CsGy4G009910 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G009910
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	non-specific lipid-transfer protein 2P-like
Location	Chr4 : 8403871 .. 8408132 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAATTTTCCTATCACAATCGTTGTTTGCATTTTCGTGGTGGCAACCACGGTGGCTCTTCTTAACGGCGCTCCTCCGGTGGTTGCTCAAGTGGAATGCGACCCATCACAGCTCTCGTCATGCACAGCAGCATTTTTTGGGATGACGCCCAGTCAGACATGTTGCAACAAGTTGAGAGAGGCACAACCATGCTACTGTGAATATCTCAATGATCCAAATTTGAGGAGTTTCGTGAATTCTAGTGCGGCTAAAAGAATTGCTAAATCCTGCAACATTAGCTTCCCAACTGAGGCTGACTGCTCTAAATAGAAACCCTACTTACTTGAGTTTGGACTCTTCTACAAGAATTAAGTATTGTTATGTCTCTTTAGTTTAATCTAATATACAATATTCTGATCCCAACTAAAAATAAAGGGAAAACCAACCTATACTTTCTATATAAATTAAAAGCTCAATATTACGTTTTAATATACCGTCTTACCCATTATGAGTTAATAATAAGTCAGTAGATAGACATCTCAAATTGGTATTATGGCTAGTGCTGTCTTTAAGGGTTTAATTTTGTTATTTTGTCAGATATATTCCATCGTTGGAAATATTAATTAAGCTAAAAATAATAGAAGATTAAGTCAACATTACCTCTTTTTGAAGAAAAGAAACTTTGCCCTTCTCCTGCAAAAACTAATTAAATCTTTTTATTCTATGAAATTTGGTTGTCATTTAAATGTTTTTCGTTTCTATTTATTTAAAAGTTACTTCATCCACTTTGTATTCAGGAGAGATACTCGGTTTGTCAACCTCCTTTTACTATATTATAATTTGGTGCGTTCAGCTCAAGCTAAGAGCTTTAATTTTTGCAATATTAGTTTATATCACATTTGAACAATATATATATATCTATACACATTTGAACAATATATTATATCACATTTGAATAGTCTATATATATATATACACACACATACACACATATATAAGGGTTTTTAAAAAAATTATAACAAATCAATAACATATTTACACTATACTGAACAATTTTGCAAACGGAAAACTCCAAGGCCTACAATAGAAAATATAAAAAATATCTTAGTCAAGATGCAATTAATCGACCACAGTCGCGTGCGAATAATTTTCTTCTAAACGATCGTGTCTTACCCTCTCAACGAATGACAAACGATTGTGTAATTCTTTTTTAATAGAGGAAAGAAAACGTCAAATTAAAATAATCATGTTGACCATGACAAACGATTGTGTTATCATGGAACACGATCATGTTGATTATAGTTAGCGATCGTATACTCCAATATAAATGATATTTAAAAACCTTAAATCTAACGATCGTGTTGACCATGGTGAACGATCGTGTTAATTAGTGTTGATTATGGTAAACGATCGTGTACTCCAATATAAATGATATTTAAAAACTAAATCTAACGATCGTGTTGACCACGGTAAACGATCGTGATTATTATGATAAACGATCATTCAGACCATATATAGTTCTTTTAAACGATCATTCAGATCGTGATTACTTTTAATAATAGAGTTCATGTCACTTATATTTTTAAAATTGTGAAAATAACAAATTTAGAAATAGATTGAAAAAAAAGTGTTATGAGCTAATGATCCAAAGGTATATGATATGGTTCTTCTCTTCCCATTTCTGTTAACAAAAAAAAGGCTTAAAAGTTCATTATTTTGAACCATTTATAAACCAATCTCAAATCACTGTATTGTAGATTAACTATAGTGATTAAAAAAGTCTACTCTAGATTATCCCTCTGTCTAGACACGCTTAGTCTTTAAAACTTTGGACACTAATCAAAATTTAACTAATGCAATCTTTAAACACTAATCAAAATTGAACTAATTAAGGCCTAAAACTTTGAACACTAATTAAAGTTTATTCACTGCACAATTATATCATCATCCAAATACTGATAAATGAAAATTAATTAACATAATGAAAAGCTTGGTAAAGTCAAACAAGTAAATTGCCATCATTTGTTTGGGAATTTTATGTTTCTTAAAGATTAGTGTCACGTGACAAAATTCGTTGCCACACATTTGTAACTATATCACAAAAAATTAATAATCTGTAAGTGTTATTTTTACGATTTTTTTGGATCTATCAACAATAGACTGAACCATTTTAATAGTCAATACACTAAATTGTTTTTGTATGGTTGATTGCTAAAAAATTTGTAGGTTTATCATTATTGATAGATGTCTATCATTTATGAACCACTTTAATATTTTTGTGAATTAACAATATATATTTTATCAAGAGAAATTTACATGAATAAGAAAAAGTGAAAGTGTTTACCCTGTATGACAGAAAAATGAAGCGAAATAATAGGTTTTCTGGATAATTCATGGTCGAACATAGATAATTGATACAAAACATTAGTTATAAGGCTCACTCTTCATCTAGTCGGTATAAAATAACTATCTAATAAGTCTAAGCTAAATCTACTATCTACGCTAGAATATGTAAAAGGGGACAAAAATAGTGGCTAGATGAAAATGTGAACTAACTTGTATTAAAAAGTGGCAAGGAAGGTCTTCGTGTTATTAGGCAATTAAGCCATCTAGCTTATAATTAAGTTGAGCACCTCTCAGTGCCTTAAACTCACACTAGCTTGCCTTCTCGAGATACAAATGATAAAACTTGGTTAAGACGGATCTATCTAAAAGTGTTTACTTACCAGACTTATAAAACTTCTCTTTTAAGGGTGCAGAGAAGAAGAAGAATGACTTTTTACAGAGGACAAAAAGACTACTCCTTTCCGCCACTTTTAGGGTTTGGTCGATCCATTTAGATGTTTGACTCCTTTCGAAGTCGACCACTTTACTTGGTAAGGATGGAGTCTTTTTATAGGCATCTTTCGATGGAAAACATCTATTCTTCTGATCATGTCAGTGTCGATTGTAGCATTTGTCAAGTTACATCAACCCCAACTACCATTCTTGTCTTCTAGTGAACCTTTCTCGCGTGATGACGTAATTCCTCACCTCAGGATTATACTCACCAGACAAGATTCTCTCGCGTAGTCTTTTGCATGGGCTCTTATATGATTCACTAATATCTTCATTTATTCATAATTATGAGTTAAAACACTAAAAACCAAGGTAAAACAGACACAAAGACTTATGTAAGGTGTATTTTCCTAATAGTTATGAATTTTCAATCGAAGTTAACATAAAATTTTCTGTCAAGCAACAACGTTGCCACCCTAAACTCTATAATTTAAGGTAAGGGGTTTATTACACCAAATCCTTGACATGAGTAAGACTGAGATTGATCATGTGATTATATATTGATTATATATTGGGTTGGTTTAATAGGCATTGATAGTATGACTGATTTAATTGATGACTCATAATGAAATACTTGAGACATGATGGTTATGAATGAGGTTATTGAATATATTTTACATGTTATGTTTATGACTGAATTGAATTGAGAATGACTAAACTAGGATGTGTTTGAACTAATGACAACTATTAACTTTGATTATTAGGTTAATATATACCCTATATGTATAGTGTTCTATAGGATCCCCACTTATAGGTAGTGCATTAAGTGGATAACTTTTACTATTGATGTGTGCTCTATGAACTACTAGACTGATCTCTTACTGGGTATTTGTTCAATTTTTCAAACAAAGACAAGGCCGGTAAGAAGGATCTACGATTGTGATTGTGCCATTTGGAACTATTGTGACAATGCTTTCGCTACTTTATTTTTGTTTTCATGTTTTAGAGCCACATGTCTATTGATAGATTTATCCTAAACTCATGATTGGTCCAAATAAATTACTTTTTTGGTGATTGGTTATTATATTTTACTAAACATTTTGGTTTCTGTTTAGATTGTTTTATTGATTTTATTTCTTTATTTAATTAAAATGAATTAAACTTTGCGTAGTTTTCAGTTGGTAACATGTTATTTTTGAAATAATCTACACACAAATTGCATAAGCAGAAATTAAAACTTGTGTCGGCAGAAACCCAAACTTCATGGGTTTCACTAACATCAATCAACTCTCTCCAAGGATATATTTTTCTTACGCGAAACATGGTGTTATACCTTTGCATAGAAAATCCATCAACATAAATCATCTTTATTGACATGTTTGTTACGTCGGAAACAGAAATTGTTCACCCAGCTAAAGAAATATCCTTTTCTTGCTGCAGGCTCACTGGATGTTGGCCCTCCAGAGGTCGACTGTTCTCCCAATACTCTGCATCAACCATAA

mRNA sequence

ATGAAGAATTTTCCTATCACAATCGTTGTTTGCATTTTCGTGGTGGCAACCACGGTGGCTCTTCTTAACGGCGCTCCTCCGGTGGTTGCTCAAGTGGAATGCGACCCATCACAGCTCTCGTCATGCACAGCAGCATTTTTTGGGATGACGCCCAGTCAGACATGTTGCAACAAGTTGAGAGAGGCACAACCATGCTACTGTGAATATCTCAATGATCCAAATTTGAGGAGTTTCGCATTGATAAAAATCCATCAACATAAATCATCTTTATTGACATGTTTGTTACGTCGGAAACAGAAATTGTTCACCCAGCTAAAGAAATATCCTTTTCTTGCTGCAGGCTCACTGGATGTTGGCCCTCCAGAGGTCGACTGTTCTCCCAATACTCTGCATCAACCATAA

Coding sequence (CDS)

ATGAAGAATTTTCCTATCACAATCGTTGTTTGCATTTTCGTGGTGGCAACCACGGTGGCTCTTCTTAACGGCGCTCCTCCGGTGGTTGCTCAAGTGGAATGCGACCCATCACAGCTCTCGTCATGCACAGCAGCATTTTTTGGGATGACGCCCAGTCAGACATGTTGCAACAAGTTGAGAGAGGCACAACCATGCTACTGTGAATATCTCAATGATCCAAATTTGAGGAGTTTCGCATTGATAAAAATCCATCAACATAAATCATCTTTATTGACATGTTTGTTACGTCGGAAACAGAAATTGTTCACCCAGCTAAAGAAATATCCTTTTCTTGCTGCAGGCTCACTGGATGTTGGCCCTCCAGAGGTCGACTGTTCTCCCAATACTCTGCATCAACCATAA

Protein sequence

MKNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMTPSQTCCNKLREAQPCYCEYLNDPNLRSFALIKIHQHKSSLLTCLLRRKQKLFTQLKKYPFLAAGSLDVGPPEVDCSPNTLHQP

Homology

[Close]

BLAST of CsGy4G009910 vs. NCBI nr
Match: XP_011653423.1 (PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis sativus] >KGN53817.1 putative lipid transfer protein family protein [Cucumis sativus])

HSP 1 Score: 159.8 bits (403), Expect = 6.2e-36
Identity = 76/78 (97.44%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1  MKNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMTPSQTCCNKLR 60
          MKNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMTPSQTCCNKLR
Sbjct: 1  MKNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMTPSQTCCNKLR 60

Query: 61 EAQPCYCEYLNDPNLRSF 79
          EAQPCYCEY+NDP+LRSF
Sbjct: 61 EAQPCYCEYINDPDLRSF 78

[Close]

BLAST of CsGy4G009910 vs. NCBI nr
Match: XP_008444079.1 (PREDICTED: non-specific lipid-transfer protein 2P-like [Cucumis melo])

HSP 1 Score: 120.9 bits (302), Expect = 3.2e-24
Identity = 59/79 (74.68%), Postives = 63/79 (79.75%), Query Frame = 0


Query: 1  MKNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAF-FGMTPSQTCCNKL 60
          MKNFPIT+VVCIFVVATTVALLNG PPV AQ  CD SQLSSC  AF FG  P+Q CC KL
Sbjct: 1  MKNFPITLVVCIFVVATTVALLNGPPPVAAQTVCDASQLSSCAPAFLFGGNPNQECCTKL 60

Query: 61 REAQPCYCEYLNDPNLRSF 79
          R  QPCYCEY  DPNL++F
Sbjct: 61 RAEQPCYCEYFGDPNLQNF 79

[Close]

BLAST of CsGy4G009910 vs. NCBI nr
Match: XP_022955426.1 (non-specific lipid-transfer protein 2-like [Cucurbita moschata])

HSP 1 Score: 72.4 bits (176), Expect = 1.3e-09
Identity = 41/79 (51.90%), Postives = 48/79 (60.76%), Query Frame = 0


Query: 1  MKNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAF-FGMTPSQTCCNKL 60
          MK FPITI      +A  VALL+GA  V   V C P +LSSC  A     TPS TCCNKL
Sbjct: 1  MKKFPITI--AFLFMAVMVALLSGA-RVAEAVNCSPMELSSCAGAITSSSTPSSTCCNKL 60

Query: 61 REAQPCYCEYLNDPNLRSF 79
          RE +PC C Y+ +P LR +
Sbjct: 61 REQKPCLCGYIRNPALRPY 76

[Close]

BLAST of CsGy4G009910 vs. NCBI nr
Match: KJB60036.1 (hypothetical protein B456_009G286700 [Gossypium raimondii])

HSP 1 Score: 67.8 bits (164), Expect = 3.2e-08
Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = 0


Query: 30 AQVECDPSQLSSCTAAFFGMT-PSQTCCNKLREAQPCYCEYLNDPNLRSFA 80
          A V C+P +LS C AA    T PS+TCC++LRE  PC+C YLNDP+LR FA
Sbjct: 17 AAVTCNPIELSPCLAAVMSSTPPSETCCSRLREQTPCFCGYLNDPSLRQFA 67

[Close]

BLAST of CsGy4G009910 vs. NCBI nr
Match: XP_016684656.1 (PREDICTED: non-specific lipid-transfer protein 2-like [Gossypium hirsutum] >PPD98460.1 hypothetical protein GOBAR_DD04500 [Gossypium barbadense])

HSP 1 Score: 67.8 bits (164), Expect = 3.2e-08
Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = 0


Query: 30 AQVECDPSQLSSCTAAFFGMT-PSQTCCNKLREAQPCYCEYLNDPNLRSFA 80
          A V C+P +LS C AA    T PS+TCC++LRE  PC+C YLNDP+LR FA
Sbjct: 36 AAVTCNPIELSPCLAAVMSSTPPSETCCSRLREQTPCFCGYLNDPSLRQFA 86

[Close]

BLAST of CsGy4G009910 vs. TAIR10
Match: AT5G38170.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 57.0 bits (136), Expect = 1.0e-08
Identity = 34/91 (37.36%), Postives = 46/91 (50.55%), Query Frame = 0


Query: 4  FPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSC-TAAFFGMTPSQTCCNKLREA 63
          F + ++V    +  T   L+G     A V CD  QLSSC T    G+ PS  CC KL+E 
Sbjct: 11 FVVGVMVSPVSIRATEVKLSGGE---ADVTCDAVQLSSCATPMLTGVPPSTECCGKLKEQ 70

Query: 64 QPCYCEYLNDPNLRSFALIKIHQHKSSLLTC 94
          QPC+C Y+ DP    +  +     K +L TC
Sbjct: 71 QPCFCTYIKDPRYSQY--VGSANAKKTLATC 96

[Close]

BLAST of CsGy4G009910 vs. TAIR10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 55.8 bits (133), Expect = 2.3e-08
Identity = 30/71 (42.25%), Postives = 38/71 (53.52%), Query Frame = 0


Query: 9  VVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAF-FGMTPSQTCCNKLREAQPCYC 68
          V+ + V+A   A+L    PV   V C P QL+SC AA          CC KLRE QPC C
Sbjct: 4  VMWVSVLALAAAILLLTVPVAEGVTCSPMQLASCAAAMXXXXXXXXACCTKLREQQPCLC 63

Query: 69 EYLNDPNLRSF 79
           Y+ +P LR +
Sbjct: 64 GYMRNPTLRQY 74

[Close]

BLAST of CsGy4G009910 vs. TAIR10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 52.8 bits (125), Expect = 1.9e-07
Identity = 28/70 (40.00%), Postives = 39/70 (55.71%), Query Frame = 0


Query: 12 IFVVATTVALLNGAPP--VVAQVECDPSQLSSCTAAFF-GMTPSQTCCNKLREAQPCYCE 71
          +F   T + +L  A    V A   C+P+QLS C      G  PS  CC+K++E Q C C+
Sbjct: 9  VFFTCTILLILIVAQENRVAAVDPCNPAQLSPCLETIMKGSEPSDLCCSKVKEQQHCICQ 68

Query: 72 YLNDPNLRSF 79
          YL +PN +SF
Sbjct: 69 YLKNPNFKSF 78

[Close]

BLAST of CsGy4G009910 vs. TAIR10
Match: AT5G38160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 47.4 bits (111), Expect = 8.1e-06
Identity = 29/78 (37.18%), Postives = 41/78 (52.56%), Query Frame = 0


Query: 8  IVVCIFVVATTVALLNGAPPVV------AQVECDPSQLSSC-TAAFFGMTPSQTCCNKLR 67
          +V  +FV+ T ++ +     VV        V CD +QLSSC TA   G  PS  CC KL+
Sbjct: 6  VVFILFVLGTMLSPVPVKARVVKGSGEEVNVTCDATQLSSCVTAVSTGAPPSTDCCGKLK 65

Query: 68 EAQPCYCEYLNDPNLRSF 79
          E + C C Y+ +P   S+
Sbjct: 66 EHETCLCTYIQNPLYSSY 83

[Close]

BLAST of CsGy4G009910 vs. TAIR10
Match: AT1G07747.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 42.4 bits (98), Expect = 2.6e-04
Identity = 20/56 (35.71%), Postives = 30/56 (53.57%), Query Frame = 0


Query: 21 LLNGAPPVVAQ--VECDPSQLSSCTAAFFGMTPSQT-CCNKLREAQPCYCEYLNDP 74
          +L+   P  A+    C  + L +C     G TP  T CC KL++ + C+CEYL +P
Sbjct: 14 VLSSMAPTKAEEKAACVVTDLKACLPDIIGETPPSTKCCTKLKDKKSCFCEYLKNP 69

[Close]

BLAST of CsGy4G009910 vs. Swiss-Prot
Match: sp|P86809|NLTP2_APIGA (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.1e-07
Identity = 25/46 (54.35%), Postives = 30/46 (65.22%), Query Frame = 0


Query: 34 CDPSQLSSCTAAFFGMT-PSQTCCNKLREAQPCYCEYLNDPNLRSF 79
          C   QLS C AA    T PS  CCNKL+E +PC C YL DPNL+++
Sbjct: 3  CSAVQLSPCLAAITKNTPPSAACCNKLKEQKPCLCGYLKDPNLKNY 48

[Close]

BLAST of CsGy4G009910 vs. Swiss-Prot
Match: sp|P82353|NLTP2_PRUAR (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.6e-06
Identity = 24/48 (50.00%), Postives = 28/48 (58.33%), Query Frame = 0


Query: 32 VECDPSQLSSCTAAFFGMTPS-QTCCNKLREAQPCYCEYLNDPNLRSF 79
          V C P QLS C        PS  TCC KLRE +PC C YL +P+LR +
Sbjct: 1  VTCSPVQLSPCLGPINSGAPSPTTCCQKLREQRPCLCGYLKNPSLRQY 48

[Close]

BLAST of CsGy4G009910 vs. Swiss-Prot
Match: sp|Q43681|NLTP_VIGUN (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.7e-05
Identity = 22/44 (50.00%), Postives = 28/44 (63.64%), Query Frame = 0


Query: 27 PVVAQVECDPSQLSSCTAAFF-GMTPSQTCCNKLREAQPCYCEY 70
          PV   V C+P++LSSC  A   G  PS TCC+KL+  +PC C Y
Sbjct: 27 PVAEAVTCNPTELSSCVPAITGGSKPSSTCCSKLKVQEPCLCNY 70

[Close]

BLAST of CsGy4G009910 vs. Swiss-Prot
Match: sp|P82901|NLT2P_WHEAT (Non-specific lipid-transfer protein 2P OS=Triticum aestivum OX=4565 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 6.6e-05
Identity = 23/61 (37.70%), Postives = 32/61 (52.46%), Query Frame = 0


Query: 34 CDPSQLSSCTAAFF-GMTPSQTCCNKLREAQPCYCEYLNDPNLRSFALIKIHQHKSSLLT 93
          C  SQL+ C +A   G  PS  CC  LR  QPC+C+Y  DP    +  I+    + +L +
Sbjct: 2  CQASQLAVCASAILSGAKPSGECCGNLRAQQPCFCQYAKDPTYGQY--IRSPHARDTLQS 60

[Close]

BLAST of CsGy4G009910 vs. Swiss-Prot
Match: sp|P82900|NLT2G_WHEAT (Non-specific lipid-transfer protein 2G OS=Triticum aestivum OX=4565 PE=1 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 1.9e-04
Identity = 29/82 (35.37%), Postives = 41/82 (50.00%), Query Frame = 0


Query: 14 VVATTVAL-LNGAPPVVAQVECDPSQLSSCTAAFF-GMTPSQTCCNKLREAQPCYCEYLN 73
          V A  +AL +  A P  A+  C  SQL+ C +A   G  PS  CC  LR  Q C+C+Y  
Sbjct: 10 VTALMLALVVLAAAPGGARAACQASQLAVCASAILSGAKPSGECCGNLRAQQGCFCQYAK 69

Query: 74 DPNLRSFALIKIHQHKSSLLTC 94
          DP    +  I+    + +L +C
Sbjct: 70 DPTYGQY--IRSPHARDTLTSC 89

[Close]

BLAST of CsGy4G009910 vs. TrEMBL
Match: tr|A0A0A0KZL4|A0A0A0KZL4_CUCSA (Putative lipid transfer protein family protein OS=Cucumis sativus OX=3659 GN=Csa_4G146240 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 4.1e-36
Identity = 76/78 (97.44%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1  MKNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMTPSQTCCNKLR 60
          MKNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMTPSQTCCNKLR
Sbjct: 1  MKNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMTPSQTCCNKLR 60

Query: 61 EAQPCYCEYLNDPNLRSF 79
          EAQPCYCEY+NDP+LRSF
Sbjct: 61 EAQPCYCEYINDPDLRSF 78

[Close]

BLAST of CsGy4G009910 vs. TrEMBL
Match: tr|A0A1S3BAC3|A0A1S3BAC3_CUCME (non-specific lipid-transfer protein 2P-like OS=Cucumis melo OX=3656 GN=LOC103487519 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.1e-24
Identity = 59/79 (74.68%), Postives = 63/79 (79.75%), Query Frame = 0


Query: 1  MKNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAF-FGMTPSQTCCNKL 60
          MKNFPIT+VVCIFVVATTVALLNG PPV AQ  CD SQLSSC  AF FG  P+Q CC KL
Sbjct: 1  MKNFPITLVVCIFVVATTVALLNGPPPVAAQTVCDASQLSSCAPAFLFGGNPNQECCTKL 60

Query: 61 REAQPCYCEYLNDPNLRSF 79
          R  QPCYCEY  DPNL++F
Sbjct: 61 RAEQPCYCEYFGDPNLQNF 79

[Close]

BLAST of CsGy4G009910 vs. TrEMBL
Match: tr|A0A1U8J2U1|A0A1U8J2U1_GOSHI (non-specific lipid-transfer protein 2-like OS=Gossypium hirsutum OX=3635 GN=LOC107903119 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.1e-08
Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = 0


Query: 30 AQVECDPSQLSSCTAAFFGMT-PSQTCCNKLREAQPCYCEYLNDPNLRSFA 80
          A V C+P +LS C AA    T PS+TCC++LRE  PC+C YLNDP+LR FA
Sbjct: 36 AAVTCNPIELSPCLAAVMSSTPPSETCCSRLREQTPCFCGYLNDPSLRQFA 86

[Close]

BLAST of CsGy4G009910 vs. TrEMBL
Match: tr|A0A0D2TWU4|A0A0D2TWU4_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G286700 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.1e-08
Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = 0


Query: 30 AQVECDPSQLSSCTAAFFGMT-PSQTCCNKLREAQPCYCEYLNDPNLRSFA 80
          A V C+P +LS C AA    T PS+TCC++LRE  PC+C YLNDP+LR FA
Sbjct: 17 AAVTCNPIELSPCLAAVMSSTPPSETCCSRLREQTPCFCGYLNDPSLRQFA 67

[Close]

BLAST of CsGy4G009910 vs. TrEMBL
Match: tr|A0A2P5SHF3|A0A2P5SHF3_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD04500 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.1e-08
Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = 0


Query: 30 AQVECDPSQLSSCTAAFFGMT-PSQTCCNKLREAQPCYCEYLNDPNLRSFA 80
          A V C+P +LS C AA    T PS+TCC++LRE  PC+C YLNDP+LR FA
Sbjct: 36 AAVTCNPIELSPCLAAVMSSTPPSETCCSRLREQTPCFCGYLNDPSLRQFA 86

The following BLAST results are available for this feature:

BLAST of CsGy4G009910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653423.1	6.2e-36	97.44	PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis sativus] >KGN5381...	[more]
XP_008444079.1	3.2e-24	74.68	PREDICTED: non-specific lipid-transfer protein 2P-like [Cucumis melo]	[more]
XP_022955426.1	1.3e-09	51.90	non-specific lipid-transfer protein 2-like [Cucurbita moschata]	[more]
KJB60036.1	3.2e-08	58.82	hypothetical protein B456_009G286700 [Gossypium raimondii]	[more]
XP_016684656.1	3.2e-08	58.82	PREDICTED: non-specific lipid-transfer protein 2-like [Gossypium hirsutum] >PPD9...	[more]

BLAST of CsGy4G009910 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G38170.1	1.0e-08	37.36	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G48750.1	2.3e-08	42.25	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G73780.1	1.9e-07	40.00	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G38160.1	8.1e-06	37.18	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G07747.1	2.6e-04	35.71	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

BLAST of CsGy4G009910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P86809\|NLTP2_APIGA	4.1e-07	54.35	Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=27811...	[more]
sp\|P82353\|NLTP2_PRUAR	4.6e-06	50.00	Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1	[more]
sp\|Q43681\|NLTP_VIGUN	1.7e-05	50.00	Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 ...	[more]
sp\|P82901\|NLT2P_WHEAT	6.6e-05	37.70	Non-specific lipid-transfer protein 2P OS=Triticum aestivum OX=4565 PE=1 SV=1	[more]
sp\|P82900\|NLT2G_WHEAT	1.9e-04	35.37	Non-specific lipid-transfer protein 2G OS=Triticum aestivum OX=4565 PE=1 SV=2	[more]

BLAST of CsGy4G009910 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KZL4\|A0A0A0KZL4_CUCSA	4.1e-36	97.44	Putative lipid transfer protein family protein OS=Cucumis sativus OX=3659 GN=Csa...	[more]
tr\|A0A1S3BAC3\|A0A1S3BAC3_CUCME	2.1e-24	74.68	non-specific lipid-transfer protein 2P-like OS=Cucumis melo OX=3656 GN=LOC103487...	[more]
tr\|A0A1U8J2U1\|A0A1U8J2U1_GOSHI	2.1e-08	58.82	non-specific lipid-transfer protein 2-like OS=Gossypium hirsutum OX=3635 GN=LOC1...	[more]
tr\|A0A0D2TWU4\|A0A0D2TWU4_GOSRA	2.1e-08	58.82	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G286700 PE=4 ...	[more]
tr\|A0A2P5SHF3\|A0A2P5SHF3_GOSBA	2.1e-08	58.82	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD04500 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006869	lipid transport

Vocabulary: **INTERPRO**
Term	Definition
IPR036312	Bifun_inhib/LTP/seed_sf
IPR033872	nsLTP2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G009910.1	CsGy4G009910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 32..99 e-value: 6.0E-13 score: 50.9
None	No IPR available	PANTHER	PTHR33214:SF19	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN-LIKE PROTEIN	coord: 8..78
IPR033872	Non-specific lipid-transfer protein type 2	PANTHER	PTHR33214	FAMILY NOT NAMED	coord: 8..78
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 33..82

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy4G009910	Cla010773	Watermelon (97103) v1	cgybwmB285
CsGy4G009910	Csa4G146240	Cucumber (Chinese Long) v2	cgybcuB165
CsGy4G009910	MELO3C010393	Melon (DHL92) v3.5.1	cgybmeB272
CsGy4G009910	ClCG07G016400	Watermelon (Charleston Gray)	cgybwcgB306
CsGy4G009910	CSPI04G10310	Wild cucumber (PI 183967)	cgybcpiB168
CsGy4G009910	CmaCh14G011740	Cucurbita maxima (Rimu)	cgybcmaB487
CsGy4G009910	CmoCh14G011970	Cucurbita moschata (Rifu)	cgybcmoB457
CsGy4G009910	Lsi07G009280	Bottle gourd (USVL1VR-Ls)	cgyblsiB286
CsGy4G009910	Cp4.1LG03g15200	Cucurbita pepo (Zucchini)	cgybcpeB554
CsGy4G009910	MELO3C010393.2	Melon (DHL92) v3.6.1	cgybmedB269
CsGy4G009910	Cla97C07G143400	Watermelon (97103) v2	cgybwmbB308

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy4G009910	Cucumber (Chinese Long) v3	cgybcucB171
CsGy4G009910	Bottle gourd (USVL1VR-Ls)	cgyblsiB245