CSPI04G10150 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G10150
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr4 : 8157389 .. 8158130 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACAATTAAGAGAAAAAATTAGTGATCTATCTTTCTTGTTCTTTTGCAATTCCTCTACCTTCCAAAAGTAAACAAATAGATCCACACCCAACTCTTCCCTCTTTCTAAATTATTGTTCACACACGGGACTCTCCTCAAACACCATGGCTACAACATTTTCAATACCAACCATGGCAATCCTCATTCTGACTCTACTGTTCAACCCAACCCGTTGCAACACAACCGTCAATGAGACAACATCGGAGTGGTGCTACGGGTCCGAGAATTGCCTCGTCGGCGATGAGAGCTTGGATTCGGAGTTTTTAATGGAGACAGAGACCAGCCGGATGCTGCTGGACTTTCAGAATTTACAAACTCCAGGCACTATAGACCCTAACAGACAATCGGTTGCAGAATGTGGGCGGCCGCCACGGTACGACAGCTGCACTGGAGAAGAAAGGCAGATCCCCAACCCTGAAAATTGTGACGTCCGAAATCGCGCGAATCCGTGTTAGTCCTCCTCATCTTTTAGCTCCGATCGGAAGAATTGAAGCCAATGTATCTGTTTGTCGTTATTTGAATAAATGAATTGCAATATCTGTTTTAATCACAATCAGCTGTATAATCTTAATTACTCTCATTAGTTCATAATCATTTCAACCACTTGTTTAGTTAAGCTTTGATTCGAATTTTGTTAACATAATTTTCAAAATCTACTTTTACATCGAGTTGTGATATTACAAAGATAAAATATGTATTGAGT

mRNA sequence

ATGGCTACAACATTTTCAATACCAACCATGGCAATCCTCATTCTGACTCTACTGTTCAACCCAACCCGTTGCAACACAACCGTCAATGAGACAACATCGGAGTGGTGCTACGGGTCCGAGAATTGCCTCGTCGGCGATGAGAGCTTGGATTCGGAGTTTTTAATGGAGACAGAGACCAGCCGGATGCTGCTGGACTTTCAGAATTTACAAACTCCAGGCACTATAGACCCTAACAGACAATCGGTTGCAGAATGTGGGCGGCCGCCACGGTACGACAGCTGCACTGGAGAAGAAAGGCAGATCCCCAACCCTGAAAATTGTGACGTCCGAAATCGCGCGAATCCGTGTTAG

Coding sequence (CDS)

ATGGCTACAACATTTTCAATACCAACCATGGCAATCCTCATTCTGACTCTACTGTTCAACCCAACCCGTTGCAACACAACCGTCAATGAGACAACATCGGAGTGGTGCTACGGGTCCGAGAATTGCCTCGTCGGCGATGAGAGCTTGGATTCGGAGTTTTTAATGGAGACAGAGACCAGCCGGATGCTGCTGGACTTTCAGAATTTACAAACTCCAGGCACTATAGACCCTAACAGACAATCGGTTGCAGAATGTGGGCGGCCGCCACGGTACGACAGCTGCACTGGAGAAGAAAGGCAGATCCCCAACCCTGAAAATTGTGACGTCCGAAATCGCGCGAATCCGTGTTAG
Homology
[Close]
BLAST of CSPI04G10150 vs. TrEMBL
Match: A0A0A0KVZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G131140 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 3.9e-61
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1 

Query: 1   MATTFSIPTMAILILTLLFNPTRCNTTVNETTSEWCYGSENCLVGDESLDSEFLMETETS 60
           MATTFSIPTMAILILTLLFNPTRCNTTVNETTSEWCYGSENCLVGDESLDSEFLMETETS
Sbjct: 1   MATTFSIPTMAILILTLLFNPTRCNTTVNETTSEWCYGSENCLVGDESLDSEFLMETETS 60

Query: 61  RMLLDFQNLQTPGTIDPNRQSVAECGRPPRYDSCTGEERQIPNPENCDVRNRANPC 117
           RMLLDFQNLQTPGTIDPNRQSVAECGRPPRYDSCTGEERQIPNPENCDVRNRANPC
Sbjct: 61  RMLLDFQNLQTPGTIDPNRQSVAECGRPPRYDSCTGEERQIPNPENCDVRNRANPC 116

[Close]
BLAST of CSPI04G10150 vs. TrEMBL
Match: A0A0A0KW62_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G130630 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 4.8e-27
Identity = 67/119 (56.30%), Postives = 80/119 (67.23%), Query Frame = 1 

Query: 1   MATTFSIPTMAILILTLLFNPTRCNTTVNETTSEWC--YGSENCLVGDESLDSEFLMETE 60
           MA T ++P+MA LI  LL NP   N  +N+T S+WC   G ENCLVGD +  SEFLM TE
Sbjct: 9   MAATLTMPSMAFLITILLLNPIISNAGMNDTESKWCDSTGLENCLVGDLNSHSEFLMLTE 68

Query: 61  TSRMLLD-FQNLQTPGTIDPNRQSVAECGRPPRYDSCTGEERQIPNPENCDVRNRANPC 117
           +S ML+D F   QTP   D N++SV +C RPPRYDSC G +R IPNPE C   NR NPC
Sbjct: 69  SSGMLVDQFLTFQTPKANDANKESVPDCSRPPRYDSCLGSKRSIPNPEPCSTLNRVNPC 127

[Close]
BLAST of CSPI04G10150 vs. TrEMBL
Match: A0A0A0LCJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298580 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 7.2e-15
Identity = 47/117 (40.17%), Postives = 65/117 (55.56%), Query Frame = 1 

Query: 2   ATTFSIPTMAILILTLLFNPTRCN--TTVNETTSEWCYGSENCLVGDESLDSEFLMETET 61
           A+   IP   + ++ LL  P+ C+  TT     S         ++G+E ++ EFLME+  
Sbjct: 3   ASALMIPAAVVTMILLLHIPSSCDALTTFQPLLSNHSSYGGKLMMGEEDMELEFLMESHI 62

Query: 62  SRMLLDFQNLQTPGTIDPNRQSVAECGRPPRYDSCTGEERQIPNPENCDVRNRANPC 117
           SR+L   +N QT  T + N+ S   C RPPRYDSC G++R  P P NC   NRANPC
Sbjct: 63  SRILASSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNNPPPPNCSPYNRANPC 119

[Close]
BLAST of CSPI04G10150 vs. TrEMBL
Match: A0A0A0L711_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298570 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.0e-12
Identity = 45/118 (38.14%), Postives = 62/118 (52.54%), Query Frame = 1 

Query: 2   ATTFSIPTMAILILTLLFNPTRCN---TTVNETTSEWCYGSENCLVGDESLDSEFLMETE 61
           A    IP    ++L +L  PT C    T+     +    G    +V +E + S F+ME+ 
Sbjct: 4   APALMIPAAMAMMLMMLI-PTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVMESH 63

Query: 62  TSRMLLDFQNLQTPGTIDPNRQSVAECGRPPRYDSCTGEERQIPNPENCDVRNRANPC 117
            SRML D Q+ +T  T +  + S  EC RPPRYDSC G +R  P P+NC   NR +PC
Sbjct: 64  ISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 120

[Close]
BLAST of CSPI04G10150 vs. TrEMBL
Match: A0A0A0L9X5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298070 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.2e-11
Identity = 51/118 (43.22%), Postives = 66/118 (55.93%), Query Frame = 1 

Query: 2   ATTFSIPTMAILILTLLFNPTRCNTTV-NETTSEWCYGSENCLVGDESLDSEFLMETETS 61
           A T SI T  + I+TLL     C+  + ++            L+GD  +D++FLME+  S
Sbjct: 3   AATLSIRT-TLAIVTLLLVAVGCDAFIASKPVFNLSSDLGKRLIGD--IDTDFLMESHVS 62

Query: 62  RML--LDFQNLQTPGTIDPNRQSVAECGRPPRYDSCTGEERQIPNPENCDVRNRANPC 117
           R+L  L F+ ++TP     N  SV  C RPPRYDSC GE R  P  ENCD  NRANPC
Sbjct: 63  RILAELRFETMRTPNA---NSASVVNCERPPRYDSCLGEARDNPPSENCDPYNRANPC 114

[Close]
BLAST of CSPI04G10150 vs. NCBI nr
Match: gi|700198642|gb|KGN53800.1| (hypothetical protein Csa_4G131140 [Cucumis sativus])

HSP 1 Score: 241.9 bits (616), Expect = 5.6e-61
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1 

Query: 1   MATTFSIPTMAILILTLLFNPTRCNTTVNETTSEWCYGSENCLVGDESLDSEFLMETETS 60
           MATTFSIPTMAILILTLLFNPTRCNTTVNETTSEWCYGSENCLVGDESLDSEFLMETETS
Sbjct: 1   MATTFSIPTMAILILTLLFNPTRCNTTVNETTSEWCYGSENCLVGDESLDSEFLMETETS 60

Query: 61  RMLLDFQNLQTPGTIDPNRQSVAECGRPPRYDSCTGEERQIPNPENCDVRNRANPC 117
           RMLLDFQNLQTPGTIDPNRQSVAECGRPPRYDSCTGEERQIPNPENCDVRNRANPC
Sbjct: 61  RMLLDFQNLQTPGTIDPNRQSVAECGRPPRYDSCTGEERQIPNPENCDVRNRANPC 116

[Close]
BLAST of CSPI04G10150 vs. NCBI nr
Match: gi|700198640|gb|KGN53798.1| (hypothetical protein Csa_4G130630 [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 6.9e-27
Identity = 67/119 (56.30%), Postives = 80/119 (67.23%), Query Frame = 1 

Query: 1   MATTFSIPTMAILILTLLFNPTRCNTTVNETTSEWC--YGSENCLVGDESLDSEFLMETE 60
           MA T ++P+MA LI  LL NP   N  +N+T S+WC   G ENCLVGD +  SEFLM TE
Sbjct: 9   MAATLTMPSMAFLITILLLNPIISNAGMNDTESKWCDSTGLENCLVGDLNSHSEFLMLTE 68

Query: 61  TSRMLLD-FQNLQTPGTIDPNRQSVAECGRPPRYDSCTGEERQIPNPENCDVRNRANPC 117
           +S ML+D F   QTP   D N++SV +C RPPRYDSC G +R IPNPE C   NR NPC
Sbjct: 69  SSGMLVDQFLTFQTPKANDANKESVPDCSRPPRYDSCLGSKRSIPNPEPCSTLNRVNPC 127

[Close]
BLAST of CSPI04G10150 vs. NCBI nr
Match: gi|700202648|gb|KGN57781.1| (hypothetical protein Csa_3G298580 [Cucumis sativus])

HSP 1 Score: 88.2 bits (217), Expect = 1.0e-14
Identity = 47/117 (40.17%), Postives = 65/117 (55.56%), Query Frame = 1 

Query: 2   ATTFSIPTMAILILTLLFNPTRCN--TTVNETTSEWCYGSENCLVGDESLDSEFLMETET 61
           A+   IP   + ++ LL  P+ C+  TT     S         ++G+E ++ EFLME+  
Sbjct: 3   ASALMIPAAVVTMILLLHIPSSCDALTTFQPLLSNHSSYGGKLMMGEEDMELEFLMESHI 62

Query: 62  SRMLLDFQNLQTPGTIDPNRQSVAECGRPPRYDSCTGEERQIPNPENCDVRNRANPC 117
           SR+L   +N QT  T + N+ S   C RPPRYDSC G++R  P P NC   NRANPC
Sbjct: 63  SRILASSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNNPPPPNCSPYNRANPC 119

[Close]
BLAST of CSPI04G10150 vs. NCBI nr
Match: gi|778680757|ref|XP_011651393.1| (PREDICTED: uncharacterized protein LOC105434882 [Cucumis sativus])

HSP 1 Score: 80.1 bits (196), Expect = 2.8e-12
Identity = 45/118 (38.14%), Postives = 62/118 (52.54%), Query Frame = 1 

Query: 2   ATTFSIPTMAILILTLLFNPTRCN---TTVNETTSEWCYGSENCLVGDESLDSEFLMETE 61
           A    IP    ++L +L  PT C    T+     +    G    +V +E + S F+ME+ 
Sbjct: 4   APALMIPAAMAMMLMMLI-PTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVMESH 63

Query: 62  TSRMLLDFQNLQTPGTIDPNRQSVAECGRPPRYDSCTGEERQIPNPENCDVRNRANPC 117
            SRML D Q+ +T  T +  + S  EC RPPRYDSC G +R  P P+NC   NR +PC
Sbjct: 64  ISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 120

[Close]
BLAST of CSPI04G10150 vs. NCBI nr
Match: gi|700202646|gb|KGN57779.1| (hypothetical protein Csa_3G298070 [Cucumis sativus])

HSP 1 Score: 76.6 bits (187), Expect = 3.1e-11
Identity = 51/118 (43.22%), Postives = 66/118 (55.93%), Query Frame = 1 

Query: 2   ATTFSIPTMAILILTLLFNPTRCNTTV-NETTSEWCYGSENCLVGDESLDSEFLMETETS 61
           A T SI T  + I+TLL     C+  + ++            L+GD  +D++FLME+  S
Sbjct: 3   AATLSIRT-TLAIVTLLLVAVGCDAFIASKPVFNLSSDLGKRLIGD--IDTDFLMESHVS 62

Query: 62  RML--LDFQNLQTPGTIDPNRQSVAECGRPPRYDSCTGEERQIPNPENCDVRNRANPC 117
           R+L  L F+ ++TP     N  SV  C RPPRYDSC GE R  P  ENCD  NRANPC
Sbjct: 63  RILAELRFETMRTPNA---NSASVVNCERPPRYDSCLGEARDNPPSENCDPYNRANPC 114

The following BLAST results are available for this feature:
BLAST of CSPI04G10150 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI04G10150 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVZ2_CUCSA3.9e-61100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G131140 PE=4 SV=1[more]
A0A0A0KW62_CUCSA4.8e-2756.30Uncharacterized protein OS=Cucumis sativus GN=Csa_4G130630 PE=4 SV=1[more]
A0A0A0LCJ4_CUCSA7.2e-1540.17Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298580 PE=4 SV=1[more]
A0A0A0L711_CUCSA2.0e-1238.14Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298570 PE=4 SV=1[more]
A0A0A0L9X5_CUCSA2.2e-1143.22Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298070 PE=4 SV=1[more]
BLAST of CSPI04G10150 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI04G10150 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198642|gb|KGN53800.1|5.6e-61100.00hypothetical protein Csa_4G131140 [Cucumis sativus][more]
gi|700198640|gb|KGN53798.1|6.9e-2756.30hypothetical protein Csa_4G130630 [Cucumis sativus][more]
gi|700202648|gb|KGN57781.1|1.0e-1440.17hypothetical protein Csa_3G298580 [Cucumis sativus][more]
gi|778680757|ref|XP_011651393.1|2.8e-1238.14PREDICTED: uncharacterized protein LOC105434882 [Cucumis sativus][more]
gi|700202646|gb|KGN57779.1|3.1e-1143.22hypothetical protein Csa_3G298070 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G10150.1CSPI04G10150.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI04G10150Cla010759Watermelon (97103) v1cpiwmB312
CSPI04G10150MELO3C010370Melon (DHL92) v3.5.1cpimeB313
CSPI04G10150ClCG07G016510Watermelon (Charleston Gray)cpiwcgB347
CSPI04G10150Lsi07G009400Bottle gourd (USVL1VR-Ls)cpilsiB312
CSPI04G10150MELO3C010370.2Melon (DHL92) v3.6.1cpimedB304
CSPI04G10150Cla97C07G143510Watermelon (97103) v2cpiwmbB337
CSPI04G10150Bhi01G001667Wax gourdcpiwgoB375
CSPI04G10150CmaCh01G004130Cucurbita maxima (Rimu)cmacpiB479
CSPI04G10150CmoCh01G004420Cucurbita moschata (Rifu)cmocpiB469
CSPI04G10150CsGy4G009780Cucumber (Gy14) v2cgybcpiB168
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI04G10150Melon (DHL92) v3.6.1cpimedB264
CSPI04G10150Melon (DHL92) v3.6.1cpimedB274
CSPI04G10150Cucumber (Gy14) v2cgybcpiB026
CSPI04G10150Cucumber (Chinese Long) v3cpicucB203
CSPI04G10150Cucumber (Chinese Long) v3cpicucB213
CSPI04G10150Watermelon (97103) v2cpiwmbB302
CSPI04G10150Watermelon (97103) v2cpiwmbB324
CSPI04G10150Wax gourdcpiwgoB371
CSPI04G10150Wax gourdcpiwgoB414
CSPI04G10150Wax gourdcpiwgoB430
CSPI04G10150Wild cucumber (PI 183967)cpicpiB025
CSPI04G10150Cucumber (Gy14) v1cgycpiB141
CSPI04G10150Cucurbita maxima (Rimu)cmacpiB265
CSPI04G10150Cucurbita moschata (Rifu)cmocpiB252
CSPI04G10150Cucumber (Chinese Long) v2cpicuB172
CSPI04G10150Cucumber (Chinese Long) v2cpicuB182
CSPI04G10150Melon (DHL92) v3.5.1cpimeB268
CSPI04G10150Melon (DHL92) v3.5.1cpimeB278
CSPI04G10150Watermelon (Charleston Gray)cpiwcgB311
CSPI04G10150Watermelon (Charleston Gray)cpiwcgB334
CSPI04G10150Watermelon (97103) v1cpiwmB342
CSPI04G10150Watermelon (97103) v1cpiwmB363
CSPI04G10150Cucurbita pepo (Zucchini)cpecpiB569
CSPI04G10150Cucurbita pepo (Zucchini)cpecpiB619
CSPI04G10150Bottle gourd (USVL1VR-Ls)cpilsiB302