CmoCh04G008620 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G008620
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionSuccinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial (1.3.5.1)
LocationCmo_Chr04 : 4306193 .. 4307232 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCAAATTCACAAAGGAGAGAGTATGTTACGAACCTGGTTCCGCAATGCCTACAGCAAGGCCGTCCCTAAGCCGGCGGCAAACCAGAAGTTTGGAGTACTGGACGGCCATCCTGCGGCTCAGCAACATGCACAAGAAGCCATGGAAGCCCATACCAAATTTAAATCCAATCAAAAGGAGTTCAGAGTGTATCGGTGGAGTCCTGAGCACCCCAACCACAAGCCTTTCCTTCAGTCTTTCTTCATTGATCTCTCTAAATGTGGCTCAATGGTATTGCATCATTTAATCTTCATATAACCAAGGTTGGTTGGTTGGTTGATTTATTGGGTAGCTTTATTTTAGGTATTGGATGCGTTACAGAAGATAAAAGCAGAGGAAGACTCAAGCTTGAGCTACAGAAGGTCTTGTAGGGAAGGTATATGCGGATCATGTGCTATGAACATCGATGGAGCCAACACTGTGGCTTGCCTCAAACCTATTGATACTGACACTTCCAAACCCACCATTATAACGCCCCTTCCCCATATGTTTGTCATCAAGGATCTTGCTGTTGATCTCACCAATTTCTATCAGCAATACAAGTAATGTCATCCAATTTTTTGTTCTATATGGAACACAAATACAAGTGATCTAATACAAGCATTACCCTTTATGTATAGGTCGATCGAGCCATGGTTGAAGACCAAAAGGTTGCCGAAGGATGGGCGAGAGTTCAGGCAATCACCAGCGGAAAGGAGGAAGCTGGATGGGTTGTATGAGTGTATTCTGTGCGCTTGTTGCAGTGCTTCATGCCCTCCATATTGGTGGAATCCAGAGGAGTTTCTTGGCCCTGCTGCCTTGCTCCATGCCTGTCGATGGATCTCTGATAGTCGAGATGAGTTCAAGAAGGAACGACTGCAAGCAATAGCTGAAGACGAGACGAAGCTGTATAGATGTAGAACTGTACAGAATTGCACAGCCAACTGCCCCAAAAGCCTCGATCCTTCCGGTGCCATTCACCACATGAAGGCTATGCATTTGCTCTCAAGGGACAACAATTAG

mRNA sequence

ACCAAATTCACAAAGGAGAGAGTATGTTACGAACCTGGTTCCGCAATGCCTACAGCAAGGCCGTCCCTAAGCCGGCGGCAAACCAGAAGTTTGGAGTACTGGACGGCCATCCTGCGGCTCAGCAACATGCACAAGAAGCCATGGAAGCCCATACCAAATTTAAATCCAATCAAAAGGAGTTCAGAGTGTATCGGTGGAGTCCTGAGCACCCCAACCACAAGCCTTTCCTTCAGTCTTTCTTCATTGATCTCTCTAAATGTGGCTCAATGGTATTGGATGCGTTACAGAAGATAAAAGCAGAGGAAGACTCAAGCTTGAGCTACAGAAGGTCTTGTAGGGAAGGTATATGCGGATCATGTGCTATGAACATCGATGGAGCCAACACTGTGGCTTGCCTCAAACCTATTGATACTGACACTTCCAAACCCACCATTATAACGCCCCTTCCCCATATGTTTGTCATCAAGGATCTTGCTGTTGATCTCACCAATTTCTATCAGCAATACAAGTCGATCGAGCCATGGTTGAAGACCAAAAGGTTGCCGAAGGATGGGCGAGAGTTCAGGCAATCACCAGCGGAAAGGAGGAAGCTGGATGGGTTGTATGAGTGTATTCTGTGCGCTTGTTGCAGTGCTTCATGCCCTCCATATTGGTGGAATCCAGAGGAGTTTCTTGGCCCTGCTGCCTTGCTCCATGCCTGTCGATGGATCTCTGATAGTCGAGATGAGTTCAAGAAGGAACGACTGCAAGCAATAGCTGAAGACGAGACGAAGCTGTATAGATGTAGAACTGTACAGAATTGCACAGCCAACTGCCCCAAAAGCCTCGATCCTTCCGGTGCCATTCACCACATGAAGGCTATGCATTTGCTCTCAAGGGACAACAATTAG

Coding sequence (CDS)

ATGTTACGAACCTGGTTCCGCAATGCCTACAGCAAGGCCGTCCCTAAGCCGGCGGCAAACCAGAAGTTTGGAGTACTGGACGGCCATCCTGCGGCTCAGCAACATGCACAAGAAGCCATGGAAGCCCATACCAAATTTAAATCCAATCAAAAGGAGTTCAGAGTGTATCGGTGGAGTCCTGAGCACCCCAACCACAAGCCTTTCCTTCAGTCTTTCTTCATTGATCTCTCTAAATGTGGCTCAATGGTATTGGATGCGTTACAGAAGATAAAAGCAGAGGAAGACTCAAGCTTGAGCTACAGAAGGTCTTGTAGGGAAGGTATATGCGGATCATGTGCTATGAACATCGATGGAGCCAACACTGTGGCTTGCCTCAAACCTATTGATACTGACACTTCCAAACCCACCATTATAACGCCCCTTCCCCATATGTTTGTCATCAAGGATCTTGCTGTTGATCTCACCAATTTCTATCAGCAATACAAGTCGATCGAGCCATGGTTGAAGACCAAAAGGTTGCCGAAGGATGGGCGAGAGTTCAGGCAATCACCAGCGGAAAGGAGGAAGCTGGATGGGTTGTATGAGTGTATTCTGTGCGCTTGTTGCAGTGCTTCATGCCCTCCATATTGGTGGAATCCAGAGGAGTTTCTTGGCCCTGCTGCCTTGCTCCATGCCTGTCGATGGATCTCTGATAGTCGAGATGAGTTCAAGAAGGAACGACTGCAAGCAATAGCTGAAGACGAGACGAAGCTGTATAGATGTAGAACTGTACAGAATTGCACAGCCAACTGCCCCAAAAGCCTCGATCCTTCCGGTGCCATTCACCACATGAAGGCTATGCATTTGCTCTCAAGGGACAACAATTAG
Homology
[Close]
BLAST of CmoCh04G008620 vs. Swiss-Prot
Match: SDHB3_ARATH (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial OS=Arabidopsis thaliana GN=SDH2-3 PE=1 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 2.0e-115
Identity = 194/269 (72.12%), Postives = 228/269 (84.76%), Query Frame = 1 

Query: 23  FGVLDGHPAAQQHAQEAMEAH--TKFKSNQ-----KEFRVYRWSPEHPNHKPFLQSFFID 82
           F +L+GH AAQ  +++ +++   TK K  Q     KEF++YRW+P+ PN KPFLQSFF+D
Sbjct: 32  FPILNGHKAAQDLSKDTLKSQDITKEKEGQHKEVKKEFKIYRWNPDKPNSKPFLQSFFVD 91

Query: 83  LSKCGSMVLDALQKIKAEEDSSLSYRRSCREGICGSCAMNIDGANTVACLKPIDTDTSKP 142
           LS CG MVLD LQKIKAE+D+SLSYRRSCREGICGSC+MNIDG NTVACLKPI+ +TSKP
Sbjct: 92  LSSCGPMVLDVLQKIKAEDDASLSYRRSCREGICGSCSMNIDGTNTVACLKPINPNTSKP 151

Query: 143 TIITPLPHMFVIKDLAVDLTNFYQQYKSIEPWLKTKRLPKDGREFRQSPAERRKLDGLYE 202
           TIITPLPHM+VIKDL VDLTNFYQQYKS+EPWLKT++ PKDGRE RQSP +R+KLDGLYE
Sbjct: 152 TIITPLPHMYVIKDLVVDLTNFYQQYKSMEPWLKTRKPPKDGREHRQSPKDRKKLDGLYE 211

Query: 203 CILCACCSASCPPYWWNPEEFLGPAALLHACRWISDSRDEFKKERLQAIAEDETKLYRCR 262
           CILCACC+ SCP YWWNPEEF GPAALL A RWISDSRDE+++ERLQAI E ETK+YRCR
Sbjct: 212 CILCACCTTSCPSYWWNPEEFPGPAALLQAYRWISDSRDEYREERLQAITESETKVYRCR 271

Query: 263 TVQNCTANCPKSLDPSGAIHHMKAMHLLS 285
            ++NCTA CPK L+P+ AI  MK+ HLLS
Sbjct: 272 AIKNCTATCPKGLNPASAILKMKSKHLLS 300

[Close]
BLAST of CmoCh04G008620 vs. Swiss-Prot
Match: SDHB2_ORYSJ (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Oryza sativa subsp. japonica GN=SDH2-2 PE=1 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 5.2e-100
Identity = 175/289 (60.55%), Postives = 214/289 (74.05%), Query Frame = 1 

Query: 19  ANQKFGVLDGHPAAQQHAQEAME---------------------AHTKFKSNQKEFRVYR 78
           A+  F  L GHPAA+ +A++A E                     A +   S  KEFRVYR
Sbjct: 22  ADGHFPSLRGHPAARANARDAAEKQAALAAKEEEIRDHRRGDAAAASPAPSTVKEFRVYR 81

Query: 79  WSPEHPNHKPFLQSFFIDLSKCGSMVLDALQKIKAEEDSSLSYRRSCREGICGSCAMNID 138
           WSP+ P+ +P LQS+ +DL+ CG MVLD LQKIKAE D++L++RRSCREGICGSC+M ID
Sbjct: 82  WSPDAPSRRPHLQSYHVDLATCGPMVLDVLQKIKAEHDATLAFRRSCREGICGSCSMCID 141

Query: 139 GANTVACLKPIDTDTSKPTIITPLPHMFVIKDLAVDLTNFYQQYKSIEPWLKTKRLPK-D 198
           G NTVACL+P+DTDTS  T +TPLPHM+V++DL VDLT+FYQQYKS+EPWLK K   K +
Sbjct: 142 GVNTVACLRPVDTDTSSATTVTPLPHMYVVRDLVVDLTSFYQQYKSVEPWLKRKTKTKTE 201

Query: 199 GREFRQSPAERRKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHACRWISDSRDEF 258
             E  QSP ER++LDGLYECILCACCSA+CP YWWN E FLGPAALLHA RW+SDSRDE+
Sbjct: 202 TTEHAQSPEERKRLDGLYECILCACCSAACPSYWWNAEAFLGPAALLHAYRWVSDSRDEY 261

Query: 259 KKERLQAIAEDETKLYRCRTVQNCTANCPKSLDPSGAIHHMKAMHLLSR 286
             ER+QA+AE   KLYRCR +++CTA CPKSLDP+ AI  MK +H L +
Sbjct: 262 AAERVQALAEGWDKLYRCRMIKSCTATCPKSLDPAAAISAMKTLHQLGK 310

[Close]
BLAST of CmoCh04G008620 vs. Swiss-Prot
Match: SDHB1_ORYSJ (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Oryza sativa subsp. japonica GN=SDH2-1 PE=1 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 3.9e-87
Identity = 153/240 (63.75%), Postives = 184/240 (76.67%), Query Frame = 1 

Query: 44  TKFKSNQKEFRVYRWSPEHPNHKPFLQSFFIDLSKCGSMVLDALQKIKAEEDSSLSYRRS 103
           +K  +N K F +YRW P+ P+ KP L+ + +DLS CG MVLD L KIK E+D SL++RRS
Sbjct: 42  SKAGANTKTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDVLLKIKNEQDPSLTFRRS 101

Query: 104 CREGICGSCAMNIDGANTVACLKPIDTDTSKPTIITPLPHMFVIKDLAVDLTNFYQQYKS 163
           CREGICGSCAMNIDG N +ACL  I + +S  TI +PLPHMFVIKDL VD+TNFY QYKS
Sbjct: 102 CREGICGSCAMNIDGDNGLACLTKISSASSASTI-SPLPHMFVIKDLVVDMTNFYNQYKS 161

Query: 164 IEPWLKTKRLP-KDGREFRQSPAERRKLDGLYECILCACCSASCPPYWWNPEEFLGPAAL 223
           +EPWLK K  P + G+E  Q+ A+R KLDG+YECILCACCS SCP YWWNPEE+LGPAAL
Sbjct: 162 VEPWLKRKDAPPQPGKEIPQTKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAAL 221

Query: 224 LHACRWISDSRDEFKKERLQAIAEDETKLYRCRTVQNCTANCPKSLDPSGAIHHMKAMHL 283
           LHA RWI DSRD+F KERL +I  DE KLYRC T++NCT  CPK L+P+  I  +K + L
Sbjct: 222 LHANRWIQDSRDQFTKERLDSI-NDEFKLYRCHTIKNCTHACPKGLNPAKHIDTIKKLQL 279

[Close]
BLAST of CmoCh04G008620 vs. Swiss-Prot
Match: SDHB2_ARATH (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Arabidopsis thaliana GN=SDH2-2 PE=1 SV=2)

HSP 1 Score: 319.7 bits (818), Expect = 3.3e-86
Identity = 155/231 (67.10%), Postives = 178/231 (77.06%), Query Frame = 1 

Query: 51  KEFRVYRWSPEHPNHKPFLQSFFIDLSKCGSMVLDALQKIKAEEDSSLSYRRSCREGICG 110
           K F++YRW+P++P  KP LQ + IDL  CG MVLDAL KIK E D SL++RRSCREGICG
Sbjct: 49  KTFQIYRWNPDNPG-KPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICG 108

Query: 111 SCAMNIDGANTVACLKPIDTDTSKPTIITPLPHMFVIKDLAVDLTNFYQQYKSIEPWLKT 170
           SCAMNIDG N +ACL  I++  SK T ITPLPHMFVIKDL VD+TNFY QYKSIEPWLK 
Sbjct: 109 SCAMNIDGCNGLACLTKIESG-SKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 168

Query: 171 KRLPK-DGREFRQSPAERRKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHACRWI 230
           K      G+E  QS  +R KLDG+YECILCACCS SCP YWWNPE +LGPAALLHA RWI
Sbjct: 169 KNPASVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWI 228

Query: 231 SDSRDEFKKERLQAIAEDETKLYRCRTVQNCTANCPKSLDPSGAIHHMKAM 281
           SDSRDE+ KERL+AI +DE KLYRC T+ NC   CPK L+P   I H+K +
Sbjct: 229 SDSRDEYTKERLEAI-DDEFKLYRCHTILNCARACPKGLNPGKQITHIKQL 276

[Close]
BLAST of CmoCh04G008620 vs. Swiss-Prot
Match: SDHB1_ARATH (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Arabidopsis thaliana GN=SDH2-1 PE=1 SV=2)

HSP 1 Score: 318.9 bits (816), Expect = 5.6e-86
Identity = 155/234 (66.24%), Postives = 179/234 (76.50%), Query Frame = 1 

Query: 48  SNQKEFRVYRWSPEHPNHKPFLQSFFIDLSKCGSMVLDALQKIKAEEDSSLSYRRSCREG 107
           SN K F++YRW+P++P  KP LQ++ IDL  CG MVLDAL KIK E D SL++RRSCREG
Sbjct: 47  SNLKTFQIYRWNPDNPG-KPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREG 106

Query: 108 ICGSCAMNIDGANTVACLKPIDTDTSKPTIITPLPHMFVIKDLAVDLTNFYQQYKSIEPW 167
           ICGSCAMNIDG N +ACL  I  + S+ TI TPLPHMFVIKDL VD+TNFY QYKSIEPW
Sbjct: 107 ICGSCAMNIDGCNGLACLTKIQDEASETTI-TPLPHMFVIKDLVVDMTNFYNQYKSIEPW 166

Query: 168 LKTKRLPK-DGREFRQSPAERRKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHAC 227
           LK K       +E  QS  +R KLDG+YECILCACCS SCP YWWNPE +LGPAALLHA 
Sbjct: 167 LKRKTPASVPAKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHAN 226

Query: 228 RWISDSRDEFKKERLQAIAEDETKLYRCRTVQNCTANCPKSLDPSGAIHHMKAM 281
           RWISDSRDE+ KERL+AI +DE KLYRC T+ NC   CPK L+P   I H+K +
Sbjct: 227 RWISDSRDEYTKERLEAI-DDEFKLYRCHTILNCARACPKGLNPGKQITHIKQL 277

[Close]
BLAST of CmoCh04G008620 vs. TrEMBL
Match: A0A0A0KUA7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G028980 PE=4 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 6.1e-140
Identity = 238/293 (81.23%), Postives = 260/293 (88.74%), Query Frame = 1 

Query: 1   MLRTWFRNAYSKAVPKPAANQKFGVLDGHPAAQQHAQEAMEAHTKFKSN------QKEFR 60
           ML+ WFR+ Y+K        Q+FGVL+  P A+QHA+EAMEAH + KSN      +KEF+
Sbjct: 1   MLKRWFRHGYNKEW-----KQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEFK 60

Query: 61  VYRWSPEHPNHKPFLQSFFIDLSKCGSMVLDALQKIKAEEDSSLSYRRSCREGICGSCAM 120
           +YRW+P++PNHKPFL SFF+DLSKCG MVLDALQKIKAE+DSSLSYRRSCREGICGSC M
Sbjct: 61  IYRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGM 120

Query: 121 NIDGANTVACLKPIDTDTSKPTIITPLPHMFVIKDLAVDLTNFYQQYKSIEPWLKTKRLP 180
           NIDGANTVACLKPID DTSKPTIITPLPHMFVIKDL VDLTNFYQQYKSIEPWLKT+R  
Sbjct: 121 NIDGANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSA 180

Query: 181 KDGREFRQSPAERRKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHACRWISDSRD 240
           + GREFRQSPAER+KLDGLYECILCACCS SCPPYWWNPEEFLGPAALLHA RWISDSRD
Sbjct: 181 EGGREFRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRD 240

Query: 241 EFKKERLQAIAEDETKLYRCRTVQNCTANCPKSLDPSGAIHHMKAMHLLSRDN 288
           EFKKERLQAIAED+TKLYRCRTV+NCTANCPKSLDPS AIHHMKAMHL+SR N
Sbjct: 241 EFKKERLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISRSN 288

[Close]
BLAST of CmoCh04G008620 vs. TrEMBL
Match: B9T7U2_RICCO (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Ricinus communis GN=RCOM_0325190 PE=3 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 9.5e-125
Identity = 210/291 (72.16%), Postives = 245/291 (84.19%), Query Frame = 1 

Query: 3   RTWFRNAYSKAV----PKPAANQKFGVLDGHPAAQQHAQEAMEAHTKFKSNQ----KEFR 62
           R+W R+ Y+K       +   +Q F +L GHP  QQHAQE++E +   + N     KEFR
Sbjct: 9   RSWLRHGYNKIARMLGKQDPKDQNFPILKGHPVGQQHAQESVETYGTVQDNIKKLIKEFR 68

Query: 63  VYRWSPEHPNHKPFLQSFFIDLSKCGSMVLDALQKIKAEEDSSLSYRRSCREGICGSCAM 122
           VYRWSP++PN+KPFLQS+FIDLS CG MVLDALQKIKAE+DSSLSYRRSCREGICGSC+M
Sbjct: 69  VYRWSPDNPNNKPFLQSYFIDLSSCGPMVLDALQKIKAEDDSSLSYRRSCREGICGSCSM 128

Query: 123 NIDGANTVACLKPIDTDTSKPTIITPLPHMFVIKDLAVDLTNFYQQYKSIEPWLKTKRLP 182
           NIDG NTVACLKPID DTS+PTIITPLPHM+VIKDL VDLTNFY QY+SIEPWLKT++ P
Sbjct: 129 NIDGTNTVACLKPIDADTSRPTIITPLPHMYVIKDLVVDLTNFYNQYRSIEPWLKTRKKP 188

Query: 183 KDGREFRQSPAERRKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHACRWISDSRD 242
           +DGRE+RQSPA+R+KLDGLYECILCACCSASCP YWWNPEEFLGPA L+HA RWISDSRD
Sbjct: 189 EDGREYRQSPADRKKLDGLYECILCACCSASCPSYWWNPEEFLGPAPLIHAYRWISDSRD 248

Query: 243 EFKKERLQAIAEDETKLYRCRTVQNCTANCPKSLDPSGAIHHMKAMHLLSR 286
           +F  ERLQA+ ED+ +LYRCRT++NCTA CPKSL+P+ AIH MK  HLLS+
Sbjct: 249 DFTDERLQALTEDQKRLYRCRTIKNCTATCPKSLNPADAIHKMKTKHLLSQ 299

[Close]
BLAST of CmoCh04G008620 vs. TrEMBL
Match: A0A067LHL7_JATCU (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Jatropha curcas GN=JCGZ_24062 PE=3 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 4.4e-122
Identity = 209/284 (73.59%), Postives = 241/284 (84.86%), Query Frame = 1 

Query: 7   RNAYSKAVPKPAANQK-FGVLDGHPAAQQHAQEAMEAHTKFKSNQK----EFRVYRWSPE 66
           RN  S    K  A ++ F VL+GHPA Q+HAQE++E +   K+N K    EF++YRW+P+
Sbjct: 12  RNRLSHIFGKETAKKENFPVLEGHPAGQEHAQESIETYDTIKTNIKRLIKEFKIYRWNPD 71

Query: 67  HPNHKPFLQSFFIDLSKCGSMVLDALQKIKAEEDSSLSYRRSCREGICGSCAMNIDGANT 126
            PN KPFLQS++IDLS CG MVLD LQKIKAE+DSSLSYRRSCREGICGSCAMNIDG NT
Sbjct: 72  IPNRKPFLQSYYIDLSTCGPMVLDVLQKIKAEDDSSLSYRRSCREGICGSCAMNIDGTNT 131

Query: 127 VACLKPIDTDTSKPTIITPLPHMFVIKDLAVDLTNFYQQYKSIEPWLKTKRLPKDGREFR 186
           VACLKPID DT+KPTIITPLPHMFVIKDL VDLTNFY QY+SIEPWLKT++ P+DGRE+R
Sbjct: 132 VACLKPIDADTTKPTIITPLPHMFVIKDLVVDLTNFYNQYRSIEPWLKTRKKPEDGREYR 191

Query: 187 QSPAERRKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHACRWISDSRDEFKKERL 246
           QSPA+R+KLDGLYECILCACCSASCP YWW+PEEFLGPA LLHA RWISDSRDEF +ERL
Sbjct: 192 QSPADRKKLDGLYECILCACCSASCPSYWWSPEEFLGPAPLLHAYRWISDSRDEFTEERL 251

Query: 247 QAIAEDETKLYRCRTVQNCTANCPKSLDPSGAIHHMKAMHLLSR 286
           QA+ ED  KLY+CRT++NCTA CPKSL+P+ AIH MK  HLLS+
Sbjct: 252 QALTEDTKKLYKCRTIKNCTACCPKSLNPADAIHKMKTKHLLSQ 295

[Close]
BLAST of CmoCh04G008620 vs. TrEMBL
Match: M5W2C3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016428mg PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 5.7e-122
Identity = 206/293 (70.31%), Postives = 245/293 (83.62%), Query Frame = 1 

Query: 1   MLRTWFRNAYSKA--VPKPAANQK---FGVLDGHPAAQQHAQEAMEAHTKFKSNQ---KE 60
           M ++W R+ +++   +   AA+ K   F VL+GHP AQQHA+ A+E H   K  +   KE
Sbjct: 1   MSKSWIRHGFNRVARIVGRAADPKKENFPVLEGHPVAQQHAEVALETHDTVKKKEQLLKE 60

Query: 61  FRVYRWSPEHPNHKPFLQSFFIDLSKCGSMVLDALQKIKAEEDSSLSYRRSCREGICGSC 120
           F++YRWSP+HPN+KP+L S+F+DLS CG MVLDALQKIKAE+DSSLSY RSCREGICGSC
Sbjct: 61  FKIYRWSPDHPNNKPYLHSYFVDLSNCGPMVLDALQKIKAEDDSSLSYWRSCREGICGSC 120

Query: 121 AMNIDGANTVACLKPIDTDTSKPTIITPLPHMFVIKDLAVDLTNFYQQYKSIEPWLKTKR 180
           +MNIDG NTVACL+PID DTSKPT ITPLPHMFVIKDL VDLTNFYQQYK IEPWLKT +
Sbjct: 121 SMNIDGTNTVACLRPIDADTSKPTTITPLPHMFVIKDLVVDLTNFYQQYKLIEPWLKTTK 180

Query: 181 LPKDGREFRQSPAERRKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHACRWISDS 240
            PKDGRE+RQSP++R+KLDGLYECILCACC+ SCP YWWNPEEFLGPAALLHA RWI+DS
Sbjct: 181 PPKDGREYRQSPSDRKKLDGLYECILCACCTTSCPSYWWNPEEFLGPAALLHAYRWIADS 240

Query: 241 RDEFKKERLQAIAEDETKLYRCRTVQNCTANCPKSLDPSGAIHHMKAMHLLSR 286
           RDEF + RLQA+ +D T+LYRCRT++NCTA CPKSL+P+ AI+ MK  HLLS+
Sbjct: 241 RDEFTEPRLQALTDDHTRLYRCRTIKNCTATCPKSLNPADAINKMKTRHLLSQ 293

[Close]
BLAST of CmoCh04G008620 vs. TrEMBL
Match: A0A022Q5S2_ERYGU (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Erythranthe guttata GN=MIMGU_mgv1a020566mg PE=3 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 6.3e-121
Identity = 205/295 (69.49%), Postives = 239/295 (81.02%), Query Frame = 1 

Query: 4   TWFRNAYSKAV---------PKPAANQKFGVLDGHPAAQQHAQEAMEAH----TKFKSNQ 63
           +W ++ Y K           P  +    F  L+GH AAQ+HA++ +E H     K  + +
Sbjct: 2   SWIKDGYKKVSDAVVRKIENPAKSGGGHFPTLEGHAAAQRHAEQVLETHGALREKMNNLK 61

Query: 64  KEFRVYRWSPEHPNHKPFLQSFFIDLSKCGSMVLDALQKIKAEEDSSLSYRRSCREGICG 123
           KEF++YRWSP+H + KPFLQS+F+DLSKCG MVLD LQKIK EEDSSLSYRRSCREGICG
Sbjct: 62  KEFKIYRWSPDHLHRKPFLQSYFVDLSKCGPMVLDVLQKIKGEEDSSLSYRRSCREGICG 121

Query: 124 SCAMNIDGANTVACLKPIDTDTSKPTIITPLPHMFVIKDLAVDLTNFYQQYKSIEPWLKT 183
           SCAMNIDG NTVACLKPID DTSKPT+ITPLPHM+VIKDL VDLTNFYQQYKSIEPWLKT
Sbjct: 122 SCAMNIDGTNTVACLKPIDADTSKPTVITPLPHMYVIKDLVVDLTNFYQQYKSIEPWLKT 181

Query: 184 KRLPKDGREFRQSPAERRKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHACRWIS 243
           K+ P DGRE+RQS AER++LDGLYECILCACCS SCP YWWNPE+F GPAALLHA RWI+
Sbjct: 182 KKPPPDGREYRQSIAERKRLDGLYECILCACCSTSCPSYWWNPEQFHGPAALLHAYRWIT 241

Query: 244 DSRDEFKKERLQAIAEDETKLYRCRTVQNCTANCPKSLDPSGAIHHMKAMHLLSR 286
           DSRD+F  ERLQA+ EDET+LYRCRT++NCTA CPKSL+P+ AI+ MK  HLLS+
Sbjct: 242 DSRDDFTDERLQALTEDETRLYRCRTIKNCTATCPKSLNPANAINKMKTKHLLSQ 296

[Close]
BLAST of CmoCh04G008620 vs. TAIR10
Match: AT5G65165.1 (AT5G65165.1 succinate dehydrogenase 2-3)

HSP 1 Score: 416.8 bits (1070), Expect = 1.1e-116
Identity = 194/269 (72.12%), Postives = 228/269 (84.76%), Query Frame = 1 

Query: 23  FGVLDGHPAAQQHAQEAMEAH--TKFKSNQ-----KEFRVYRWSPEHPNHKPFLQSFFID 82
           F +L+GH AAQ  +++ +++   TK K  Q     KEF++YRW+P+ PN KPFLQSFF+D
Sbjct: 32  FPILNGHKAAQDLSKDTLKSQDITKEKEGQHKEVKKEFKIYRWNPDKPNSKPFLQSFFVD 91

Query: 83  LSKCGSMVLDALQKIKAEEDSSLSYRRSCREGICGSCAMNIDGANTVACLKPIDTDTSKP 142
           LS CG MVLD LQKIKAE+D+SLSYRRSCREGICGSC+MNIDG NTVACLKPI+ +TSKP
Sbjct: 92  LSSCGPMVLDVLQKIKAEDDASLSYRRSCREGICGSCSMNIDGTNTVACLKPINPNTSKP 151

Query: 143 TIITPLPHMFVIKDLAVDLTNFYQQYKSIEPWLKTKRLPKDGREFRQSPAERRKLDGLYE 202
           TIITPLPHM+VIKDL VDLTNFYQQYKS+EPWLKT++ PKDGRE RQSP +R+KLDGLYE
Sbjct: 152 TIITPLPHMYVIKDLVVDLTNFYQQYKSMEPWLKTRKPPKDGREHRQSPKDRKKLDGLYE 211

Query: 203 CILCACCSASCPPYWWNPEEFLGPAALLHACRWISDSRDEFKKERLQAIAEDETKLYRCR 262
           CILCACC+ SCP YWWNPEEF GPAALL A RWISDSRDE+++ERLQAI E ETK+YRCR
Sbjct: 212 CILCACCTTSCPSYWWNPEEFPGPAALLQAYRWISDSRDEYREERLQAITESETKVYRCR 271

Query: 263 TVQNCTANCPKSLDPSGAIHHMKAMHLLS 285
            ++NCTA CPK L+P+ AI  MK+ HLLS
Sbjct: 272 AIKNCTATCPKGLNPASAILKMKSKHLLS 300

[Close]
BLAST of CmoCh04G008620 vs. TAIR10
Match: AT5G40650.1 (AT5G40650.1 succinate dehydrogenase 2-2)

HSP 1 Score: 319.7 bits (818), Expect = 1.8e-87
Identity = 155/231 (67.10%), Postives = 178/231 (77.06%), Query Frame = 1 

Query: 51  KEFRVYRWSPEHPNHKPFLQSFFIDLSKCGSMVLDALQKIKAEEDSSLSYRRSCREGICG 110
           K F++YRW+P++P  KP LQ + IDL  CG MVLDAL KIK E D SL++RRSCREGICG
Sbjct: 49  KTFQIYRWNPDNPG-KPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICG 108

Query: 111 SCAMNIDGANTVACLKPIDTDTSKPTIITPLPHMFVIKDLAVDLTNFYQQYKSIEPWLKT 170
           SCAMNIDG N +ACL  I++  SK T ITPLPHMFVIKDL VD+TNFY QYKSIEPWLK 
Sbjct: 109 SCAMNIDGCNGLACLTKIESG-SKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 168

Query: 171 KRLPK-DGREFRQSPAERRKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHACRWI 230
           K      G+E  QS  +R KLDG+YECILCACCS SCP YWWNPE +LGPAALLHA RWI
Sbjct: 169 KNPASVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWI 228

Query: 231 SDSRDEFKKERLQAIAEDETKLYRCRTVQNCTANCPKSLDPSGAIHHMKAM 281
           SDSRDE+ KERL+AI +DE KLYRC T+ NC   CPK L+P   I H+K +
Sbjct: 229 SDSRDEYTKERLEAI-DDEFKLYRCHTILNCARACPKGLNPGKQITHIKQL 276

[Close]
BLAST of CmoCh04G008620 vs. TAIR10
Match: AT3G27380.1 (AT3G27380.1 succinate dehydrogenase 2-1)

HSP 1 Score: 318.9 bits (816), Expect = 3.1e-87
Identity = 155/234 (66.24%), Postives = 179/234 (76.50%), Query Frame = 1 

Query: 48  SNQKEFRVYRWSPEHPNHKPFLQSFFIDLSKCGSMVLDALQKIKAEEDSSLSYRRSCREG 107
           SN K F++YRW+P++P  KP LQ++ IDL  CG MVLDAL KIK E D SL++RRSCREG
Sbjct: 47  SNLKTFQIYRWNPDNPG-KPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREG 106

Query: 108 ICGSCAMNIDGANTVACLKPIDTDTSKPTIITPLPHMFVIKDLAVDLTNFYQQYKSIEPW 167
           ICGSCAMNIDG N +ACL  I  + S+ TI TPLPHMFVIKDL VD+TNFY QYKSIEPW
Sbjct: 107 ICGSCAMNIDGCNGLACLTKIQDEASETTI-TPLPHMFVIKDLVVDMTNFYNQYKSIEPW 166

Query: 168 LKTKRLPK-DGREFRQSPAERRKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHAC 227
           LK K       +E  QS  +R KLDG+YECILCACCS SCP YWWNPE +LGPAALLHA 
Sbjct: 167 LKRKTPASVPAKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHAN 226

Query: 228 RWISDSRDEFKKERLQAIAEDETKLYRCRTVQNCTANCPKSLDPSGAIHHMKAM 281
           RWISDSRDE+ KERL+AI +DE KLYRC T+ NC   CPK L+P   I H+K +
Sbjct: 227 RWISDSRDEYTKERLEAI-DDEFKLYRCHTILNCARACPKGLNPGKQITHIKQL 277

[Close]
BLAST of CmoCh04G008620 vs. NCBI nr
Match: gi|659108955|ref|XP_008454472.1| (PREDICTED: succinate dehydrogenase [ubiquinone])

HSP 1 Score: 507.3 bits (1305), Expect = 1.8e-140
Identity = 238/292 (81.51%), Postives = 264/292 (90.41%), Query Frame = 1 

Query: 1   MLRTWFRNAYSKAVPKPAANQKFGVLDGHPAAQQHAQEAMEAHTKFKSN-----QKEFRV 60
           ML++WFR+AY+K      + Q+FGVL+ HP A+QHA+EAMEAH + KSN     QKEF++
Sbjct: 1   MLKSWFRHAYNKV-----SKQRFGVLEEHPMAKQHAEEAMEAHGEIKSNLRFNNQKEFKI 60

Query: 61  YRWSPEHPNHKPFLQSFFIDLSKCGSMVLDALQKIKAEEDSSLSYRRSCREGICGSCAMN 120
           YRW+P++PNHKPFL SFF+DLSKCG MVLDALQ IKAE+DSSLSYRRSCREGICGSCAMN
Sbjct: 61  YRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQMIKAEKDSSLSYRRSCREGICGSCAMN 120

Query: 121 IDGANTVACLKPIDTDTSKPTIITPLPHMFVIKDLAVDLTNFYQQYKSIEPWLKTKRLPK 180
           IDGANTVACLKPID DTSKPTIITPLPHM+VIKDL VDLTNFYQQYKSIEPWLKT+R  +
Sbjct: 121 IDGANTVACLKPIDADTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSIEPWLKTRRSAE 180

Query: 181 DGREFRQSPAERRKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHACRWISDSRDE 240
            GREFRQ+PAER+KLDGLYECILCACCSASCPPYWWNPEEF+GPAALLHA RWISDSRDE
Sbjct: 181 GGREFRQTPAERKKLDGLYECILCACCSASCPPYWWNPEEFIGPAALLHAYRWISDSRDE 240

Query: 241 FKKERLQAIAEDETKLYRCRTVQNCTANCPKSLDPSGAIHHMKAMHLLSRDN 288
           FKKERLQAIAED+TKLYRCRTVQNCTANCPKSLDPS AIH+MKAMHL+ R N
Sbjct: 241 FKKERLQAIAEDKTKLYRCRTVQNCTANCPKSLDPSSAIHNMKAMHLIFRSN 287

[Close]
BLAST of CmoCh04G008620 vs. NCBI nr
Match: gi|449458373|ref|XP_004146922.1| (PREDICTED: succinate dehydrogenase [ubiquinone])

HSP 1 Score: 505.0 bits (1299), Expect = 8.8e-140
Identity = 238/293 (81.23%), Postives = 260/293 (88.74%), Query Frame = 1 

Query: 1   MLRTWFRNAYSKAVPKPAANQKFGVLDGHPAAQQHAQEAMEAHTKFKSN------QKEFR 60
           ML+ WFR+ Y+K        Q+FGVL+  P A+QHA+EAMEAH + KSN      +KEF+
Sbjct: 1   MLKRWFRHGYNKEW-----KQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEFK 60

Query: 61  VYRWSPEHPNHKPFLQSFFIDLSKCGSMVLDALQKIKAEEDSSLSYRRSCREGICGSCAM 120
           +YRW+P++PNHKPFL SFF+DLSKCG MVLDALQKIKAE+DSSLSYRRSCREGICGSC M
Sbjct: 61  IYRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGM 120

Query: 121 NIDGANTVACLKPIDTDTSKPTIITPLPHMFVIKDLAVDLTNFYQQYKSIEPWLKTKRLP 180
           NIDGANTVACLKPID DTSKPTIITPLPHMFVIKDL VDLTNFYQQYKSIEPWLKT+R  
Sbjct: 121 NIDGANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSA 180

Query: 181 KDGREFRQSPAERRKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHACRWISDSRD 240
           + GREFRQSPAER+KLDGLYECILCACCS SCPPYWWNPEEFLGPAALLHA RWISDSRD
Sbjct: 181 EGGREFRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRD 240

Query: 241 EFKKERLQAIAEDETKLYRCRTVQNCTANCPKSLDPSGAIHHMKAMHLLSRDN 288
           EFKKERLQAIAED+TKLYRCRTV+NCTANCPKSLDPS AIHHMKAMHL+SR N
Sbjct: 241 EFKKERLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISRSN 288

[Close]
BLAST of CmoCh04G008620 vs. NCBI nr
Match: gi|659108953|ref|XP_008454471.1| (PREDICTED: succinate dehydrogenase [ubiquinone])

HSP 1 Score: 505.0 bits (1299), Expect = 8.8e-140
Identity = 238/292 (81.51%), Postives = 261/292 (89.38%), Query Frame = 1 

Query: 1   MLRTWFRNAYSKAVPKPAANQKFGVLDGHPAAQQHAQEAMEAHTKFKSN-----QKEFRV 60
           ML+ WFR+AY+K   K     +FGVL+ HP A+QHA+EAMEAH + KSN     QKEF++
Sbjct: 1   MLKGWFRHAYNKVSKK-----RFGVLEEHPIAKQHAEEAMEAHGEIKSNLRFNNQKEFKI 60

Query: 61  YRWSPEHPNHKPFLQSFFIDLSKCGSMVLDALQKIKAEEDSSLSYRRSCREGICGSCAMN 120
           YRW+P++PNHKPFL SFF+DLSKCG MVLDALQ IKAE+DSSLSYRRSCREGICGSCAMN
Sbjct: 61  YRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQMIKAEKDSSLSYRRSCREGICGSCAMN 120

Query: 121 IDGANTVACLKPIDTDTSKPTIITPLPHMFVIKDLAVDLTNFYQQYKSIEPWLKTKRLPK 180
           IDGANTVACLKPID DTSKPTIITPLPHM+VIKDL VDLTNFYQQYKSIEPWLKT+R  +
Sbjct: 121 IDGANTVACLKPIDADTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSIEPWLKTRRSAE 180

Query: 181 DGREFRQSPAERRKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHACRWISDSRDE 240
            GREFRQ+PAER+KLDGLYECILCACCS SCPPYWWNPEEFLGPAALLHA RWISDSRDE
Sbjct: 181 GGREFRQTPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDE 240

Query: 241 FKKERLQAIAEDETKLYRCRTVQNCTANCPKSLDPSGAIHHMKAMHLLSRDN 288
           FK+ERLQAIAEDETKLYRCRTV+NCTA CPKSLDPS AIHHMKAMHL+SR N
Sbjct: 241 FKEERLQAIAEDETKLYRCRTVKNCTATCPKSLDPSSAIHHMKAMHLISRSN 287

[Close]
BLAST of CmoCh04G008620 vs. NCBI nr
Match: gi|1009160795|ref|XP_015898543.1| (PREDICTED: succinate dehydrogenase [ubiquinone])

HSP 1 Score: 456.8 bits (1174), Expect = 2.7e-125
Identity = 212/295 (71.86%), Postives = 244/295 (82.71%), Query Frame = 1 

Query: 1   MLRTWFRNAYSKAV-------PKPAANQKFGVLDGHPAAQQHAQEAMEAHTKFKSNQK-- 60
           M ++W R+ Y K         PK      F +L GHPAAQ+HA+EA+E H   ++  K  
Sbjct: 1   MSKSWVRHGYEKVARILKKGDPK---RHNFPILKGHPAAQEHAEEAVETHDTIRNKSKVL 60

Query: 61  -EFRVYRWSPEHPNHKPFLQSFFIDLSKCGSMVLDALQKIKAEEDSSLSYRRSCREGICG 120
            EF++YRW+P HPN+KP+LQS+F+DLS CG MVLDALQKIKAEEDSSLSYRRSCREGICG
Sbjct: 61  KEFKIYRWNPNHPNNKPYLQSYFLDLSNCGPMVLDALQKIKAEEDSSLSYRRSCREGICG 120

Query: 121 SCAMNIDGANTVACLKPIDTDTSKPTIITPLPHMFVIKDLAVDLTNFYQQYKSIEPWLKT 180
           SC+MNIDG NTVACL+PI  DTSKPT+ITPLPHMFVIKDL VDLTNFYQQYK I+PWLKT
Sbjct: 121 SCSMNIDGTNTVACLRPIGKDTSKPTVITPLPHMFVIKDLVVDLTNFYQQYKYIKPWLKT 180

Query: 181 KRLPKDGREFRQSPAERRKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHACRWIS 240
           K+ P+DGRE+RQSP +R+KLDGLYECILCACCS SCP YWWNPEEF GPAALLHA RWIS
Sbjct: 181 KKHPEDGREYRQSPEDRKKLDGLYECILCACCSTSCPSYWWNPEEFPGPAALLHAYRWIS 240

Query: 241 DSRDEFKKERLQAIAEDETKLYRCRTVQNCTANCPKSLDPSGAIHHMKAMHLLSR 286
           DSRDEF +ERLQA+ ED+ +LYRCRT+QNCTA CPKSLDP+GAIH MK  HLLS+
Sbjct: 241 DSRDEFTEERLQAVTEDQRRLYRCRTIQNCTAACPKSLDPAGAIHKMKTKHLLSQ 292

[Close]
BLAST of CmoCh04G008620 vs. NCBI nr
Match: gi|255587559|ref|XP_002534311.1| (PREDICTED: succinate dehydrogenase [ubiquinone])

HSP 1 Score: 454.5 bits (1168), Expect = 1.4e-124
Identity = 210/291 (72.16%), Postives = 245/291 (84.19%), Query Frame = 1 

Query: 3   RTWFRNAYSKAV----PKPAANQKFGVLDGHPAAQQHAQEAMEAHTKFKSNQ----KEFR 62
           R+W R+ Y+K       +   +Q F +L GHP  QQHAQE++E +   + N     KEFR
Sbjct: 9   RSWLRHGYNKIARMLGKQDPKDQNFPILKGHPVGQQHAQESVETYGTVQDNIKKLIKEFR 68

Query: 63  VYRWSPEHPNHKPFLQSFFIDLSKCGSMVLDALQKIKAEEDSSLSYRRSCREGICGSCAM 122
           VYRWSP++PN+KPFLQS+FIDLS CG MVLDALQKIKAE+DSSLSYRRSCREGICGSC+M
Sbjct: 69  VYRWSPDNPNNKPFLQSYFIDLSSCGPMVLDALQKIKAEDDSSLSYRRSCREGICGSCSM 128

Query: 123 NIDGANTVACLKPIDTDTSKPTIITPLPHMFVIKDLAVDLTNFYQQYKSIEPWLKTKRLP 182
           NIDG NTVACLKPID DTS+PTIITPLPHM+VIKDL VDLTNFY QY+SIEPWLKT++ P
Sbjct: 129 NIDGTNTVACLKPIDADTSRPTIITPLPHMYVIKDLVVDLTNFYNQYRSIEPWLKTRKKP 188

Query: 183 KDGREFRQSPAERRKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHACRWISDSRD 242
           +DGRE+RQSPA+R+KLDGLYECILCACCSASCP YWWNPEEFLGPA L+HA RWISDSRD
Sbjct: 189 EDGREYRQSPADRKKLDGLYECILCACCSASCPSYWWNPEEFLGPAPLIHAYRWISDSRD 248

Query: 243 EFKKERLQAIAEDETKLYRCRTVQNCTANCPKSLDPSGAIHHMKAMHLLSR 286
           +F  ERLQA+ ED+ +LYRCRT++NCTA CPKSL+P+ AIH MK  HLLS+
Sbjct: 249 DFTDERLQALTEDQKRLYRCRTIKNCTATCPKSLNPADAIHKMKTKHLLSQ 299

The following BLAST results are available for this feature:
BLAST of CmoCh04G008620 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SDHB3_ARATH2.0e-11572.12Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial OS=Ara... [more]
SDHB2_ORYSJ5.2e-10060.55Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Ory... [more]
SDHB1_ORYSJ3.9e-8763.75Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Ory... [more]
SDHB2_ARATH3.3e-8667.10Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Ara... [more]
SDHB1_ARATH5.6e-8666.24Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Ara... [more]
BLAST of CmoCh04G008620 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUA7_CUCSA6.1e-14081.23Uncharacterized protein OS=Cucumis sativus GN=Csa_4G028980 PE=4 SV=1[more]
B9T7U2_RICCO9.5e-12572.16Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Ricin... [more]
A0A067LHL7_JATCU4.4e-12273.59Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Jatro... [more]
M5W2C3_PRUPE5.7e-12270.31Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016428mg PE=4 SV=1[more]
A0A022Q5S2_ERYGU6.3e-12169.49Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Eryth... [more]
BLAST of CmoCh04G008620 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G65165.11.1e-11672.12 succinate dehydrogenase 2-3[more]
AT5G40650.11.8e-8767.10 succinate dehydrogenase 2-2[more]
AT3G27380.13.1e-8766.24 succinate dehydrogenase 2-1[more]
BLAST of CmoCh04G008620 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659108955|ref|XP_008454472.1|1.8e-14081.51PREDICTED: succinate dehydrogenase [ubiquinone][more]
gi|449458373|ref|XP_004146922.1|8.8e-14081.23PREDICTED: succinate dehydrogenase [ubiquinone][more]
gi|659108953|ref|XP_008454471.1|8.8e-14081.51PREDICTED: succinate dehydrogenase [ubiquinone][more]
gi|1009160795|ref|XP_015898543.1|2.7e-12571.86PREDICTED: succinate dehydrogenase [ubiquinone][more]
gi|255587559|ref|XP_002534311.1|1.4e-12472.16PREDICTED: succinate dehydrogenase [ubiquinone][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR0010412Fe-2S_ferredoxin-type
IPR004489Succ_DH/fum_Rdtase_Fe-S
IPR0060582Fe2S_fd_BS
IPR009051Helical_ferredxn
IPR012675Beta-grasp_dom_sf
IPR0178964Fe4S_Fe-S-bd
IPR0179004Fe4S_Fe_S_CS
IPR025192Succ_DH/fum_Rdtase_N
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron carrier activity
GO:0051536iron-sulfur cluster binding
GO:0016491oxidoreductase activity
GO:00515372 iron, 2 sulfur cluster binding
Vocabulary: Biological Process
TermDefinition
GO:0006099tricarboxylic acid cycle
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006119 oxidative phosphorylation
biological_process GO:0006099 tricarboxylic acid cycle
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0022900 electron transport chain
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0045281 succinate dehydrogenase complex
cellular_component GO:0045273 respiratory chain complex II
cellular_component GO:0005575 cellular_component
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0051538 3 iron, 4 sulfur cluster binding
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008177 succinate dehydrogenase (ubiquinone) activity
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0016491 oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G008620.1CmoCh04G008620.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROFILEPS510852FE2S_FER_2coord: 65..144
score:
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainunknownSSF542922Fe-2S ferredoxin-likecoord: 50..153
score: 2.36
IPR004489Succinate dehydrogenase/fumarate reductase iron-sulphur proteinTIGRFAMsTIGR00384TIGR00384coord: 55..278
score: 3.8
IPR0060582Fe-2S ferredoxin, iron-sulphur binding sitePROSITEPS001972FE2S_FER_1coord: 104..112
scor
IPR009051Alpha-helical ferredoxinunknownSSF46548alpha-helical ferredoxincoord: 155..281
score: 1.17
IPR012675Beta-grasp domainGENE3DG3DSA:3.10.20.30coord: 45..153
score: 3.2
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainPROFILEPS513794FE4S_FER_2coord: 186..216
score: 7
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved sitePROSITEPS001984FE4S_FER_1coord: 196..207
scor
IPR025192Succinate dehydogenase/fumarate reductase N-terminalPFAMPF13085Fer2_3coord: 53..158
score: 1.2
NoneNo IPR availableGENE3DG3DSA:1.10.1060.10coord: 155..282
score: 4.9
NoneNo IPR availablePANTHERPTHR11921SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEINcoord: 13..285
score: 2.2E
NoneNo IPR availablePANTHERPTHR11921:SF23SUCCINATE DEHYDROGENASE [UBIQUINONE] IRON-SULFUR SUBUNIT 3, MITOCHONDRIALcoord: 13..285
score: 2.2E
NoneNo IPR availablePFAMPF13534Fer4_17coord: 195..269
score: 5.

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh04G008620Cucsa.029520Cucumber (Gy14) v1cgycmoB0001
CmoCh04G008620CmaCh04G008020Cucurbita maxima (Rimu)cmacmoB728
CmoCh04G008620Cla014485Watermelon (97103) v1cmowmB671
CmoCh04G008620Csa4G028980Cucumber (Chinese Long) v2cmocuB705
CmoCh04G008620MELO3C017585Melon (DHL92) v3.5.1cmomeB686
CmoCh04G008620ClCG07G009520Watermelon (Charleston Gray)cmowcgB670
CmoCh04G008620CSPI04G04680Wild cucumber (PI 183967)cmocpiB715
CmoCh04G008620Lsi07G001740Bottle gourd (USVL1VR-Ls)cmolsiB692
CmoCh04G008620Cp4.1LG01g09430Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G008620MELO3C017585.2Melon (DHL92) v3.6.1cmomedB779
CmoCh04G008620CsaV3_4G004770Cucumber (Chinese Long) v3cmocucB0833
CmoCh04G008620Cla97C07G136330Watermelon (97103) v2cmowmbB748
CmoCh04G008620Bhi01G001933Wax gourdcmowgoB0843
CmoCh04G008620CsGy4G004620Cucumber (Gy14) v2cgybcmoB521
CmoCh04G008620Carg14202Silver-seed gourdcarcmoB1259
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G008620Cucumber (Chinese Long) v3cmocucB0909
CmoCh04G008620Watermelon (97103) v2cmowmbB682
CmoCh04G008620Cucurbita moschata (Rifu)cmocmoB285
CmoCh04G008620Cucurbita moschata (Rifu)cmocmoB451
CmoCh04G008620Cucumber (Gy14) v1cgycmoB0229
CmoCh04G008620Cucurbita maxima (Rimu)cmacmoB337
CmoCh04G008620Wild cucumber (PI 183967)cmocpiB714
CmoCh04G008620Wild cucumber (PI 183967)cmocpiB775
CmoCh04G008620Cucumber (Chinese Long) v2cmocuB704
CmoCh04G008620Cucumber (Chinese Long) v2cmocuB768
CmoCh04G008620Melon (DHL92) v3.5.1cmomeB702
CmoCh04G008620Watermelon (Charleston Gray)cmowcgB641
CmoCh04G008620Watermelon (97103) v1cmowmB711
CmoCh04G008620Cucurbita pepo (Zucchini)cmocpeB655
CmoCh04G008620Cucurbita pepo (Zucchini)cmocpeB667
CmoCh04G008620Bottle gourd (USVL1VR-Ls)cmolsiB628
CmoCh04G008620Cucumber (Gy14) v2cgybcmoB824
CmoCh04G008620Melon (DHL92) v3.6.1cmomedB801
CmoCh04G008620Silver-seed gourdcarcmoB1371