CsGy4G009780 (gene) Cucumber (Gy14) v2

Overview
NameCsGy4G009780
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr4 : 8173474 .. 8175158 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCAACACTGACAATGCCATCAATGGCGTTTCTTATTACAATTCTTCTGCTGAACCCAATCATTTCCAATGCCGGCATGAACGATACTGAATCCAAGTGGTGCGACAGCACCGGCCTGGAAAACTGTCTGGTCGGCGACCTCAACTCCCATTCCGAGTTTCTGATGTTGACAGAGAGTAGCGGGATGCTGGTGGATCAGTTTCTGACATTTCAAACTCCCAAAGCCAATGATGCTAACAAAGAATCAGTTCCGGATTGCAGTCGGCCGCCACGCTATGATAGCTGTCTCGGCAGCAAAAGAAGTATCCCCAATCCTGAACCCTGCAGCACCCTAAATCGTGTCAATCCATGTTAGATAGATAGAATAGAAGTTGTGTGTTGTGATTTACAATAACTGATATTGTTACGTGGAAGTTGAGTGTGAGATGAAGGAAGAAATATCAATAATTTGTTCATGGTATCCTCTTATTTTAATGTTTGATAATCAAATAGTATTCTTGTATCCTAATTCCTCGCAATTTCTTGAAACTTGAATCCACGCTCCTGATTAGGGATCCCGATTGTTATGTGTGTGTATATATATTGGCTTTTTAACTTGTGTTTAGGGTTGAAAATGACTTCGTATTGTAACGAATGACTTGTATTCCATGTTGAATGTTTTGAAATATTGGCTAAATAGTAGGAAATGTTATACTTTATATCAATAATAACTTAAGCTTTTAAAAGTTAAGAAAATAATAGTTAGAAATACTATTGTCCTTATTTTTTAATAAAAATTCTTAATGTTTTGTTTAAAAAATAATTTTGTTTGTATGTGATTACAAACAATTATTACTCATTTTAAATATCTTAAACCTTAACAATCTAACTCGCATAGAAGATGTTCAAAAACCTATGATTTAAAGTTCCGTGCTTAATGATATTTTGAAATGAGATATGGTAAAACAAATAAAACAAATCAAAGGTATGTCCAATCATATAATGAGTTTAGCTCAATGGCAACTCAATATAATTTTCTATTTAAAAGGTGGTAGGTTTGATGTCAATACTTCATTTATTCCAATGGAAACGTAATAGATCAAAGAGAACAGAAAAATGAACCTCATTTAATTACTTTTATTGTTATTTACTTGTATTTTGTATTTTGTACTAACACATGTGGTTCAAAGGCCACATCAGAATTTGTAAAGAAATACCGCAAATTGATTGACCAAATCCAGAGTGTTTAATCGAATTGCACATGAAAATAACACTGTATCATTATTGTTATAGCTACTTTTTTTTTTGATATGTTATAGTTGAAAAATTATCAATCTGGACAACTTTACTATTACCTAGCAGTTAATTAACAAAATTCATAATTTCTAGTAAACGCGATTAAAAGTAATCCGATTACATTTGTGATTCAAACTCGTTATAATTCATTCACCAATAAAATTTAGAAAATTGTTAGAAATGATTTCATATTTTGTCTTGTAATAATTGTTGAAACATCTTTTCTTGATCCATCCTGAACAAGACTGACAAATGAAATTTCACTAAAATATTAAAATTTTTCAACTTACAATTGTTTTGAGTTTTCCGTCTCCATCTCGACTTTCTACCATTTTTTAAATCTTCCCAAATCTTAACTAATTTTTTTATTTTTCAAAATTTTTAGATTACACAGTCAAATATTAA

mRNA sequence

ATGGCTGCAACACTGACAATGCCATCAATGGCGTTTCTTATTACAATTCTTCTGCTGAACCCAATCATTTCCAATGCCGGCATGAACGATACTGAATCCAAGTGGTGCGACAGCACCGGCCTGGAAAACTGTCTGGTCGGCGACCTCAACTCCCATTCCGAGTTTCTGATGTTGACAGAGAGTAGCGGGATGCTGGTGGATCAGTTTCTGACATTTCAAACTCCCAAAGCCAATGATGCTAACAAAGAATCAGTTCCGGATTGCAGTCGGCCGCCACGCTATGATAGCTGTCTCGGCAGCAAAAGAAATTACACAGTCAAATATTAA

Coding sequence (CDS)

ATGGCTGCAACACTGACAATGCCATCAATGGCGTTTCTTATTACAATTCTTCTGCTGAACCCAATCATTTCCAATGCCGGCATGAACGATACTGAATCCAAGTGGTGCGACAGCACCGGCCTGGAAAACTGTCTGGTCGGCGACCTCAACTCCCATTCCGAGTTTCTGATGTTGACAGAGAGTAGCGGGATGCTGGTGGATCAGTTTCTGACATTTCAAACTCCCAAAGCCAATGATGCTAACAAAGAATCAGTTCCGGATTGCAGTCGGCCGCCACGCTATGATAGCTGTCTCGGCAGCAAAAGAAATTACACAGTCAAATATTAA

Protein sequence

MAATLTMPSMAFLITILLLNPIISNAGMNDTESKWCDSTGLENCLVGDLNSHSEFLMLTESSGMLVDQFLTFQTPKANDANKESVPDCSRPPRYDSCLGSKRNYTVKY
Homology
[Close]
BLAST of CsGy4G009780 vs. NCBI nr
Match: KGN53798.1 (hypothetical protein Csa_4G130630 [Cucumis sativus])

HSP 1 Score: 207.2 bits (526), Expect = 2.8e-50
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MAATLTMPSMAFLITILLLNPIISNAGMNDTESKWCDSTGLENCLVGDLNSHSEFLMLTE 60
           MAATLTMPSMAFLITILLLNPIISNAGMNDTESKWCDSTGLENCLVGDLNSHSEFLMLTE
Sbjct: 9   MAATLTMPSMAFLITILLLNPIISNAGMNDTESKWCDSTGLENCLVGDLNSHSEFLMLTE 68

Query: 61  SSGMLVDQFLTFQTPKANDANKESVPDCSRPPRYDSCLGSKRN 104
           SSGMLVDQFLTFQTPKANDANKESVPDCSRPPRYDSCLGSKR+
Sbjct: 69  SSGMLVDQFLTFQTPKANDANKESVPDCSRPPRYDSCLGSKRS 111

[Close]
BLAST of CsGy4G009780 vs. NCBI nr
Match: KGN53800.1 (hypothetical protein Csa_4G131140 [Cucumis sativus])

HSP 1 Score: 104.8 bits (260), Expect = 1.9e-19
Identity = 56/102 (54.90%), Postives = 69/102 (67.65%), Query Frame = 0 

Query: 1   MAATLTMPSMAFLITILLLNPIISNAGMNDTESKWCDSTGLENCLVGDLNSHSEFLMLTE 60
           MA T ++P+MA LI  LL NP   N  +N+T S+WC   G ENCLVGD +  SEFLM TE
Sbjct: 1   MATTFSIPTMAILILTLLFNPTRCNTTVNETTSEWC--YGSENCLVGDESLDSEFLMETE 60

Query: 61  SSGMLVDQFLTFQTPKANDANKESVPDCSRPPRYDSCLGSKR 103
           +S ML+D F   QTP   D N++SV +C RPPRYDSC G +R
Sbjct: 61  TSRMLLD-FQNLQTPGTIDPNRQSVAECGRPPRYDSCTGEER 99

[Close]
BLAST of CsGy4G009780 vs. NCBI nr
Match: XP_022998105.1 (uncharacterized protein LOC111492854 [Cucurbita maxima])

HSP 1 Score: 71.6 bits (174), Expect = 1.8e-09
Identity = 48/103 (46.60%), Postives = 57/103 (55.34%), Query Frame = 0 

Query: 1   MAATLTMPSMAFLITILLLNPIISNAGMNDTESKWCDSTGLENCLVGDLNSHSEFLMLTE 60
           MAA   M   A  I ILLLNP  S+A +   +    D++     L+GD +  SEFLM + 
Sbjct: 1   MAAAAVMIPAAMAIMILLLNPTSSDA-LTTFKPLNNDTSAAGKYLIGDQDIDSEFLMESH 60

Query: 61  SSGMLVDQFLTFQTPKANDANKESVPDCSRPPRYDSCLGSKRN 104
            S +L      FQT K NDANK S   C RPPRYDSCLG K N
Sbjct: 61  ISRILAGS-QDFQTSKTNDANKASGGGCERPPRYDSCLGQKSN 101

[Close]
BLAST of CsGy4G009780 vs. NCBI nr
Match: XP_022948338.1 (uncharacterized protein LOC111452044 [Cucurbita moschata])

HSP 1 Score: 71.2 bits (173), Expect = 2.4e-09
Identity = 47/103 (45.63%), Postives = 57/103 (55.34%), Query Frame = 0 

Query: 1   MAATLTMPSMAFLITILLLNPIISNAGMNDTESKWCDSTGLENCLVGDLNSHSEFLMLTE 60
           MAA   +   A  I ILLLNP  S+A +   +    D++     L+GD +  SEFLM + 
Sbjct: 1   MAAAAVIIPAAMAIMILLLNPTTSDA-LTSFKPLNNDTSAAGKYLIGDQDLDSEFLMESH 60

Query: 61  SSGMLVDQFLTFQTPKANDANKESVPDCSRPPRYDSCLGSKRN 104
            S +L      FQT K NDANK S   C RPPRYDSCLG K N
Sbjct: 61  ISRILAGS-QNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSN 101

[Close]
BLAST of CsGy4G009780 vs. NCBI nr
Match: XP_023523220.1 (uncharacterized protein LOC111787479 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 70.5 bits (171), Expect = 4.0e-09
Identity = 47/103 (45.63%), Postives = 56/103 (54.37%), Query Frame = 0 

Query: 1   MAATLTMPSMAFLITILLLNPIISNAGMNDTESKWCDSTGLENCLVGDLNSHSEFLMLTE 60
           MA    M   A  I ILLLNPI S+A +   +    D++     L+GD +  SEFLM + 
Sbjct: 1   MATAAAMIPAAMAIMILLLNPINSDA-LTSFKPLNNDTSAAGKYLIGDQDIDSEFLMESH 60

Query: 61  SSGMLVDQFLTFQTPKANDANKESVPDCSRPPRYDSCLGSKRN 104
            S +L      FQT   NDANK S   C RPPRYDSCLG K N
Sbjct: 61  ISRILAGS-QNFQTSNTNDANKASGGGCGRPPRYDSCLGQKSN 101

[Close]
BLAST of CsGy4G009780 vs. TrEMBL
Match: tr|A0A0A0KW62|A0A0A0KW62_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G130630 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.8e-50
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MAATLTMPSMAFLITILLLNPIISNAGMNDTESKWCDSTGLENCLVGDLNSHSEFLMLTE 60
           MAATLTMPSMAFLITILLLNPIISNAGMNDTESKWCDSTGLENCLVGDLNSHSEFLMLTE
Sbjct: 9   MAATLTMPSMAFLITILLLNPIISNAGMNDTESKWCDSTGLENCLVGDLNSHSEFLMLTE 68

Query: 61  SSGMLVDQFLTFQTPKANDANKESVPDCSRPPRYDSCLGSKRN 104
           SSGMLVDQFLTFQTPKANDANKESVPDCSRPPRYDSCLGSKR+
Sbjct: 69  SSGMLVDQFLTFQTPKANDANKESVPDCSRPPRYDSCLGSKRS 111

[Close]
BLAST of CsGy4G009780 vs. TrEMBL
Match: tr|A0A0A0KVZ2|A0A0A0KVZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G131140 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-19
Identity = 56/102 (54.90%), Postives = 69/102 (67.65%), Query Frame = 0 

Query: 1   MAATLTMPSMAFLITILLLNPIISNAGMNDTESKWCDSTGLENCLVGDLNSHSEFLMLTE 60
           MA T ++P+MA LI  LL NP   N  +N+T S+WC   G ENCLVGD +  SEFLM TE
Sbjct: 1   MATTFSIPTMAILILTLLFNPTRCNTTVNETTSEWC--YGSENCLVGDESLDSEFLMETE 60

Query: 61  SSGMLVDQFLTFQTPKANDANKESVPDCSRPPRYDSCLGSKR 103
           +S ML+D F   QTP   D N++SV +C RPPRYDSC G +R
Sbjct: 61  TSRMLLD-FQNLQTPGTIDPNRQSVAECGRPPRYDSCTGEER 99

[Close]
BLAST of CsGy4G009780 vs. TrEMBL
Match: tr|A0A0A0LCI8|A0A0A0LCI8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298050 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.5e-07
Identity = 44/108 (40.74%), Postives = 63/108 (58.33%), Query Frame = 0 

Query: 3   ATLTMPSMAFLITILLLNPIISNAGMNDT-ESKWCDSTGLENC-LVGDLNSHSEFLMLTE 62
           A L+ PS+  +I +LLL P  S   +NDT  S  C+S+  + C LV D     EF+M +E
Sbjct: 2   AALSTPSIGTIILLLLLIP--SGFTVNDTAASASCNSSHSKKCHLVRDDVGDYEFMMESE 61

Query: 63  SSGMLVDQFLTFQTPKANDANKESV-PDCSRPPRYDSCLGSKRNYTVK 108
              ML   +  +++P    ANK+ V  DC RPPRY+SCLG KR+  ++
Sbjct: 62  MGWMLSINYDKYKSPPTRIANKQVVKDDCGRPPRYESCLGRKRDTLIQ 107

[Close]
BLAST of CsGy4G009780 vs. TrEMBL
Match: tr|A0A0A0L711|A0A0A0L711_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298570 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.4e-04
Identity = 35/102 (34.31%), Postives = 52/102 (50.98%), Query Frame = 0 

Query: 2   AATLTMPSMAFLITILLLNPIISNAGMNDTESKWCDSTGLENCLVGDLNSHSEFLMLTES 61
           A  L +P+   ++ ++L+      A  +        S GL   +V + +  S F+M +  
Sbjct: 4   APALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVMESHI 63

Query: 62  SGMLVDQFLTFQTPKANDANKESVPDCSRPPRYDSCLGSKRN 104
           S ML D    F+T   N+A + S  +C RPPRYDSCLG KRN
Sbjct: 64  SRMLADS-QDFETSSTNNATQVSAGECDRPPRYDSCLGVKRN 104

[Close]
BLAST of CsGy4G009780 vs. TrEMBL
Match: tr|A0A0A0L9X5|A0A0A0L9X5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298070 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.7e-04
Identity = 36/102 (35.29%), Postives = 61/102 (59.80%), Query Frame = 0 

Query: 2   AATLTMPSMAFLITILLLNPIISNAGMNDTESKWCDSTGLENCLVGDLNSHSEFLMLTES 61
           AATL++ +   ++T+LL+   +       ++  +  S+ L   L+GD++  ++FLM +  
Sbjct: 3   AATLSIRTTLAIVTLLLV--AVGCDAFIASKPVFNLSSDLGKRLIGDID--TDFLMESHV 62

Query: 62  SGMLVDQFLTFQTPKANDANKESVPDCSRPPRYDSCLGSKRN 104
           S +L +  L F+T +  +AN  SV +C RPPRYDSCLG  R+
Sbjct: 63  SRILAE--LRFETMRTPNANSASVVNCERPPRYDSCLGEARD 98

The following BLAST results are available for this feature:
BLAST of CsGy4G009780 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53798.12.8e-5099.03hypothetical protein Csa_4G130630 [Cucumis sativus][more]
KGN53800.11.9e-1954.90hypothetical protein Csa_4G131140 [Cucumis sativus][more]
XP_022998105.11.8e-0946.60uncharacterized protein LOC111492854 [Cucurbita maxima][more]
XP_022948338.12.4e-0945.63uncharacterized protein LOC111452044 [Cucurbita moschata][more]
XP_023523220.14.0e-0945.63uncharacterized protein LOC111787479 [Cucurbita pepo subsp. pepo][more]
BLAST of CsGy4G009780 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy4G009780 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy4G009780 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KW62|A0A0A0KW62_CUCSA1.8e-5099.03Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G130630 PE=4 SV=1[more]
tr|A0A0A0KVZ2|A0A0A0KVZ2_CUCSA1.3e-1954.90Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G131140 PE=4 SV=1[more]
tr|A0A0A0LCI8|A0A0A0LCI8_CUCSA2.5e-0740.74Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298050 PE=4 SV=1[more]
tr|A0A0A0L711|A0A0A0L711_CUCSA4.4e-0434.31Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298570 PE=4 SV=1[more]
tr|A0A0A0L9X5|A0A0A0L9X5_CUCSA5.7e-0435.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298070 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G009780.1CsGy4G009780.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy4G009780Cla010759Watermelon (97103) v1cgybwmB285
CsGy4G009780Csa4G130630Cucumber (Chinese Long) v2cgybcuB165
CsGy4G009780CSPI04G10150Wild cucumber (PI 183967)cgybcpiB168
CsGy4G009780CmaCh01G004130Cucurbita maxima (Rimu)cgybcmaB517
CsGy4G009780CmoCh01G004420Cucurbita moschata (Rifu)cgybcmoB488
CsGy4G009780Cp4.1LG02g13780Cucurbita pepo (Zucchini)cgybcpeB542
CsGy4G009780CsaV3_4G010280Cucumber (Chinese Long) v3cgybcucB171
CsGy4G009780Bhi01G001667Wax gourdcgybwgoB358
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy4G009780Cucumber (Gy14) v2cgybcgybB024
CsGy4G009780Cucurbita maxima (Rimu)cgybcmaB483
CsGy4G009780Cucurbita maxima (Rimu)cgybcmaB487
CsGy4G009780Cucurbita moschata (Rifu)cgybcmoB443
CsGy4G009780Cucurbita moschata (Rifu)cgybcmoB453
CsGy4G009780Cucurbita moschata (Rifu)cgybcmoB457
CsGy4G009780Cucurbita pepo (Zucchini)cgybcpeB500
CsGy4G009780Cucurbita pepo (Zucchini)cgybcpeB538
CsGy4G009780Cucurbita pepo (Zucchini)cgybcpeB554
CsGy4G009780Cucumber (Chinese Long) v2cgybcuB157
CsGy4G009780Bottle gourd (USVL1VR-Ls)cgyblsiB254
CsGy4G009780Bottle gourd (USVL1VR-Ls)cgyblsiB286
CsGy4G009780Melon (DHL92) v3.5.1cgybmeB234
CsGy4G009780Melon (DHL92) v3.5.1cgybmeB241
CsGy4G009780Melon (DHL92) v3.5.1cgybmeB272
CsGy4G009780Melon (DHL92) v3.6.1cgybmedB235
CsGy4G009780Melon (DHL92) v3.6.1cgybmedB240
CsGy4G009780Melon (DHL92) v3.6.1cgybmedB269
CsGy4G009780Watermelon (Charleston Gray)cgybwcgB277
CsGy4G009780Watermelon (97103) v1cgybwmB310
CsGy4G009780Watermelon (97103) v1cgybwmB334
CsGy4G009780Wild cucumber (PI 183967)cgybcpiB160
CsGy4G009780Cucumber (Chinese Long) v3cgybcucB164
CsGy4G009780Watermelon (97103) v2cgybwmbB279
CsGy4G009780Watermelon (97103) v2cgybwmbB296
CsGy4G009780Wax gourdcgybwgoB356
CsGy4G009780Wax gourdcgybwgoB394
CsGy4G009780Wax gourdcgybwgoB405