CsGy4G004620 (gene) Cucumber (Gy14) v2

Overview
NameCsGy4G004620
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionsuccinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial-like
LocationChr4 : 3116056 .. 3118417 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAAAAGTAAACTAGGAGGGATCCATGTTAAAAAGGTGGTTCCGCCATGGCTACAACAAGGAGTGGAAGCAAAGGTTTGGAGTATTAGAGGCACGTCCTATGGCTAAGCAACATGCAGAAGAAGCCATGGAAGCTCATGGTGAAATAAAGAGCAACCTTGATGAATTTAATAATCGAAAGGAGTTCAAAATATATAGGTGGAATCCTCAATATCCCAACCACAAGCCTTTTCTTCACTCTTTCTTTCTCGATCTCTCTAAATGTGGTCCTATGGTACACTATATATTCCATTTCCCCCTCTCTCTCCTCCTTTCATAACGTTTCTGTTTCTGGTTTCTTTCTTGTTTTGATCTTCTGTTGCTTGTTTACACCAACATGGTTCAATAACTATTTAAGAAAATTTAGATAAAAACTTGTTTGATAACTATATCATGAGTTCCGATGTCAATTATTAACGAAAACAATATAATTATTGTTTTCTAGCATTTCAAATGCTGCTCAAATTTAATCTGCATTATTATTTCTCATTCGAGTCATTAATCCCAAATATAATTGAATCATATTATTAGGTAAATTAAATACTCCCCTTAAGTACCTTAAATTTGTACTTTGTGGTCAGTGGTTATCATGACATGCCATTTTGAATTTACATAATGTACGGAGATTGCAAAAGTACCTCGAATTTATATCATGAAGTTGGTGGTTAGTGGTTAACAGGAAATGCAATTTTTGAATGAATGTGTTGGGAGAAAAACTGCAAAAGTAGTTCGAATGTGGTGATTAGTACTGTTGATTGGGATGTTTCTAGCTTTGTACGTTGACCAGTTTGAGTGTTACGATAGTTTTTGCCTTTGATTCAAGAAATTATTCAAGATGACCTGTAATGTCAGAATGTGTTCACAGTTTTGCATACTTGGATACAACTTACAAGTATCTTGAATTTGTGTCCGGCATCTCACCACTAGATTATATTTAAGAGTGGTCTCACTCTTCTCGCATGGTGATGTTGTAGGTTTTAGATGCATTGCAGAAGATAAAAGCAGAAAAAGACTCAAGTTTGAGCTATAGAAGATCTTGTAGGGAAGGAATATGTGGATCATGTGGCATGAACATTGATGGAGCTAACACAGTTGCTTGCCTCAAACCTATTGATGCTGACACTTCCAAACCCACCATTATAACCCCTCTTCCCCATATGTTTGTCATCAAAGATCTTGTTGTTGATCTCACCAACTTCTACCAACAATACAAGTAATCTCTCTTGACCTTAAGCTTTTCGCTATCATTCAAATCTTTGTAACGTTATTCCCTTTTATGGAAAGTATTAATTTTCAATTATTATAATAATAAAATTATAAGAAATGTTTGAGGATTCCACTCTTGAAAAAATGAAGAGATGTTACAGTATCTAATCTTTATAAGATTTACACGAGACTGGGCAGATGCTTCATAGCATCTAAGGATACTGTTACTTCTTTCATTAAAAACAAATTGGTTTTTAGATGAAACTCATGCTTAACTAATATGAATTCGAAGACACTTGACATGCGTCCCAGAAATGATACTATCTTGATGTTTGAATAAAATGCATGTGTGTTTTGTCATTAAGATGATTGATTGTATGCGAGAATCATCACATTTTACTTTTCCTCTAAGCTGACTGTAGTGTGATGCATGTATATAGGTCAATCGAGCCATGGCTGAAGACTAGAAGGTCGGCAGAGGGTGGGCGAGAGTTCAGGCAATCTCCGGCAGAGAGGAAGAAACTAGATGGGTTGTACGAGTGTATTCTTTGTGCTTGTTGTAGTACTTCATGTCCTCCATATTGGTGGAATCCAGAAGAGTTTCTTGGTCCTGCTGCATTGCTCCATGCCTATAGATGGATCTCTGATAGGTAATTCAACTTTCTCGATCCCAATTTACTATAGATCTTAAGTTCAACTACCTTAGTCTATGATTGATGATGTGAGTTTTAAAAAACTTGATTAAAATGATAGTCGAGATGAGTTCAAGAAGGAACGATTGCAAGCAATAGCCGAAGACGATACAAAGCTTTATAGATGTAGAACTGTGAAGAATTGCACAGCCAACTGCCCCAAAAGCCTTGATCCTTCCTCTGCAATTCACCACATGAAGGCAATGCATTTAATCTCTAGGTCCAATAAGGTGCCCAACAATTAGCTTTTCTAGCCTTTTCTTTCTCTAAAATCCTATGGGTCATAATATATACATATATAAGCCATCTCTTTTTCTTGGTCTTGAAGTTCATTTTCAATCTTAATCTATGAAGAAATGTATTGATGATTTGTTATAATGAAAGTGGTTGTACTGGACTTTGAATAATAGATTTTCGAACCCCTG

mRNA sequence

AAGAAAAGTAAACTAGGAGGGATCCATGTTAAAAAGGTGGTTCCGCCATGGCTACAACAAGGAGTGGAAGCAAAGGTTTGGAGTATTAGAGGCACGTCCTATGGCTAAGCAACATGCAGAAGAAGCCATGGAAGCTCATGGTGAAATAAAGAGCAACCTTGATGAATTTAATAATCGAAAGGAGTTCAAAATATATAGGTGGAATCCTCAATATCCCAACCACAAGCCTTTTCTTCACTCTTTCTTTCTCGATCTCTCTAAATGTGGTCCTATGGTTTTAGATGCATTGCAGAAGATAAAAGCAGAAAAAGACTCAAGTTTGAGCTATAGAAGATCTTGTAGGGAAGGAATATGTGGATCATGTGGCATGAACATTGATGGAGCTAACACAGTTGCTTGCCTCAAACCTATTGATGCTGACACTTCCAAACCCACCATTATAACCCCTCTTCCCCATATGTTTGTCATCAAAGATCTTGTTGTTGATCTCACCAACTTCTACCAACAATACAAGTCAATCGAGCCATGGCTGAAGACTAGAAGGTCGGCAGAGGGTGGGCGAGAGTTCAGGCAATCTCCGGCAGAGAGGAAGAAACTAGATGGGTTGTACGAGTGTATTCTTTGTGCTTGTTGTAGTACTTCATGTCCTCCATATTGGTGGAATCCAGAAGAGTTTCTTGGTCCTGCTGCATTGCTCCATGCCTATAGATGGATCTCTGATAGTCGAGATGAGTTCAAGAAGGAACGATTGCAAGCAATAGCCGAAGACGATACAAAGCTTTATAGATGTAGAACTGTGAAGAATTGCACAGCCAACTGCCCCAAAAGCCTTGATCCTTCCTCTGCAATTCACCACATGAAGGCAATGCATTTAATCTCTAGGTCCAATAAGGTGCCCAACAATTAGCTTTTCTAGCCTTTTCTTTCTCTAAAATCCTATGGGTCATAATATATACATATATAAGCCATCTCTTTTTCTTGGTCTTGAAGTTCATTTTCAATCTTAATCTATGAAGAAATGTATTGATGATTTGTTATAATGAAAGTGGTTGTACTGGACTTTGAATAATAGATTTTCGAACCCCTG

Coding sequence (CDS)

ATGTTAAAAAGGTGGTTCCGCCATGGCTACAACAAGGAGTGGAAGCAAAGGTTTGGAGTATTAGAGGCACGTCCTATGGCTAAGCAACATGCAGAAGAAGCCATGGAAGCTCATGGTGAAATAAAGAGCAACCTTGATGAATTTAATAATCGAAAGGAGTTCAAAATATATAGGTGGAATCCTCAATATCCCAACCACAAGCCTTTTCTTCACTCTTTCTTTCTCGATCTCTCTAAATGTGGTCCTATGGTTTTAGATGCATTGCAGAAGATAAAAGCAGAAAAAGACTCAAGTTTGAGCTATAGAAGATCTTGTAGGGAAGGAATATGTGGATCATGTGGCATGAACATTGATGGAGCTAACACAGTTGCTTGCCTCAAACCTATTGATGCTGACACTTCCAAACCCACCATTATAACCCCTCTTCCCCATATGTTTGTCATCAAAGATCTTGTTGTTGATCTCACCAACTTCTACCAACAATACAAGTCAATCGAGCCATGGCTGAAGACTAGAAGGTCGGCAGAGGGTGGGCGAGAGTTCAGGCAATCTCCGGCAGAGAGGAAGAAACTAGATGGGTTGTACGAGTGTATTCTTTGTGCTTGTTGTAGTACTTCATGTCCTCCATATTGGTGGAATCCAGAAGAGTTTCTTGGTCCTGCTGCATTGCTCCATGCCTATAGATGGATCTCTGATAGTCGAGATGAGTTCAAGAAGGAACGATTGCAAGCAATAGCCGAAGACGATACAAAGCTTTATAGATGTAGAACTGTGAAGAATTGCACAGCCAACTGCCCCAAAAGCCTTGATCCTTCCTCTGCAATTCACCACATGAAGGCAATGCATTTAATCTCTAGGTCCAATAAGGTGCCCAACAATTAG

Protein sequence

MLKRWFRHGYNKEWKQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEFKIYRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGREFRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKERLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISRSNKVPNN
Homology
[Close]
BLAST of CsGy4G004620 vs. NCBI nr
Match: XP_004146922.1 (PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial [Cucumis sativus] >KGN53225.1 hypothetical protein Csa_4G028980 [Cucumis sativus])

HSP 1 Score: 620.2 bits (1598), Expect = 3.7e-174
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0 

Query: 1   MLKRWFRHGYNKEWKQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEFKIYRWN 60
           MLKRWFRHGYNKEWKQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEFKIYRWN
Sbjct: 1   MLKRWFRHGYNKEWKQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEFKIYRWN 60

Query: 61  PQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGA 120
           PQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGA
Sbjct: 61  PQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGA 120

Query: 121 NTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE 180
           NTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE
Sbjct: 121 NTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE 180

Query: 181 FRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKE 240
           FRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKE
Sbjct: 181 FRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKE 240

Query: 241 RLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISRSNKVPNN 294
           RLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISRSNKVPNN
Sbjct: 241 RLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISRSNKVPNN 293

[Close]
BLAST of CsGy4G004620 vs. NCBI nr
Match: XP_008454472.1 (PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial-like [Cucumis melo])

HSP 1 Score: 572.4 bits (1474), Expect = 8.8e-160
Identity = 273/293 (93.17%), Postives = 280/293 (95.56%), Query Frame = 0 

Query: 1   MLKRWFRHGYNKEWKQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEFKIYRWN 60
           MLK WFRH YNK  KQRFGVLE  PMAKQHAEEAMEAHGEIKSNL  FNN+KEFKIYRWN
Sbjct: 1   MLKSWFRHAYNKVSKQRFGVLEEHPMAKQHAEEAMEAHGEIKSNL-RFNNQKEFKIYRWN 60

Query: 61  PQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGA 120
           PQYPNHKPFLHSFFLDLSKCGPMVLDALQ IKAEKDSSLSYRRSCREGICGSC MNIDGA
Sbjct: 61  PQYPNHKPFLHSFFLDLSKCGPMVLDALQMIKAEKDSSLSYRRSCREGICGSCAMNIDGA 120

Query: 121 NTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE 180
           NTVACLKPIDADTSKPTIITPLPHM+VIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE
Sbjct: 121 NTVACLKPIDADTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE 180

Query: 181 FRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKE 240
           FRQ+PAERKKLDGLYECILCACCS SCPPYWWNPEEF+GPAALLHAYRWISDSRDEFKKE
Sbjct: 181 FRQTPAERKKLDGLYECILCACCSASCPPYWWNPEEFIGPAALLHAYRWISDSRDEFKKE 240

Query: 241 RLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISRSNKVPNN 294
           RLQAIAED TKLYRCRTV+NCTANCPKSLDPSSAIH+MKAMHLI RSNKVPN+
Sbjct: 241 RLQAIAEDKTKLYRCRTVQNCTANCPKSLDPSSAIHNMKAMHLIFRSNKVPNH 292

[Close]
BLAST of CsGy4G004620 vs. NCBI nr
Match: XP_008454471.1 (PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial [Cucumis melo])

HSP 1 Score: 567.0 bits (1460), Expect = 3.7e-158
Identity = 270/288 (93.75%), Postives = 277/288 (96.18%), Query Frame = 0 

Query: 1   MLKRWFRHGYNKEWKQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEFKIYRWN 60
           MLK WFRH YNK  K+RFGVLE  P+AKQHAEEAMEAHGEIKSNL  FNN+KEFKIYRWN
Sbjct: 1   MLKGWFRHAYNKVSKKRFGVLEEHPIAKQHAEEAMEAHGEIKSNL-RFNNQKEFKIYRWN 60

Query: 61  PQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGA 120
           PQYPNHKPFLHSFFLDLSKCGPMVLDALQ IKAEKDSSLSYRRSCREGICGSC MNIDGA
Sbjct: 61  PQYPNHKPFLHSFFLDLSKCGPMVLDALQMIKAEKDSSLSYRRSCREGICGSCAMNIDGA 120

Query: 121 NTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE 180
           NTVACLKPIDADTSKPTIITPLPHM+VIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE
Sbjct: 121 NTVACLKPIDADTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE 180

Query: 181 FRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKE 240
           FRQ+PAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFK+E
Sbjct: 181 FRQTPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKEE 240

Query: 241 RLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISRSN 289
           RLQAIAED+TKLYRCRTVKNCTA CPKSLDPSSAIHHMKAMHLISRSN
Sbjct: 241 RLQAIAEDETKLYRCRTVKNCTATCPKSLDPSSAIHHMKAMHLISRSN 287

[Close]
BLAST of CsGy4G004620 vs. NCBI nr
Match: XP_022136428.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial [Momordica charantia])

HSP 1 Score: 509.2 bits (1310), Expect = 9.2e-141
Identity = 240/288 (83.33%), Postives = 258/288 (89.58%), Query Frame = 0 

Query: 1   MLKRWFRHGYNKEWKQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEFKIYRWN 60
           MLK W RHGYNK  K +FG LE  P A+QHA EAMEAHGE++  L   +++KEFKIYRWN
Sbjct: 1   MLKSWSRHGYNKVAKSKFGALEGHPAAQQHAAEAMEAHGEVQRKLK--SHQKEFKIYRWN 60

Query: 61  PQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGA 120
           P+YPN KPFL SFF+ LS CGPMVLDALQKIKAE+DSSLSYRRSCREGICGSC MNIDG 
Sbjct: 61  PEYPNRKPFLQSFFVQLSNCGPMVLDALQKIKAEEDSSLSYRRSCREGICGSCAMNIDGG 120

Query: 121 NTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE 180
           NTVACLK IDADTSKPTIITPLPHMFVIKDLVVDLTNFY QYKSIEPWLKT+R  E GRE
Sbjct: 121 NTVACLKLIDADTSKPTIITPLPHMFVIKDLVVDLTNFYHQYKSIEPWLKTKRLPEDGRE 180

Query: 181 FRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKE 240
           F+QSP +RKKLDGLYECILCACC+TSCPPYWWNPEEFLGPAALLHAYRWISDSRD+F++E
Sbjct: 181 FKQSPVQRKKLDGLYECILCACCTTSCPPYWWNPEEFLGPAALLHAYRWISDSRDDFEEE 240

Query: 241 RLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISRSN 289
           RLQAIAED TKLYRCRTVKNCTANCPKSLDPS AIH MKAMHLIS+SN
Sbjct: 241 RLQAIAEDKTKLYRCRTVKNCTANCPKSLDPSGAIHQMKAMHLISKSN 286

[Close]
BLAST of CsGy4G004620 vs. NCBI nr
Match: XP_022942066.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial [Cucurbita moschata])

HSP 1 Score: 502.7 bits (1293), Expect = 8.6e-139
Identity = 238/293 (81.23%), Postives = 260/293 (88.74%), Query Frame = 0 

Query: 1   MLKRWFRHGYNK-----EWKQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEFK 60
           ML+ WFR+ Y+K        Q+FGVL+  P A+QHA+EAMEAH + KS      N+KEF+
Sbjct: 1   MLRTWFRNAYSKAVPKPAANQKFGVLDGHPAAQQHAQEAMEAHTKFKS------NQKEFR 60

Query: 61  IYRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGM 120
           +YRW+P++PNHKPFL SFF+DLSKCG MVLDALQKIKAE+DSSLSYRRSCREGICGSC M
Sbjct: 61  VYRWSPEHPNHKPFLQSFFIDLSKCGSMVLDALQKIKAEEDSSLSYRRSCREGICGSCAM 120

Query: 121 NIDGANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSA 180
           NIDGANTVACLKPID DTSKPTIITPLPHMFVIKDL VDLTNFYQQYKSIEPWLKT+R  
Sbjct: 121 NIDGANTVACLKPIDTDTSKPTIITPLPHMFVIKDLAVDLTNFYQQYKSIEPWLKTKRLP 180

Query: 181 EGGREFRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRD 240
           + GREFRQSPAER+KLDGLYECILCACCS SCPPYWWNPEEFLGPAALLHA RWISDSRD
Sbjct: 181 KDGREFRQSPAERRKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHACRWISDSRD 240

Query: 241 EFKKERLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISRSN 289
           EFKKERLQAIAED+TKLYRCRTV+NCTANCPKSLDPS AIHHMKAMHL+SR N
Sbjct: 241 EFKKERLQAIAEDETKLYRCRTVQNCTANCPKSLDPSGAIHHMKAMHLLSRDN 287

[Close]
BLAST of CsGy4G004620 vs. TAIR10
Match: AT5G65165.1 (succinate dehydrogenase 2-3)

HSP 1 Score: 412.1 bits (1058), Expect = 2.8e-115
Identity = 192/269 (71.38%), Postives = 222/269 (82.53%), Query Frame = 0 

Query: 18  FGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNN-RKEFKIYRWNPQYPNHKPFLHSFFLD 77
           F +L     A+  +++ +++    K    +    +KEFKIYRWNP  PN KPFL SFF+D
Sbjct: 32  FPILNGHKAAQDLSKDTLKSQDITKEKEGQHKEVKKEFKIYRWNPDKPNSKPFLQSFFVD 91

Query: 78  LSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGANTVACLKPIDADTSKP 137
           LS CGPMVLD LQKIKAE D+SLSYRRSCREGICGSC MNIDG NTVACLKPI+ +TSKP
Sbjct: 92  LSSCGPMVLDVLQKIKAEDDASLSYRRSCREGICGSCSMNIDGTNTVACLKPINPNTSKP 151

Query: 138 TIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGREFRQSPAERKKLDGLYE 197
           TIITPLPHM+VIKDLVVDLTNFYQQYKS+EPWLKTR+  + GRE RQSP +RKKLDGLYE
Sbjct: 152 TIITPLPHMYVIKDLVVDLTNFYQQYKSMEPWLKTRKPPKDGREHRQSPKDRKKLDGLYE 211

Query: 198 CILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKERLQAIAEDDTKLYRCR 257
           CILCACC+TSCP YWWNPEEF GPAALL AYRWISDSRDE+++ERLQAI E +TK+YRCR
Sbjct: 212 CILCACCTTSCPSYWWNPEEFPGPAALLQAYRWISDSRDEYREERLQAITESETKVYRCR 271

Query: 258 TVKNCTANCPKSLDPSSAIHHMKAMHLIS 286
            +KNCTA CPK L+P+SAI  MK+ HL+S
Sbjct: 272 AIKNCTATCPKGLNPASAILKMKSKHLLS 300

[Close]
BLAST of CsGy4G004620 vs. TAIR10
Match: AT5G40650.1 (succinate dehydrogenase 2-2)

HSP 1 Score: 323.6 bits (828), Expect = 1.3e-88
Identity = 156/231 (67.53%), Postives = 178/231 (77.06%), Query Frame = 0 

Query: 52  KEFKIYRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICG 111
           K F+IYRWNP  P  KP L  + +DL  CGPMVLDAL KIK E D SL++RRSCREGICG
Sbjct: 49  KTFQIYRWNPDNPG-KPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICG 108

Query: 112 SCGMNIDGANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKT 171
           SC MNIDG N +ACL  I++  SK T ITPLPHMFVIKDLVVD+TNFY QYKSIEPWLK 
Sbjct: 109 SCAMNIDGCNGLACLTKIESG-SKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 168

Query: 172 RRSAE-GGREFRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWI 231
           +  A   G+E  QS  +R KLDG+YECILCACCSTSCP YWWNPE +LGPAALLHA RWI
Sbjct: 169 KNPASVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWI 228

Query: 232 SDSRDEFKKERLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAM 282
           SDSRDE+ KERL+AI +D+ KLYRC T+ NC   CPK L+P   I H+K +
Sbjct: 229 SDSRDEYTKERLEAI-DDEFKLYRCHTILNCARACPKGLNPGKQITHIKQL 276

[Close]
BLAST of CsGy4G004620 vs. TAIR10
Match: AT3G27380.1 (succinate dehydrogenase 2-1)

HSP 1 Score: 321.2 bits (822), Expect = 6.4e-88
Identity = 160/260 (61.54%), Postives = 186/260 (71.54%), Query Frame = 0 

Query: 23  ARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEFKIYRWNPQYPNHKPFLHSFFLDLSKCGP 82
           AR +  +      EA  +  S     +N K F+IYRWNP  P  KP L ++ +DL  CGP
Sbjct: 21  ARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYRWNPDNPG-KPELQNYQIDLKDCGP 80

Query: 83  MVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGANTVACLKPIDADTSKPTIITPL 142
           MVLDAL KIK E D SL++RRSCREGICGSC MNIDG N +ACL  I  D +  T ITPL
Sbjct: 81  MVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIQ-DEASETTITPL 140

Query: 143 PHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSAE-GGREFRQSPAERKKLDGLYECILCA 202
           PHMFVIKDLVVD+TNFY QYKSIEPWLK +  A    +E  QS  +R KLDG+YECILCA
Sbjct: 141 PHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAKEILQSKKDRAKLDGMYECILCA 200

Query: 203 CCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKERLQAIAEDDTKLYRCRTVKNC 262
           CCSTSCP YWWNPE +LGPAALLHA RWISDSRDE+ KERL+AI +D+ KLYRC T+ NC
Sbjct: 201 CCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAI-DDEFKLYRCHTILNC 260

Query: 263 TANCPKSLDPSSAIHHMKAM 282
              CPK L+P   I H+K +
Sbjct: 261 ARACPKGLNPGKQITHIKQL 277

[Close]
BLAST of CsGy4G004620 vs. Swiss-Prot
Match: sp|Q9FJP9|SDHB3_ARATH (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH2-3 PE=1 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 5.0e-114
Identity = 192/269 (71.38%), Postives = 222/269 (82.53%), Query Frame = 0 

Query: 18  FGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNN-RKEFKIYRWNPQYPNHKPFLHSFFLD 77
           F +L     A+  +++ +++    K    +    +KEFKIYRWNP  PN KPFL SFF+D
Sbjct: 32  FPILNGHKAAQDLSKDTLKSQDITKEKEGQHKEVKKEFKIYRWNPDKPNSKPFLQSFFVD 91

Query: 78  LSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGANTVACLKPIDADTSKP 137
           LS CGPMVLD LQKIKAE D+SLSYRRSCREGICGSC MNIDG NTVACLKPI+ +TSKP
Sbjct: 92  LSSCGPMVLDVLQKIKAEDDASLSYRRSCREGICGSCSMNIDGTNTVACLKPINPNTSKP 151

Query: 138 TIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGREFRQSPAERKKLDGLYE 197
           TIITPLPHM+VIKDLVVDLTNFYQQYKS+EPWLKTR+  + GRE RQSP +RKKLDGLYE
Sbjct: 152 TIITPLPHMYVIKDLVVDLTNFYQQYKSMEPWLKTRKPPKDGREHRQSPKDRKKLDGLYE 211

Query: 198 CILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKERLQAIAEDDTKLYRCR 257
           CILCACC+TSCP YWWNPEEF GPAALL AYRWISDSRDE+++ERLQAI E +TK+YRCR
Sbjct: 212 CILCACCTTSCPSYWWNPEEFPGPAALLQAYRWISDSRDEYREERLQAITESETKVYRCR 271

Query: 258 TVKNCTANCPKSLDPSSAIHHMKAMHLIS 286
            +KNCTA CPK L+P+SAI  MK+ HL+S
Sbjct: 272 AIKNCTATCPKGLNPASAILKMKSKHLLS 300

[Close]
BLAST of CsGy4G004620 vs. Swiss-Prot
Match: sp|Q6H4G3|SDHB2_ORYSJ (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SDH2-2 PE=1 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 5.0e-98
Identity = 166/285 (58.25%), Postives = 209/285 (73.33%), Query Frame = 0 

Query: 18  FGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNR---------------KEFKIYRWNPQ 77
           F  L   P A+ +A +A E    + +  +E  +                KEF++YRW+P 
Sbjct: 26  FPSLRGHPAARANARDAAEKQAALAAKEEEIRDHRRGDAAAASPAPSTVKEFRVYRWSPD 85

Query: 78  YPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGANT 137
            P+ +P L S+ +DL+ CGPMVLD LQKIKAE D++L++RRSCREGICGSC M IDG NT
Sbjct: 86  APSRRPHLQSYHVDLATCGPMVLDVLQKIKAEHDATLAFRRSCREGICGSCSMCIDGVNT 145

Query: 138 VACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTR-RSAEGGREF 197
           VACL+P+D DTS  T +TPLPHM+V++DLVVDLT+FYQQYKS+EPWLK + ++     E 
Sbjct: 146 VACLRPVDTDTSSATTVTPLPHMYVVRDLVVDLTSFYQQYKSVEPWLKRKTKTKTETTEH 205

Query: 198 RQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKER 257
            QSP ERK+LDGLYECILCACCS +CP YWWN E FLGPAALLHAYRW+SDSRDE+  ER
Sbjct: 206 AQSPEERKRLDGLYECILCACCSAACPSYWWNAEAFLGPAALLHAYRWVSDSRDEYAAER 265

Query: 258 LQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISR 287
           +QA+AE   KLYRCR +K+CTA CPKSLDP++AI  MK +H + +
Sbjct: 266 VQALAEGWDKLYRCRMIKSCTATCPKSLDPAAAISAMKTLHQLGK 310

[Close]
BLAST of CsGy4G004620 vs. Swiss-Prot
Match: sp|Q8LB02|SDHB2_ARATH (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH2-2 PE=1 SV=2)

HSP 1 Score: 323.6 bits (828), Expect = 2.3e-87
Identity = 156/231 (67.53%), Postives = 178/231 (77.06%), Query Frame = 0 

Query: 52  KEFKIYRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICG 111
           K F+IYRWNP  P  KP L  + +DL  CGPMVLDAL KIK E D SL++RRSCREGICG
Sbjct: 49  KTFQIYRWNPDNPG-KPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICG 108

Query: 112 SCGMNIDGANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKT 171
           SC MNIDG N +ACL  I++  SK T ITPLPHMFVIKDLVVD+TNFY QYKSIEPWLK 
Sbjct: 109 SCAMNIDGCNGLACLTKIESG-SKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 168

Query: 172 RRSAE-GGREFRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWI 231
           +  A   G+E  QS  +R KLDG+YECILCACCSTSCP YWWNPE +LGPAALLHA RWI
Sbjct: 169 KNPASVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWI 228

Query: 232 SDSRDEFKKERLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAM 282
           SDSRDE+ KERL+AI +D+ KLYRC T+ NC   CPK L+P   I H+K +
Sbjct: 229 SDSRDEYTKERLEAI-DDEFKLYRCHTILNCARACPKGLNPGKQITHIKQL 276

[Close]
BLAST of CsGy4G004620 vs. Swiss-Prot
Match: sp|Q9S827|SDHB1_ORYSJ (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SDH2-1 PE=1 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 5.2e-87
Identity = 153/235 (65.11%), Postives = 182/235 (77.45%), Query Frame = 0 

Query: 50  NRKEFKIYRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGI 109
           N K F IYRW+P  P+ KP L  + +DLS CGPMVLD L KIK E+D SL++RRSCREGI
Sbjct: 47  NTKTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDVLLKIKNEQDPSLTFRRSCREGI 106

Query: 110 CGSCGMNIDGANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWL 169
           CGSC MNIDG N +ACL  I + +S  T I+PLPHMFVIKDLVVD+TNFY QYKS+EPWL
Sbjct: 107 CGSCAMNIDGDNGLACLTKISSASSAST-ISPLPHMFVIKDLVVDMTNFYNQYKSVEPWL 166

Query: 170 KTRRS-AEGGREFRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYR 229
           K + +  + G+E  Q+ A+R KLDG+YECILCACCSTSCP YWWNPEE+LGPAALLHA R
Sbjct: 167 KRKDAPPQPGKEIPQTKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANR 226

Query: 230 WISDSRDEFKKERLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHL 284
           WI DSRD+F KERL +I  D+ KLYRC T+KNCT  CPK L+P+  I  +K + L
Sbjct: 227 WIQDSRDQFTKERLDSI-NDEFKLYRCHTIKNCTHACPKGLNPAKHIDTIKKLQL 279

[Close]
BLAST of CsGy4G004620 vs. Swiss-Prot
Match: sp|Q8LBZ7|SDHB1_ARATH (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH2-1 PE=1 SV=2)

HSP 1 Score: 321.2 bits (822), Expect = 1.2e-86
Identity = 160/260 (61.54%), Postives = 186/260 (71.54%), Query Frame = 0 

Query: 23  ARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEFKIYRWNPQYPNHKPFLHSFFLDLSKCGP 82
           AR +  +      EA  +  S     +N K F+IYRWNP  P  KP L ++ +DL  CGP
Sbjct: 21  ARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYRWNPDNPG-KPELQNYQIDLKDCGP 80

Query: 83  MVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGANTVACLKPIDADTSKPTIITPL 142
           MVLDAL KIK E D SL++RRSCREGICGSC MNIDG N +ACL  I  D +  T ITPL
Sbjct: 81  MVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIQ-DEASETTITPL 140

Query: 143 PHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSAE-GGREFRQSPAERKKLDGLYECILCA 202
           PHMFVIKDLVVD+TNFY QYKSIEPWLK +  A    +E  QS  +R KLDG+YECILCA
Sbjct: 141 PHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAKEILQSKKDRAKLDGMYECILCA 200

Query: 203 CCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKERLQAIAEDDTKLYRCRTVKNC 262
           CCSTSCP YWWNPE +LGPAALLHA RWISDSRDE+ KERL+AI +D+ KLYRC T+ NC
Sbjct: 201 CCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAI-DDEFKLYRCHTILNC 260

Query: 263 TANCPKSLDPSSAIHHMKAM 282
              CPK L+P   I H+K +
Sbjct: 261 ARACPKGLNPGKQITHIKQL 277

[Close]
BLAST of CsGy4G004620 vs. TrEMBL
Match: tr|A0A0A0KUA7|A0A0A0KUA7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G028980 PE=4 SV=1)

HSP 1 Score: 620.2 bits (1598), Expect = 2.4e-174
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0 

Query: 1   MLKRWFRHGYNKEWKQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEFKIYRWN 60
           MLKRWFRHGYNKEWKQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEFKIYRWN
Sbjct: 1   MLKRWFRHGYNKEWKQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEFKIYRWN 60

Query: 61  PQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGA 120
           PQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGA
Sbjct: 61  PQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGA 120

Query: 121 NTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE 180
           NTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE
Sbjct: 121 NTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE 180

Query: 181 FRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKE 240
           FRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKE
Sbjct: 181 FRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKE 240

Query: 241 RLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISRSNKVPNN 294
           RLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISRSNKVPNN
Sbjct: 241 RLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISRSNKVPNN 293

[Close]
BLAST of CsGy4G004620 vs. TrEMBL
Match: tr|A0A1S3BY85|A0A1S3BY85_CUCME (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103494868 PE=4 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 5.8e-160
Identity = 273/293 (93.17%), Postives = 280/293 (95.56%), Query Frame = 0 

Query: 1   MLKRWFRHGYNKEWKQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEFKIYRWN 60
           MLK WFRH YNK  KQRFGVLE  PMAKQHAEEAMEAHGEIKSNL  FNN+KEFKIYRWN
Sbjct: 1   MLKSWFRHAYNKVSKQRFGVLEEHPMAKQHAEEAMEAHGEIKSNL-RFNNQKEFKIYRWN 60

Query: 61  PQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGA 120
           PQYPNHKPFLHSFFLDLSKCGPMVLDALQ IKAEKDSSLSYRRSCREGICGSC MNIDGA
Sbjct: 61  PQYPNHKPFLHSFFLDLSKCGPMVLDALQMIKAEKDSSLSYRRSCREGICGSCAMNIDGA 120

Query: 121 NTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE 180
           NTVACLKPIDADTSKPTIITPLPHM+VIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE
Sbjct: 121 NTVACLKPIDADTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE 180

Query: 181 FRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKE 240
           FRQ+PAERKKLDGLYECILCACCS SCPPYWWNPEEF+GPAALLHAYRWISDSRDEFKKE
Sbjct: 181 FRQTPAERKKLDGLYECILCACCSASCPPYWWNPEEFIGPAALLHAYRWISDSRDEFKKE 240

Query: 241 RLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISRSNKVPNN 294
           RLQAIAED TKLYRCRTV+NCTANCPKSLDPSSAIH+MKAMHLI RSNKVPN+
Sbjct: 241 RLQAIAEDKTKLYRCRTVQNCTANCPKSLDPSSAIHNMKAMHLIFRSNKVPNH 292

[Close]
BLAST of CsGy4G004620 vs. TrEMBL
Match: tr|A0A1S3BZX5|A0A1S3BZX5_CUCME (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494867 PE=4 SV=1)

HSP 1 Score: 567.0 bits (1460), Expect = 2.5e-158
Identity = 270/288 (93.75%), Postives = 277/288 (96.18%), Query Frame = 0 

Query: 1   MLKRWFRHGYNKEWKQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEFKIYRWN 60
           MLK WFRH YNK  K+RFGVLE  P+AKQHAEEAMEAHGEIKSNL  FNN+KEFKIYRWN
Sbjct: 1   MLKGWFRHAYNKVSKKRFGVLEEHPIAKQHAEEAMEAHGEIKSNL-RFNNQKEFKIYRWN 60

Query: 61  PQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGA 120
           PQYPNHKPFLHSFFLDLSKCGPMVLDALQ IKAEKDSSLSYRRSCREGICGSC MNIDGA
Sbjct: 61  PQYPNHKPFLHSFFLDLSKCGPMVLDALQMIKAEKDSSLSYRRSCREGICGSCAMNIDGA 120

Query: 121 NTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE 180
           NTVACLKPIDADTSKPTIITPLPHM+VIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE
Sbjct: 121 NTVACLKPIDADTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE 180

Query: 181 FRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKE 240
           FRQ+PAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFK+E
Sbjct: 181 FRQTPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKEE 240

Query: 241 RLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISRSN 289
           RLQAIAED+TKLYRCRTVKNCTA CPKSLDPSSAIHHMKAMHLISRSN
Sbjct: 241 RLQAIAEDETKLYRCRTVKNCTATCPKSLDPSSAIHHMKAMHLISRSN 287

[Close]
BLAST of CsGy4G004620 vs. TrEMBL
Match: tr|B9T7U2|B9T7U2_RICCO (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Ricinus communis OX=3988 GN=RCOM_0325190 PE=3 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 4.0e-124
Identity = 208/293 (70.99%), Postives = 243/293 (82.94%), Query Frame = 0 

Query: 3   KRWFRHGYNKEWK---------QRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKE 62
           + W RHGYNK  +         Q F +L+  P+ +QHA+E++E +G ++ N+ +    KE
Sbjct: 9   RSWLRHGYNKIARMLGKQDPKDQNFPILKGHPVGQQHAQESVETYGTVQDNIKKL--IKE 68

Query: 63  FKIYRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSC 122
           F++YRW+P  PN+KPFL S+F+DLS CGPMVLDALQKIKAE DSSLSYRRSCREGICGSC
Sbjct: 69  FRVYRWSPDNPNNKPFLQSYFIDLSSCGPMVLDALQKIKAEDDSSLSYRRSCREGICGSC 128

Query: 123 GMNIDGANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRR 182
            MNIDG NTVACLKPIDADTS+PTIITPLPHM+VIKDLVVDLTNFY QY+SIEPWLKTR+
Sbjct: 129 SMNIDGTNTVACLKPIDADTSRPTIITPLPHMYVIKDLVVDLTNFYNQYRSIEPWLKTRK 188

Query: 183 SAEGGREFRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDS 242
             E GRE+RQSPA+RKKLDGLYECILCACCS SCP YWWNPEEFLGPA L+HAYRWISDS
Sbjct: 189 KPEDGREYRQSPADRKKLDGLYECILCACCSASCPSYWWNPEEFLGPAPLIHAYRWISDS 248

Query: 243 RDEFKKERLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISR 287
           RD+F  ERLQA+ ED  +LYRCRT+KNCTA CPKSL+P+ AIH MK  HL+S+
Sbjct: 249 RDDFTDERLQALTEDQKRLYRCRTIKNCTATCPKSLNPADAIHKMKTKHLLSQ 299

[Close]
BLAST of CsGy4G004620 vs. TrEMBL
Match: tr|A0A2C9URG3|A0A2C9URG3_MANES (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Manihot esculenta OX=3983 GN=MANES_13G091700 PE=3 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 4.0e-124
Identity = 213/293 (72.70%), Postives = 241/293 (82.25%), Query Frame = 0 

Query: 3   KRWFRHGYNKE----WKQ-----RFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKE 62
           + W RHGYNK     WKQ      F +LE     +QHA+E+++ +  +K N+ +    KE
Sbjct: 5   RSWLRHGYNKVARMLWKQNPSNENFPILEGHFAGQQHAQESIQTYETVKDNIKKL--IKE 64

Query: 63  FKIYRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSC 122
           F+IYRWNP  PN+KPFL SF++DLS CGPMVLDALQKIKAE DSSLSYRRSCREGICGSC
Sbjct: 65  FRIYRWNPDNPNNKPFLQSFYIDLSTCGPMVLDALQKIKAEDDSSLSYRRSCREGICGSC 124

Query: 123 GMNIDGANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRR 182
            MNIDG NTVACLKPIDADTSKPT+ITPLPHMFVIKDLVVDLTNFY QY+SIEPWLKTR+
Sbjct: 125 AMNIDGTNTVACLKPIDADTSKPTVITPLPHMFVIKDLVVDLTNFYNQYRSIEPWLKTRK 184

Query: 183 SAEGGREFRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDS 242
             E GRE+RQSP +RKKLDGLYECILCACCS SCP YWWNPEEFLGPA L+HAYRWISDS
Sbjct: 185 KPEDGREYRQSPEDRKKLDGLYECILCACCSASCPSYWWNPEEFLGPAPLIHAYRWISDS 244

Query: 243 RDEFKKERLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISR 287
           RDE+  ERLQA+AED  KLYRCRT+KNCTA CPKSL+P+ AIH MK  HL+S+
Sbjct: 245 RDEYGDERLQALAEDMKKLYRCRTIKNCTATCPKSLNPADAIHKMKTKHLVSQ 295

The following BLAST results are available for this feature:
BLAST of CsGy4G004620 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146922.13.7e-174100.00PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochond... [more]
XP_008454472.18.8e-16093.17PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochond... [more]
XP_008454471.13.7e-15893.75PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochond... [more]
XP_022136428.19.2e-14183.33succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial [Momor... [more]
XP_022942066.18.6e-13981.23succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial [Cucur... [more]
BLAST of CsGy4G004620 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G65165.12.8e-11571.38succinate dehydrogenase 2-3[more]
AT5G40650.11.3e-8867.53succinate dehydrogenase 2-2[more]
AT3G27380.16.4e-8861.54succinate dehydrogenase 2-1[more]
BLAST of CsGy4G004620 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FJP9|SDHB3_ARATH5.0e-11471.38Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial OS=Ara... [more]
sp|Q6H4G3|SDHB2_ORYSJ5.0e-9858.25Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Ory... [more]
sp|Q8LB02|SDHB2_ARATH2.3e-8767.53Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Ara... [more]
sp|Q9S827|SDHB1_ORYSJ5.2e-8765.11Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Ory... [more]
sp|Q8LBZ7|SDHB1_ARATH1.2e-8661.54Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Ara... [more]
BLAST of CsGy4G004620 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KUA7|A0A0A0KUA7_CUCSA2.4e-174100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G028980 PE=4 SV=1[more]
tr|A0A1S3BY85|A0A1S3BY85_CUCME5.8e-16093.17succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial-like O... [more]
tr|A0A1S3BZX5|A0A1S3BZX5_CUCME2.5e-15893.75succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial OS=Cuc... [more]
tr|B9T7U2|B9T7U2_RICCO4.0e-12470.99Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Ricin... [more]
tr|A0A2C9URG3|A0A2C9URG3_MANES4.0e-12472.70Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Manih... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:00515372 iron, 2 sulfur cluster binding
GO:0009055electron carrier activity
GO:0051536iron-sulfur cluster binding
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006099tricarboxylic acid cycle
Vocabulary: INTERPRO
TermDefinition
IPR0360102Fe-2S_ferredoxin-like_sf
IPR0178964Fe4S_Fe-S-bd
IPR0060582Fe2S_fd_BS
IPR0179004Fe4S_Fe_S_CS
IPR025192Succ_DH/fum_Rdtase_N
IPR009051Helical_ferredxn
IPR004489Succ_DH/fum_Rdtase_Fe-S
IPR012675Beta-grasp_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0022900 electron transport chain
biological_process GO:0006099 tricarboxylic acid cycle
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0045273 respiratory chain complex II
cellular_component GO:0005575 cellular_component
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0051538 3 iron, 4 sulfur cluster binding
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008177 succinate dehydrogenase (ubiquinone) activity
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0016491 oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G004620.1CsGy4G004620.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 31..51
NoneNo IPR availablePFAMPF13534Fer4_17coord: 196..270
e-value: 3.3E-8
score: 33.9
NoneNo IPR availablePANTHERPTHR11921:SF23SUCCINATE DEHYDROGENASE UBIQUINONE IRON-SULFUR SUBUNIT 3, MITOCHONDRIALcoord: 11..285
NoneNo IPR availablePANTHERPTHR11921SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEINcoord: 11..285
IPR012675Beta-grasp domain superfamilyGENE3DG3DSA:3.10.20.30coord: 42..154
e-value: 1.2E-41
score: 143.1
IPR004489Succinate dehydrogenase/fumarate reductase iron-sulphur proteinTIGRFAMTIGR00384TIGR00384coord: 56..279
e-value: 1.0E-79
score: 265.0
IPR009051Alpha-helical ferredoxinGENE3DG3DSA:1.10.1060.10coord: 155..290
e-value: 4.1E-54
score: 184.0
IPR009051Alpha-helical ferredoxinSUPERFAMILYSSF46548alpha-helical ferredoxincoord: 156..282
IPR025192Succinate dehydogenase/fumarate reductase N-terminalPFAMPF13085Fer2_3coord: 54..159
e-value: 1.3E-29
score: 102.3
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved sitePROSITEPS001984FE4S_FER_1coord: 197..208
IPR0060582Fe-2S ferredoxin, iron-sulphur binding sitePROSITEPS001972FE2S_FER_1coord: 105..113
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainPROSITEPS513794FE4S_FER_2coord: 187..217
score: 7.466
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILYSSF542922Fe-2S ferredoxin-likecoord: 52..154