MELO3C010370.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C010370.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionRALF
Locationchr07 : 11598437 .. 11599342 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAAGAGTTTATTGACCACACAATTGGGATAAAGAAATTAGTGATCTAACTATCTTTCTATTGCAATTCCTTAGCCTACCAAAAGTAAACAAATAGATACACCCAATACATATTCCTCCACACCCAACTCTTCCCTCTTTCTAAATTATTGTTCACACTCGGGGCTTTCCTCAAACACCATGGCTACAACATTTTCGATACCAACTATGGCAATCATCATTCTGATTTTACTGTTCAACACAATCGGTTGCAACACAACGGTCAATGAGACAGCACCAGAGTGGTGCTACGGGTCCGAGAATTGCCTCATCGGCGATGAGAGCTCGGATTCGGAGTTTCTAATGGAGACAGACACCAGCCGGATGCTACTGGACTTTCAGAATTTACAAACTCCAAGCACTAACAACCCTAACAGACAATCGGTTCCTGAATGTGGGCGGCCGCCACGGTACGACAGCTGCATCGGCGAGAAAAGGAGTATCTCCAACCCTGAAAATTGTGACGTCCGAAATCGCGAAAATCCATGTTAGTCAACCTCATTTTTTAACTCCGATCAGAAGAATGGAAGCCATTGTATATGTTTAATTATCATTATTTGAATAATGAATTGCAATATCTGCTTTAATCCCATTCAGCTGTATAATTTTAATTACTCTCATTAGTTCATAATCATTACAGCAACTTCTTTAGTTAAGCTTTGATTCCAATTTTGTTAACATAATTTTCAAAATCTATTTTTACATCGAGTTGTGATATTGTGAGCTATGTTTGGTATGTTTTTCCGTATTACAATTAATGATAAAATATGTATTAATTAAAATGATTTTGTGTCGTAAACAAACTTTAAATAGTTTTATCAACACGTTTCTAGCAAATCTCTAACTTTCCCAACTAAAATTCTCATA

mRNA sequence

AAGAAGAGTTTATTGACCACACAATTGGGATAAAGAAATTAGTGATCTAACTATCTTTCTATTGCAATTCCTTAGCCTACCAAAAGTAAACAAATAGATACACCCAATACATATTCCTCCACACCCAACTCTTCCCTCTTTCTAAATTATTGTTCACACTCGGGGCTTTCCTCAAACACCATGGCTACAACATTTTCGATACCAACTATGGCAATCATCATTCTGATTTTACTGTTCAACACAATCGGTTGCAACACAACGGTCAATGAGACAGCACCAGAGTGGTGCTACGGGTCCGAGAATTGCCTCATCGGCGATGAGAGCTCGGATTCGGAGTTTCTAATGGAGACAGACACCAGCCGGATGCTACTGGACTTTCAGAATTTACAAACTCCAAGCACTAACAACCCTAACAGACAATCGGTTCCTGAATGTGGGCGGCCGCCACGGTACGACAGCTGCATCGGCGAGAAAAGGAGTATCTCCAACCCTGAAAATTGTGACGTCCGAAATCGCGAAAATCCATGTTAGTCAACCTCATTTTTTAACTCCGATCAGAAGAATGGAAGCCATTGTATATGTTTAATTATCATTATTTGAATAATGAATTGCAATATCTGCTTTAATCCCATTCAGCTGTATAATTTTAATTACTCTCATTAGTTCATAATCATTACAGCAACTTCTTTAGTTAAGCTTTGATTCCAATTTTGTTAACATAATTTTCAAAATCTATTTTTACATCGAGTTGTGATATTGTGAGCTATGTTTGGTATGTTTTTCCGTATTACAATTAATGATAAAATATGTATTAATTAAAATGATTTTGTGTCGTAAACAAACTTTAAATAGTTTTATCAACACGTTTCTAGCAAATCTCTAACTTTCCCAACTAAAATTCTCATA

Coding sequence (CDS)

ATGGCTACAACATTTTCGATACCAACTATGGCAATCATCATTCTGATTTTACTGTTCAACACAATCGGTTGCAACACAACGGTCAATGAGACAGCACCAGAGTGGTGCTACGGGTCCGAGAATTGCCTCATCGGCGATGAGAGCTCGGATTCGGAGTTTCTAATGGAGACAGACACCAGCCGGATGCTACTGGACTTTCAGAATTTACAAACTCCAAGCACTAACAACCCTAACAGACAATCGGTTCCTGAATGTGGGCGGCCGCCACGGTACGACAGCTGCATCGGCGAGAAAAGGAGTATCTCCAACCCTGAAAATTGTGACGTCCGAAATCGCGAAAATCCATGTTAG

Protein sequence

MATTFSIPTMAIIILILLFNTIGCNTTVNETAPEWCYGSENCLIGDESSDSEFLMETDTSRMLLDFQNLQTPSTNNPNRQSVPECGRPPRYDSCIGEKRSISNPENCDVRNRENPC
Homology
[Close]
BLAST of MELO3C010370.2 vs. NCBI nr
Match: KGN53800.1 (hypothetical protein Csa_4G131140 [Cucumis sativus])

HSP 1 Score: 201.8 bits (512), Expect = 1.2e-48
Identity = 97/116 (83.62%), Postives = 102/116 (87.93%), Query Frame = 0 

Query: 1   MATTFSIPTMAIIILILLFNTIGCNTTVNETAPEWCYGSENCLIGDESSDSEFLMETDTS 60
           MATTFSIPTMAI+IL LLFN   CNTTVNET  EWCYGSENCL+GDES DSEFLMET+TS
Sbjct: 1   MATTFSIPTMAILILTLLFNPTRCNTTVNETTSEWCYGSENCLVGDESLDSEFLMETETS 60

Query: 61  RMLLDFQNLQTPSTNNPNRQSVPECGRPPRYDSCIGEKRSISNPENCDVRNRENPC 117
           RMLLDFQNLQTP T +PNRQSV ECGRPPRYDSC GE+R I NPENCDVRNR NPC
Sbjct: 61  RMLLDFQNLQTPGTIDPNRQSVAECGRPPRYDSCTGEERQIPNPENCDVRNRANPC 116

[Close]
BLAST of MELO3C010370.2 vs. NCBI nr
Match: KGN53798.1 (hypothetical protein Csa_4G130630 [Cucumis sativus])

HSP 1 Score: 131.3 bits (329), Expect = 2.1e-27
Identity = 67/119 (56.30%), Postives = 84/119 (70.59%), Query Frame = 0 

Query: 1   MATTFSIPTMAIIILILLFNTIGCNTTVNETAPEWC--YGSENCLIGDESSDSEFLMETD 60
           MA T ++P+MA +I ILL N I  N  +N+T  +WC   G ENCL+GD +S SEFLM T+
Sbjct: 9   MAATLTMPSMAFLITILLLNPIISNAGMNDTESKWCDSTGLENCLVGDLNSHSEFLMLTE 68

Query: 61  TSRMLLD-FQNLQTPSTNNPNRQSVPECGRPPRYDSCIGEKRSISNPENCDVRNRENPC 117
           +S ML+D F   QTP  N+ N++SVP+C RPPRYDSC+G KRSI NPE C   NR NPC
Sbjct: 69  SSGMLVDQFLTFQTPKANDANKESVPDCSRPPRYDSCLGSKRSIPNPEPCSTLNRVNPC 127

[Close]
BLAST of MELO3C010370.2 vs. NCBI nr
Match: XP_023523220.1 (uncharacterized protein LOC111787479 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 94.4 bits (233), Expect = 2.8e-16
Identity = 56/122 (45.90%), Postives = 72/122 (59.02%), Query Frame = 0 

Query: 1   MATTFSIPTMAIIILILLFNTIGCNTTV------NETAPEWCYGSENCLIGDESSDSEFL 60
           MAT  ++   A+ I+ILL N I  +         N+T+    Y     LIGD+  DSEFL
Sbjct: 1   MATAAAMIPAAMAIMILLLNPINSDALTSFKPLNNDTSAAGKY-----LIGDQDIDSEFL 60

Query: 61  METDTSRMLLDFQNLQTPSTNNPNRQSVPECGRPPRYDSCIGEKRSISNPENCDVRNREN 117
           ME+  SR+L   QN QT +TN+ N+ S   CGRPPRYDSC+G+K +   PENC   NR N
Sbjct: 61  MESHISRILAGSQNFQTSNTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNN 117

[Close]
BLAST of MELO3C010370.2 vs. NCBI nr
Match: XP_022948338.1 (uncharacterized protein LOC111452044 [Cucurbita moschata])

HSP 1 Score: 90.5 bits (223), Expect = 4.0e-15
Identity = 54/111 (48.65%), Postives = 67/111 (60.36%), Query Frame = 0 

Query: 10  MAIIILILLFNTIGCNTTV----NETAPEWCYGSENCLIGDESSDSEFLMETDTSRMLLD 69
           MAI+IL+L   T    T+     N+T+    Y     LIGD+  DSEFLME+  SR+L  
Sbjct: 12  MAIMILLLNPTTSDALTSFKPLNNDTSAAGKY-----LIGDQDLDSEFLMESHISRILAG 71

Query: 70  FQNLQTPSTNNPNRQSVPECGRPPRYDSCIGEKRSISNPENCDVRNRENPC 117
            QN QT  TN+ N+ S   CGRPPRYDSC+G+K +   PENC   NR NPC
Sbjct: 72  SQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

[Close]
BLAST of MELO3C010370.2 vs. NCBI nr
Match: XP_022143399.1 (uncharacterized protein LOC111013278 [Momordica charantia])

HSP 1 Score: 89.0 bits (219), Expect = 1.2e-14
Identity = 54/118 (45.76%), Postives = 66/118 (55.93%), Query Frame = 0 

Query: 1   MATTFSIPTMAIIILILLFNTIGCN--TTVNETAPEWCYGSENCLIGDESSDSEFLMETD 60
           MAT   +    + + ILL N I C+  TT         +G+   LIGDE   SEFLME  
Sbjct: 1   MATAAVMIPTVMALAILLPNPIDCDALTTSKRLLNNETWGNHKRLIGDEDIGSEFLMELH 60

Query: 61  TSRMLLDFQNLQTPSTNNPNRQSVPECGRPPRYDSCIGEKRSISNPENCDVRNRENPC 117
            SR+L +    QT +T N N  SV +C RPPRYDSC+GEKR+    ENC   NR NPC
Sbjct: 61  LSRILAESLRFQTMTTPNANMGSVRDCERPPRYDSCLGEKRNTPPAENCGTFNRANPC 118

[Close]
BLAST of MELO3C010370.2 vs. TrEMBL
Match: tr|A0A0A0KVZ2|A0A0A0KVZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G131140 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 8.2e-49
Identity = 97/116 (83.62%), Postives = 102/116 (87.93%), Query Frame = 0 

Query: 1   MATTFSIPTMAIIILILLFNTIGCNTTVNETAPEWCYGSENCLIGDESSDSEFLMETDTS 60
           MATTFSIPTMAI+IL LLFN   CNTTVNET  EWCYGSENCL+GDES DSEFLMET+TS
Sbjct: 1   MATTFSIPTMAILILTLLFNPTRCNTTVNETTSEWCYGSENCLVGDESLDSEFLMETETS 60

Query: 61  RMLLDFQNLQTPSTNNPNRQSVPECGRPPRYDSCIGEKRSISNPENCDVRNRENPC 117
           RMLLDFQNLQTP T +PNRQSV ECGRPPRYDSC GE+R I NPENCDVRNR NPC
Sbjct: 61  RMLLDFQNLQTPGTIDPNRQSVAECGRPPRYDSCTGEERQIPNPENCDVRNRANPC 116

[Close]
BLAST of MELO3C010370.2 vs. TrEMBL
Match: tr|A0A0A0KW62|A0A0A0KW62_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G130630 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.4e-27
Identity = 67/119 (56.30%), Postives = 84/119 (70.59%), Query Frame = 0 

Query: 1   MATTFSIPTMAIIILILLFNTIGCNTTVNETAPEWC--YGSENCLIGDESSDSEFLMETD 60
           MA T ++P+MA +I ILL N I  N  +N+T  +WC   G ENCL+GD +S SEFLM T+
Sbjct: 9   MAATLTMPSMAFLITILLLNPIISNAGMNDTESKWCDSTGLENCLVGDLNSHSEFLMLTE 68

Query: 61  TSRMLLD-FQNLQTPSTNNPNRQSVPECGRPPRYDSCIGEKRSISNPENCDVRNRENPC 117
           +S ML+D F   QTP  N+ N++SVP+C RPPRYDSC+G KRSI NPE C   NR NPC
Sbjct: 69  SSGMLVDQFLTFQTPKANDANKESVPDCSRPPRYDSCLGSKRSIPNPEPCSTLNRVNPC 127

[Close]
BLAST of MELO3C010370.2 vs. TrEMBL
Match: tr|A0A0A0L711|A0A0A0L711_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298570 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 7.3e-13
Identity = 47/117 (40.17%), Postives = 64/117 (54.70%), Query Frame = 0 

Query: 2   ATTFSIPTMAIIILILLFNTI--GCNTTVNETAPEWCYGSENCLIGDESSDSEFLMETDT 61
           A    IP    ++L++L  T   G  T+          G    ++ +E   S F+ME+  
Sbjct: 4   APALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVMESHI 63

Query: 62  SRMLLDFQNLQTPSTNNPNRQSVPECGRPPRYDSCIGEKRSISNPENCDVRNRENPC 117
           SRML D Q+ +T STNN  + S  EC RPPRYDSC+G KR+   P+NC   NRE+PC
Sbjct: 64  SRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 120

[Close]
BLAST of MELO3C010370.2 vs. TrEMBL
Match: tr|A0A0A0LCJ4|A0A0A0LCJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298580 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.7e-12
Identity = 45/117 (38.46%), Postives = 62/117 (52.99%), Query Frame = 0 

Query: 2   ATTFSIPTMAIIILILLFNTIGCN--TTVNETAPEWCYGSENCLIGDESSDSEFLMETDT 61
           A+   IP   + +++LL     C+  TT               ++G+E  + EFLME+  
Sbjct: 3   ASALMIPAAVVTMILLLHIPSSCDALTTFQPLLSNHSSYGGKLMMGEEDMELEFLMESHI 62

Query: 62  SRMLLDFQNLQTPSTNNPNRQSVPECGRPPRYDSCIGEKRSISNPENCDVRNRENPC 117
           SR+L   +N QT ST N N+ S   C RPPRYDSC+G+KR+     NC   NR NPC
Sbjct: 63  SRILASSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNXXXXPNCSPYNRANPC 119

[Close]
BLAST of MELO3C010370.2 vs. TrEMBL
Match: tr|A0A0A0L9X5|A0A0A0L9X5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298070 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.8e-11
Identity = 53/119 (44.54%), Postives = 69/119 (57.98%), Query Frame = 0 

Query: 2   ATTFSIPTMAIIILILLFNTIGCNTTVNETAPEWCYGSE--NCLIGDESSDSEFLMETDT 61
           A T SI T   I+ +LL   +GC+  +  + P +   S+    LIGD   D++FLME+  
Sbjct: 3   AATLSIRTTLAIVTLLLV-AVGCDAFI-ASKPVFNLSSDLGKRLIGD--IDTDFLMESHV 62

Query: 62  SRML--LDFQNLQTPSTNNPNRQSVPECGRPPRYDSCIGEKRSISNPENCDVRNRENPC 117
           SR+L  L F+ ++TP   N N  SV  C RPPRYDSC+GE R     ENCD  NR NPC
Sbjct: 63  SRILAELRFETMRTP---NANSASVVNCERPPRYDSCLGEARDNPPSENCDPYNRANPC 114

The following BLAST results are available for this feature:
BLAST of MELO3C010370.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53800.11.2e-4883.62hypothetical protein Csa_4G131140 [Cucumis sativus][more]
KGN53798.12.1e-2756.30hypothetical protein Csa_4G130630 [Cucumis sativus][more]
XP_023523220.12.8e-1645.90uncharacterized protein LOC111787479 [Cucurbita pepo subsp. pepo][more]
XP_022948338.14.0e-1548.65uncharacterized protein LOC111452044 [Cucurbita moschata][more]
XP_022143399.11.2e-1445.76uncharacterized protein LOC111013278 [Momordica charantia][more]
BLAST of MELO3C010370.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C010370.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C010370.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KVZ2|A0A0A0KVZ2_CUCSA8.2e-4983.62Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G131140 PE=4 SV=1[more]
tr|A0A0A0KW62|A0A0A0KW62_CUCSA1.4e-2756.30Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G130630 PE=4 SV=1[more]
tr|A0A0A0L711|A0A0A0L711_CUCSA7.3e-1340.17Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298570 PE=4 SV=1[more]
tr|A0A0A0LCJ4|A0A0A0LCJ4_CUCSA4.7e-1238.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298580 PE=4 SV=1[more]
tr|A0A0A0L9X5|A0A0A0L9X5_CUCSA6.8e-1144.54Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298070 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C010370.2.1MELO3C010370.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C010370.2CSPI04G10150Wild cucumber (PI 183967)cpimedB304
MELO3C010370.2Lsi07G009400Bottle gourd (USVL1VR-Ls)lsimedB466
MELO3C010370.2ClCG07G016510Watermelon (Charleston Gray)medwcgB485
MELO3C010370.2Cla97C07G143510Watermelon (97103) v2medwmbB488
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C010370.2Cucumber (Chinese Long) v3cucmedB080
MELO3C010370.2Cucumber (Chinese Long) v3cucmedB310
MELO3C010370.2Watermelon (97103) v2medwmbB472
MELO3C010370.2Wax gourdmedwgoB591
MELO3C010370.2Wax gourdmedwgoB598
MELO3C010370.2Cucumber (Gy14) v2cgybmedB067
MELO3C010370.2Cucumber (Gy14) v2cgybmedB269
MELO3C010370.2Cucumber (Gy14) v1cgymedB162
MELO3C010370.2Cucurbita maxima (Rimu)cmamedB232
MELO3C010370.2Cucurbita maxima (Rimu)cmamedB280
MELO3C010370.2Cucurbita maxima (Rimu)cmamedB502
MELO3C010370.2Cucurbita moschata (Rifu)cmomedB216
MELO3C010370.2Cucurbita moschata (Rifu)cmomedB266
MELO3C010370.2Cucurbita moschata (Rifu)cmomedB490
MELO3C010370.2Cucurbita pepo (Zucchini)cpemedB570
MELO3C010370.2Cucurbita pepo (Zucchini)cpemedB641
MELO3C010370.2Cucurbita pepo (Zucchini)cpemedB700
MELO3C010370.2Wild cucumber (PI 183967)cpimedB071
MELO3C010370.2Cucumber (Chinese Long) v2cumedB073
MELO3C010370.2Cucumber (Chinese Long) v2cumedB300
MELO3C010370.2Melon (DHL92) v3.6.1medmedB073
MELO3C010370.2Watermelon (Charleston Gray)medwcgB468
MELO3C010370.2Watermelon (97103) v1medwmB505
MELO3C010370.2Watermelon (97103) v1medwmB521