CsGy3G033970 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G033970
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	VQ motif-containing protein 25-like
Location	Chr3 : 32805668 .. 32806186 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCCATTCTGATCAAGAAGCAACGCCAACGCCCTCATCTCTTGCCCACCTCCGCTCGCCCCTCCTCCATGGCTCTTCACTCAGCTTCCCACCCCATTTCCAAGCCCAAGCCCAAAATTCGCATCATTCACATCTTCGCACCGGAGATCATTAAAACCGACGTCGCCAATTTCAGAGAGCTCGTTCAGAGGCTCACCGGAAAGCCAGAAGCAACGGAGGACGGCAAGATTCTTCCCCCTGAAATTCCGCCTGCGGCTGCGTTCGATAATCGGAAGACGGAGATAGTCAGCGGCGTGGGGTGCCGGAGAAGAATGGTGAAGAAGGAAGACGAGTATCAAGAAGAAGACGAAGAAGAAGAAGAAGACGAAGAAGAAGAAGAGATGTTAGAGGACGTGGTTGGGATGTGGAACGACGTCGTCGGATTTGAAGGGTTTATCCAAGAATTGGGTGAATTCCCGTTGATTCCTTCGGCTCATCAAATAATGCATGGTTTTGAAGAGACTCAATTTGCTTAA

mRNA sequence

ATGGAAGCCATTCTGATCAAGAAGCAACGCCAACGCCCTCATCTCTTGCCCACCTCCGCTCGCCCCTCCTCCATGGCTCTTCACTCAGCTTCCCACCCCATTTCCAAGCCCAAGCCCAAAATTCGCATCATTCACATCTTCGCACCGGAGATCATTAAAACCGACGTCGCCAATTTCAGAGAGCTCGTTCAGAGGCTCACCGGAAAGCCAGAAGCAACGGAGGACGGCAAGATTCTTCCCCCTGAAATTCCGCCTGCGGCTGCGTTCGATAATCGGAAGACGGAGATAGTCAGCGGCGTGGGGTGCCGGAGAAGAATGGTGAAGAAGGAAGACGAGTATCAAGAAGAAGACGAAGAAGAAGAAGAAGACGAAGAAGAAGAAGAGATGTTAGAGGACGTGGTTGGGATGTGGAACGACGTCGTCGGATTTGAAGGGTTTATCCAAGAATTGGGTGAATTCCCGTTGATTCCTTCGGCTCATCAAATAATGCATGGTTTTGAAGAGACTCAATTTGCTTAA

Coding sequence (CDS)

ATGGAAGCCATTCTGATCAAGAAGCAACGCCAACGCCCTCATCTCTTGCCCACCTCCGCTCGCCCCTCCTCCATGGCTCTTCACTCAGCTTCCCACCCCATTTCCAAGCCCAAGCCCAAAATTCGCATCATTCACATCTTCGCACCGGAGATCATTAAAACCGACGTCGCCAATTTCAGAGAGCTCGTTCAGAGGCTCACCGGAAAGCCAGAAGCAACGGAGGACGGCAAGATTCTTCCCCCTGAAATTCCGCCTGCGGCTGCGTTCGATAATCGGAAGACGGAGATAGTCAGCGGCGTGGGGTGCCGGAGAAGAATGGTGAAGAAGGAAGACGAGTATCAAGAAGAAGACGAAGAAGAAGAAGAAGACGAAGAAGAAGAAGAGATGTTAGAGGACGTGGTTGGGATGTGGAACGACGTCGTCGGATTTGAAGGGTTTATCCAAGAATTGGGTGAATTCCCGTTGATTCCTTCGGCTCATCAAATAATGCATGGTTTTGAAGAGACTCAATTTGCTTAA

Protein sequence

MEAILIKKQRQRPHLLPTSARPSSMALHSASHPISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKPEATEDGKILPPEIPPAAAFDNRKTEIVSGVGCRRRMVKKEDEYQEEDEEEEEDEEEEEMLEDVVGMWNDVVGFEGFIQELGEFPLIPSAHQIMHGFEETQFA

Homology

[Close]

BLAST of CsGy3G033970 vs. NCBI nr
Match: XP_004136735.1 (PREDICTED: VQ motif-containing protein 25-like [Cucumis sativus])

HSP 1 Score: 276.9 bits (707), Expect = 4.5e-71
Identity = 165/172 (95.93%), Postives = 165/172 (95.93%), Query Frame = 0


Query: 1   MEAILIKKQRQRPHLLPTSARPSSMALHSASHPISKPKPKIRIIHIFAPEIIKTDVANFR 60
           MEAILIKKQRQRPHLLPTSARPSSMALHSASHPISKPKPKIRIIHIFAPEIIKTDVANFR
Sbjct: 1   MEAILIKKQRQRPHLLPTSARPSSMALHSASHPISKPKPKIRIIHIFAPEIIKTDVANFR 60

Query: 61  ELVQRLTGKPEATEDGKILPPEIPPAAAFDNRKTEIVSGVGCRXXXXXXXXXXXXXXXXX 120
           ELVQRLTGKPEATEDGKILPPEIPPAAAFDNRKTEIVSGVGCR      XXXXXXXXXXX
Sbjct: 61  ELVQRLTGKPEATEDGKILPPEIPPAAAFDNRKTEIVSGVGCR------XXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXDVVGMWNDVVGFEGFIQELGEFPLIPSAHQIMHGFEETQFA 173
           XXXXXXXXXX DVVGMWNDVVGFEGFIQELGEFPLIPSAHQIMHGFEETQFA
Sbjct: 121 XXXXXXXXXXEDVVGMWNDVVGFEGFIQELGEFPLIPSAHQIMHGFEETQFA 166

[Close]

BLAST of CsGy3G033970 vs. NCBI nr
Match: KGN59305.1 (hypothetical protein Csa_3G807350 [Cucumis sativus])

HSP 1 Score: 239.2 bits (609), Expect = 1.0e-59
Identity = 147/154 (95.45%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 1   MEAILIKKQRQRPHLLPTSARPSSMALHSASHPISKPKPKIRIIHIFAPEIIKTDVANFR 60
           MEAILIKKQRQRPHLLPTSARPSSMALHSASHPISKPKPKIRIIHIFAPEIIKTDVANFR
Sbjct: 1   MEAILIKKQRQRPHLLPTSARPSSMALHSASHPISKPKPKIRIIHIFAPEIIKTDVANFR 60

Query: 61  ELVQRLTGKPEATEDGKILPPEIPPAAAFDNRKTEIVSGVGCRXXXXXXXXXXXXXXXXX 120
           ELVQRLTGKPEATEDGKILPPEIPPAAAFDNRKTEIVSGVGCR      XXXXXXXXXXX
Sbjct: 61  ELVQRLTGKPEATEDGKILPPEIPPAAAFDNRKTEIVSGVGCR------XXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXDVVGMWNDVVGFEGFIQELGEFP 155
           XXXXXXXXXX DVVGMWNDVVGFEGFIQELGEFP
Sbjct: 121 XXXXXXXXXXEDVVGMWNDVVGFEGFIQELGEFP 148

[Close]

BLAST of CsGy3G033970 vs. NCBI nr
Match: XP_008443061.1 (PREDICTED: VQ motif-containing protein 25-like [Cucumis melo])

HSP 1 Score: 223.0 bits (567), Expect = 7.7e-55
Identity = 149/180 (82.78%), Postives = 157/180 (87.22%), Query Frame = 0


Query: 1   MEAILIKKQRQRPHLLPTSARPSSMALHSASHPISKPKPKIRIIHIFAPEIIKTDVANFR 60
           M+AIL K QRQRPHLLPTS RPS+M LHSASH ISKPKPKIRIIHIFAPEIIKTDVANFR
Sbjct: 1   MDAIL-KNQRQRPHLLPTSPRPSTMPLHSASHAISKPKPKIRIIHIFAPEIIKTDVANFR 60

Query: 61  ELVQRLTGKPEA--TEDGKILPPEIPPAAAFDNRKTEIVSGVGCR-------XXXXXXXX 120
           ELVQRLTGKPEA  T++ KILPP+IP AAAFDNRKTE+VS   CR       XXXXXXXX
Sbjct: 61  ELVQRLTGKPEAITTQEDKILPPQIPAAAAFDNRKTEMVS---CRRMVKKXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXDVVGMWNDVVGFEGFIQELGEFPLIPSAHQIMHGFEETQF 172
           XXXXXXXXXXXXXXXXX   +VVGMWNDVVGFEGFIQELGEFPLIPSAHQIMHGFE+T F
Sbjct: 121 XXXXXXXXXXXXXXXXXMLDEVVGMWNDVVGFEGFIQELGEFPLIPSAHQIMHGFEDTHF 176

[Close]

BLAST of CsGy3G033970 vs. NCBI nr
Match: XP_022983122.1 (VQ motif-containing protein 25-like [Cucurbita maxima])

HSP 1 Score: 195.3 bits (495), Expect = 1.7e-46
Identity = 133/178 (74.72%), Postives = 146/178 (82.02%), Query Frame = 0


Query: 1   MEAILIKKQRQRPHLLPTSARPSSMALHSASHPISKPKPKIRIIHIFAPEIIKTDVANFR 60
           MEAI+ K+      LL  SARP +MALH+ASH ISKPKPKIRIIHIFAPEIIKTDVANFR
Sbjct: 1   MEAIMKKRA-----LLQNSARPGAMALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFR 60

Query: 61  ELVQRLTGKPEATEDGKILPPEIPPAA------AFDNRKTEIVSGVGCRXXXXXXXXXXX 120
           ELVQRLTGKP AT + KI+PP+IPPAA      AFD+RK+E + G  CR     XXXXXX
Sbjct: 61  ELVQRLTGKP-ATAEEKIVPPQIPPAAVADVATAFDHRKSE-MGGGECR-RVKTXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXDVVGMWNDVVGFEGFIQELGEFPLIPSAHQIMHGFEETQFA 173
           XXXXXXXXXXXXXXX  DVVG+WNDVVGFEGFI+ELGE PL+PSAHQIMHGFEETQFA
Sbjct: 121 XXXXXXXXXXXXXXXLSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGFEETQFA 170

[Close]

BLAST of CsGy3G033970 vs. NCBI nr
Match: XP_022935342.1 (VQ motif-containing protein 25-like [Cucurbita moschata])

HSP 1 Score: 193.0 bits (489), Expect = 8.6e-46
Identity = 129/178 (72.47%), Postives = 144/178 (80.90%), Query Frame = 0


Query: 1   MEAILIKKQRQRPHLLPTSARPSSMALHSASHPISKPKPKIRIIHIFAPEIIKTDVANFR 60
           MEAI+ K+      LL  SARP++MA+H+ASH ISKPKPKIRIIHIFAPEIIKTDVANFR
Sbjct: 1   MEAIMKKRA-----LLQNSARPAAMAVHAASHAISKPKPKIRIIHIFAPEIIKTDVANFR 60

Query: 61  ELVQRLTGKPEATEDGKILPPEIPP------AAAFDNRKTEIVSGVGCRXXXXXXXXXXX 120
           ELVQRLTGKP AT + KI+PP+IPP      A AFD+RK+E + G  CR       XXXX
Sbjct: 61  ELVQRLTGKP-ATAEEKIVPPQIPPVAVADIATAFDHRKSE-MGGGECR---RVKTXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXDVVGMWNDVVGFEGFIQELGEFPLIPSAHQIMHGFEETQFA 173
           XXXXXXXXXXXXXXX  DVVG+WNDVVGFEGFI+ELGE PL+PSAHQIMHGFEETQFA
Sbjct: 121 XXXXXXXXXXXXXXXLSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGFEETQFA 168

[Close]

BLAST of CsGy3G033970 vs. TAIR10
Match: AT3G58000.1 (VQ motif-containing protein)

HSP 1 Score: 94.4 bits (233), Expect = 7.5e-20
Identity = 62/157 (39.49%), Postives = 78/157 (49.68%), Query Frame = 0


Query: 1   MEAILIKKQRQRPHLLPTSARPSSMALHSASHPISKPKPKIRIIHIFAPEIIKTDVANFR 60
           MEA + +K+R         +  SS+A+H  S+ I+K KPKIRIIHIFAPEIIKTDVANFR
Sbjct: 1   MEATIFEKRR---------SSLSSIAVHKQSYSITKSKPKIRIIHIFAPEIIKTDVANFR 60

Query: 61  ELVQRLTGKPEATEDGKILPPEIPPAAAFDNRKTEIVSGVGCRXXXXXXXXXXXXXXXXX 120
           ELVQ LTGKP+     K  P           +  ++++    R                 
Sbjct: 61  ELVQSLTGKPDDQRTSKAKPRR--DMHRLHRQVQDMINTEKLREPEHCDQEFCLNAEELS 120

Query: 121 XXXXXXXXXXXDVVGMWNDVVGFEGFIQELGEFPLIP 158
                         G  N +  FEGFIQELGEFP +P
Sbjct: 121 MTWNGNNGAGESSGGFLNGLGDFEGFIQELGEFPYLP 146

[Close]

BLAST of CsGy3G033970 vs. TAIR10
Match: AT2G42140.1 (VQ motif-containing protein)

HSP 1 Score: 78.6 bits (192), Expect = 4.3e-15
Identity = 56/157 (35.67%), Postives = 72/157 (45.86%), Query Frame = 0


Query: 1   MEAILIKKQRQRPHLLPTSARPSSMALHSASHPISKPKPKIRIIHIFAPEIIKTDVANFR 60
           +EA  ++K+R  P          ++A+H  S  ++K KPKIRIIHIFAPEIIKTDVANFR
Sbjct: 3   IEATTVQKRRSLP----------TIAMHKQSRTLTKSKPKIRIIHIFAPEIIKTDVANFR 62

Query: 61  ELVQRLTGKPEATEDGKILPPEIPPAAAFDNRKTEIVSGVGCRXXXXXXXXXXXXXXXXX 120
           E+VQ LTGK +       LP +        +R       V                    
Sbjct: 63  EIVQNLTGKQDHHHHD--LPHQKGLKRNPRSRXXXXXXXVHDMNKSHGFCINSDEEEEGM 122

Query: 121 XXXXXXXXXXXDVVGMWNDVVGFEGFIQELGEFPLIP 158
                         G  N +   +GFIQELGEFP +P
Sbjct: 123 VSMTWNGNGDESSGGFLNGLGDLDGFIQELGEFPYLP 147

[Close]

BLAST of CsGy3G033970 vs. TAIR10
Match: AT3G60090.1 (VQ motif-containing protein)

HSP 1 Score: 68.9 bits (167), Expect = 3.4e-12
Identity = 35/50 (70.00%), Postives = 39/50 (78.00%), Query Frame = 0


Query: 27 LHSASHPISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKPEATEDG 77
          ++  S  I+K KPKIRIIHIFAPEII TDV NFR LVQ LTGKPE T+ G
Sbjct: 31 MNKNSQIITKIKPKIRIIHIFAPEIINTDVKNFRTLVQSLTGKPEITKTG 80

[Close]

BLAST of CsGy3G033970 vs. TAIR10
Match: AT2G44340.1 (VQ motif-containing protein)

HSP 1 Score: 68.2 bits (165), Expect = 5.8e-12
Identity = 35/52 (67.31%), Postives = 40/52 (76.92%), Query Frame = 0


Query: 23 SSMALHSASHPISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKPEATE 75
          S ++++  S  ISK KPKIRIIHIFAPE+IKTDV NFR LVQ LTGKP   E
Sbjct: 15 SRVSMNRNSQVISKIKPKIRIIHIFAPEVIKTDVKNFRSLVQSLTGKPAPGE 66

[Close]

BLAST of CsGy3G033970 vs. Swiss-Prot
Match: sp|Q9M2P8|VQ25_ARATH (VQ motif-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=VQ25 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.4e-18
Identity = 62/157 (39.49%), Postives = 78/157 (49.68%), Query Frame = 0


Query: 1   MEAILIKKQRQRPHLLPTSARPSSMALHSASHPISKPKPKIRIIHIFAPEIIKTDVANFR 60
           MEA + +K+R         +  SS+A+H  S+ I+K KPKIRIIHIFAPEIIKTDVANFR
Sbjct: 1   MEATIFEKRR---------SSLSSIAVHKQSYSITKSKPKIRIIHIFAPEIIKTDVANFR 60

Query: 61  ELVQRLTGKPEATEDGKILPPEIPPAAAFDNRKTEIVSGVGCRXXXXXXXXXXXXXXXXX 120
           ELVQ LTGKP+     K  P           +  ++++    R                 
Sbjct: 61  ELVQSLTGKPDDQRTSKAKPRR--DMHRLHRQVQDMINTEKLREPEHCDQEFCLNAEELS 120

Query: 121 XXXXXXXXXXXDVVGMWNDVVGFEGFIQELGEFPLIP 158
                         G  N +  FEGFIQELGEFP +P
Sbjct: 121 MTWNGNNGAGESSGGFLNGLGDFEGFIQELGEFPYLP 146

[Close]

BLAST of CsGy3G033970 vs. Swiss-Prot
Match: sp|O48522|VQ17_ARATH (VQ motif-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=VQ17 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 7.7e-14
Identity = 56/157 (35.67%), Postives = 72/157 (45.86%), Query Frame = 0


Query: 1   MEAILIKKQRQRPHLLPTSARPSSMALHSASHPISKPKPKIRIIHIFAPEIIKTDVANFR 60
           +EA  ++K+R  P          ++A+H  S  ++K KPKIRIIHIFAPEIIKTDVANFR
Sbjct: 3   IEATTVQKRRSLP----------TIAMHKQSRTLTKSKPKIRIIHIFAPEIIKTDVANFR 62

Query: 61  ELVQRLTGKPEATEDGKILPPEIPPAAAFDNRKTEIVSGVGCRXXXXXXXXXXXXXXXXX 120
           E+VQ LTGK +       LP +        +R       V                    
Sbjct: 63  EIVQNLTGKQDHHHHD--LPHQKGLKRNPRSRXXXXXXXVHDMNKSHGFCINSDEEEEGM 122

Query: 121 XXXXXXXXXXXDVVGMWNDVVGFEGFIQELGEFPLIP 158
                         G  N +   +GFIQELGEFP +P
Sbjct: 123 VSMTWNGNGDESSGGFLNGLGDLDGFIQELGEFPYLP 147

[Close]

BLAST of CsGy3G033970 vs. Swiss-Prot
Match: sp|O64868|VQ18_ARATH (VQ motif-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=VQ18 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.0e-10
Identity = 35/52 (67.31%), Postives = 40/52 (76.92%), Query Frame = 0


Query: 23 SSMALHSASHPISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKPEATE 75
          S ++++  S  ISK KPKIRIIHIFAPE+IKTDV NFR LVQ LTGKP   E
Sbjct: 15 SRVSMNRNSQVISKIKPKIRIIHIFAPEVIKTDVKNFRSLVQSLTGKPAPGE 66

[Close]

BLAST of CsGy3G033970 vs. TrEMBL
Match: tr|A0A0A0LBB1|A0A0A0LBB1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G807350 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 6.9e-60
Identity = 147/154 (95.45%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 1   MEAILIKKQRQRPHLLPTSARPSSMALHSASHPISKPKPKIRIIHIFAPEIIKTDVANFR 60
           MEAILIKKQRQRPHLLPTSARPSSMALHSASHPISKPKPKIRIIHIFAPEIIKTDVANFR
Sbjct: 1   MEAILIKKQRQRPHLLPTSARPSSMALHSASHPISKPKPKIRIIHIFAPEIIKTDVANFR 60

Query: 61  ELVQRLTGKPEATEDGKILPPEIPPAAAFDNRKTEIVSGVGCRXXXXXXXXXXXXXXXXX 120
           ELVQRLTGKPEATEDGKILPPEIPPAAAFDNRKTEIVSGVGCR      XXXXXXXXXXX
Sbjct: 61  ELVQRLTGKPEATEDGKILPPEIPPAAAFDNRKTEIVSGVGCR------XXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXDVVGMWNDVVGFEGFIQELGEFP 155
           XXXXXXXXXX DVVGMWNDVVGFEGFIQELGEFP
Sbjct: 121 XXXXXXXXXXEDVVGMWNDVVGFEGFIQELGEFP 148

[Close]

BLAST of CsGy3G033970 vs. TrEMBL
Match: tr|A0A1S3B6P9|A0A1S3B6P9_CUCME (VQ motif-containing protein 25-like OS=Cucumis melo OX=3656 GN=LOC103486769 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 5.1e-55
Identity = 149/180 (82.78%), Postives = 157/180 (87.22%), Query Frame = 0


Query: 1   MEAILIKKQRQRPHLLPTSARPSSMALHSASHPISKPKPKIRIIHIFAPEIIKTDVANFR 60
           M+AIL K QRQRPHLLPTS RPS+M LHSASH ISKPKPKIRIIHIFAPEIIKTDVANFR
Sbjct: 1   MDAIL-KNQRQRPHLLPTSPRPSTMPLHSASHAISKPKPKIRIIHIFAPEIIKTDVANFR 60

Query: 61  ELVQRLTGKPEA--TEDGKILPPEIPPAAAFDNRKTEIVSGVGCR-------XXXXXXXX 120
           ELVQRLTGKPEA  T++ KILPP+IP AAAFDNRKTE+VS   CR       XXXXXXXX
Sbjct: 61  ELVQRLTGKPEAITTQEDKILPPQIPAAAAFDNRKTEMVS---CRRMVKKXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXDVVGMWNDVVGFEGFIQELGEFPLIPSAHQIMHGFEETQF 172
           XXXXXXXXXXXXXXXXX   +VVGMWNDVVGFEGFIQELGEFPLIPSAHQIMHGFE+T F
Sbjct: 121 XXXXXXXXXXXXXXXXXMLDEVVGMWNDVVGFEGFIQELGEFPLIPSAHQIMHGFEDTHF 176

[Close]

BLAST of CsGy3G033970 vs. TrEMBL
Match: tr|A0A061EXT4|A0A061EXT4_THECC (VQ motif-containing protein, putative OS=Theobroma cacao OX=3641 GN=TCM_024904 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.6e-22
Identity = 80/181 (44.20%), Postives = 93/181 (51.38%), Query Frame = 0


Query: 1   MEAILIKKQRQRPHLLPTSARPSSMALHSASHPISKPKPKIRIIHIFAPEIIKTDVANFR 60
           ME I+I+ Q + P      + PS++++H  S  ISK KPKIRIIHIFAPEIIKTDVANFR
Sbjct: 46  MENIMIRNQTRMP-----PSTPSALSIHKDSQTISKAKPKIRIIHIFAPEIIKTDVANFR 105

Query: 61  ELVQRLTGKPEATEDGKILPPEIPPAAAFDNRKTEIVSGVGCRXXXXXXXXXXXXXXXXX 120
           ELVQRLTGKP A E G      I      + R T       C                  
Sbjct: 106 ELVQRLTGKP-AQEKGCKKKARIGRRDHQEPRITRF-----CDKPVAAAVAKKMELRTGF 165

Query: 121 XXXXXXXXXXXDVVGMWND------VVGF---EGFIQELGEFPLIPSAHQIMHGFEETQF 173
                      +  GMWND      + GF   +GFIQELGEFPL+P     MHGFEE Q 
Sbjct: 166 LAGLETRERVKEEEGMWNDENSGGFLSGFGDLDGFIQELGEFPLLPLDASHMHGFEEAQL 215

[Close]

BLAST of CsGy3G033970 vs. TrEMBL
Match: tr|A0A1Q3B7E4|A0A1Q3B7E4_CEPFO (VQ domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_07475 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.7e-21
Identity = 69/158 (43.67%), Postives = 82/158 (51.90%), Query Frame = 0


Query: 19  SARPSSMALHSASHPISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKPEATEDGKI 78
           +++PS +A+H  S  ISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKP   +  K 
Sbjct: 50  NSKPSPLAMHKDSQKISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKPPDEKGCKK 109

Query: 79  LP----PEIPPAAAFDNRKTEIVSGVGCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVV 138
            P     E P + + D     +   +  R                               
Sbjct: 110 KPRVAIREDPTSVSCDQLPVAMTKKMDIRSGFFGLETIERVKEEEEMWNGANSG------ 169

Query: 139 GMWNDVVGFEGFIQELGEFPLIPSAHQIMHGFEETQFA 173
           G  N    F+GFIQEL EFP +P     MHGFEE+Q A
Sbjct: 170 GFLNSFADFDGFIQELDEFPSLPLDANPMHGFEESQLA 201

[Close]

BLAST of CsGy3G033970 vs. TrEMBL
Match: tr|A0A2I4HRP7|A0A2I4HRP7_9ROSI (VQ motif-containing protein 25-like OS=Juglans regia OX=51240 GN=LOC109020746 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.7e-21
Identity = 77/179 (43.02%), Postives = 86/179 (48.04%), Query Frame = 0


Query: 4   ILIKKQRQRPHLLPTSARPSSMALHSASHPISKPKPKIRIIHIFAPEIIKTDVANFRELV 63
           ++ KKQ  +    P S     +A+H  S  ISKPKPKIRIIHIFAPEIIKTD ANFRELV
Sbjct: 3   VITKKQSCK----PCSTSTPDLAVHQDSKKISKPKPKIRIIHIFAPEIIKTDAANFRELV 62

Query: 64  QRLTGKPEATEDGKILPPEIPPAAAFDNRKTEIVSGVGCRXXXXXXXXXXXXXXXXXXXX 123
           QRLTGKP   + G              N K  I      R                    
Sbjct: 63  QRLTGKPSTEKGG--------------NEKPRITGREKPRTATSGEPVAKKIELRPMIRG 122

Query: 124 XXXXXXXXDVVGMWND------VVGF---EGFIQELGEFPLIP-SAHQIMHGFEETQFA 173
                   D  GMWN       + GF   EGFIQELGEFPL+P  A+  MHGF E Q A
Sbjct: 123 LESRERVKDEEGMWNGEKSGGFLGGFADLEGFIQELGEFPLLPLDANSHMHGFGEAQLA 163

The following BLAST results are available for this feature:

BLAST of CsGy3G033970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136735.1	4.5e-71	95.93	PREDICTED: VQ motif-containing protein 25-like [Cucumis sativus]	[more]
KGN59305.1	1.0e-59	95.45	hypothetical protein Csa_3G807350 [Cucumis sativus]	[more]
XP_008443061.1	7.7e-55	82.78	PREDICTED: VQ motif-containing protein 25-like [Cucumis melo]	[more]
XP_022983122.1	1.7e-46	74.72	VQ motif-containing protein 25-like [Cucurbita maxima]	[more]
XP_022935342.1	8.6e-46	72.47	VQ motif-containing protein 25-like [Cucurbita moschata]	[more]

BLAST of CsGy3G033970 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G58000.1	7.5e-20	39.49	VQ motif-containing protein	[more]
AT2G42140.1	4.3e-15	35.67	VQ motif-containing protein	[more]
AT3G60090.1	3.4e-12	70.00	VQ motif-containing protein	[more]
AT2G44340.1	5.8e-12	67.31	VQ motif-containing protein	[more]

BLAST of CsGy3G033970 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M2P8\|VQ25_ARATH	1.4e-18	39.49	VQ motif-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=VQ25 PE=3 SV=1	[more]
sp\|O48522\|VQ17_ARATH	7.7e-14	35.67	VQ motif-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=VQ17 PE=2 SV=1	[more]
sp\|O64868\|VQ18_ARATH	1.0e-10	67.31	VQ motif-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=VQ18 PE=3 SV=1	[more]

BLAST of CsGy3G033970 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LBB1\|A0A0A0LBB1_CUCSA	6.9e-60	95.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G807350 PE=4 SV=1	[more]
tr\|A0A1S3B6P9\|A0A1S3B6P9_CUCME	5.1e-55	82.78	VQ motif-containing protein 25-like OS=Cucumis melo OX=3656 GN=LOC103486769 PE=4...	[more]
tr\|A0A061EXT4\|A0A061EXT4_THECC	2.6e-22	44.20	VQ motif-containing protein, putative OS=Theobroma cacao OX=3641 GN=TCM_024904 P...	[more]
tr\|A0A1Q3B7E4\|A0A1Q3B7E4_CEPFO	1.7e-21	43.67	VQ domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_07475...	[more]
tr\|A0A2I4HRP7\|A0A2I4HRP7_9ROSI	3.7e-21	43.02	VQ motif-containing protein 25-like OS=Juglans regia OX=51240 GN=LOC109020746 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008889	VQ

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G033970.1	CsGy3G033970.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 106..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..127
None	No IPR available	PANTHER	PTHR33143	FAMILY NOT NAMED	coord: 15..170
None	No IPR available	PANTHER	PTHR33143:SF3	VQ MOTIF-CONTAINING PROTEIN 17-RELATED	coord: 15..170
IPR008889	VQ	PFAM	PF05678	VQ	coord: 46..72 e-value: 9.5E-13 score: 47.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G033970	Cla017540	Watermelon (97103) v1	cgybwmB187
CsGy3G033970	Csa3G807350	Cucumber (Chinese Long) v2	cgybcuB110
CsGy3G033970	MELO3C009629	Melon (DHL92) v3.5.1	cgybmeB184
CsGy3G033970	ClCG10G017500	Watermelon (Charleston Gray)	cgybwcgB179
CsGy3G033970	CSPI03G36510	Wild cucumber (PI 183967)	cgybcpiB111
CsGy3G033970	CmaCh14G004200	Cucurbita maxima (Rimu)	cgybcmaB306
CsGy3G033970	CmoCh14G004240	Cucurbita moschata (Rifu)	cgybcmoB279
CsGy3G033970	Lsi03G017320	Bottle gourd (USVL1VR-Ls)	cgyblsiB171
CsGy3G033970	MELO3C009629.2	Melon (DHL92) v3.6.1	cgybmedB185
CsGy3G033970	CsaV3_3G038860	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G033970	Cla97C10G200360	Watermelon (97103) v2	cgybwmbB178
CsGy3G033970	Bhi11G002125	Wax gourd	cgybwgoB213
CsGy3G033970	Carg03567	Silver-seed gourd	carcgybB0263

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G033970	Silver-seed gourd	carcgybB0167
CsGy3G033970	Cucurbita maxima (Rimu)	cgybcmaB439
CsGy3G033970	Cucurbita moschata (Rifu)	cgybcmoB410
CsGy3G033970	Cucurbita pepo (Zucchini)	cgybcpeB395