CSPI04G04680 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G04680
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionSuccinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial
LocationChr4 : 3072820 .. 3075098 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTTCATTTCAAATAATTCAAAAGAAAAGTAAACTAGGAGGGATCCATGTTAAAAAGGTGGTTCCGCCATGGCTACAACAAGGAGTGGAAGCAAAGGTTTGGAGTATTAGAGGCACGTCCTATGGCTAAGCAACATGCAGAAGAAGCCATGGAAGCTCATGGTGAAATAAAGAGCAACCTTGATGAATTTAATAATCGAAAGGAGTTCAAAATATATAGGTGGAATCCTCAATATCCCAACCACAAGCCTTTTCTTCACTCTTTCTTTCTCGATCTCTCTAAATGTGGTCCTATGGTACACTATATATTCTATTTCCCTCTCTCTCTCCTCCTTTCATAACGTTTCTGTTTCTGGTTTCTTTCTTGTTTTGATCTTCTGTTGCTTGTTTACACCAACATGGTTCAATAACTATTTAAGAAAATTTAGATAAAAACTTGTTTGATAACTATATCATGAGTTCCGATGTCAATTATTAACGAAAACAATATAATTATTGTTTTCTAGCATTTCAAATGCTGCTCAAATTTAATCTGCATTATTATTTCTCATTCGAGTCATTAATCCCAAATATAATTGAATCATATTATTAGGTAAATTAAATACTCCCCTTAAGTACCTTAAATTTGTACTTTGTGGTCAGTGGTTATCATGACATGCCATTTTGAATTTACATAATGTACGGAGATTACAAAAGTACCTCGAATTTATATCATGAAGTTGGTGGTTAGTGGTTAACAGGAAATGCAATTTTTGAATGAATGTGTTGGGAGAAAAACTGCAAAAGTAGTTCGAATGTGGTGATTAGTACTGTTGATTGGGATGTTTCTAGCTTTGTACGTTGACCAGTTTGAGTGTTACGATAGTTTTTGCCTTTGATTCAAGAAATTATTCAAGATGACCTGTAATGTCAGAATGTGTTCACAGTTTTGCATACTTGGATACAACTTACAAGTATCTTGAATTTGTGTCCGGCATCTCACGACTAGATTATATTTAAGAGTGGTCTCACTCTTCTCGCATGGTGATGTTGTAGGTTTTAGATGCATTGCAGAAGATAAAAGCAGAAAAAGACTCAAGTTTGAGCTATAGAAGATCTTGTAGGGAAGGAATATGTGGATCATGTGGCATGAACATTGATGGAGCTAACACAGTTGCTTGCCTCAAACCTATTGATGCTGACACTTCCAAACCCACCATTATAACCCCTCTTCCCCATATGTTTGTCATCAAAGATCTTGTTGTTGATCTCACCAACTTCTACCAACAATACAAGTAATCTCTCTTGACCTTAAGCTTTTCGCTATCATTCAAATCTTTGTAACGTTATTCCCTTTTATGGAAAGTATTAATTTTCAATTATTATAATAATAAAATTATAAGAAATGTTTGAGGATTCCACTCTTGAAAAAATGAAGAGATGTTACAGTATCTAATCTTTATAAGATTTACACGAGACTGGGCAGATGCTTCATAGCATCTAAGGATACTGTTACTTCTTTCATTAAAAACAAATTGGTTTTTAGATGAAACTCATGCTTAACTAATATGAATTCGAAGACACTTGACATGCGTCCCAGAAATGATACTATCTTGATGTTTGAATAAAATGCATGTGTGTTTTGTCATTAAGATGATTGATTGTATGCGAGAATCATCACATTTTACTTTTCCTCTAAGCTGACTGTAGTGTGATGCATGTATATAGGTCAATCGAGCCATGGCTGAAGACTAGAAGGTCGGCAGAGGGTGGGCGAGAGTTCAGGCAATCTCCGGCAGAGAGGAAGAAACTAGATGGGTTGTACGAGTGTATTCTTTGTGCTTGTTGTAGTACTTCATGTCCTCCATATTGGTGGAATCCAGAAGAGTTTCTTGGTCCTGCTGCATTGCTCCATGCCTATAGATGGATCTCTGATAGGTAATTCAACTTTCTCGATCCCAATTTACTATAGATCTTAAGTTCAACTACCTTAGTCTATGATTGATGATGTGAGGTTTAAAAAACATGATTAAAATGATAGTCGAGATGAGTTCAAGAAGGAACGATTGCAAGCAATAGCCGAAGACGATACAAAGCTTTATAGATGTAGAACTGTGAAGAATTGCACAGCCAACTGCCCCAAAAGCCTTGATCCTTCCTCTGCAATTCACCACATGAAGGCAATGCATTTAATCTCTAGGTCCAATAAGGTGCCCAACAATTAGCTTTTCTAGCCTTTTCTTTCTCTAAAATCCTATGGGTCATAATATATACATATATAAGCCATCTCTTTTTCTTGG

mRNA sequence

ATGTTAAAAAGGTGGTTCCGCCATGGCTACAACAAGGAGTGGAAGCAAAGGTTTGGAGTATTAGAGGCACGTCCTATGGCTAAGCAACATGCAGAAGAAGCCATGGAAGCTCATGGTGAAATAAAGAGCAACCTTGATGAATTTAATAATCGAAAGGAGTTCAAAATATATAGGTGGAATCCTCAATATCCCAACCACAAGCCTTTTCTTCACTCTTTCTTTCTCGATCTCTCTAAATGTGGTCCTATGGTTTTAGATGCATTGCAGAAGATAAAAGCAGAAAAAGACTCAAGTTTGAGCTATAGAAGATCTTGTAGGGAAGGAATATGTGGATCATGTGGCATGAACATTGATGGAGCTAACACAGTTGCTTGCCTCAAACCTATTGATGCTGACACTTCCAAACCCACCATTATAACCCCTCTTCCCCATATGTTTGTCATCAAAGATCTTGTTGTTGATCTCACCAACTTCTACCAACAATACAAGTCAATCGAGCCATGGCTGAAGACTAGAAGGTCGGCAGAGGGTGGGCGAGAGTTCAGGCAATCTCCGGCAGAGAGGAAGAAACTAGATGGGTTGTACGAGTGTATTCTTTGTGCTTGTTGTAGTACTTCATGTCCTCCATATTGGTGGAATCCAGAAGAGTTTCTTGGTCCTGCTGCATTGCTCCATGCCTATAGATGGATCTCTGATAGTCGAGATGAGTTCAAGAAGGAACGATTGCAAGCAATAGCCGAAGACGATACAAAGCTTTATAGATGTAGAACTGTGAAGAATTGCACAGCCAACTGCCCCAAAAGCCTTGATCCTTCCTCTGCAATTCACCACATGAAGGCAATGCATTTAATCTCTAGGTCCAATAAGGTGCCCAACAATTAG

Coding sequence (CDS)

ATGTTAAAAAGGTGGTTCCGCCATGGCTACAACAAGGAGTGGAAGCAAAGGTTTGGAGTATTAGAGGCACGTCCTATGGCTAAGCAACATGCAGAAGAAGCCATGGAAGCTCATGGTGAAATAAAGAGCAACCTTGATGAATTTAATAATCGAAAGGAGTTCAAAATATATAGGTGGAATCCTCAATATCCCAACCACAAGCCTTTTCTTCACTCTTTCTTTCTCGATCTCTCTAAATGTGGTCCTATGGTTTTAGATGCATTGCAGAAGATAAAAGCAGAAAAAGACTCAAGTTTGAGCTATAGAAGATCTTGTAGGGAAGGAATATGTGGATCATGTGGCATGAACATTGATGGAGCTAACACAGTTGCTTGCCTCAAACCTATTGATGCTGACACTTCCAAACCCACCATTATAACCCCTCTTCCCCATATGTTTGTCATCAAAGATCTTGTTGTTGATCTCACCAACTTCTACCAACAATACAAGTCAATCGAGCCATGGCTGAAGACTAGAAGGTCGGCAGAGGGTGGGCGAGAGTTCAGGCAATCTCCGGCAGAGAGGAAGAAACTAGATGGGTTGTACGAGTGTATTCTTTGTGCTTGTTGTAGTACTTCATGTCCTCCATATTGGTGGAATCCAGAAGAGTTTCTTGGTCCTGCTGCATTGCTCCATGCCTATAGATGGATCTCTGATAGTCGAGATGAGTTCAAGAAGGAACGATTGCAAGCAATAGCCGAAGACGATACAAAGCTTTATAGATGTAGAACTGTGAAGAATTGCACAGCCAACTGCCCCAAAAGCCTTGATCCTTCCTCTGCAATTCACCACATGAAGGCAATGCATTTAATCTCTAGGTCCAATAAGGTGCCCAACAATTAG
Homology
[Close]
BLAST of CSPI04G04680 vs. Swiss-Prot
Match: SDHB3_ARATH (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial OS=Arabidopsis thaliana GN=SDH2-3 PE=1 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 3.8e-114
Identity = 192/269 (71.38%), Postives = 222/269 (82.53%), Query Frame = 1 

Query: 18  FGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNN-RKEFKIYRWNPQYPNHKPFLHSFFLD 77
           F +L     A+  +++ +++    K    +    +KEFKIYRWNP  PN KPFL SFF+D
Sbjct: 32  FPILNGHKAAQDLSKDTLKSQDITKEKEGQHKEVKKEFKIYRWNPDKPNSKPFLQSFFVD 91

Query: 78  LSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGANTVACLKPIDADTSKP 137
           LS CGPMVLD LQKIKAE D+SLSYRRSCREGICGSC MNIDG NTVACLKPI+ +TSKP
Sbjct: 92  LSSCGPMVLDVLQKIKAEDDASLSYRRSCREGICGSCSMNIDGTNTVACLKPINPNTSKP 151

Query: 138 TIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGREFRQSPAERKKLDGLYE 197
           TIITPLPHM+VIKDLVVDLTNFYQQYKS+EPWLKTR+  + GRE RQSP +RKKLDGLYE
Sbjct: 152 TIITPLPHMYVIKDLVVDLTNFYQQYKSMEPWLKTRKPPKDGREHRQSPKDRKKLDGLYE 211

Query: 198 CILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKERLQAIAEDDTKLYRCR 257
           CILCACC+TSCP YWWNPEEF GPAALL AYRWISDSRDE+++ERLQAI E +TK+YRCR
Sbjct: 212 CILCACCTTSCPSYWWNPEEFPGPAALLQAYRWISDSRDEYREERLQAITESETKVYRCR 271

Query: 258 TVKNCTANCPKSLDPSSAIHHMKAMHLIS 286
            +KNCTA CPK L+P+SAI  MK+ HL+S
Sbjct: 272 AIKNCTATCPKGLNPASAILKMKSKHLLS 300

[Close]
BLAST of CSPI04G04680 vs. Swiss-Prot
Match: SDHB2_ORYSJ (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Oryza sativa subsp. japonica GN=SDH2-2 PE=1 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 3.8e-98
Identity = 166/285 (58.25%), Postives = 209/285 (73.33%), Query Frame = 1 

Query: 18  FGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNR---------------KEFKIYRWNPQ 77
           F  L   P A+ +A +A E    + +  +E  +                KEF++YRW+P 
Sbjct: 26  FPSLRGHPAARANARDAAEKQAALAAKEEEIRDHRRGDAAAASPAPSTVKEFRVYRWSPD 85

Query: 78  YPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGANT 137
            P+ +P L S+ +DL+ CGPMVLD LQKIKAE D++L++RRSCREGICGSC M IDG NT
Sbjct: 86  APSRRPHLQSYHVDLATCGPMVLDVLQKIKAEHDATLAFRRSCREGICGSCSMCIDGVNT 145

Query: 138 VACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTR-RSAEGGREF 197
           VACL+P+D DTS  T +TPLPHM+V++DLVVDLT+FYQQYKS+EPWLK + ++     E 
Sbjct: 146 VACLRPVDTDTSSATTVTPLPHMYVVRDLVVDLTSFYQQYKSVEPWLKRKTKTKTETTEH 205

Query: 198 RQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKER 257
            QSP ERK+LDGLYECILCACCS +CP YWWN E FLGPAALLHAYRW+SDSRDE+  ER
Sbjct: 206 AQSPEERKRLDGLYECILCACCSAACPSYWWNAEAFLGPAALLHAYRWVSDSRDEYAAER 265

Query: 258 LQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISR 287
           +QA+AE   KLYRCR +K+CTA CPKSLDP++AI  MK +H + +
Sbjct: 266 VQALAEGWDKLYRCRMIKSCTATCPKSLDPAAAISAMKTLHQLGK 310

[Close]
BLAST of CSPI04G04680 vs. Swiss-Prot
Match: SDHB2_ARATH (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Arabidopsis thaliana GN=SDH2-2 PE=1 SV=2)

HSP 1 Score: 323.9 bits (829), Expect = 1.8e-87
Identity = 156/231 (67.53%), Postives = 178/231 (77.06%), Query Frame = 1 

Query: 52  KEFKIYRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICG 111
           K F+IYRWNP  P  KP L  + +DL  CGPMVLDAL KIK E D SL++RRSCREGICG
Sbjct: 49  KTFQIYRWNPDNPG-KPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICG 108

Query: 112 SCGMNIDGANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKT 171
           SC MNIDG N +ACL  I++  SK T ITPLPHMFVIKDLVVD+TNFY QYKSIEPWLK 
Sbjct: 109 SCAMNIDGCNGLACLTKIESG-SKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 168

Query: 172 RRSAE-GGREFRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWI 231
           +  A   G+E  QS  +R KLDG+YECILCACCSTSCP YWWNPE +LGPAALLHA RWI
Sbjct: 169 KNPASVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWI 228

Query: 232 SDSRDEFKKERLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAM 282
           SDSRDE+ KERL+AI +D+ KLYRC T+ NC   CPK L+P   I H+K +
Sbjct: 229 SDSRDEYTKERLEAI-DDEFKLYRCHTILNCARACPKGLNPGKQITHIKQL 276

[Close]
BLAST of CSPI04G04680 vs. Swiss-Prot
Match: SDHB1_ORYSJ (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Oryza sativa subsp. japonica GN=SDH2-1 PE=1 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 3.9e-87
Identity = 153/235 (65.11%), Postives = 182/235 (77.45%), Query Frame = 1 

Query: 50  NRKEFKIYRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGI 109
           N K F IYRW+P  P+ KP L  + +DLS CGPMVLD L KIK E+D SL++RRSCREGI
Sbjct: 47  NTKTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDVLLKIKNEQDPSLTFRRSCREGI 106

Query: 110 CGSCGMNIDGANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWL 169
           CGSC MNIDG N +ACL  I + +S  TI +PLPHMFVIKDLVVD+TNFY QYKS+EPWL
Sbjct: 107 CGSCAMNIDGDNGLACLTKISSASSASTI-SPLPHMFVIKDLVVDMTNFYNQYKSVEPWL 166

Query: 170 KTRRSA-EGGREFRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYR 229
           K + +  + G+E  Q+ A+R KLDG+YECILCACCSTSCP YWWNPEE+LGPAALLHA R
Sbjct: 167 KRKDAPPQPGKEIPQTKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANR 226

Query: 230 WISDSRDEFKKERLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHL 284
           WI DSRD+F KERL +I  D+ KLYRC T+KNCT  CPK L+P+  I  +K + L
Sbjct: 227 WIQDSRDQFTKERLDSI-NDEFKLYRCHTIKNCTHACPKGLNPAKHIDTIKKLQL 279

[Close]
BLAST of CSPI04G04680 vs. Swiss-Prot
Match: SDHB1_ARATH (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Arabidopsis thaliana GN=SDH2-1 PE=1 SV=2)

HSP 1 Score: 321.6 bits (823), Expect = 8.8e-87
Identity = 160/260 (61.54%), Postives = 187/260 (71.92%), Query Frame = 1 

Query: 23  ARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEFKIYRWNPQYPNHKPFLHSFFLDLSKCGP 82
           AR +  +      EA  +  S     +N K F+IYRWNP  P  KP L ++ +DL  CGP
Sbjct: 21  ARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYRWNPDNPG-KPELQNYQIDLKDCGP 80

Query: 83  MVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGANTVACLKPIDADTSKPTIITPL 142
           MVLDAL KIK E D SL++RRSCREGICGSC MNIDG N +ACL  I  + S+ TI TPL
Sbjct: 81  MVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIQDEASETTI-TPL 140

Query: 143 PHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSAE-GGREFRQSPAERKKLDGLYECILCA 202
           PHMFVIKDLVVD+TNFY QYKSIEPWLK +  A    +E  QS  +R KLDG+YECILCA
Sbjct: 141 PHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAKEILQSKKDRAKLDGMYECILCA 200

Query: 203 CCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKERLQAIAEDDTKLYRCRTVKNC 262
           CCSTSCP YWWNPE +LGPAALLHA RWISDSRDE+ KERL+AI +D+ KLYRC T+ NC
Sbjct: 201 CCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAI-DDEFKLYRCHTILNC 260

Query: 263 TANCPKSLDPSSAIHHMKAM 282
              CPK L+P   I H+K +
Sbjct: 261 ARACPKGLNPGKQITHIKQL 277

[Close]
BLAST of CSPI04G04680 vs. TrEMBL
Match: A0A0A0KUA7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G028980 PE=4 SV=1)

HSP 1 Score: 620.9 bits (1600), Expect = 7.8e-175
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 1 

Query: 1   MLKRWFRHGYNKEWKQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEFKIYRWN 60
           MLKRWFRHGYNKEWKQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEFKIYRWN
Sbjct: 1   MLKRWFRHGYNKEWKQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEFKIYRWN 60

Query: 61  PQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGA 120
           PQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGA
Sbjct: 61  PQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGA 120

Query: 121 NTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE 180
           NTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE
Sbjct: 121 NTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE 180

Query: 181 FRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKE 240
           FRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKE
Sbjct: 181 FRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKE 240

Query: 241 RLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISRSNKVPNN 294
           RLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISRSNKVPNN
Sbjct: 241 RLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISRSNKVPNN 293

[Close]
BLAST of CSPI04G04680 vs. TrEMBL
Match: B9T7U2_RICCO (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Ricinus communis GN=RCOM_0325190 PE=3 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 1.6e-124
Identity = 208/293 (70.99%), Postives = 243/293 (82.94%), Query Frame = 1 

Query: 3   KRWFRHGYNKEWK---------QRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKE 62
           + W RHGYNK  +         Q F +L+  P+ +QHA+E++E +G ++ N+ +    KE
Sbjct: 9   RSWLRHGYNKIARMLGKQDPKDQNFPILKGHPVGQQHAQESVETYGTVQDNIKKLI--KE 68

Query: 63  FKIYRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSC 122
           F++YRW+P  PN+KPFL S+F+DLS CGPMVLDALQKIKAE DSSLSYRRSCREGICGSC
Sbjct: 69  FRVYRWSPDNPNNKPFLQSYFIDLSSCGPMVLDALQKIKAEDDSSLSYRRSCREGICGSC 128

Query: 123 GMNIDGANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRR 182
            MNIDG NTVACLKPIDADTS+PTIITPLPHM+VIKDLVVDLTNFY QY+SIEPWLKTR+
Sbjct: 129 SMNIDGTNTVACLKPIDADTSRPTIITPLPHMYVIKDLVVDLTNFYNQYRSIEPWLKTRK 188

Query: 183 SAEGGREFRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDS 242
             E GRE+RQSPA+RKKLDGLYECILCACCS SCP YWWNPEEFLGPA L+HAYRWISDS
Sbjct: 189 KPEDGREYRQSPADRKKLDGLYECILCACCSASCPSYWWNPEEFLGPAPLIHAYRWISDS 248

Query: 243 RDEFKKERLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISR 287
           RD+F  ERLQA+ ED  +LYRCRT+KNCTA CPKSL+P+ AIH MK  HL+S+
Sbjct: 249 RDDFTDERLQALTEDQKRLYRCRTIKNCTATCPKSLNPADAIHKMKTKHLLSQ 299

[Close]
BLAST of CSPI04G04680 vs. TrEMBL
Match: A0A067LHL7_JATCU (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Jatropha curcas GN=JCGZ_24062 PE=3 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 6.3e-124
Identity = 212/294 (72.11%), Postives = 240/294 (81.63%), Query Frame = 1 

Query: 2   LKRWFRHGYNK---------EWKQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRK 61
           + RW RHG N+           K+ F VLE  P  ++HA+E++E +  IK+N+      K
Sbjct: 4   VNRWIRHGRNRLSHIFGKETAKKENFPVLEGHPAGQEHAQESIETYDTIKTNIKRLI--K 63

Query: 62  EFKIYRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGS 121
           EFKIYRWNP  PN KPFL S+++DLS CGPMVLD LQKIKAE DSSLSYRRSCREGICGS
Sbjct: 64  EFKIYRWNPDIPNRKPFLQSYYIDLSTCGPMVLDVLQKIKAEDDSSLSYRRSCREGICGS 123

Query: 122 CGMNIDGANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTR 181
           C MNIDG NTVACLKPIDADT+KPTIITPLPHMFVIKDLVVDLTNFY QY+SIEPWLKTR
Sbjct: 124 CAMNIDGTNTVACLKPIDADTTKPTIITPLPHMFVIKDLVVDLTNFYNQYRSIEPWLKTR 183

Query: 182 RSAEGGREFRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISD 241
           +  E GRE+RQSPA+RKKLDGLYECILCACCS SCP YWW+PEEFLGPA LLHAYRWISD
Sbjct: 184 KKPEDGREYRQSPADRKKLDGLYECILCACCSASCPSYWWSPEEFLGPAPLLHAYRWISD 243

Query: 242 SRDEFKKERLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISR 287
           SRDEF +ERLQA+ ED  KLY+CRT+KNCTA CPKSL+P+ AIH MK  HL+S+
Sbjct: 244 SRDEFTEERLQALTEDTKKLYKCRTIKNCTACCPKSLNPADAIHKMKTKHLLSQ 295

[Close]
BLAST of CSPI04G04680 vs. TrEMBL
Match: M5W2C3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016428mg PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 1.8e-123
Identity = 211/296 (71.28%), Postives = 242/296 (81.76%), Query Frame = 1 

Query: 1   MLKRWFRHGYNK----------EWKQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNN 60
           M K W RHG+N+            K+ F VLE  P+A+QHAE A+E H  +K        
Sbjct: 1   MSKSWIRHGFNRVARIVGRAADPKKENFPVLEGHPVAQQHAEVALETHDTVKKKEQLL-- 60

Query: 61  RKEFKIYRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGIC 120
            KEFKIYRW+P +PN+KP+LHS+F+DLS CGPMVLDALQKIKAE DSSLSY RSCREGIC
Sbjct: 61  -KEFKIYRWSPDHPNNKPYLHSYFVDLSNCGPMVLDALQKIKAEDDSSLSYWRSCREGIC 120

Query: 121 GSCGMNIDGANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 180
           GSC MNIDG NTVACL+PIDADTSKPT ITPLPHMFVIKDLVVDLTNFYQQYK IEPWLK
Sbjct: 121 GSCSMNIDGTNTVACLRPIDADTSKPTTITPLPHMFVIKDLVVDLTNFYQQYKLIEPWLK 180

Query: 181 TRRSAEGGREFRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWI 240
           T +  + GRE+RQSP++RKKLDGLYECILCACC+TSCP YWWNPEEFLGPAALLHAYRWI
Sbjct: 181 TTKPPKDGREYRQSPSDRKKLDGLYECILCACCTTSCPSYWWNPEEFLGPAALLHAYRWI 240

Query: 241 SDSRDEFKKERLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISR 287
           +DSRDEF + RLQA+ +D T+LYRCRT+KNCTA CPKSL+P+ AI+ MK  HL+S+
Sbjct: 241 ADSRDEFTEPRLQALTDDHTRLYRCRTIKNCTATCPKSLNPADAINKMKTRHLLSQ 293

[Close]
BLAST of CSPI04G04680 vs. TrEMBL
Match: M5WPQ4_PRUPE (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Prunus persica GN=PRUPE_ppa018743mg PE=3 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 1.5e-122
Identity = 209/296 (70.61%), Postives = 244/296 (82.43%), Query Frame = 1 

Query: 1   MLKRWFRHGYNK----------EWKQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNN 60
           M K W RHG+N+            K+ F VLE  P+A+QHAE A+E H  ++    +   
Sbjct: 1   MSKSWIRHGFNRVARIVGRAADPKKENFPVLEGHPVAQQHAEVALETHDTVRK---KDRV 60

Query: 61  RKEFKIYRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGIC 120
            KEFKIYRW+P + N+KP+LHS+FLDLS CGPMVLDALQKIKAE DSSLSYRRSCREGIC
Sbjct: 61  LKEFKIYRWSPDHSNNKPYLHSYFLDLSNCGPMVLDALQKIKAEDDSSLSYRRSCREGIC 120

Query: 121 GSCGMNIDGANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 180
           GSC MNIDG NTVACL+PIDADTSKPT ITPLPHMFVIKDLVVDLTNFYQQYK IEPWLK
Sbjct: 121 GSCSMNIDGTNTVACLRPIDADTSKPTTITPLPHMFVIKDLVVDLTNFYQQYKLIEPWLK 180

Query: 181 TRRSAEGGREFRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWI 240
           T++  + GRE+RQSP++RKKLDGLYECI+CACC+TSCP YWWNPEE+ GPAALLHAYRWI
Sbjct: 181 TKKPPKDGREYRQSPSDRKKLDGLYECIVCACCTTSCPAYWWNPEEYPGPAALLHAYRWI 240

Query: 241 SDSRDEFKKERLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISR 287
           +DSRDEF ++RLQA+ E +T+LYRCRT+KNCTANCPKSL+P+ AI  MK  HL+S+
Sbjct: 241 ADSRDEFAEQRLQALTEGNTRLYRCRTIKNCTANCPKSLNPADAISKMKTRHLLSQ 293

[Close]
BLAST of CSPI04G04680 vs. TAIR10
Match: AT5G65165.1 (AT5G65165.1 succinate dehydrogenase 2-3)

HSP 1 Score: 412.5 bits (1059), Expect = 2.1e-115
Identity = 192/269 (71.38%), Postives = 222/269 (82.53%), Query Frame = 1 

Query: 18  FGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNN-RKEFKIYRWNPQYPNHKPFLHSFFLD 77
           F +L     A+  +++ +++    K    +    +KEFKIYRWNP  PN KPFL SFF+D
Sbjct: 32  FPILNGHKAAQDLSKDTLKSQDITKEKEGQHKEVKKEFKIYRWNPDKPNSKPFLQSFFVD 91

Query: 78  LSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGANTVACLKPIDADTSKP 137
           LS CGPMVLD LQKIKAE D+SLSYRRSCREGICGSC MNIDG NTVACLKPI+ +TSKP
Sbjct: 92  LSSCGPMVLDVLQKIKAEDDASLSYRRSCREGICGSCSMNIDGTNTVACLKPINPNTSKP 151

Query: 138 TIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGREFRQSPAERKKLDGLYE 197
           TIITPLPHM+VIKDLVVDLTNFYQQYKS+EPWLKTR+  + GRE RQSP +RKKLDGLYE
Sbjct: 152 TIITPLPHMYVIKDLVVDLTNFYQQYKSMEPWLKTRKPPKDGREHRQSPKDRKKLDGLYE 211

Query: 198 CILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKERLQAIAEDDTKLYRCR 257
           CILCACC+TSCP YWWNPEEF GPAALL AYRWISDSRDE+++ERLQAI E +TK+YRCR
Sbjct: 212 CILCACCTTSCPSYWWNPEEFPGPAALLQAYRWISDSRDEYREERLQAITESETKVYRCR 271

Query: 258 TVKNCTANCPKSLDPSSAIHHMKAMHLIS 286
            +KNCTA CPK L+P+SAI  MK+ HL+S
Sbjct: 272 AIKNCTATCPKGLNPASAILKMKSKHLLS 300

[Close]
BLAST of CSPI04G04680 vs. TAIR10
Match: AT5G40650.1 (AT5G40650.1 succinate dehydrogenase 2-2)

HSP 1 Score: 323.9 bits (829), Expect = 1.0e-88
Identity = 156/231 (67.53%), Postives = 178/231 (77.06%), Query Frame = 1 

Query: 52  KEFKIYRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICG 111
           K F+IYRWNP  P  KP L  + +DL  CGPMVLDAL KIK E D SL++RRSCREGICG
Sbjct: 49  KTFQIYRWNPDNPG-KPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICG 108

Query: 112 SCGMNIDGANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKT 171
           SC MNIDG N +ACL  I++  SK T ITPLPHMFVIKDLVVD+TNFY QYKSIEPWLK 
Sbjct: 109 SCAMNIDGCNGLACLTKIESG-SKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 168

Query: 172 RRSAE-GGREFRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWI 231
           +  A   G+E  QS  +R KLDG+YECILCACCSTSCP YWWNPE +LGPAALLHA RWI
Sbjct: 169 KNPASVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWI 228

Query: 232 SDSRDEFKKERLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAM 282
           SDSRDE+ KERL+AI +D+ KLYRC T+ NC   CPK L+P   I H+K +
Sbjct: 229 SDSRDEYTKERLEAI-DDEFKLYRCHTILNCARACPKGLNPGKQITHIKQL 276

[Close]
BLAST of CSPI04G04680 vs. TAIR10
Match: AT3G27380.1 (AT3G27380.1 succinate dehydrogenase 2-1)

HSP 1 Score: 321.6 bits (823), Expect = 4.9e-88
Identity = 160/260 (61.54%), Postives = 187/260 (71.92%), Query Frame = 1 

Query: 23  ARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEFKIYRWNPQYPNHKPFLHSFFLDLSKCGP 82
           AR +  +      EA  +  S     +N K F+IYRWNP  P  KP L ++ +DL  CGP
Sbjct: 21  ARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYRWNPDNPG-KPELQNYQIDLKDCGP 80

Query: 83  MVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGANTVACLKPIDADTSKPTIITPL 142
           MVLDAL KIK E D SL++RRSCREGICGSC MNIDG N +ACL  I  + S+ TI TPL
Sbjct: 81  MVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIQDEASETTI-TPL 140

Query: 143 PHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSAE-GGREFRQSPAERKKLDGLYECILCA 202
           PHMFVIKDLVVD+TNFY QYKSIEPWLK +  A    +E  QS  +R KLDG+YECILCA
Sbjct: 141 PHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAKEILQSKKDRAKLDGMYECILCA 200

Query: 203 CCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKERLQAIAEDDTKLYRCRTVKNC 262
           CCSTSCP YWWNPE +LGPAALLHA RWISDSRDE+ KERL+AI +D+ KLYRC T+ NC
Sbjct: 201 CCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAI-DDEFKLYRCHTILNC 260

Query: 263 TANCPKSLDPSSAIHHMKAM 282
              CPK L+P   I H+K +
Sbjct: 261 ARACPKGLNPGKQITHIKQL 277

[Close]
BLAST of CSPI04G04680 vs. NCBI nr
Match: gi|449458373|ref|XP_004146922.1| (PREDICTED: succinate dehydrogenase [ubiquinone])

HSP 1 Score: 620.9 bits (1600), Expect = 1.1e-174
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 1 

Query: 1   MLKRWFRHGYNKEWKQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEFKIYRWN 60
           MLKRWFRHGYNKEWKQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEFKIYRWN
Sbjct: 1   MLKRWFRHGYNKEWKQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEFKIYRWN 60

Query: 61  PQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGA 120
           PQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGA
Sbjct: 61  PQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGA 120

Query: 121 NTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE 180
           NTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE
Sbjct: 121 NTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE 180

Query: 181 FRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKE 240
           FRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKE
Sbjct: 181 FRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKE 240

Query: 241 RLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISRSNKVPNN 294
           RLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISRSNKVPNN
Sbjct: 241 RLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISRSNKVPNN 293

[Close]
BLAST of CSPI04G04680 vs. NCBI nr
Match: gi|659108955|ref|XP_008454472.1| (PREDICTED: succinate dehydrogenase [ubiquinone])

HSP 1 Score: 573.5 bits (1477), Expect = 2.0e-160
Identity = 273/293 (93.17%), Postives = 280/293 (95.56%), Query Frame = 1 

Query: 1   MLKRWFRHGYNKEWKQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEFKIYRWN 60
           MLK WFRH YNK  KQRFGVLE  PMAKQHAEEAMEAHGEIKSNL  FNN+KEFKIYRWN
Sbjct: 1   MLKSWFRHAYNKVSKQRFGVLEEHPMAKQHAEEAMEAHGEIKSNL-RFNNQKEFKIYRWN 60

Query: 61  PQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGA 120
           PQYPNHKPFLHSFFLDLSKCGPMVLDALQ IKAEKDSSLSYRRSCREGICGSC MNIDGA
Sbjct: 61  PQYPNHKPFLHSFFLDLSKCGPMVLDALQMIKAEKDSSLSYRRSCREGICGSCAMNIDGA 120

Query: 121 NTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE 180
           NTVACLKPIDADTSKPTIITPLPHM+VIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE
Sbjct: 121 NTVACLKPIDADTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE 180

Query: 181 FRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKE 240
           FRQ+PAERKKLDGLYECILCACCS SCPPYWWNPEEF+GPAALLHAYRWISDSRDEFKKE
Sbjct: 181 FRQTPAERKKLDGLYECILCACCSASCPPYWWNPEEFIGPAALLHAYRWISDSRDEFKKE 240

Query: 241 RLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISRSNKVPNN 294
           RLQAIAED TKLYRCRTV+NCTANCPKSLDPSSAIH+MKAMHLI RSNKVPN+
Sbjct: 241 RLQAIAEDKTKLYRCRTVQNCTANCPKSLDPSSAIHNMKAMHLIFRSNKVPNH 292

[Close]
BLAST of CSPI04G04680 vs. NCBI nr
Match: gi|659108953|ref|XP_008454471.1| (PREDICTED: succinate dehydrogenase [ubiquinone])

HSP 1 Score: 567.8 bits (1462), Expect = 1.1e-158
Identity = 270/288 (93.75%), Postives = 277/288 (96.18%), Query Frame = 1 

Query: 1   MLKRWFRHGYNKEWKQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEFKIYRWN 60
           MLK WFRH YNK  K+RFGVLE  P+AKQHAEEAMEAHGEIKSNL  FNN+KEFKIYRWN
Sbjct: 1   MLKGWFRHAYNKVSKKRFGVLEEHPIAKQHAEEAMEAHGEIKSNL-RFNNQKEFKIYRWN 60

Query: 61  PQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGA 120
           PQYPNHKPFLHSFFLDLSKCGPMVLDALQ IKAEKDSSLSYRRSCREGICGSC MNIDGA
Sbjct: 61  PQYPNHKPFLHSFFLDLSKCGPMVLDALQMIKAEKDSSLSYRRSCREGICGSCAMNIDGA 120

Query: 121 NTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE 180
           NTVACLKPIDADTSKPTIITPLPHM+VIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE
Sbjct: 121 NTVACLKPIDADTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE 180

Query: 181 FRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKE 240
           FRQ+PAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFK+E
Sbjct: 181 FRQTPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKEE 240

Query: 241 RLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISRSN 289
           RLQAIAED+TKLYRCRTVKNCTA CPKSLDPSSAIHHMKAMHLISRSN
Sbjct: 241 RLQAIAEDETKLYRCRTVKNCTATCPKSLDPSSAIHHMKAMHLISRSN 287

[Close]
BLAST of CSPI04G04680 vs. NCBI nr
Match: gi|645219041|ref|XP_008233735.1| (PREDICTED: succinate dehydrogenase [ubiquinone])

HSP 1 Score: 454.1 bits (1167), Expect = 1.8e-124
Identity = 211/296 (71.28%), Postives = 245/296 (82.77%), Query Frame = 1 

Query: 1   MLKRWFRHGYNK----------EWKQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNN 60
           M K W RHG+N+            K+ F VLE  P+A+QHAE A+E H  ++        
Sbjct: 1   MSKSWIRHGFNRVARIVGRAADPKKENFPVLEGHPVAQQHAEVALETHDTVRKKDQVL-- 60

Query: 61  RKEFKIYRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGIC 120
            KEFKIYRW+P +PN+KP+LHS+F+DLS CGPMVLDALQKIKAE DSSLSYRRSCREGIC
Sbjct: 61  -KEFKIYRWSPDHPNNKPYLHSYFVDLSNCGPMVLDALQKIKAEDDSSLSYRRSCREGIC 120

Query: 121 GSCGMNIDGANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 180
           GSC MNIDG NTVACL+PIDADTSKPT ITPLPHMFVIKDLVVDLTNFYQQYK IEPWLK
Sbjct: 121 GSCSMNIDGTNTVACLRPIDADTSKPTTITPLPHMFVIKDLVVDLTNFYQQYKLIEPWLK 180

Query: 181 TRRSAEGGREFRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWI 240
           T++  + GRE+RQSP+ERKKLDGLYECI+CACC+TSCP YWWNPEE+ GPAALLHAYRWI
Sbjct: 181 TKKPPKDGREYRQSPSERKKLDGLYECIVCACCTTSCPAYWWNPEEYPGPAALLHAYRWI 240

Query: 241 SDSRDEFKKERLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISR 287
           +DSRDEF ++RLQA+ ED+T+LYRCRT+KNCTANCPKSL+P+ AI  MK  HL+S+
Sbjct: 241 ADSRDEFTEQRLQALTEDNTRLYRCRTIKNCTANCPKSLNPADAISKMKTRHLLSQ 293

[Close]
BLAST of CSPI04G04680 vs. NCBI nr
Match: gi|255587559|ref|XP_002534311.1| (PREDICTED: succinate dehydrogenase [ubiquinone])

HSP 1 Score: 453.8 bits (1166), Expect = 2.4e-124
Identity = 208/293 (70.99%), Postives = 243/293 (82.94%), Query Frame = 1 

Query: 3   KRWFRHGYNKEWK---------QRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKE 62
           + W RHGYNK  +         Q F +L+  P+ +QHA+E++E +G ++ N+ +    KE
Sbjct: 9   RSWLRHGYNKIARMLGKQDPKDQNFPILKGHPVGQQHAQESVETYGTVQDNIKKLI--KE 68

Query: 63  FKIYRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSC 122
           F++YRW+P  PN+KPFL S+F+DLS CGPMVLDALQKIKAE DSSLSYRRSCREGICGSC
Sbjct: 69  FRVYRWSPDNPNNKPFLQSYFIDLSSCGPMVLDALQKIKAEDDSSLSYRRSCREGICGSC 128

Query: 123 GMNIDGANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRR 182
            MNIDG NTVACLKPIDADTS+PTIITPLPHM+VIKDLVVDLTNFY QY+SIEPWLKTR+
Sbjct: 129 SMNIDGTNTVACLKPIDADTSRPTIITPLPHMYVIKDLVVDLTNFYNQYRSIEPWLKTRK 188

Query: 183 SAEGGREFRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDS 242
             E GRE+RQSPA+RKKLDGLYECILCACCS SCP YWWNPEEFLGPA L+HAYRWISDS
Sbjct: 189 KPEDGREYRQSPADRKKLDGLYECILCACCSASCPSYWWNPEEFLGPAPLIHAYRWISDS 248

Query: 243 RDEFKKERLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISR 287
           RD+F  ERLQA+ ED  +LYRCRT+KNCTA CPKSL+P+ AIH MK  HL+S+
Sbjct: 249 RDDFTDERLQALTEDQKRLYRCRTIKNCTATCPKSLNPADAIHKMKTKHLLSQ 299

The following BLAST results are available for this feature:
BLAST of CSPI04G04680 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SDHB3_ARATH3.8e-11471.38Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial OS=Ara... [more]
SDHB2_ORYSJ3.8e-9858.25Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Ory... [more]
SDHB2_ARATH1.8e-8767.53Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Ara... [more]
SDHB1_ORYSJ3.9e-8765.11Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Ory... [more]
SDHB1_ARATH8.8e-8761.54Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Ara... [more]
BLAST of CSPI04G04680 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUA7_CUCSA7.8e-175100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G028980 PE=4 SV=1[more]
B9T7U2_RICCO1.6e-12470.99Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Ricin... [more]
A0A067LHL7_JATCU6.3e-12472.11Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Jatro... [more]
M5W2C3_PRUPE1.8e-12371.28Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016428mg PE=4 SV=1[more]
M5WPQ4_PRUPE1.5e-12270.61Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Prunu... [more]
BLAST of CSPI04G04680 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G65165.12.1e-11571.38 succinate dehydrogenase 2-3[more]
AT5G40650.11.0e-8867.53 succinate dehydrogenase 2-2[more]
AT3G27380.14.9e-8861.54 succinate dehydrogenase 2-1[more]
BLAST of CSPI04G04680 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449458373|ref|XP_004146922.1|1.1e-174100.00PREDICTED: succinate dehydrogenase [ubiquinone][more]
gi|659108955|ref|XP_008454472.1|2.0e-16093.17PREDICTED: succinate dehydrogenase [ubiquinone][more]
gi|659108953|ref|XP_008454471.1|1.1e-15893.75PREDICTED: succinate dehydrogenase [ubiquinone][more]
gi|645219041|ref|XP_008233735.1|1.8e-12471.28PREDICTED: succinate dehydrogenase [ubiquinone][more]
gi|255587559|ref|XP_002534311.1|2.4e-12470.99PREDICTED: succinate dehydrogenase [ubiquinone][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR0010412Fe-2S_ferredoxin-type
IPR004489Succ_DH/fum_Rdtase_Fe-S
IPR0060582Fe2S_fd_BS
IPR009051Helical_ferredxn
IPR012675Beta-grasp_dom_sf
IPR0178964Fe4S_Fe-S-bd
IPR0179004Fe4S_Fe_S_CS
IPR025192Succ_DH/fum_Rdtase_N
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron carrier activity
GO:0051536iron-sulfur cluster binding
GO:0016491oxidoreductase activity
GO:00515372 iron, 2 sulfur cluster binding
Vocabulary: Biological Process
TermDefinition
GO:0006099tricarboxylic acid cycle
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006119 oxidative phosphorylation
biological_process GO:0006099 tricarboxylic acid cycle
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0022900 electron transport chain
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0045281 succinate dehydrogenase complex
cellular_component GO:0045273 respiratory chain complex II
cellular_component GO:0005575 cellular_component
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0051538 3 iron, 4 sulfur cluster binding
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008177 succinate dehydrogenase (ubiquinone) activity
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0016491 oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G04680.1CSPI04G04680.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainunknownSSF542922Fe-2S ferredoxin-likecoord: 52..154
score: 2.22
IPR004489Succinate dehydrogenase/fumarate reductase iron-sulphur proteinTIGRFAMsTIGR00384TIGR00384coord: 56..279
score: 1.0
IPR0060582Fe-2S ferredoxin, iron-sulphur binding sitePROSITEPS001972FE2S_FER_1coord: 105..113
scor
IPR009051Alpha-helical ferredoxinunknownSSF46548alpha-helical ferredoxincoord: 156..282
score: 5.06
IPR012675Beta-grasp domainGENE3DG3DSA:3.10.20.30coord: 49..154
score: 1.2
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainPROFILEPS513794FE4S_FER_2coord: 187..217
score: 7
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved sitePROSITEPS001984FE4S_FER_1coord: 197..208
scor
IPR025192Succinate dehydogenase/fumarate reductase N-terminalPFAMPF13085Fer2_3coord: 54..159
score: 1.1
NoneNo IPR availableunknownCoilCoilcoord: 31..51
scor
NoneNo IPR availableGENE3DG3DSA:1.10.1060.10coord: 156..283
score: 8.6
NoneNo IPR availablePANTHERPTHR11921SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEINcoord: 8..286
score: 4.7E
NoneNo IPR availablePANTHERPTHR11921:SF23SUCCINATE DEHYDROGENASE [UBIQUINONE] IRON-SULFUR SUBUNIT 3, MITOCHONDRIALcoord: 8..286
score: 4.7E
NoneNo IPR availablePFAMPF13534Fer4_17coord: 196..270
score: 3.