CsGy4G011390 (gene) Cucumber (Gy14) v2

Overview
NameCsGy4G011390
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr4 : 10967102 .. 10967539 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTCGCTTCCATCCATGCAACTTCTCCAACACAATCAACCAAAACCTCTACGACATCATCATCTTGTCGTGCCAGGTTTCACGTATCTGACTTTGAATCCATCAAACCATTGTTGTTGACTTTGGCTCCTCAAGTGAAGACAATGTGATTTTGTCTAATATTCTCAAATGAAAGGCCTCAACAACTATCTCCCCTCATAAAGGAACACCGCTGGACAAATGCAAGAAACCCTTTGTCTCGGGTTTATCTAACGCTGACAATCTCTATGAAGCCCTATTCGGTACCTTCTTTGGTCCACGACATGCCCTCCCCATGGGCTCTGTTCCGTCATCCTCATGGCTTGGCTCATCGGCTCCTCGAAAACTACTTAAAACCATTATTGAAGATCTATTCACTGAGTTCGCTCAAGATCTAGAAGGACTCTCCTCCAGGCTTCAT

mRNA sequence

TGTCGCTTCCATCCATGCAACTTCTCCAACACAATCAACCAAAACCTCTACGACATCATCATCTTGTCGTGCCAGGCCTCAACAACTATCTCCCCTCATAAAGGAACACCGCTGGACAAATGCAAGAAACCCTTTGTCTCGGGTTTATCTAACGCTGACAATCTCTATGAAGCCCTATTCGGTACCTTCTTTGGTCCACGACATGCCCTCCCCATGGGCTCTGTTCCGTCATCCTCATGGCTTGGCTCATCGGCTCCTCGAAAACTACTTAAAACCATTATTGAAGATCTATTCACTGAGTTCGCTCAAGATCTAGAAGGACTCTCCTCCAGGCTTCAT

Coding sequence (CDS)

TGTCGCTTCCATCCATGCAACTTCTCCAACACAATCAACCAAAACCTCTACGACATCATCATCTTGTCGTGCCAGGCCTCAACAACTATCTCCCCTCATAAAGGAACACCGCTGGACAAATGCAAGAAACCCTTTGTCTCGGGTTTATCTAACGCTGACAATCTCTATGAAGCCCTATTCGGTACCTTCTTTGGTCCACGACATGCCCTCCCCATGGGCTCTGTTCCGTCATCCTCATGGCTTGGCTCATCGGCTCCTCGAAAACTACTTAAAACCATTATTGAAGATCTATTCACTGAGTTCGCTCAAGATCTAGAAGGACTCTCCTCCAGGCTTCAT

Protein sequence

CRFHPCNFSNTINQNLYDIIILSCQASTTISPHKGTPLDKCKKPFVSGLSNADNLYEALFGTFFGPRHALPMGSVPSSSWLGSSAPRKLLKTIIEDLFTEFAQDLEGLSSRLH
Homology
[Close]
BLAST of CsGy4G011390 vs. NCBI nr
Match: KGN54004.1 (hypothetical protein Csa_4G256930 [Cucumis sativus])

HSP 1 Score: 166.0 bits (419), Expect = 7.4e-38
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 35  GTPLDKCKKPFVSGLSNADNLYEALFGTFFGPRHALPMGSVPSSSWLGSSAPRKLLKTII 94
           GTPLDKCKKPFVSGLSNADNLYEALFGTFFGPRHALPMGSVPSSSWLGSSAPRKLLKTII
Sbjct: 26  GTPLDKCKKPFVSGLSNADNLYEALFGTFFGPRHALPMGSVPSSSWLGSSAPRKLLKTII 85

Query: 95  EDLFTEFAQDLEGLSSRLH 114
           EDLFTEFAQDLEGLSSRLH
Sbjct: 86  EDLFTEFAQDLEGLSSRLH 104

[Close]
BLAST of CsGy4G011390 vs. TrEMBL
Match: tr|A0A0A0KYY8|A0A0A0KYY8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G256930 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.9e-38
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 35  GTPLDKCKKPFVSGLSNADNLYEALFGTFFGPRHALPMGSVPSSSWLGSSAPRKLLKTII 94
           GTPLDKCKKPFVSGLSNADNLYEALFGTFFGPRHALPMGSVPSSSWLGSSAPRKLLKTII
Sbjct: 26  GTPLDKCKKPFVSGLSNADNLYEALFGTFFGPRHALPMGSVPSSSWLGSSAPRKLLKTII 85

Query: 95  EDLFTEFAQDLEGLSSRLH 114
           EDLFTEFAQDLEGLSSRLH
Sbjct: 86  EDLFTEFAQDLEGLSSRLH 104

The following BLAST results are available for this feature:
BLAST of CsGy4G011390 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54004.17.4e-38100.00hypothetical protein Csa_4G256930 [Cucumis sativus][more]
BLAST of CsGy4G011390 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy4G011390 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy4G011390 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KYY8|A0A0A0KYY8_CUCSA4.9e-38100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G256930 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G011390.1CsGy4G011390.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy4G011390Csa4G256930Cucumber (Chinese Long) v2cgybcuB168
CsGy4G011390CSPI04G12380Wild cucumber (PI 183967)cgybcpiB171
CsGy4G011390CsaV3_4G016040Cucumber (Chinese Long) v3cgybcucB171
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None