAAAGTATCGGCTGGTCCCGGACCCGAAAAGCCAGCCGAAGCAGCAGCACCATCAGAAGAACATGATTCAAGTGAGAATTATGAAAGATCCAATACGGAGTCATCTTAAAACGTAATTCCTCTACACCACCATCCAATTTTGAGTATAGTAAGAATCTTGTTTGTGCCTGATAAGAGACTGGAGATGAATTGAATCAGGCTTTTGCAGGCAGAGAGTTTTGATAATTTTGATGTCAGTGGAAATGTTGTAGTTTGATTTAGACATATTAATTCTCTCTCTAAAAACCCTGTTGTTCTAACATGTTGAGAGAGAATTTAGCAAAGGCTCTATTGTAAGTTTGTAGAATTGGTTGAATGTGGCTCCATTTGTGAGGCCAGAAAATGGCATGGTAGTCCACTCTTCATGAAGCTTCCTACTTTGTGTTTCATTTTCAAGCATTTTCCAGAACTAAAACAACTCTATTTTCAGAGCTTCTTATCAGGGGAAAGGTAGTCGCGGGTCGGGTCGGTTCAACGGATGCGGGTAGCGGTTCAGGTCAGACACAAGCATTCGGGTTAGGTCGGATCAGACAATGTGTGTCCCCACTCGGTGCCTGACGCCTTGCTCCTCTCTACGTGTGACATTTGTCCACCACACAACCAGTCGTGCTCTCCGCCTCGTAGTTCGACGAGTGTCTCTTCTTTCCTGTCTGTCTCCCT

mRNA sequence

CACTTCCCACTCTCCTCTCCTCTGCACCCTTATCTCTCTTCCTTTCTCTCTCGCTCTGTGATTTATCTCATGGCCACGATTCTCAGAGCTCCATTTTTTCAGGCAACTCCTCCGGCAAATGTATCCACCATCTTCTCTTCCAAATCCACCCTAAAGTCCTCATCTCTTTCCTTCAGAACTTCTCACTCTCCCTTTTATTGCATCAATTCCTCCAAGCTTTCTCGTCCTCGTTCTATCCGGTTCCCGAAGCTTGGCCCGTTTGCTTCCTCTGGAAATACGGAAGTTAGCGAGGTCGAAGAGGAAGTTCACGAATCTGAGGCTGAGGACTCTTCTGTTAGTTATACTGGTGTGGAAGACGCTGCAAGTGATAGTGACATAAATGATGGTGCAGAAGTTAATGCTGAGGATTCACCTCAATCAGTCATCCTAGCAGCACTTCAATCTTATAAGCAGGCTTTAGCTGATAACAATGAATCTCAAATAGCTGAAATAGAATCTTTTCTGAAATCAATTGAAGATGAAAAGCTTGCAGCCGAAAGGAAATTGAAATCCTTAACTGAAGACCTTTCTGTAGAGAAGGATCGAATTTTGAGGATCAGTGCTGACTTCGAAAATTTTCGGAAGAGAACAGAGAGGGAACGTCTTTCCTTGGTAAAAAATGCCCAAGGGGAAGTAGTAGAGACTTTATTGGGTGTGCTGGATAATTTTGAGAGAGCCAGGGCACAGATCAAGGTGGAGACAGAGGGAGAAGAGAAGATAAATCAAAGTTACCAGAGCATTTATAAGCAGTTCAACGAGATTTTGGGCTCATTGGGTGTAGTTCCTGTCGAGACAGTTGGAAAACCTTTTGATCCACTGCTTCATGAAGCAATTATGAGGGAGGATTCCACAGAGTTTGAGGAAGGTATCATACTCGACGAGTTTCGTAAAGGATTCTTGCTCGGTGACAGACTCTTGCGTCCATCCATGGTGAAAGTATCGGCTGGTCCCGGACCCGAAAAGCCAGCCGAAGCAGCAGCACCATCAGAAGAACATGATTCAAGTGAGAATTATGAAAGATCCAATACGGAGTCATCTTAAAACGTAATTCCTCTACACCACCATCCAATTTTGAGTATAGTAAGAATCTTGTTTGTGCCTGATAAGAGACTGGAGATGAATTGAATCAGGCTTTTGCAGGCAGAGAGTTTTGATAATTTTGATGTCAGTGGAAATGTTGTAGTTTGATTTAGACATATTAATTCTCTCTCTAAAAACCCTGTTGTTCTAACATGTTGAGAGAGAATTTAGCAAAGGCTCTATTGTAAGTTTGTAGAATTGGTTGAATGTGGCTCCATTTGTGAGGCCAGAAAATGGCATGAGCTTCTTATCAGGGGAAAGGTAGTCGCGGGTCGGGTCGGTTCAACGGATGCGGGTAGCGGTTCAGGTCAGACACAAGCATTCGGGTTAGGTCGGATCAGACAATGTGTGTCCCCACTCGGTGCCTGACGCCTTGCTCCTCTCTACGTGTGACATTTGTCCACCACACAACCAGTCGTGCTCTCCGCCTCGTAGTTCGACGAGTGTCTCTTCTTTCCTGTCTGTCTCCCT

Coding sequence (CDS)

ATGGCCACGATTCTCAGAGCTCCATTTTTTCAGGCAACTCCTCCGGCAAATGTATCCACCATCTTCTCTTCCAAATCCACCCTAAAGTCCTCATCTCTTTCCTTCAGAACTTCTCACTCTCCCTTTTATTGCATCAATTCCTCCAAGCTTTCTCGTCCTCGTTCTATCCGGTTCCCGAAGCTTGGCCCGTTTGCTTCCTCTGGAAATACGGAAGTTAGCGAGGTCGAAGAGGAAGTTCACGAATCTGAGGCTGAGGACTCTTCTGTTAGTTATACTGGTGTGGAAGACGCTGCAAGTGATAGTGACATAAATGATGGTGCAGAAGTTAATGCTGAGGATTCACCTCAATCAGTCATCCTAGCAGCACTTCAATCTTATAAGCAGGCTTTAGCTGATAACAATGAATCTCAAATAGCTGAAATAGAATCTTTTCTGAAATCAATTGAAGATGAAAAGCTTGCAGCCGAAAGGAAATTGAAATCCTTAACTGAAGACCTTTCTGTAGAGAAGGATCGAATTTTGAGGATCAGTGCTGACTTCGAAAATTTTCGGAAGAGAACAGAGAGGGAACGTCTTTCCTTGGTAAAAAATGCCCAAGGGGAAGTAGTAGAGACTTTATTGGGTGTGCTGGATAATTTTGAGAGAGCCAGGGCACAGATCAAGGTGGAGACAGAGGGAGAAGAGAAGATAAATCAAAGTTACCAGAGCATTTATAAGCAGTTCAACGAGATTTTGGGCTCATTGGGTGTAGTTCCTGTCGAGACAGTTGGAAAACCTTTTGATCCACTGCTTCATGAAGCAATTATGAGGGAGGATTCCACAGAGTTTGAGGAAGGTATCATACTCGACGAGTTTCGTAAAGGATTCTTGCTCGGTGACAGACTCTTGCGTCCATCCATGGTGAAAGTATCGGCTGGTCCCGGACCCGAAAAGCCAGCCGAAGCAGCAGCACCATCAGAAGAACATGATTCAAGTGAGAATTATGAAAGATCCAATACGGAGTCATCTTAA

Homology

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BLAST of CmoCh07G011670 vs. Swiss-Prot
Match: GRPE_THEEB (Protein GrpE OS=Thermosynechococcus elongatus (strain BP-1) GN=grpE PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 5.8e-34
Identity = 80/174 (45.98%), Postives = 117/174 (67.24%), Query Frame = 1


Query: 135 ESQIAEIESFLKSIEDEKLAAERKLK-SLTEDLSVEKDRILRISADFENFRKRTERERLS 194
           E Q +E  S   +   E++AA    K SL++ +     + +R++ADFENFRKRT+RE+  
Sbjct: 62  EDQASEATSANAADLLEQIAALEAAKASLSQVVEERNSQYIRLAADFENFRKRTQREKEE 121

Query: 195 LVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQFNEILGSLGVVPV 254
           L    +  V+  LL V+D+FE AR  I+ ETE EEKI++SYQ +YKQ  E L  +GV  +
Sbjct: 122 LELQIKCSVIADLLPVVDSFELARTHIQTETEAEEKIHRSYQGVYKQLVECLKRIGVSAM 181

Query: 255 ETVGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPSMVKVSAGP 308
           +  GKPFDP LHEA++RE + E  EG +++E ++G++LGDR+LR +MVKV+A P
Sbjct: 182 QAKGKPFDPNLHEAVLREATNEHPEGTVIEELKRGYMLGDRVLRHAMVKVAAPP 235

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BLAST of CmoCh07G011670 vs. Swiss-Prot
Match: GRPE_SYNPX (Protein GrpE OS=Synechococcus sp. (strain WH8102) GN=grpE PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.4e-32
Identity = 71/169 (42.01%), Postives = 114/169 (67.46%), Query Frame = 1


Query: 156 ERKLKSLTEDLSVEKDRILRISADFENFRKRTERERLSLVKNAQGEVVETLLGVLDNFER 215
           E +L++L ++    + + +RI+ADF+NFRKR  R++  + +      +  +L V+DNFER
Sbjct: 50  EHELQTLKQEHETLQSQYMRIAADFDNFRKRQSRDQEDIRQQLVCSTLSEILPVVDNFER 109

Query: 216 ARAQIKVETEGEEKINQSYQSIYKQFNEILGSLGVVPVETVGKPFDPLLHEAIMREDSTE 275
           AR Q+  E+E  + +++SYQ +YKQ  ++L   GV  +E VG+ FDP LHEA++RE+STE
Sbjct: 110 ARQQLNPESEEAQALHRSYQGLYKQLVDVLKQQGVARMEVVGQLFDPTLHEAVLREESTE 169

Query: 276 FEEGIILDEFRKGFLLGDRLLRPSMVKVSAGPGPEKPAEAAAPSEEHDS 325
             E ++++E ++G+ L  ++LR ++VKVS GPGP   AE AA +E  DS
Sbjct: 170 QPEDVVIEELQRGYHLNGKVLRHALVKVSMGPGPSADAEGAASAEAEDS 218

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BLAST of CmoCh07G011670 vs. Swiss-Prot
Match: GRPE_SYNE7 (Protein GrpE OS=Synechococcus elongatus (strain PCC 7942) GN=grpE PE=3 SV=2)

HSP 1 Score: 140.6 bits (353), Expect = 3.2e-32
Identity = 72/152 (47.37%), Postives = 107/152 (70.39%), Query Frame = 1


Query: 153 LAAERKLKSLTEDLSVEKDRILRISADFENFRKRTERERLSLVKNAQGEVVETLLGVLDN 212
           +AA+R    L  +L  +    LR++ADFENFR+RT +ER  L   ++   +  LL V+DN
Sbjct: 46  VAADRD--RLKTELDEQNSAYLRLAADFENFRRRTLKEREELELQSKRTTITELLPVIDN 105

Query: 213 FERARAQIKVETEGEEKINQSYQSIYKQFNEILGSLGVVPVETVGKPFDPLLHEAIMRED 272
           F+RARAQIK + E  E I++SYQ +YKQ  + L  +GV P+   G+PFDP LH+A++RE+
Sbjct: 106 FDRARAQIKPQGEEAEAIHKSYQGLYKQLVDCLKRIGVSPMRAEGQPFDPSLHDAVLREE 165

Query: 273 STEFEEGIILDEFRKGFLLGDRLLRPSMVKVS 305
           +TE  +GI+L+E ++G+LLGD +LR ++VKVS
Sbjct: 166 TTEHPDGIVLEELQRGYLLGDLVLRHALVKVS 195

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BLAST of CmoCh07G011670 vs. Swiss-Prot
Match: GRPE_NOSS1 (Protein GrpE OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=grpE PE=3 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.1e-32
Identity = 76/169 (44.97%), Postives = 110/169 (65.09%), Query Frame = 1


Query: 157 RKLKSLTEDLSVEKDRILRISADFENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERA 216
           +++ SL   L     + +RI+ADFEN+RKRT++E+  L    +   +  LL ++DNFERA
Sbjct: 82  QQISSLKTQLDERSTQYMRIAADFENYRKRTQKEKEELDLQVKRNTILELLPIVDNFERA 141

Query: 217 RAQIKVETEGEEKINQSYQSIYKQFNEILGSLGVVPVETVGKPFDPLLHEAIMREDSTEF 276
           R+ +K +TE E  I++SYQ +YKQ  + L  LGV P+   G+ FDP LHEA+MRE + E 
Sbjct: 142 RSHLKPQTESEMTIHKSYQGVYKQLVDSLKRLGVSPMRPEGQEFDPNLHEAVMREPTDEH 201

Query: 277 EEGIILDEFRKGFLLGDRLLRPSMVKVSAGPGPEKPAEAAAPSEEHDSS 326
            EG +L+E  +G+ LGDR+LR SMVKV+A      P E   P++E+ SS
Sbjct: 202 PEGTVLEELVRGYYLGDRVLRHSMVKVAA------PKEDTLPAQENQSS 244

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BLAST of CmoCh07G011670 vs. Swiss-Prot
Match: GRPE_ANAVT (Protein GrpE OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=grpE PE=3 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.1e-32
Identity = 76/169 (44.97%), Postives = 110/169 (65.09%), Query Frame = 1


Query: 157 RKLKSLTEDLSVEKDRILRISADFENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERA 216
           +++ SL   L     + +RI+ADFEN+RKRT++E+  L    +   +  LL ++DNFERA
Sbjct: 82  QQINSLKTQLDERSTQYMRIAADFENYRKRTQKEKEELDLQVKRNTILELLPIVDNFERA 141

Query: 217 RAQIKVETEGEEKINQSYQSIYKQFNEILGSLGVVPVETVGKPFDPLLHEAIMREDSTEF 276
           R+ +K +TE E  I++SYQ +YKQ  + L  LGV P+   G+ FDP LHEA+MRE + E 
Sbjct: 142 RSHLKPQTESEMTIHKSYQGVYKQLVDSLKRLGVSPMRPEGQEFDPNLHEAVMREPTDEH 201

Query: 277 EEGIILDEFRKGFLLGDRLLRPSMVKVSAGPGPEKPAEAAAPSEEHDSS 326
            EG +L+E  +G+ LGDR+LR SMVKV+A      P E   P++E+ SS
Sbjct: 202 PEGTVLEELVRGYYLGDRVLRHSMVKVAA------PKEDTLPAQENQSS 244

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BLAST of CmoCh07G011670 vs. TrEMBL
Match: A0A0A0L229_CUCSA (GrpE protein homolog OS=Cucumis sativus GN=Csa_4G417510 PE=3 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 3.3e-137
Identity = 278/337 (82.49%), Postives = 301/337 (89.32%), Query Frame = 1


Query: 1   MATILRAPFFQATPPANVSTIFSSKSTLKSSSLSFRTSHSPFYCINSSKLS-RPRSIRFP 60
           MAT+LR PFFQATPPA+VS    SKSTLK SSLSF TSHS   C NSSK S RP S+RFP
Sbjct: 1   MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP 60

Query: 61  KLGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSVI 120
           K  PFASSG TE+SE+EEEV +SEAEDSSVSYTGVEDA SD+DI+D +EVN EDS QSVI
Sbjct: 61  KR-PFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVI 120

Query: 121 LAALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRISAD 180
           +AALQSYKQALADN+ +Q+ EIESFLKSIEDEKLA ERKL SL E+LSVEKDR+LRISAD
Sbjct: 121 IAALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISAD 180

Query: 181 FENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240
           F+NFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK
Sbjct: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240

Query: 241 QFNEILGSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPS 300
           QF EILGSLGVVPVET+GKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPS
Sbjct: 241 QFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPS 300

Query: 301 MVKVSAGPGPEKPAEAAAPSEEHDSSENYERSNTESS 337
           MVKVSAGPGPEK ++  AP+E+ DSSE +  S +ESS
Sbjct: 301 MVKVSAGPGPEK-SDETAPAEKLDSSEEFANSESESS 335

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BLAST of CmoCh07G011670 vs. TrEMBL
Match: M5VQG4_PRUPE (GrpE protein homolog OS=Prunus persica GN=PRUPE_ppa008162mg PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 1.5e-97
Identity = 217/342 (63.45%), Postives = 258/342 (75.44%), Query Frame = 1


Query: 1   MATILRAPFFQATPPANVSTIFSSKSTLKSSSLSFRTSHS---PFYCINSSKLSRPRSIR 60
           MA +LR     AT     ST+  S ++ K S +SFR S S   P+  ++S +     S+R
Sbjct: 1   MANVLRTSPLGATFAQLPSTL--SPNSPKPSYVSFRQSQSGSIPYLTLSSLRFPHLPSLR 60

Query: 61  FPKLGPFASSGNTEVSEVEEEVHE-SEAEDSSVSYTGVEDAASD---SDINDGAEVNAED 120
           F K  P AS G TE +E  EEV +  E EDSS     VED+ SD   S  ++  E +AE+
Sbjct: 61  FAKFVPLASQGETETTETVEEVRQPEEIEDSSDGAVSVEDSTSDGEESGTSNDDEGDAEE 120

Query: 121 SPQSVILAALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRI 180
            P S I+A+LQ YK+ALA N+ES++AEIESFLK IEDEK++ E+K+ SL+E+LS EK RI
Sbjct: 121 KPVSAIIASLQLYKEALASNDESKVAEIESFLKYIEDEKISLEKKVASLSEELSAEKVRI 180

Query: 181 LRISADFENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQS 240
           LRISADFENFRKRT+RER+SLV NAQGEVVE+LL V+DNFERA+ QIKVETEGEEKIN S
Sbjct: 181 LRISADFENFRKRTDRERISLVTNAQGEVVESLLPVVDNFERAKTQIKVETEGEEKINNS 240

Query: 241 YQSIYKQFNEILGSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGD 300
           YQSIYKQF EIL SLGVVPVETVGKPFDPLLHEAIMREDSTEFEEG+I+DEFRKGF LGD
Sbjct: 241 YQSIYKQFGEILSSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGVIIDEFRKGFKLGD 300

Query: 301 RLLRPSMVKVSAGPGPEKPAEAAAPSEEHDSSENYERSNTES 336
           RLLRPSMVKVSAGPGP KP +   PSEE D+SE  +  +TE+
Sbjct: 301 RLLRPSMVKVSAGPGPAKPDQQVPPSEEQDASETTKEGSTET 340

[Close]

BLAST of CmoCh07G011670 vs. TrEMBL
Match: A0A067L6A9_JATCU (GrpE protein homolog OS=Jatropha curcas GN=JCGZ_02644 PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 3.1e-95
Identity = 214/347 (61.67%), Postives = 260/347 (74.93%), Query Frame = 1


Query: 1   MATILRAPFFQATPPANVSTIFSSKSTLKSSS---LSFRTSHSPFYCINSSKLSRPRSIR 60
           MAT+L+ P  +A  P  + T  ++  +L+S +   LSFR          S+++SR   +R
Sbjct: 1   MATVLKTPPLRAQVPPRLITTATNNLSLQSPNPFCLSFRRRSI------STEVSRTSCLR 60

Query: 61  FP--------KLGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEV 120
           FP        K  PFA+ G TE +E EE + E E +DSS    GVE +A + + +  +E 
Sbjct: 61  FPVKSSHRFIKFVPFATQGETETTETEETIQEPEIQDSSDGAVGVEGSADELEDSSSSE- 120

Query: 121 NAEDSPQ--SVILAALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLS 180
            A+D+ +  SVILA+LQSYK+ALA N+ES+I EIE+FLKS+EDEK+  E+K+ SL++DLS
Sbjct: 121 EADDTKEAPSVILASLQSYKEALASNDESKIVEIEAFLKSVEDEKINLEQKVVSLSQDLS 180

Query: 181 VEKDRILRISADFENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGE 240
            EKDRILRISADF+NFRKRTERERLSL+ NAQGEVVE+LL VLDNFERA++QIK+ETEGE
Sbjct: 181 TEKDRILRISADFDNFRKRTERERLSLLTNAQGEVVESLLPVLDNFERAKSQIKLETEGE 240

Query: 241 EKINQSYQSIYKQFNEILGSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGIILDEFRK 300
           EKIN SYQSIYKQF EILGSLGVVPVET+GKPFDPLL EAIMREDSTEFEEGIILDEFRK
Sbjct: 241 EKINNSYQSIYKQFVEILGSLGVVPVETIGKPFDPLLQEAIMREDSTEFEEGIILDEFRK 300

Query: 301 GFLLGDRLLRPSMVKVSAGPGPEKPAEAAAPSEEHDSSENYERSNTE 335
           GF LGDRLLRP+MVKVSAGPGP K  EA +P E   +SE  E S  E
Sbjct: 301 GFKLGDRLLRPAMVKVSAGPGPAKAEEAGSPGEAETASETNEESAAE 340

[Close]

BLAST of CmoCh07G011670 vs. TrEMBL
Match: B9SY85_RICCO (GrpE protein homolog OS=Ricinus communis GN=RCOM_0845250 PE=3 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 1.5e-92
Identity = 208/351 (59.26%), Postives = 254/351 (72.36%), Query Frame = 1


Query: 1   MATILRAPFFQATPPANV--STIFSSKST------LKSSSLSFRTSHSPFYCINSSKLSR 60
           MAT+L+ P  +A  P  +  +  FS KS       ++  S+S   + +     NS +L+ 
Sbjct: 1   MATVLKTPPLRAPLPPRLMYTKNFSLKSPNPFRLPIRYKSISTTATTTKLTSTNSLQLAA 60

Query: 61  PRSIRFPKLGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASD--------SDIN 120
             S+RF KL PFAS G T+ ++ EE V E E +DSS     VED A +         +I 
Sbjct: 61  KSSLRFVKLVPFASEGETKTTQTEETVQEPEIQDSSDGAVEVEDGAGEVEGGVGEVEEIT 120

Query: 121 DGAEV-NAEDSPQSVILAALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLT 180
            G EV + E++  S+IL +L+SY++ALA N+E++IAEIE+FLKS+EDEK    RK+ SL 
Sbjct: 121 SGEEVADVEETTSSIILTSLRSYREALASNDEARIAEIEAFLKSVEDEKNDLGRKVASLI 180

Query: 181 EDLSVEKDRILRISADFENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVE 240
           E+LS EKDR+LRISADF+NFRKRT+RERLSLV NAQGEVVE LL VLDNFERA+AQIK+E
Sbjct: 181 EELSTEKDRVLRISADFDNFRKRTDRERLSLVSNAQGEVVENLLPVLDNFERAKAQIKLE 240

Query: 241 TEGEEKINQSYQSIYKQFNEILGSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGIILD 300
           TEGEEKIN SYQSIYKQF EILGSLGVVPVET+G PFDPLLHEAIMREDSTEFEEGIIL 
Sbjct: 241 TEGEEKINNSYQSIYKQFVEILGSLGVVPVETIGNPFDPLLHEAIMREDSTEFEEGIILQ 300

Query: 301 EFRKGFLLGDRLLRPSMVKVSAGPGPEKPAEAAAPSEEHDSSENYERSNTE 335
           EFRKGF LGDRLLRPSMVKVSAGPGP KP +A + +E   + E  +  + E
Sbjct: 301 EFRKGFKLGDRLLRPSMVKVSAGPGPAKPEQAESSAEVETAGETSQEGSPE 351

[Close]

BLAST of CmoCh07G011670 vs. TrEMBL
Match: B9I664_POPTR (GrpE protein homolog OS=Populus trichocarpa GN=POPTR_0013s06430g PE=3 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 2.1e-91
Identity = 203/338 (60.06%), Postives = 245/338 (72.49%), Query Frame = 1


Query: 1   MATILRAPFFQATPPANVSTIFSSKSTLKSSSLSFRTSHS-PFYCINSSKLSRPR--SIR 60
           MAT+++ P F A    N S+I    +     S S   + S P + +  + L  P   S+R
Sbjct: 1   MATVIKTPPFSAPRIINNSSISLKYANPLCLSFSHNNNRSIPNFSLAKNSLRFPTKPSLR 60

Query: 61  FPKLGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQS 120
           F K  PF+S G TE +E EE + E E EDSS     VEDAAS  ++    EV   +   S
Sbjct: 61  FVKFVPFSSQGETETTETEETIQEPEIEDSSDGAVEVEDAASSEEVASSEEVADAEDTSS 120

Query: 121 VILAALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRIS 180
           V++A+L+SYK+ALA N+ES IAEIE+FLKS+EDEK+  ERK+ SLTE+LS+EK+R+LRIS
Sbjct: 121 VVMASLRSYKEALASNDESIIAEIEAFLKSVEDEKIDNERKVASLTEELSIEKERVLRIS 180

Query: 181 ADFENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSI 240
           ADF+NFRKRTERERLSLV NAQGEVVE LL VLDNFERA+ QIK  TEGEEKIN SYQ+I
Sbjct: 181 ADFDNFRKRTERERLSLVTNAQGEVVENLLSVLDNFERAKTQIKTATEGEEKINNSYQNI 240

Query: 241 YKQFNEILGSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLR 300
           YKQF EIL SLGVVPVET+GKPFDP+LHEAIMREDS  FEEG +L+E+RKGF LGDRLLR
Sbjct: 241 YKQFMEILVSLGVVPVETIGKPFDPMLHEAIMREDSDAFEEGTVLEEYRKGFKLGDRLLR 300

Query: 301 PSMVKVSAGPGPEKPAEAAAPSEEHD-SSENYERSNTE 335
           PSMVKVSAGPGP KP +     EE + +S   E  +TE
Sbjct: 301 PSMVKVSAGPGPVKPEQVEESQEEAEATSGTSEGGSTE 338

[Close]

BLAST of CmoCh07G011670 vs. TAIR10
Match: AT5G17710.2 (AT5G17710.2 Co-chaperone GrpE family protein)

HSP 1 Score: 303.1 bits (775), Expect = 2.1e-82
Identity = 187/337 (55.49%), Postives = 232/337 (68.84%), Query Frame = 1


Query: 1   MATILRAPFFQATPPANVSTIFSSKSTLKSSSLSFRTSHSPFYCINSSKLSRPRSIRFP- 60
           MA +L+ P    TP    + + +     K   +SF    +    ++     R  S  +P 
Sbjct: 1   MAGLLKTPSLHLTP----TLLHAPSVPFKPFCVSFAGGRNVSVSLSRRASLRSVSSGYPL 60

Query: 61  ---KLGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQ 120
               L PFAS G  E +E E E +E E +++     G  D  +++   +  E  AE+   
Sbjct: 61  RLLNLVPFAS-GEAETTETEVESNEPEVQETD----GAVDVENENASAEEGE--AEEEEA 120

Query: 121 SVILAALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRI 180
           +VI A L+SYK+ALADNNE +IAEIE+ LKSIEDEK     K+ SL+ +LSVE+DR++RI
Sbjct: 121 AVITALLKSYKEALADNNEGKIAEIEASLKSIEDEKFLLADKVASLSNELSVERDRLIRI 180

Query: 181 SADFENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQS 240
           SADF+NFRKRTERERL+LV NAQGEVVE LL VLDNFERA++QIKVETEGEEK+  SYQS
Sbjct: 181 SADFDNFRKRTERERLNLVSNAQGEVVENLLAVLDNFERAKSQIKVETEGEEKVTNSYQS 240

Query: 241 IYKQFNEILGSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLL 300
           IYKQF EILGSLGV+ VETVGK FDP+LHEAIMREDS E+EEGI+L+E+RKGFLLG+RLL
Sbjct: 241 IYKQFVEILGSLGVIHVETVGKQFDPMLHEAIMREDSAEYEEGIVLEEYRKGFLLGERLL 300

Query: 301 RPSMVKVSAGPGPEKPAEAAAPSEEHDSSENYERSNT 334
           RPSMVKVSAGPGPEKP EA         S   E S++
Sbjct: 301 RPSMVKVSAGPGPEKPLEAEGEEATAQGSAEEESSSS 326

[Close]

BLAST of CmoCh07G011670 vs. TAIR10
Match: AT1G36390.1 (AT1G36390.1 Co-chaperone GrpE family protein)

HSP 1 Score: 184.9 bits (468), Expect = 8.3e-47
Identity = 98/213 (46.01%), Postives = 151/213 (70.89%), Query Frame = 1


Query: 104 NDGAEVNAEDSPQSVILAALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLT 163
           N+  E N++   Q+ +   ++SYKQAL + +E+ + EIE+    IE EK   ++K+ SL+
Sbjct: 62  NNSEEANSKQ--QADVKTLIRSYKQALLNGDETSVTEIETMFCKIEKEKNKMDQKVLSLS 121

Query: 164 EDLSVEKDRILRISADFENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVE 223
             ++ EK+  +R+ ADF+N RK+ +++RLS   NA+ +++++LL ++D+FE+A+ Q++V+
Sbjct: 122 MKIASEKEMKIRLQADFDNTRKKLDKDRLSTESNAKVQILKSLLPIIDSFEKAKLQVRVD 181

Query: 224 TEGEEKINQSYQSIYKQFNEILGSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGIILD 283
           T+ E+KI+ SYQ IY+QF E+L  L V  + TVGKPFDPLLHEAI RE+S   + GII +
Sbjct: 182 TDKEKKIDTSYQGIYRQFVEVLRYLRVSVIATVGKPFDPLLHEAISREESEAVKAGIITE 241

Query: 284 EFRKGFLLGDRLLRPSMVKVSAGPGPEKPAEAA 317
           E  KGF+LGDR+LRP+ VKVS GP  +K   AA
Sbjct: 242 ELNKGFVLGDRVLRPAKVKVSLGPVNKKTPSAA 272

[Close]

BLAST of CmoCh07G011670 vs. TAIR10
Match: AT4G26780.1 (AT4G26780.1 Co-chaperone GrpE family protein)

HSP 1 Score: 66.6 bits (161), Expect = 3.3e-11
Identity = 73/308 (23.70%), Postives = 133/308 (43.18%), Query Frame = 1


Query: 14  PPANVSTIFSSKSTLKSSSLSFRTSHSPFYCINSSKLSRPRSIRFPKLGPFASSGNTEVS 73
           P  N + +FSS+    +   S +   +    ++S  L R           F  S +T   
Sbjct: 26  PARNQTPVFSSRFHSLAHDFSHKLVPAQMSMMDSFALQR-----------FNFSSSTSPE 85

Query: 74  EVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSVILAALQSYKQALADN 133
             E++ H      +  S T  E   ++++   G +  ++DS         +  K A + +
Sbjct: 86  SDEKKTH------TEASKTSEEKPTAEAN-QPGLDSESKDSVTDSAKRKRKGAKGAASSS 145

Query: 134 NESQIAEIESFLKSIEDEKLAAERK--LKSLTEDLSVEKDRILRISADFENFRKRTERER 193
           +ES     +  L + +  KL AE++  L    E++   KD++LR  A+ EN   RT R+ 
Sbjct: 146 SESDSESDDDELSADDLVKLVAEKEELLSEKEEEIKQLKDKVLRTYAEMENVMDRTRRDA 205

Query: 194 LSLVKNAQGEVVETLLGVLDNFERARAQI-----KVETEGE--------EKINQSYQSIY 253
            +  K A     ++LL V DN  RA + +     K++T  +        + + +  +   
Sbjct: 206 ENTKKYAVQNFAKSLLDVADNLGRASSVVKESFSKLDTSEDSAGAAPLLKTLLEGVEMTE 265

Query: 254 KQFNEILGSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRP 307
           KQ  E+    G+   + + +PFDP  H A+ +       EG +    + G+ L DR++RP
Sbjct: 266 KQLAEVFKKFGMEKYDPINEPFDPNRHNAVFQVPDASKPEGTVAHVLKSGYTLYDRVIRP 315

[Close]

BLAST of CmoCh07G011670 vs. NCBI nr
Match: gi|449453123|ref|XP_004144308.1| (PREDICTED: grpE protein homolog, mitochondrial [Cucumis sativus])

HSP 1 Score: 496.1 bits (1276), Expect = 4.7e-137
Identity = 278/337 (82.49%), Postives = 301/337 (89.32%), Query Frame = 1


Query: 1   MATILRAPFFQATPPANVSTIFSSKSTLKSSSLSFRTSHSPFYCINSSKLS-RPRSIRFP 60
           MAT+LR PFFQATPPA+VS    SKSTLK SSLSF TSHS   C NSSK S RP S+RFP
Sbjct: 1   MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP 60

Query: 61  KLGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSVI 120
           K  PFASSG TE+SE+EEEV +SEAEDSSVSYTGVEDA SD+DI+D +EVN EDS QSVI
Sbjct: 61  KR-PFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVI 120

Query: 121 LAALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRISAD 180
           +AALQSYKQALADN+ +Q+ EIESFLKSIEDEKLA ERKL SL E+LSVEKDR+LRISAD
Sbjct: 121 IAALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISAD 180

Query: 181 FENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240
           F+NFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK
Sbjct: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240

Query: 241 QFNEILGSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPS 300
           QF EILGSLGVVPVET+GKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPS
Sbjct: 241 QFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPS 300

Query: 301 MVKVSAGPGPEKPAEAAAPSEEHDSSENYERSNTESS 337
           MVKVSAGPGPEK ++  AP+E+ DSSE +  S +ESS
Sbjct: 301 MVKVSAGPGPEK-SDETAPAEKLDSSEEFANSESESS 335

[Close]

BLAST of CmoCh07G011670 vs. NCBI nr
Match: gi|659111503|ref|XP_008455767.1| (PREDICTED: grpE protein homolog, mitochondrial [Cucumis melo])

HSP 1 Score: 494.2 bits (1271), Expect = 1.8e-136
Identity = 279/337 (82.79%), Postives = 301/337 (89.32%), Query Frame = 1


Query: 1   MATILRAPFFQATPPANVSTIFSSKSTLKSSSLSFRTSHSPFYCINSSKLS-RPRSIRFP 60
           MAT+LR PFFQAT PA+VS    SKSTLK SSLSF TSHS    INSSK S RP S+RFP
Sbjct: 1   MATLLRTPFFQATAPASVSAFSLSKSTLKPSSLSFTTSHSFICSINSSKFSTRPPSLRFP 60

Query: 61  KLGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSVI 120
           K  PFASSG TE+SE+EEEV +SEAEDSSVSYTGVEDA SD+DI+D +EVNAEDS QSVI
Sbjct: 61  KR-PFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNAEDSTQSVI 120

Query: 121 LAALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRISAD 180
           +AALQSYKQAL+DNN +QI EIESFLKSIEDEKLA ERKL SL E+LSVEKDR+LRISAD
Sbjct: 121 VAALQSYKQALSDNNGAQIVEIESFLKSIEDEKLAVERKLNSLIEELSVEKDRVLRISAD 180

Query: 181 FENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240
           F+NFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK
Sbjct: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240

Query: 241 QFNEILGSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPS 300
           QF EILGSLGVVPVET+GKPFDPLLHEAIMREDSTEFE+GIILDEFRKGFLLGDRLLRPS
Sbjct: 241 QFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEDGIILDEFRKGFLLGDRLLRPS 300

Query: 301 MVKVSAGPGPEKPAEAAAPSEEHDSSENYERSNTESS 337
           MVKVSAGPGPEK ++  AP+EE DSSE +  S +ESS
Sbjct: 301 MVKVSAGPGPEK-SDETAPAEELDSSEEFANSESESS 335

[Close]

BLAST of CmoCh07G011670 vs. NCBI nr
Match: gi|645270821|ref|XP_008240630.1| (PREDICTED: grpE protein homolog, mitochondrial [Prunus mume])

HSP 1 Score: 369.4 bits (947), Expect = 6.7e-99
Identity = 219/342 (64.04%), Postives = 260/342 (76.02%), Query Frame = 1


Query: 1   MATILRAPFFQATPPANVSTIFSSKSTLKSSSLSFRTSHS---PFYCINSSKLSRPRSIR 60
           MA +LR     AT     ST+  S ++ K S +SFR S S   P+  ++S + S   S+R
Sbjct: 1   MANVLRTSPLGATFAQLPSTL--SPNSPKPSYVSFRQSQSGSIPYLTLSSLRFSHLPSLR 60

Query: 61  FPKLGPFASSGNTEVSEVEEEVHE-SEAEDSSVSYTGVEDAASD---SDINDGAEVNAED 120
           F K  P AS G TE +E  EEV +  E EDSS     VED+ SD   S  ++  E +AE+
Sbjct: 61  FAKFVPLASQGETETTETVEEVRQPEEIEDSSDGAVSVEDSTSDDEESGTSNDDEGDAEE 120

Query: 121 SPQSVILAALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRI 180
            P S I+A+LQ YK+ALA N+ES++AEIESFLKSIEDEK++ E+K+ SL+E+LS EK RI
Sbjct: 121 KPVSAIIASLQLYKEALASNDESKVAEIESFLKSIEDEKISLEKKVASLSEELSAEKVRI 180

Query: 181 LRISADFENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQS 240
           LRISADFENFRKRT+RER+SLV NAQGEVVE+LL V+DNFERA+ QIKVETEGEEKIN S
Sbjct: 181 LRISADFENFRKRTDRERISLVTNAQGEVVESLLPVVDNFERAKTQIKVETEGEEKINNS 240

Query: 241 YQSIYKQFNEILGSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGD 300
           YQSIYKQF EIL SLGVVPVETVGKPFDPLLHEAIMREDSTEFEEG+I+DEFRKGF LGD
Sbjct: 241 YQSIYKQFGEILSSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGVIIDEFRKGFKLGD 300

Query: 301 RLLRPSMVKVSAGPGPEKPAEAAAPSEEHDSSENYERSNTES 336
           RLLRPSMVKVSAGPGP KP +   PSEE D+SE  +  +TE+
Sbjct: 301 RLLRPSMVKVSAGPGPAKPEQQVPPSEEQDASETTQEGSTET 340

[Close]

BLAST of CmoCh07G011670 vs. NCBI nr
Match: gi|595805720|ref|XP_007202333.1| (hypothetical protein PRUPE_ppa008162mg [Prunus persica])

HSP 1 Score: 364.4 bits (934), Expect = 2.2e-97
Identity = 217/342 (63.45%), Postives = 258/342 (75.44%), Query Frame = 1


Query: 1   MATILRAPFFQATPPANVSTIFSSKSTLKSSSLSFRTSHS---PFYCINSSKLSRPRSIR 60
           MA +LR     AT     ST+  S ++ K S +SFR S S   P+  ++S +     S+R
Sbjct: 1   MANVLRTSPLGATFAQLPSTL--SPNSPKPSYVSFRQSQSGSIPYLTLSSLRFPHLPSLR 60

Query: 61  FPKLGPFASSGNTEVSEVEEEVHE-SEAEDSSVSYTGVEDAASD---SDINDGAEVNAED 120
           F K  P AS G TE +E  EEV +  E EDSS     VED+ SD   S  ++  E +AE+
Sbjct: 61  FAKFVPLASQGETETTETVEEVRQPEEIEDSSDGAVSVEDSTSDGEESGTSNDDEGDAEE 120

Query: 121 SPQSVILAALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRI 180
            P S I+A+LQ YK+ALA N+ES++AEIESFLK IEDEK++ E+K+ SL+E+LS EK RI
Sbjct: 121 KPVSAIIASLQLYKEALASNDESKVAEIESFLKYIEDEKISLEKKVASLSEELSAEKVRI 180

Query: 181 LRISADFENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQS 240
           LRISADFENFRKRT+RER+SLV NAQGEVVE+LL V+DNFERA+ QIKVETEGEEKIN S
Sbjct: 181 LRISADFENFRKRTDRERISLVTNAQGEVVESLLPVVDNFERAKTQIKVETEGEEKINNS 240

Query: 241 YQSIYKQFNEILGSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGD 300
           YQSIYKQF EIL SLGVVPVETVGKPFDPLLHEAIMREDSTEFEEG+I+DEFRKGF LGD
Sbjct: 241 YQSIYKQFGEILSSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGVIIDEFRKGFKLGD 300

Query: 301 RLLRPSMVKVSAGPGPEKPAEAAAPSEEHDSSENYERSNTES 336
           RLLRPSMVKVSAGPGP KP +   PSEE D+SE  +  +TE+
Sbjct: 301 RLLRPSMVKVSAGPGPAKPDQQVPPSEEQDASETTKEGSTET 340

[Close]

BLAST of CmoCh07G011670 vs. NCBI nr
Match: gi|802585296|ref|XP_012070349.1| (PREDICTED: grpE protein homolog, mitochondrial [Jatropha curcas])

HSP 1 Score: 356.7 bits (914), Expect = 4.5e-95
Identity = 214/347 (61.67%), Postives = 260/347 (74.93%), Query Frame = 1


Query: 1   MATILRAPFFQATPPANVSTIFSSKSTLKSSS---LSFRTSHSPFYCINSSKLSRPRSIR 60
           MAT+L+ P  +A  P  + T  ++  +L+S +   LSFR          S+++SR   +R
Sbjct: 1   MATVLKTPPLRAQVPPRLITTATNNLSLQSPNPFCLSFRRRSI------STEVSRTSCLR 60

Query: 61  FP--------KLGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEV 120
           FP        K  PFA+ G TE +E EE + E E +DSS    GVE +A + + +  +E 
Sbjct: 61  FPVKSSHRFIKFVPFATQGETETTETEETIQEPEIQDSSDGAVGVEGSADELEDSSSSE- 120

Query: 121 NAEDSPQ--SVILAALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLS 180
            A+D+ +  SVILA+LQSYK+ALA N+ES+I EIE+FLKS+EDEK+  E+K+ SL++DLS
Sbjct: 121 EADDTKEAPSVILASLQSYKEALASNDESKIVEIEAFLKSVEDEKINLEQKVVSLSQDLS 180

Query: 181 VEKDRILRISADFENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGE 240
            EKDRILRISADF+NFRKRTERERLSL+ NAQGEVVE+LL VLDNFERA++QIK+ETEGE
Sbjct: 181 TEKDRILRISADFDNFRKRTERERLSLLTNAQGEVVESLLPVLDNFERAKSQIKLETEGE 240

Query: 241 EKINQSYQSIYKQFNEILGSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGIILDEFRK 300
           EKIN SYQSIYKQF EILGSLGVVPVET+GKPFDPLL EAIMREDSTEFEEGIILDEFRK
Sbjct: 241 EKINNSYQSIYKQFVEILGSLGVVPVETIGKPFDPLLQEAIMREDSTEFEEGIILDEFRK 300

Query: 301 GFLLGDRLLRPSMVKVSAGPGPEKPAEAAAPSEEHDSSENYERSNTE 335
           GF LGDRLLRP+MVKVSAGPGP K  EA +P E   +SE  E S  E
Sbjct: 301 GFKLGDRLLRPAMVKVSAGPGPAKAEEAGSPGEAETASETNEESAAE 340

The following BLAST results are available for this feature:

BLAST of CmoCh07G011670 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GRPE_THEEB	5.8e-34	45.98	Protein GrpE OS=Thermosynechococcus elongatus (strain BP-1) GN=grpE PE=3 SV=1	[more]
GRPE_SYNPX	2.4e-32	42.01	Protein GrpE OS=Synechococcus sp. (strain WH8102) GN=grpE PE=3 SV=1	[more]
GRPE_SYNE7	3.2e-32	47.37	Protein GrpE OS=Synechococcus elongatus (strain PCC 7942) GN=grpE PE=3 SV=2	[more]
GRPE_NOSS1	4.1e-32	44.97	Protein GrpE OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=grpE PE=3 SV=1	[more]
GRPE_ANAVT	4.1e-32	44.97	Protein GrpE OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=grpE PE=3 ...	[more]

BLAST of CmoCh07G011670 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L229_CUCSA	3.3e-137	82.49	GrpE protein homolog OS=Cucumis sativus GN=Csa_4G417510 PE=3 SV=1	[more]
M5VQG4_PRUPE	1.5e-97	63.45	GrpE protein homolog OS=Prunus persica GN=PRUPE_ppa008162mg PE=3 SV=1	[more]
A0A067L6A9_JATCU	3.1e-95	61.67	GrpE protein homolog OS=Jatropha curcas GN=JCGZ_02644 PE=3 SV=1	[more]
B9SY85_RICCO	1.5e-92	59.26	GrpE protein homolog OS=Ricinus communis GN=RCOM_0845250 PE=3 SV=1	[more]
B9I664_POPTR	2.1e-91	60.06	GrpE protein homolog OS=Populus trichocarpa GN=POPTR_0013s06430g PE=3 SV=1	[more]

BLAST of CmoCh07G011670 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17710.2	2.1e-82	55.49	Co-chaperone GrpE family protein	[more]
AT1G36390.1	8.3e-47	46.01	Co-chaperone GrpE family protein	[more]
AT4G26780.1	3.3e-11	23.70	Co-chaperone GrpE family protein	[more]

BLAST of CmoCh07G011670 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449453123\|ref\|XP_004144308.1\|	4.7e-137	82.49	PREDICTED: grpE protein homolog, mitochondrial [Cucumis sativus]	[more]
gi\|659111503\|ref\|XP_008455767.1\|	1.8e-136	82.79	PREDICTED: grpE protein homolog, mitochondrial [Cucumis melo]	[more]
gi\|645270821\|ref\|XP_008240630.1\|	6.7e-99	64.04	PREDICTED: grpE protein homolog, mitochondrial [Prunus mume]	[more]
gi\|595805720\|ref\|XP_007202333.1\|	2.2e-97	63.45	hypothetical protein PRUPE_ppa008162mg [Prunus persica]	[more]
gi\|802585296\|ref\|XP_012070349.1\|	4.5e-95	61.67	PREDICTED: grpE protein homolog, mitochondrial [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000740	GrpE
IPR009012	GrpE_head
IPR013805	GrpE_coiled_coil

Vocabulary: **Molecular Function**
Term	Definition
GO:0000774	adenyl-nucleotide exchange factor activity
GO:0042803	protein homodimerization activity
GO:0051087	chaperone binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005759	mitochondrial matrix
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0000774	adenyl-nucleotide exchange factor activity
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0016853	isomerase activity
molecular_function	GO:0042803	protein homodimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G011670.1	CmoCh07G011670.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000740	GrpE nucleotide exchange factor	PRINTS	PR00773	GRPEPROTEIN	coord: 202..217 score: 2.1E-25coord: 284..303 score: 2.1E-25coord: 174..190 score: 2.1E-25coord: 257..272 score: 2.1
IPR000740	GrpE nucleotide exchange factor	HAMAP	MF_01151	GrpE	coord: 76..305 score: 18
IPR000740	GrpE nucleotide exchange factor	PANTHER	PTHR21237	GRPE PROTEIN	coord: 2..89 score: 1.7E-144coord: 131..308 score: 1.7E
IPR000740	GrpE nucleotide exchange factor	PFAM	PF01025	GrpE	coord: 149..304 score: 3.5
IPR000740	GrpE nucleotide exchange factor	PROSITE	PS01071	GRPE	coord: 260..303 scor
IPR009012	GrpE nucleotide exchange factor, head	GENE3D	G3DSA:2.30.22.10		coord: 249..307 score: 5.7
IPR009012	GrpE nucleotide exchange factor, head	unknown	SSF51064	Head domain of nucleotide exchange factor GrpE	coord: 251..306 score: 7.06
IPR013805	GrpE nucleotide exchange factor, coiled-coil	GENE3D	G3DSA:3.90.20.20		coord: 149..246 score: 6.8
None	No IPR available	unknown	Coil	Coil	coord: 138..172 scor
None	No IPR available	PANTHER	PTHR21237:SF27	GRPE PROTEIN HOMOLOG	coord: 2..89 score: 1.7E-144coord: 131..308 score: 1.7E
None	No IPR available	unknown	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE	coord: 155..249 score: 3.14

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh07G011670	CmaCh03G001690	Cucurbita maxima (Rimu)	cmacmoB668
CmoCh07G011670	CmaCh07G011170	Cucurbita maxima (Rimu)	cmacmoB875
CmoCh07G011670	Cla012065	Watermelon (97103) v1	cmowmB818
CmoCh07G011670	Csa4G417510	Cucumber (Chinese Long) v2	cmocuB855
CmoCh07G011670	MELO3C019156	Melon (DHL92) v3.5.1	cmomeB786
CmoCh07G011670	ClCG04G006040	Watermelon (Charleston Gray)	cmowcgB764
CmoCh07G011670	CSPI04G18710	Wild cucumber (PI 183967)	cmocpiB863
CmoCh07G011670	Lsi01G017400	Bottle gourd (USVL1VR-Ls)	cmolsiB779
CmoCh07G011670	Cp4.1LG10g10790	Cucurbita pepo (Zucchini)	cmocpeB807
CmoCh07G011670	Cp4.1LG19g02320	Cucurbita pepo (Zucchini)	cmocpeB817
CmoCh07G011670	MELO3C019156.2	Melon (DHL92) v3.6.1	cmomedB891
CmoCh07G011670	CsaV3_4G029080	Cucumber (Chinese Long) v3	cmocucB1005
CmoCh07G011670	Cla97C04G072600	Watermelon (97103) v2	cmowmbB862
CmoCh07G011670	Bhi03G002091	Wax gourd	cmowgoB1056
CmoCh07G011670	CsGy4G017780	Cucumber (Gy14) v2	cgybcmoB542
CmoCh07G011670	Carg13330	Silver-seed gourd	carcmoB0795

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh07G011670	CmoCh03G001980	Cucurbita moschata (Rifu)	cmocmoB456

The following block(s) are covering this gene:

None