CsGy4G007300 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G007300
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	protein Iojap, chloroplastic
Location	Chr4 : 5381073 .. 5385608 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAATTAGAATATTTTTAAAGTTCACAAATGGCGACTCTTGCACAAGATGTTCCATTAAAAAAAAAAAAAAAATTAAACTTTAGTATGTTTTTCTTTGAAATTTAATGAATTTGGAGACGAGGAAGAGCAACAGAAGTTGTATACTTTATGGGTTAATAATATGGAGTTTAATTTCATGAATGAAATGATGAAGATGCGACAATTGGATTTGACAAATAAACATTGCTTCATCGTTTAAAAACATCTTCCCTCACCGCAAAAGGACACAACCATGGCGTTATCCACTACCTTATCTCTTCACGGCGCCGGTGCCGGAACCTTGTTTGGCGCTGAGCTCCGGCAATTGGGTCACGATTATTTCGGAGTTTTCAAAAGACCCAGAAAACAAATTTTCTGCTCATGCTGGAATGGGTCTCCATTTCCTTACCGAAACTGCCTTTGGAGGGTACCCTCTGTCAATAACTTCCATTTGAAGTCAATGGAGTCCTCGCCATTGTTCGCCGTCGGAGGAGAAGCTGAAGATGGCTTTTTATCGGTATTTTCTTTTCATTTCCTTTGTTTGGAACTAACTTGAATTATGTTTCGTTAATATGTATTTGGAATAGATTTCGTTCTTGTTACTAATTGATGTGTGGTTTCTGGGATTTCGTTGAGGCATAACTTGATTGATCGAAATCTTACCTTTTTCTTTGTTCAAAATGGATGTTATTTGCTAAAAGAAAAGAGGCTTCTCTCTTATCTTTCCCCTTTATTTTTGGAGCTGAAGCTACTTGGGATTATGGGAGGAACCTTATCTACTTGGAAGTTATTTGCAAAAAGAAAAAGAAGCTCACTTATCTCTCTCTCTTTGTATTTTTTTTCCTTTTGCACTGGTTGTTTGAATGCTGCAGCTAATTGGGAATTGATAAGAACCTTGTCAAAATTAAGAAAGTTATTAGCAAAAACAACAGGAGCCCTCCTCCTTGGATCTACTGGGGAAGACTATTCTCAAAATGAGAGTAACTTGCAAAAGAAAATTAGTCTCTCCATCTCCCTCTTTCATATTCCCTTTACTTTGATCTTTGGATGATGCAGCTGCCTGAGAGGAGCTTCATCAAATCGGAAGTTTCAAAAGAAAGAAGAAATCTGTCTCTCTCTTTCTCTCTTCTGTAGTTTTCCTTGATAATGGTGGGATTGAGTTACTTTGAACTGTATTAAACATTCAGTATTGAGTACAGTGATTTAGCCTATGAATCATACTTTATGTTTCTTTACTGGGTTCTAAATGATGCTTTTTGTAAAAAGGAAACAAGAAACTGACGATTGAAGAGGCTGAATCCAAGACACTCTTTTGAATTGTTCTGGAACTTGTATGTTCATTTACTTGCTGATCTTCGTAGAAAAATCAAGTCATCATTATGTTTTCATTTTCAGACTCAAATTTAATTTGGATTTTGGTGAAGGAAAAAAAATACTAATCAAACCGATCTATACTAACTCTGGATATCAATTTATTTTAAATGATTGCCTTAGGGTAAAGATCGTAATGGTTTCTATTACACATTCTAAATGTCTGATATTTTTGTTGCTGTTGCACGTTACTGCAACTACTTGCGATACTTGCGATACTGTCAGACTCAAACTTAAATTTGGTATAAAGGAAAAAAAAATACTAATCAAACTGGTCTGCACTAACTTTTGATATTAATTTATTTTAAATGATTGCCATAGGGTAGAGATCTTGATGCATTTTATTGCGCATTTAAATGTCGGATGCTTTTTGTTGTGAAGTACTGCATTTGCTTGTGATATTGATCAACCCAGTCAATGATTTCTGGCAGAATATGAATGATGAAACCGATGACATGTATGATGAATTGTTCAAGAAATATGGGAATGTGGTATTCAAGAGCAATGACCAAAAGCCTCCCAGTGCAGAAATTGACAATGACTCGGAAAGCCTTTCATGTAAGTGATATCTCTTTACATTAGCAAGATCAAGAAGCAAACATAAGCATGTTGTGGACAAATCTGTTGTGTTCATGTGGTGATTTGCCTGCCAACTGCCTGCTTCATCTATGAGTATAATGAATAATCTTAGCTAATATATCTTAATTTGATATGGTTTCTAGTAGTGTTGTTGTTAAGTATTTAAACGAAAGGAATGGAACAATCTTATCATTCTTTGGTTGAATCAGTAACAGAAATGGGAAGTGGAATGGAAAAAATGATTTCCTTGGCATTTCCAGAGGTTTCTTTTCCCCTCTCATTTGATGTGAAATGGTTACGTACAAATTACATATCTATCCAAAAACAAGTGTAGATCGTCGAATCCACCTGGGCAGTCCTTTTAATTGGAGAAGTTGAGAGAATTCATATTCATTCTGAAGGGATTGAATAAGCCTTTTGGATGTGTACCATAGACAACAAAATAGCGAAAGAAAACAGTCTAAGGGCAGCGGAAGATGTGACCCTTCCTGTAGAAACTAAAAAACTGCTATCCAGTAGTTTCGAATCAGTTAAAAATGAATTTTGTTTCTCACACGCCACCAGGACACTCTAAGCTGTACATTACTACAAAAACCCTCAAAGAGCAATCAAAGATAGAAAACAATAGGTACCTCAAGTTTTCAACTTTTCAATAGGCAGAAAGCAACTATGGACGAACAATTAGTACATAATTAACATACGTATTTTGTCCAGTTATATTGTGAATTCAAAACTTCATTACATGGAATGATTCGTGAACTAATTTTCCAATGCTTATCTCTGTAGTTGCTGTATCAATGGCGAAGGTTGCAAGTGATGTAAAGGCTGCAGATATCCGGGTTCTATTTGTGAAACCTCTAGTTTATTGGACAAGATTTTTCATCATTGCAACAGCATTTTCTCGCCCTCAGATCGATGCTATTGGGTACTGCTGCCTTTTTGGTTTGTTGTCCTCTTATCGCTTGCAATAAGGAAATCTATATATGAAGGTTTTCCTTAAACTGATGTTCAATTATATTTTCCAATGCAGATCCCGAATAAGAGATCTTGCCGAGAAGAAGTATGGAAGAAGTCCTTCTGGTGATGTGAAGCCAAATTCCTGGACTTTGTTGGATTTTGGTATGCACTATTTGTATTTCACTTTGATGATAAATGAGTGTTCCGTTAGAGATGATGGATGCACCAGAAACCTGGACAGAGAACCAATTAGAAAGAAACAACTTGTGTTGAACTAATAGCTATACGAAAATACGTAGTATACCTAGAGGAAAAAAAAACTCCTGAAATGATCCTTCTAGGTACTAGTTCAAGCTCTTTGGTGGATGTTTCTAAATAGCAGCTTTTAGAGTGAGCAAAATTTTTCTGAGATTTAGTAGTAGGGATGGATGATGAACTTAATGTAAGTAGTGAGGCCATTTAATTTGGTGGCATCCCATTTATATGAAAAAGGAATTGATGTATAAATGTCCGTAGCGAAGATCTAAAGAGCATTAGATTCTAATCTCGTGAAGTACCAATGCTTCAATCTTTAAAAAAAACCATTTCAGATTAAGTCTATCAAAATGAAATGTGATTTTTCACCAATCAGAGCTCATCATTTAATATAGAGCGGATATGGCTTTGAGACCTCTTTGTGACTATAGGATCATTTTATCATCGCTTTATTATCGGTGTGCTATGCCTTTTTCCATATTATGTGTGAAGTCCATTTTGGAATTCAGTTAAGATATTAGTCCAAAATGTGCATCGATTGATCTTTGATACCGAAGAACTAAGAAGTAAAGCAAATTGCTGTGATGTTTTTTGTTCTCAGGAGATGTGGTTATCCATATTTTTCTACCCCAGCAGAGGGCATTCTATAACTTGGAAGAGTTCTATGGCAATGCAACTCCCGTGGAGCTACCGTTCGAAAACCAACGGCCGTTTTGAAGTAAAAACCGCAGCGGATTTCCCGCCGAGCAGCTGATGGTGAAGGAAAAATGCAGTTTGTTGGCAGCTGGTGAGGCAGATTGCTTATGTTTGTTGTGTCCTCTCATGAAAACAGCTACCATGTGAAGTGTTGCAGAAGCAGCTGCATGAGTTGGGAGTTCCAACTTCTGACTGCTTGAGGTTGAAGACAGAATCACTTGGCAGATGGTGGTATTATTGAGAGCCCTATCCCAAACTTTCTTCTGTCTCCTAACTCTCCCTTTCTCTTTCTCTTTCTCTTTCTCTCTCTTATGAATCACTGGTTTGATTTGAGATAGTTTTTAAGTAAAGTTAGTTGTTATGAATCTAGTTGGTTAGAAGGGGCCCTATTACTTACACCAATGAATTAAGATTCCATTACTAATTGGAGAAAACTTGTAGGAGAATTAAAATGAATTTGGTTTGGTCAAGTATTGTATTCGAATTTCTTGTATATTAAGGATATCAGAGAATCTCCATCTCATACTATTGTATTCAATATTCATATTGTTCTCATGGTTGAAGTGAGAATTGATTTTTAATTTGCAGAATCTTTTGTTAAACTACAAAAATGAAAATCAAAAGAAATAAAACAGATTTGGATCAACATTTTAAGCGA

mRNA sequence

TAAAATTAGAATATTTTTAAAGTTCACAAATGGCGACTCTTGCACAAGATGTTCCATTAAAAAAAAAAAAAAAATTAAACTTTAGTATGTTTTTCTTTGAAATTTAATGAATTTGGAGACGAGGAAGAGCAACAGAAGTTGTATACTTTATGGGTTAATAATATGGAGTTTAATTTCATGAATGAAATGATGAAGATGCGACAATTGGATTTGACAAATAAACATTGCTTCATCGTTTAAAAACATCTTCCCTCACCGCAAAAGGACACAACCATGGCGTTATCCACTACCTTATCTCTTCACGGCGCCGGTGCCGGAACCTTGTTTGGCGCTGAGCTCCGGCAATTGGGTCACGATTATTTCGGAGTTTTCAAAAGACCCAGAAAACAAATTTTCTGCTCATGCTGGAATGGGTCTCCATTTCCTTACCGAAACTGCCTTTGGAGGGTACCCTCTGTCAATAACTTCCATTTGAAGTCAATGGAGTCCTCGCCATTGTTCGCCGTCGGAGGAGAAGCTGAAGATGGCTTTTTATCGAATATGAATGATGAAACCGATGACATGTATGATGAATTGTTCAAGAAATATGGGAATGTGGTATTCAAGAGCAATGACCAAAAGCCTCCCAGTGCAGAAATTGACAATGACTCGGAAAGCCTTTCATTTGCTGTATCAATGGCGAAGGTTGCAAGTGATGTAAAGGCTGCAGATATCCGGGTTCTATTTGTGAAACCTCTAGTTTATTGGACAAGATTTTTCATCATTGCAACAGCATTTTCTCGCCCTCAGATCGATGCTATTGGATCCCGAATAAGAGATCTTGCCGAGAAGAAGTATGGAAGAAGTCCTTCTGGTGATGTGAAGCCAAATTCCTGGACTTTGTTGGATTTTGGAGATGTGGTTATCCATATTTTTCTACCCCAGCAGAGGGCATTCTATAACTTGGAAGAGTTCTATGGCAATGCAACTCCCGTGGAGCTACCGTTCGAAAACCAACGGCCGTTTTGAAGTAAAAACCGCAGCGGATTTCCCGCCGAGCAGCTGATGGTGAAGGAAAAATGCAGTTTGTTGGCAGCTGGTGAGGCAGATTGCTTATGTTTGTTGTGTCCTCTCATGAAAACAGCTACCATGTGAAGTGTTGCAGAAGCAGCTGCATGAGTTGGGAGTTCCAACTTCTGACTGCTTGAGGTTGAAGACAGAATCACTTGGCAGATGGTGGTATTATTGAGAGCCCTATCCCAAACTTTCTTCTGTCTCCTAACTCTCCCTTTCTCTTTCTCTTTCTCTTTCTCTCTCTTATGAATCACTGGTTTGATTTGAGATAGTTTTTAAGTAAAGTTAGTTGTTATGAATCTAGTTGGTTAGAAGGGGCCCTATTACTTACACCAATGAATTAAGATTCCATTACTAATTGGAGAAAACTTGTAGGAGAATTAAAATGAATTTGGTTTGGTCAAGTATTGTATTCGAATTTCTTGTATATTAAGGATATCAGAGAATCTCCATCTCATACTATTGTATTCAATATTCATATTGTTCTCATGGTTGAAGTGAGAATTGATTTTTAATTTGCAGAATCTTTTGTTAAACTACAAAAATGAAAATCAAAAGAAATAAAACAGATTTGGATCAACATTTTAAGCGA

Coding sequence (CDS)

ATGGCGTTATCCACTACCTTATCTCTTCACGGCGCCGGTGCCGGAACCTTGTTTGGCGCTGAGCTCCGGCAATTGGGTCACGATTATTTCGGAGTTTTCAAAAGACCCAGAAAACAAATTTTCTGCTCATGCTGGAATGGGTCTCCATTTCCTTACCGAAACTGCCTTTGGAGGGTACCCTCTGTCAATAACTTCCATTTGAAGTCAATGGAGTCCTCGCCATTGTTCGCCGTCGGAGGAGAAGCTGAAGATGGCTTTTTATCGAATATGAATGATGAAACCGATGACATGTATGATGAATTGTTCAAGAAATATGGGAATGTGGTATTCAAGAGCAATGACCAAAAGCCTCCCAGTGCAGAAATTGACAATGACTCGGAAAGCCTTTCATTTGCTGTATCAATGGCGAAGGTTGCAAGTGATGTAAAGGCTGCAGATATCCGGGTTCTATTTGTGAAACCTCTAGTTTATTGGACAAGATTTTTCATCATTGCAACAGCATTTTCTCGCCCTCAGATCGATGCTATTGGATCCCGAATAAGAGATCTTGCCGAGAAGAAGTATGGAAGAAGTCCTTCTGGTGATGTGAAGCCAAATTCCTGGACTTTGTTGGATTTTGGAGATGTGGTTATCCATATTTTTCTACCCCAGCAGAGGGCATTCTATAACTTGGAAGAGTTCTATGGCAATGCAACTCCCGTGGAGCTACCGTTCGAAAACCAACGGCCGTTTTGA

Protein sequence

MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVPSVNNFHLKSMESSPLFAVGGEAEDGFLSNMNDETDDMYDELFKKYGNVVFKSNDQKPPSAEIDNDSESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRIRDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFENQRPF

Homology

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BLAST of CsGy4G007300 vs. NCBI nr
Match: XP_004147757.1 (PREDICTED: protein Iojap, chloroplastic [Cucumis sativus] >KGN53523.1 hypothetical protein Csa_4G064060 [Cucumis sativus])

HSP 1 Score: 502.7 bits (1293), Expect = 7.2e-139
Identity = 243/244 (99.59%), Postives = 244/244 (100.00%), Query Frame = 0


Query: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60
           MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP
Sbjct: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60

Query: 61  SVNNFHLKSMESSPLFAVGGEAEDGFLSNMNDETDDMYDELFKKYGNVVFKSNDQKPPSA 120
           SVNNFHLKSMESSPLFAVGGEAEDGFLSNMNDETDDMYDELFKKYGNVVFKSNDQKPPSA
Sbjct: 61  SVNNFHLKSMESSPLFAVGGEAEDGFLSNMNDETDDMYDELFKKYGNVVFKSNDQKPPSA 120

Query: 121 EIDNDSESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           EID+DSESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EIDDDSESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 245
           QRPF
Sbjct: 241 QRPF 244

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BLAST of CsGy4G007300 vs. NCBI nr
Match: XP_023524638.1 (protein Iojap, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 449.1 bits (1154), Expect = 9.4e-123
Identity = 214/244 (87.70%), Postives = 229/244 (93.85%), Query Frame = 0


Query: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60
           MALS  LSLHGAGAGT FG + RQLGHDYFGV  RPRKQ +CSCWNGS F  RNC+W++P
Sbjct: 1   MALSIVLSLHGAGAGTSFGGQFRQLGHDYFGVSGRPRKQFWCSCWNGSSFSSRNCIWKIP 60

Query: 61  SVNNFHLKSMESSPLFAVGGEAEDGFLSNMNDETDDMYDELFKKYGNVVFKSNDQKPPSA 120
           S NNFHLKSMESSPLFAVG EAED FLSNMN++TDDMYD+LFKK+G+VVFK NDQKPP+A
Sbjct: 61  SSNNFHLKSMESSPLFAVGKEAEDSFLSNMNEDTDDMYDDLFKKHGSVVFKRNDQKPPTA 120

Query: 121 EIDNDSESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           E+D+D+ESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 245
           Q+PF
Sbjct: 241 QQPF 244

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BLAST of CsGy4G007300 vs. NCBI nr
Match: XP_022942371.1 (protein Iojap, chloroplastic [Cucurbita moschata])

HSP 1 Score: 445.7 bits (1145), Expect = 1.0e-121
Identity = 212/244 (86.89%), Postives = 229/244 (93.85%), Query Frame = 0


Query: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60
           MALS  LSLHGAGAGT FG + RQLGHDYFGV  RPRKQ +CSCWNGS F  +NC+W++P
Sbjct: 1   MALSIVLSLHGAGAGTSFGGQFRQLGHDYFGVSGRPRKQFWCSCWNGSSFSSQNCIWKIP 60

Query: 61  SVNNFHLKSMESSPLFAVGGEAEDGFLSNMNDETDDMYDELFKKYGNVVFKSNDQKPPSA 120
           S NNFHLKSMESSPLFAVG EAED FLSNMN++TDDMYD+LFKK+G+VVFK +DQKPP+A
Sbjct: 61  SSNNFHLKSMESSPLFAVGKEAEDSFLSNMNEDTDDMYDDLFKKHGSVVFKRDDQKPPTA 120

Query: 121 EIDNDSESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           E+D+D+ESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 245
           Q+PF
Sbjct: 241 QQPF 244

[Close]

BLAST of CsGy4G007300 vs. NCBI nr
Match: XP_022982446.1 (protein Iojap, chloroplastic [Cucurbita maxima])

HSP 1 Score: 442.6 bits (1137), Expect = 8.8e-121
Identity = 212/244 (86.89%), Postives = 227/244 (93.03%), Query Frame = 0


Query: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60
           MALS  LSLHGAGA T FG E RQLGHDYF V  RPRKQ +CSCWNGS F  RNC+W++P
Sbjct: 1   MALSIVLSLHGAGAVTSFGGEFRQLGHDYFRVSGRPRKQFWCSCWNGSSFSSRNCIWKIP 60

Query: 61  SVNNFHLKSMESSPLFAVGGEAEDGFLSNMNDETDDMYDELFKKYGNVVFKSNDQKPPSA 120
           S +NFHLKSMESSPLF+VG EAED FLSNMN++TDDMYD+LFKK+GNVVFK NDQKPP+A
Sbjct: 61  SSHNFHLKSMESSPLFSVGKEAEDSFLSNMNEDTDDMYDDLFKKHGNVVFKRNDQKPPTA 120

Query: 121 EIDNDSESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           E+D+D+ESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 245
           Q+PF
Sbjct: 241 QQPF 244

[Close]

BLAST of CsGy4G007300 vs. NCBI nr
Match: XP_022136946.1 (protein Iojap, chloroplastic [Momordica charantia])

HSP 1 Score: 430.6 bits (1106), Expect = 3.5e-117
Identity = 213/248 (85.89%), Postives = 226/248 (91.13%), Query Frame = 0


Query: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWN----GSPFPYRNCL 60
           MALST LSLHG GAGTLFG E RQLGH+ F +  RPRKQ   S WN     SPFPYRNC+
Sbjct: 1   MALSTILSLHG-GAGTLFGGEFRQLGHEVFRISIRPRKQFCRSSWNXXXXXSPFPYRNCI 60

Query: 61  WRVPSVNNFHLKSMESSPLFAVGGEAEDGFLSNMNDETDDMYDELFKKYGNVVFKSNDQK 120
           WR+PS +NFHLKSMESSPLFAVGGEAED  LSNM+++TDDMYD+LFKKYGNVVFKSNDQK
Sbjct: 61  WRLPSASNFHLKSMESSPLFAVGGEAEDSSLSNMSEDTDDMYDDLFKKYGNVVFKSNDQK 120

Query: 121 PPSAEIDNDSESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAI 180
            PSAE+D+D+ESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAI
Sbjct: 121 LPSAEVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAI 180

Query: 181 GSRIRDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVEL 240
           GSR+RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQR FYNLEEFYGNATPVEL
Sbjct: 181 GSRLRDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQREFYNLEEFYGNATPVEL 240

Query: 241 PFENQRPF 245
           PFENQRPF
Sbjct: 241 PFENQRPF 247

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BLAST of CsGy4G007300 vs. TAIR10
Match: AT3G12930.1 (Lojap-related protein)

HSP 1 Score: 287.0 bits (733), Expect = 1.1e-77
Identity = 149/241 (61.83%), Postives = 181/241 (75.10%), Query Frame = 0


Query: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60
           MA ST L++    AG L   + R        + ++    + C        PY NC WR+ 
Sbjct: 1   MASSTGLTV----AGALLAGDFRLPAVSSL-IPRKTSSSLSCLSNRDLSSPY-NCCWRLS 60

Query: 61  SVNNFHLKSMESSPLFAVGGEAEDGFLSNMNDETDDMYDELFKKYGNVVFKSNDQKPPSA 120
                 L S+ +S  FAVG EAEDGFLSN++++TD+M+D+LF KYG VVF+S D K P+A
Sbjct: 61  --RGKILTSLSNSRKFAVGKEAEDGFLSNVSEDTDEMFDDLFNKYGKVVFRSTDVKSPTA 120

Query: 121 EIDNDSESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           E+D+D+ESL+FAV +AKVASDVKA DI+VLFVKPLVYWTRFFIIATAFSRPQIDAIGSR+
Sbjct: 121 EVDDDAESLAFAVELAKVASDVKAGDIKVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRM 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYG+  +GDVKPNSWTLLDFGDVVIH+FLP QR FYNLE+FYGNA  +ELPFE+
Sbjct: 181 RDLAEKKYGKVANGDVKPNSWTLLDFGDVVIHLFLPPQRTFYNLEDFYGNAMQIELPFED 233

Query: 241 Q 242
           Q
Sbjct: 241 Q 233

[Close]

BLAST of CsGy4G007300 vs. Swiss-Prot
Match: sp|Q9LDY9|IOJAC_ARATH (Protein Iojap, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IJ PE=2 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 2.0e-76
Identity = 149/241 (61.83%), Postives = 181/241 (75.10%), Query Frame = 0


Query: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60
           MA ST L++    AG L   + R        + ++    + C        PY NC WR+ 
Sbjct: 1   MASSTGLTV----AGALLAGDFRLPAVSSL-IPRKTSSSLSCLSNRDLSSPY-NCCWRLS 60

Query: 61  SVNNFHLKSMESSPLFAVGGEAEDGFLSNMNDETDDMYDELFKKYGNVVFKSNDQKPPSA 120
                 L S+ +S  FAVG EAEDGFLSN++++TD+M+D+LF KYG VVF+S D K P+A
Sbjct: 61  --RGKILTSLSNSRKFAVGKEAEDGFLSNVSEDTDEMFDDLFNKYGKVVFRSTDVKSPTA 120

Query: 121 EIDNDSESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           E+D+D+ESL+FAV +AKVASDVKA DI+VLFVKPLVYWTRFFIIATAFSRPQIDAIGSR+
Sbjct: 121 EVDDDAESLAFAVELAKVASDVKAGDIKVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRM 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYG+  +GDVKPNSWTLLDFGDVVIH+FLP QR FYNLE+FYGNA  +ELPFE+
Sbjct: 181 RDLAEKKYGKVANGDVKPNSWTLLDFGDVVIHLFLPPQRTFYNLEDFYGNAMQIELPFED 233

Query: 241 Q 242
           Q
Sbjct: 241 Q 233

[Close]

BLAST of CsGy4G007300 vs. Swiss-Prot
Match: sp|Q41822|IOJAP_MAIZE (Protein Iojap, chloroplastic OS=Zea mays OX=4577 GN=Ij PE=1 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 5.7e-55
Identity = 103/159 (64.78%), Postives = 127/159 (79.87%), Query Frame = 0


Query: 88  SNMN----DETDDMYDELFKKYGNVVFKSNDQKPPSAEIDNDSESLSFAVSMAKVASDVK 147
           SN+N    D+ D + ++L K++G VV+ S     P+ E D+D+E LSFAVS+AK AS++K
Sbjct: 69  SNVNFGRGDDADKLLEDLLKQHGEVVYSSGGPPDPTVEADDDAECLSFAVSLAKAASEIK 128

Query: 148 AADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRIRDLAEKKYGRSPSGDVKPNSWTL 207
           A DIRVL V+ LVYWTRFFII TAFS  QIDAI S++RD+ EK++ +  SGD KPNSWTL
Sbjct: 129 ATDIRVLCVRRLVYWTRFFIILTAFSNAQIDAISSKMRDIGEKQFSKVASGDTKPNSWTL 188

Query: 208 LDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFENQR 243
           LDFGDVV+HIFLPQQRAFYNLEEFYGNATP+ELPF+ QR
Sbjct: 189 LDFGDVVVHIFLPQQRAFYNLEEFYGNATPIELPFDTQR 227

[Close]

BLAST of CsGy4G007300 vs. Swiss-Prot
Match: sp|P73658|IOJAP_SYNY3 (Ribosomal silencing factor RsfS OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rsfS PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.7e-14
Identity = 41/101 (40.59%), Postives = 62/101 (61.39%), Query Frame = 0


Query: 134 SMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRIRDLAEKKYGRSPS 193
           ++A+ A + KA D+ +L V  + Y   +F+I T FSR Q+ AI   I    E  +G+ P+
Sbjct: 33  TIAQAAEERKAGDLVILKVTDVSYLADYFVICTGFSRTQVRAIADNIEKQVELVHGQLPT 92

Query: 194 GDVKPNS---WTLLDFGDVVIHIFLPQQRAFYNLEEFYGNA 232
              + NS   W L DFGDV++H F+P++R FY LE F+G+A
Sbjct: 93  -HTEGNSESIWVLQDFGDVLVHTFMPEEREFYKLEAFWGHA 132

[Close]

BLAST of CsGy4G007300 vs. Swiss-Prot
Match: sp|Q97P97|IOJAP_STRPN (Ribosomal silencing factor RsfS OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=rsfS PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.9e-10
Identity = 42/115 (36.52%), Postives = 63/115 (54.78%), Query Frame = 0


Query: 124 NDSESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRIRD- 183
           N+ E L   V   K A + +A DI  L V+ L   T + +I ++ +  Q+DAI + IR+ 
Sbjct: 2   NEKELLELVV---KAADEKRAEDILALDVQDLTSVTDYLVITSSMNSRQLDAIAANIREK 61

Query: 184 LAEKKY-GRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVEL 237
           +A+  + G    GD     W LLD G VV+HIF  + RA YNLE+ +  A  V++
Sbjct: 62  VAQAGFKGSHVEGDA-AGGWVLLDLGAVVVHIFSEEMRAHYNLEKLWHEANSVDI 112

[Close]

BLAST of CsGy4G007300 vs. Swiss-Prot
Match: sp|Q9KD89|IOJAP_BACHD (Ribosomal silencing factor RsfS OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=rsfS PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.6e-09
Identity = 38/114 (33.33%), Postives = 59/114 (51.75%), Query Frame = 0


Query: 124 NDSESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRIRDL 183
           ++ E L  AV+      D KA  +  L +K +     FF+I    S  Q+ AI   ++ +
Sbjct: 2   SNQELLQLAVN---AVDDKKAEQVVALNMKGISLIADFFLICHGNSEKQVQAIAHELKKV 61

Query: 184 A-EKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVEL 237
           A E+          +   W L+D GDVV+H+F   +RA+YNLE+ +G+A  VEL
Sbjct: 62  AQEQGIEIKRLEGYEQARWVLIDLGDVVVHVFHKDERAYYNLEKLWGDAPTVEL 112

[Close]

BLAST of CsGy4G007300 vs. TrEMBL
Match: tr|A0A0A0KVG5|A0A0A0KVG5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G064060 PE=3 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 4.7e-139
Identity = 243/244 (99.59%), Postives = 244/244 (100.00%), Query Frame = 0


Query: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60
           MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP
Sbjct: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60

Query: 61  SVNNFHLKSMESSPLFAVGGEAEDGFLSNMNDETDDMYDELFKKYGNVVFKSNDQKPPSA 120
           SVNNFHLKSMESSPLFAVGGEAEDGFLSNMNDETDDMYDELFKKYGNVVFKSNDQKPPSA
Sbjct: 61  SVNNFHLKSMESSPLFAVGGEAEDGFLSNMNDETDDMYDELFKKYGNVVFKSNDQKPPSA 120

Query: 121 EIDNDSESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           EID+DSESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EIDDDSESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 245
           QRPF
Sbjct: 241 QRPF 244

[Close]

BLAST of CsGy4G007300 vs. TrEMBL
Match: tr|A0A1Q3B819|A0A1Q3B819_CEPFO (Oligomerisation domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_07628 PE=3 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 1.8e-85
Identity = 161/248 (64.92%), Postives = 190/248 (76.61%), Query Frame = 0


Query: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60
           MA+S TLSL GAG G +F  E  Q+G     + KRP K     C NG    + NC W++P
Sbjct: 1   MAVSATLSLAGAGNGAIFYGEFEQVGRVNSKLCKRPTKHFDWFCLNGHQILHANCYWQIP 60

Query: 61  ----SVNNFHLKSMESSPLFAVGGEAEDGFLSNMNDETDDMYDELFKKYGNVVFKSNDQK 120
                + NF  + +     +  G +    +L N++++TDDM+D+LF+KYG VVF+SN+QK
Sbjct: 61  RNGGKLQNFKSRDLPLPLAYGKGAKVMT-YLQNVSEDTDDMFDDLFRKYGKVVFRSNEQK 120

Query: 121 PPSAEIDNDSESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAI 180
           PP+AE+D+D+ESLSFAV MAKVASDVKA DI+VLFVKPLVYWTRFFII TAFSRPQIDAI
Sbjct: 121 PPTAEVDDDAESLSFAVEMAKVASDVKAGDIKVLFVKPLVYWTRFFIIVTAFSRPQIDAI 180

Query: 181 GSRIRDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVEL 240
           GSRIRDLAEKKYG+ PSGD KPNSWTLLDFGDVVIHIFLP QRAFYNLEEFYGNAT +EL
Sbjct: 181 GSRIRDLAEKKYGKVPSGDTKPNSWTLLDFGDVVIHIFLPPQRAFYNLEEFYGNATLIEL 240

Query: 241 PFENQRPF 245
           PFENQ PF
Sbjct: 241 PFENQPPF 247

[Close]

BLAST of CsGy4G007300 vs. TrEMBL
Match: tr|V4VN54|V4VN54_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10021874mg PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.5e-84
Identity = 161/245 (65.71%), Postives = 189/245 (77.14%), Query Frame = 0


Query: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60
           M  S TLSL GA +GT F  E   LG     +  +PRK +   C NG     R C W++P
Sbjct: 1   MIASATLSLAGAVSGTRFTCEFHPLGRLEAKLSHKPRKHVEWFCINGHHLLNRKCFWQIP 60

Query: 61  -SVNNFHLKSMESSPLFAVGGEAEDGFLSNMNDETDDMYDELFKKYGNVVFKSNDQKPPS 120
            S N+ + K  +    FA G +AED  LSN++++TD+M+D L KKYG VV++ NDQK P+
Sbjct: 61  RSRNSINFKPRDLPLHFAYGKDAEDSSLSNVSEDTDEMFDNLLKKYGKVVYRRNDQKSPT 120

Query: 121 AEIDNDSESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSR 180
           AEID+D+ESLSFAV+MA+V SDVKAADI+VLFVKPLVYWT FFIIATAFSRPQIDAIGSR
Sbjct: 121 AEIDDDAESLSFAVAMARVVSDVKAADIKVLFVKPLVYWTHFFIIATAFSRPQIDAIGSR 180

Query: 181 IRDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFE 240
           IRDLAEK+YG+ PSGD KPNSWTLLDFGDVV+HIFLPQQR FYNLEEFYGNAT +ELPFE
Sbjct: 181 IRDLAEKEYGKVPSGDSKPNSWTLLDFGDVVVHIFLPQQRVFYNLEEFYGNATTIELPFE 240

Query: 241 NQRPF 245
           NQ PF
Sbjct: 241 NQPPF 245

[Close]

BLAST of CsGy4G007300 vs. TrEMBL
Match: tr|A0A2K1YK83|A0A2K1YK83_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_011G142900v3 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.5e-84
Identity = 163/245 (66.53%), Postives = 188/245 (76.73%), Query Frame = 0


Query: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFP-YRNCLWRV 60
           MA+ST LS+ GAGAGT F  + +QLG     + ++PRK     C      P Y  C W+ 
Sbjct: 1   MAVSTALSIAGAGAGTRFSGDFQQLGRVETRLSQKPRKHSGWLCLYRHQLPHYYKCFWQE 60

Query: 61  PSVNNFHLKSMESSPLFAVGGEAEDGFLSNMNDETDDMYDELFKKYGNVVFKSNDQKPPS 120
                   K        A+  +++DGFLSN+ D TD+M+D+LF KYG VVF+SND KPP+
Sbjct: 61  SRTEKLSFKQS-----LALRKDSDDGFLSNVED-TDEMFDDLFNKYGKVVFRSNDNKPPT 120

Query: 121 AEIDNDSESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSR 180
           AE+D+D+ESLSFAV MAKVASDVKA+DIRVLFVKPLVYWTRFFIIATAFSRPQIDAI SR
Sbjct: 121 AEVDDDAESLSFAVEMAKVASDVKASDIRVLFVKPLVYWTRFFIIATAFSRPQIDAINSR 180

Query: 181 IRDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFE 240
           +RDLAEKKYG+ PSGD KPNSWTLLDFGDVVIHIFLP QRAFYNLEEFYGNATP+ELPFE
Sbjct: 181 MRDLAEKKYGKVPSGDTKPNSWTLLDFGDVVIHIFLPPQRAFYNLEEFYGNATPIELPFE 239

Query: 241 NQRPF 245
           NQ PF
Sbjct: 241 NQPPF 239

[Close]

BLAST of CsGy4G007300 vs. TrEMBL
Match: tr|A0A2H5QE26|A0A2H5QE26_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_220920 PE=3 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 4.4e-84
Identity = 161/245 (65.71%), Postives = 189/245 (77.14%), Query Frame = 0


Query: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60
           M  S TLSL GA +GT F  E   LG     +  +PRK +   C NG       C W++P
Sbjct: 1   MIASATLSLAGAVSGTRFSCEFHPLGRLETKLSHKPRKHVEWFCINGHHLLNCMCFWQIP 60

Query: 61  -SVNNFHLKSMESSPLFAVGGEAEDGFLSNMNDETDDMYDELFKKYGNVVFKSNDQKPPS 120
            S N+ + K  +    FA G +AED  LSN++++TD+M+D L KKYG VV++ NDQK P+
Sbjct: 61  RSRNSINFKPRDLPLHFAYGKDAEDSSLSNVSEDTDEMFDNLLKKYGKVVYRRNDQKSPA 120

Query: 121 AEIDNDSESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSR 180
           AEID+D+ESLSFAV+MAKV SDVKA+DI+VLFVKPLVYWT FFIIATAFSRPQIDAIGSR
Sbjct: 121 AEIDDDAESLSFAVAMAKVVSDVKASDIKVLFVKPLVYWTHFFIIATAFSRPQIDAIGSR 180

Query: 181 IRDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFE 240
           IRDLAEK+YG+ PSGD KPNSWTLLDFGDVV+HIFLPQQRAFYNLEEFYGNAT +ELPFE
Sbjct: 181 IRDLAEKEYGKVPSGDSKPNSWTLLDFGDVVVHIFLPQQRAFYNLEEFYGNATTIELPFE 240

Query: 241 NQRPF 245
           NQ PF
Sbjct: 241 NQPPF 245

The following BLAST results are available for this feature:

BLAST of CsGy4G007300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147757.1	7.2e-139	99.59	PREDICTED: protein Iojap, chloroplastic [Cucumis sativus] >KGN53523.1 hypothetic...	[more]
XP_023524638.1	9.4e-123	87.70	protein Iojap, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022942371.1	1.0e-121	86.89	protein Iojap, chloroplastic [Cucurbita moschata]	[more]
XP_022982446.1	8.8e-121	86.89	protein Iojap, chloroplastic [Cucurbita maxima]	[more]
XP_022136946.1	3.5e-117	85.89	protein Iojap, chloroplastic [Momordica charantia]	[more]

BLAST of CsGy4G007300 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G12930.1	1.1e-77	61.83	Lojap-related protein	[more]

BLAST of CsGy4G007300 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LDY9\|IOJAC_ARATH	2.0e-76	61.83	Protein Iojap, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IJ PE=2 SV=1	[more]
sp\|Q41822\|IOJAP_MAIZE	5.7e-55	64.78	Protein Iojap, chloroplastic OS=Zea mays OX=4577 GN=Ij PE=1 SV=1	[more]
sp\|P73658\|IOJAP_SYNY3	1.7e-14	40.59	Ribosomal silencing factor RsfS OS=Synechocystis sp. (strain PCC 6803 / Kazusa) ...	[more]
sp\|Q97P97\|IOJAP_STRPN	1.9e-10	36.52	Ribosomal silencing factor RsfS OS=Streptococcus pneumoniae serotype 4 (strain A...	[more]
sp\|Q9KD89\|IOJAP_BACHD	3.6e-09	33.33	Ribosomal silencing factor RsfS OS=Bacillus halodurans (strain ATCC BAA-125 / DS...	[more]

BLAST of CsGy4G007300 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KVG5\|A0A0A0KVG5_CUCSA	4.7e-139	99.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G064060 PE=3 SV=1	[more]
tr\|A0A1Q3B819\|A0A1Q3B819_CEPFO	1.8e-85	64.92	Oligomerisation domain-containing protein OS=Cephalotus follicularis OX=3775 GN=...	[more]
tr\|V4VN54\|V4VN54_9ROSI	1.5e-84	65.71	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10021874mg PE=3 ...	[more]
tr\|A0A2K1YK83\|A0A2K1YK83_POPTR	1.5e-84	66.53	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_011G142900v3 PE=...	[more]
tr\|A0A2H5QE26\|A0A2H5QE26_CITUN	4.4e-84	65.71	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_220920 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004394	Iojap/RsfS/C7orf30

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090071	negative regulation of ribosome biogenesis
biological_process	GO:0017148	negative regulation of translation
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0043023	ribosomal large subunit binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G007300.1	CsGy4G007300.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.30.460.10		coord: 127..242 e-value: 2.4E-25 score: 90.4
None	No IPR available	PFAM	PF02410	RsfS	coord: 135..228 e-value: 2.2E-19 score: 69.5
None	No IPR available	PANTHER	PTHR21043:SF1	PROTEIN IOJAP, CHLOROPLASTIC	coord: 80..243
None	No IPR available	SUPERFAMILY	SSF81301	Nucleotidyltransferase	coord: 129..238
IPR004394	Protein Iojap/ribosomal silencing factor RsfS	TIGRFAM	TIGR00090	TIGR00090	coord: 135..228 e-value: 1.3E-20 score: 71.4
IPR004394	Protein Iojap/ribosomal silencing factor RsfS	PANTHER	PTHR21043	IOJAP SUPERFAMILY ORTHOLOG	coord: 80..243
IPR004394	Protein Iojap/ribosomal silencing factor RsfS	HAMAP	MF_01477	Iojap_RsfS	coord: 126..229 score: 18.467

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy4G007300	Cla005416	Watermelon (97103) v1	cgybwmB289
CsGy4G007300	Csa4G064060	Cucumber (Chinese Long) v2	cgybcuB165
CsGy4G007300	MELO3C016177	Melon (DHL92) v3.5.1	cgybmeB271
CsGy4G007300	ClCG07G010660	Watermelon (Charleston Gray)	cgybwcgB302
CsGy4G007300	CSPI04G07420	Wild cucumber (PI 183967)	cgybcpiB168
CsGy4G007300	CmaCh04G006310	Cucurbita maxima (Rimu)	cgybcmaB541
CsGy4G007300	MELO3C016177.2	Melon (DHL92) v3.6.1	cgybmedB268
CsGy4G007300	CsaV3_4G007640	Cucumber (Chinese Long) v3	cgybcucB171
CsGy4G007300	Cla97C07G137410	Watermelon (97103) v2	cgybwmbB304
CsGy4G007300	Bhi01G002410	Wax gourd	cgybwgoB352

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy4G007300	Cucurbita maxima (Rimu)	cgybcmaB498
CsGy4G007300	Cucurbita moschata (Rifu)	cgybcmoB467
CsGy4G007300	Cucurbita moschata (Rifu)	cgybcmoB515
CsGy4G007300	Cucurbita pepo (Zucchini)	cgybcpeB487
CsGy4G007300	Cucurbita pepo (Zucchini)	cgybcpeB501
CsGy4G007300	Bottle gourd (USVL1VR-Ls)	cgyblsiB278
CsGy4G007300	Bottle gourd (USVL1VR-Ls)	cgyblsiB288
CsGy4G007300	Melon (DHL92) v3.5.1	cgybmeB261
CsGy4G007300	Melon (DHL92) v3.6.1	cgybmedB260
CsGy4G007300	Watermelon (Charleston Gray)	cgybwcgB300
CsGy4G007300	Watermelon (97103) v1	cgybwmB287
CsGy4G007300	Silver-seed gourd	carcgybB0047
CsGy4G007300	Silver-seed gourd	carcgybB0652
CsGy4G007300	Watermelon (97103) v2	cgybwmbB302
CsGy4G007300	Wax gourd	cgybwgoB367