CmaCh14G004200 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh14G004200
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	VQ motif-containing protein, putative
Location	Cma_Chr14 : 1973655 .. 1974458 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCGATTATGAAGAAACGGGCTCTGTTGCAGAACTCGGCGCGCCCGGGGGCCATGGCGTTGCACACAGCTTCACACGCAATTTCCAAGCCCAAACCGAAGATTCGTATCATTCACATCTTCGCACCGGAGATTATTAAAACCGACGTCGCTAATTTCCGCGAGCTCGTTCAGAGACTGACTGGAAAGCCGGCGACGGCGGAGGAGAAGATTGTTCCGCCTCAAATTCCTCCGGCAGCAGTGGCGGATGTTGCGACGGCGTTTGATCATCGGAAGTCGGAGATGGGCGGCGGAGAGTGTCGGAGAGTGAAGACGGAAGATCGGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAAGAAGAAGAAGAGGCGTTGAGCGACGTGGTTGGGTTGTGGAACGACGTCGTTGGGTTCGAAGGGTTTATTGAAGAATTGGGTGAAATTCCACTGCTTCCTTCTGCTCACCAAATAATGCATGGTTTTGAAGAAACTCAATTTGCTTGATTTTTTTTTTTTTTTTTTTTTTTAATTTGCTAATTACTCTCCAATTTTCTGTGGTTAATTATATTACATAATTAATTACCATTTGGGTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTAATTTGCTAATTACTCTCCAATTTTCTGTGGTTAATTATATTACATAATTAATTACCATTTGGGTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTGGTGTATTAAATGGTTTGTTTGTGGGAAAATATACATTTTTCTTTTTTATTTTCACATTTTCTTTTTATAGGTTTTTAG

mRNA sequence

ATGGAGGCGATTATGAAGAAACGGGCTCTGTTGCAGAACTCGGCGCGCCCGGGGGCCATGGCGTTGCACACAGCTTCACACGCAATTTCCAAGCCCAAACCGAAGATTCGTATCATTCACATCTTCGCACCGGAGATTATTAAAACCGACGTCGCTAATTTCCGCGAGCTCGTTCAGAGACTGACTGGAAAGCCGGCGACGGCGGAGGAGAAGATTGTTCCGCCTCAAATTCCTCCGGCAGCAGTGGCGGATGTTGCGACGGCGTTTGATCATCGGAAGTCGGAGATGGGCGGCGGAGAGTGTCGGAGAGTGAAGACGGAAGATCGGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAAGAAGAAGAAGAGGCGTTGAGCGACGTGGTTGGGTTGTGGAACGACGTCGTTGGGTTCGAAGGGTTTATTGAAGAATTGGGTGAAATTCCACTGCTTCCTTCTGCTCACCAAATAATGCATGGTTTTTAG

Coding sequence (CDS)

ATGGAGGCGATTATGAAGAAACGGGCTCTGTTGCAGAACTCGGCGCGCCCGGGGGCCATGGCGTTGCACACAGCTTCACACGCAATTTCCAAGCCCAAACCGAAGATTCGTATCATTCACATCTTCGCACCGGAGATTATTAAAACCGACGTCGCTAATTTCCGCGAGCTCGTTCAGAGACTGACTGGAAAGCCGGCGACGGCGGAGGAGAAGATTGTTCCGCCTCAAATTCCTCCGGCAGCAGTGGCGGATGTTGCGACGGCGTTTGATCATCGGAAGTCGGAGATGGGCGGCGGAGAGTGTCGGAGAGTGAAGACGGAAGATCGGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAAGAAGAAGAAGAGGCGTTGAGCGACGTGGTTGGGTTGTGGAACGACGTCGTTGGGTTCGAAGGGTTTATTGAAGAATTGGGTGAAATTCCACTGCTTCCTTCTGCTCACCAAATAATGCATGGTTTTTAG

Protein sequence

MEAIMKKRALLQNSARPGAMALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKPATAEEKIVPPQIPPAAVADVATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEEEEEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGF

Homology

[Close]

BLAST of CmaCh14G004200 vs. Swiss-Prot
Match: VQ25_ARATH (VQ motif-containing protein 25 OS=Arabidopsis thaliana GN=VQ25 PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.2e-12
Identity = 61/146 (41.78%), Postives = 79/146 (54.11%), Query Frame = 1


Query: 19  AMALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKPATAEEKIVPPQIP 78
           ++A+H  S++I+K KPKIRIIHIFAPEIIKTDVANFRELVQ LTGKP         P+  
Sbjct: 15  SIAVHKQSYSITKSKPKIRIIHIFAPEIIKTDVANFRELVQSLTGKPDDQRTSKAKPRRD 74

Query: 79  PAAVADVATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEEEEEEEEALS--------- 138
              +        HR+ +        + TE   E E  ++E     EE +++         
Sbjct: 75  MHRL--------HRQVQ------DMINTEKLREPEHCDQEFCLNAEELSMTWNGNNGAGE 134

Query: 139 DVVGLWNDVVGFEGFIEELGEIPLLP 156
              G  N +  FEGFI+ELGE P LP
Sbjct: 135 SSGGFLNGLGDFEGFIQELGEFPYLP 146

[Close]

BLAST of CmaCh14G004200 vs. Swiss-Prot
Match: VQ17_ARATH (VQ motif-containing protein 17 OS=Arabidopsis thaliana GN=VQ17 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 8.3e-10
Identity = 56/150 (37.33%), Postives = 72/150 (48.00%), Query Frame = 1


Query: 20  MALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKPATAEEKIVPPQIPP 79
           +A+H  S  ++K KPKIRIIHIFAPEIIKTDVANFRE+VQ LTGK       +       
Sbjct: 17  IAMHKQSRTLTKSKPKIRIIHIFAPEIIKTDVANFREIVQNLTGKQDHHHHDL------- 76

Query: 80  AAVADVATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEE----EEEEEEEALSDVV--- 139
                      H+K        RR  + D  E  +  +        +EEEE +  +    
Sbjct: 77  ----------PHQKGLKRNPRSRR--SHDHHEVHDMNKSHGFCINSDEEEEGMVSMTWNG 136

Query: 140 -------GLWNDVVGFEGFIEELGEIPLLP 156
                  G  N +   +GFI+ELGE P LP
Sbjct: 137 NGDESSGGFLNGLGDLDGFIQELGEFPYLP 147

[Close]

BLAST of CmaCh14G004200 vs. Swiss-Prot
Match: VQ18_ARATH (VQ motif-containing protein 18 OS=Arabidopsis thaliana GN=VQ18 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.5e-07
Identity = 57/159 (35.85%), Postives = 74/159 (46.54%), Query Frame = 1


Query: 20  MALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKPATAEEK-------- 79
           ++++  S  ISK KPKIRIIHIFAPE+IKTDV NFR LVQ LTGKPA  E K        
Sbjct: 17  VSMNRNSQVISKIKPKIRIIHIFAPEVIKTDVKNFRSLVQSLTGKPAPGEAKTGKKRAKS 76

Query: 80  -IVPPQIPPAAVADVATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEEEEEEEEALSD 139
            I  PQ P   V D     DH+      G    +      + +EE    ++         
Sbjct: 77  RITTPQEP---VCD-----DHQPVNRLSGFTGLLANGGNHQVKEEWGSGDQSTSNT---- 136

Query: 140 VVGLWNDVVGFEGFIEELGE-----IPLLPSAHQIMHGF 165
                N     EG I+++GE      P+  S+   + GF
Sbjct: 137 -----NTYFDLEGLIQDVGEDYFSSFPMRSSSSSQVEGF 158

[Close]

BLAST of CmaCh14G004200 vs. TrEMBL
Match: A0A0A0LBB1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G807350 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 5.3e-40
Identity = 107/159 (67.30%), Postives = 124/159 (77.99%), Query Frame = 1


Query: 1   MEAIMKKRA-----LLQNSARPGAMALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFR 60
           MEAI+ K+      LL  SARP +MALH+ASH ISKPKPKIRIIHIFAPEIIKTDVANFR
Sbjct: 1   MEAILIKKQRQRPHLLPTSARPSSMALHSASHPISKPKPKIRIIHIFAPEIIKTDVANFR 60

Query: 61  ELVQRLTGKP-ATAEEKIVPPQIPPAAVADVATAFDHRKSE-MGGGECRRVKTEDREEEE 120
           ELVQRLTGKP AT + KI+PP+IPPAA      AFD+RK+E + G  CRR     R  ++
Sbjct: 61  ELVQRLTGKPEATEDGKILPPEIPPAA------AFDNRKTEIVSGVGCRR-----RMVKK 120

Query: 121 EEEEEEEEEEEEEALSDVVGLWNDVVGFEGFIEELGEIP 153
           E+E +EE+EEEEE L DVVG+WNDVVGFEGFI+ELGE P
Sbjct: 121 EDEYQEEDEEEEEMLEDVVGMWNDVVGFEGFIQELGEFP 148

[Close]

BLAST of CmaCh14G004200 vs. TrEMBL
Match: A0A061EXT4_THECC (VQ motif-containing protein, putative OS=Theobroma cacao GN=TCM_024904 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.8e-19
Identity = 79/183 (43.17%), Postives = 95/183 (51.91%), Query Frame = 1


Query: 1   MEAIMKKRALLQNSARPGAMALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR 60
           ME IM +       + P A+++H  S  ISK KPKIRIIHIFAPEIIKTDVANFRELVQR
Sbjct: 46  MENIMIRNQTRMPPSTPSALSIHKDSQTISKAKPKIRIIHIFAPEIIKTDVANFRELVQR 105

Query: 61  LTGKPA----------TAEEKIVPPQIPPAAVADVATAFDHRKSEMGGGECRRVKTEDRE 120
           LTGKPA                  P+I       VA A   +K E+  G    ++T +R 
Sbjct: 106 LTGKPAQEKGCKKKARIGRRDHQEPRITRFCDKPVAAAV-AKKMELRTGFLAGLETRERV 165

Query: 121 EEEEEEEEEEEEEEEEALSDVVGLWND------VVGF---EGFIEELGEIPLLPSAHQIM 165
           +EEE                  G+WND      + GF   +GFI+ELGE PLLP     M
Sbjct: 166 KEEE------------------GMWNDENSGGFLSGFGDLDGFIQELGEFPLLPLDASHM 209

[Close]

BLAST of CmaCh14G004200 vs. TrEMBL
Match: A0A0D2RRJ1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G068000 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.7e-14
Identity = 73/177 (41.24%), Postives = 96/177 (54.24%), Query Frame = 1


Query: 1   MEAIMKKRALLQNSARPGA-MALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQ 60
           ME +M +       + P   +++H  S  ISKPKPKIRIIHIFAPEIIKTDVANFRELVQ
Sbjct: 1   MENLMIRNQTRMPPSNPSPPLSIHRDSKTISKPKPKIRIIHIFAPEIIKTDVANFRELVQ 60

Query: 61  RLTGKPATAE-EKIVPPQIPPAAVADVAT-AFDHRKSEMGGGECRRVKTEDREEEEEEEE 120
           RLTGKP   +  K  P +        V+T A   +K E+  G    ++  +R  +EEE  
Sbjct: 61  RLTGKPPQEKGSKRKPRKDHSFCDKSVSTAAMASKKMEVRSGFVLGLEMRERVVKEEEGM 120

Query: 121 EEEEEEEEEALSDVVGLWNDV----VGF----EGFIEELGEIPLLP--SAHQIMHGF 165
                           LW ++     GF    +GFI++LGE PLLP  +++  MHGF
Sbjct: 121 ----------------LWGNIGDNSSGFLGDLDGFIQQLGEFPLLPLDASNDHMHGF 161

[Close]

BLAST of CmaCh14G004200 vs. TrEMBL
Match: A0A067FXP8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g044113mg PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.0e-14
Identity = 69/156 (44.23%), Postives = 81/156 (51.92%), Query Frame = 1


Query: 22  LHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKPA--------------- 81
           +H  SH ISK KPKIRIIHIFAPEIIKTDV NFRELVQRLTGKP                
Sbjct: 1   MHKNSHPISKTKPKIRIIHIFAPEIIKTDVENFRELVQRLTGKPTEHDHHHHHQKVGKKR 60

Query: 82  ----TAEEKIVPPQIPPAAVADVATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEEEE 141
               T EE+  P         D+ T     +S   G E R            E+ +EEEE
Sbjct: 61  PRNPTREEE--PRSTSVLEKPDLVTKNVELRSTFFGFETR------------EKVKEEEE 120

Query: 142 EEEEAL---SDVVGLWNDVVGFEGFIEELGEIPLLP 156
           EEE+ L   ++  G  +    F+GFI+EL E PLLP
Sbjct: 121 EEEQILWNGANSGGFLHGFADFDGFIQELDEFPLLP 142

[Close]

BLAST of CmaCh14G004200 vs. TrEMBL
Match: V4UTZ7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013474mg PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.0e-14
Identity = 75/185 (40.54%), Postives = 92/185 (49.73%), Query Frame = 1


Query: 1   MEAIMKKRALLQNSARPGAMALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR 60
           ME I+KK   + +S  P  +A+H  SH ISK KPKIRIIHIFAPEIIKTDV NFRELVQR
Sbjct: 1   MERIIKKPPYISHST-PSPLAMHKNSHPISKTKPKIRIIHIFAPEIIKTDVENFRELVQR 60

Query: 61  LTGKPATAEEKIVPPQIPPAAVADVATAFDHRKSEMGGGECRRVKTEDREEE-------- 120
           LTGKP                     T  DH       G+ +R +   REEE        
Sbjct: 61  LTGKP---------------------TEHDHHHHHQKVGK-KRPRNPTREEEPRSTSVLE 120

Query: 121 ------------------EEEEEEEEEEEEEEAL---SDVVGLWNDVVGFEGFIEELGEI 157
                             E  E+ +EEEEEE+ L   ++  G  +    F+GFI+EL E 
Sbjct: 121 KPDLVTKNVELRSTFFGFETREKVKEEEEEEQILWNGANSGGFLHGFADFDGFIQELDEF 162

[Close]

BLAST of CmaCh14G004200 vs. TAIR10
Match: AT3G58000.1 (AT3G58000.1 VQ motif-containing protein)

HSP 1 Score: 72.4 bits (176), Expect = 2.9e-13
Identity = 61/146 (41.78%), Postives = 79/146 (54.11%), Query Frame = 1


Query: 19  AMALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKPATAEEKIVPPQIP 78
           ++A+H  S++I+K KPKIRIIHIFAPEIIKTDVANFRELVQ LTGKP         P+  
Sbjct: 15  SIAVHKQSYSITKSKPKIRIIHIFAPEIIKTDVANFRELVQSLTGKPDDQRTSKAKPRRD 74

Query: 79  PAAVADVATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEEEEEEEEALS--------- 138
              +        HR+ +        + TE   E E  ++E     EE +++         
Sbjct: 75  MHRL--------HRQVQ------DMINTEKLREPEHCDQEFCLNAEELSMTWNGNNGAGE 134

Query: 139 DVVGLWNDVVGFEGFIEELGEIPLLP 156
              G  N +  FEGFI+ELGE P LP
Sbjct: 135 SSGGFLNGLGDFEGFIQELGEFPYLP 146

[Close]

BLAST of CmaCh14G004200 vs. TAIR10
Match: AT2G42140.1 (AT2G42140.1 VQ motif-containing protein)

HSP 1 Score: 65.1 bits (157), Expect = 4.7e-11
Identity = 56/150 (37.33%), Postives = 72/150 (48.00%), Query Frame = 1


Query: 20  MALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKPATAEEKIVPPQIPP 79
           +A+H  S  ++K KPKIRIIHIFAPEIIKTDVANFRE+VQ LTGK       +       
Sbjct: 17  IAMHKQSRTLTKSKPKIRIIHIFAPEIIKTDVANFREIVQNLTGKQDHHHHDL------- 76

Query: 80  AAVADVATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEE----EEEEEEEALSDVV--- 139
                      H+K        RR  + D  E  +  +        +EEEE +  +    
Sbjct: 77  ----------PHQKGLKRNPRSRR--SHDHHEVHDMNKSHGFCINSDEEEEGMVSMTWNG 136

Query: 140 -------GLWNDVVGFEGFIEELGEIPLLP 156
                  G  N +   +GFI+ELGE P LP
Sbjct: 137 NGDESSGGFLNGLGDLDGFIQELGEFPYLP 147

[Close]

BLAST of CmaCh14G004200 vs. TAIR10
Match: AT3G60090.1 (AT3G60090.1 VQ motif-containing protein)

HSP 1 Score: 63.5 bits (153), Expect = 1.4e-10
Identity = 39/77 (50.65%), Postives = 47/77 (61.04%), Query Frame = 1


Query: 26  SHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKP----ATAEEKI------VPP 85
           S  I+K KPKIRIIHIFAPEII TDV NFR LVQ LTGKP      +++KI       PP
Sbjct: 35  SQIITKIKPKIRIIHIFAPEIINTDVKNFRTLVQSLTGKPEITKTGSKKKITNTNFPAPP 94

Query: 86  QIPPAAVADVATAFDHR 93
            +P  +  +     D+R
Sbjct: 95  GLPQDSGQEHTAELDNR 111

[Close]

BLAST of CmaCh14G004200 vs. TAIR10
Match: AT2G44340.1 (AT2G44340.1 VQ motif-containing protein)

HSP 1 Score: 55.5 bits (132), Expect = 3.7e-08
Identity = 57/159 (35.85%), Postives = 74/159 (46.54%), Query Frame = 1


Query: 20  MALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKPATAEEK-------- 79
           ++++  S  ISK KPKIRIIHIFAPE+IKTDV NFR LVQ LTGKPA  E K        
Sbjct: 17  VSMNRNSQVISKIKPKIRIIHIFAPEVIKTDVKNFRSLVQSLTGKPAPGEAKTGKKRAKS 76

Query: 80  -IVPPQIPPAAVADVATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEEEEEEEEALSD 139
            I  PQ P   V D     DH+      G    +      + +EE    ++         
Sbjct: 77  RITTPQEP---VCD-----DHQPVNRLSGFTGLLANGGNHQVKEEWGSGDQSTSNT---- 136

Query: 140 VVGLWNDVVGFEGFIEELGE-----IPLLPSAHQIMHGF 165
                N     EG I+++GE      P+  S+   + GF
Sbjct: 137 -----NTYFDLEGLIQDVGEDYFSSFPMRSSSSSQVEGF 158

[Close]

BLAST of CmaCh14G004200 vs. NCBI nr
Match: gi|659084764|ref|XP_008443061.1| (PREDICTED: nucleosome assembly protein 1-like 5 [Cucumis melo])

HSP 1 Score: 198.4 bits (503), Expect = 1.0e-47
Identity = 121/179 (67.60%), Postives = 138/179 (77.09%), Query Frame = 1


Query: 1   MEAIMKKRA----LLQNSARPGAMALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRE 60
           M+AI+K +     LL  S RP  M LH+ASHAISKPKPKIRIIHIFAPEIIKTDVANFRE
Sbjct: 1   MDAILKNQRQRPHLLPTSPRPSTMPLHSASHAISKPKPKIRIIHIFAPEIIKTDVANFRE 60

Query: 61  LVQRLTGKP---ATAEEKIVPPQIPPAAVADVATAFDHRKSEMGGGECRRV---KTEDRE 120
           LVQRLTGKP    T E+KI+PPQIP AA      AFD+RK+EM    CRR+   + ED+E
Sbjct: 61  LVQRLTGKPEAITTQEDKILPPQIPAAA------AFDNRKTEMVS--CRRMVKKEDEDQE 120

Query: 121 EEEEEEEEEEE-----EEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGF 165
           E+ +EEEEEEE     EEEEE L +VVG+WNDVVGFEGFI+ELGE PL+PSAHQIMHGF
Sbjct: 121 EDYDEEEEEEEGEGEGEEEEEMLDEVVGMWNDVVGFEGFIQELGEFPLIPSAHQIMHGF 171

[Close]

BLAST of CmaCh14G004200 vs. NCBI nr
Match: gi|449437914|ref|XP_004136735.1| (PREDICTED: VQ motif-containing protein 25-like [Cucumis sativus])

HSP 1 Score: 197.6 bits (501), Expect = 1.7e-47
Identity = 118/171 (69.01%), Postives = 136/171 (79.53%), Query Frame = 1


Query: 1   MEAIMKKRA-----LLQNSARPGAMALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFR 60
           MEAI+ K+      LL  SARP +MALH+ASH ISKPKPKIRIIHIFAPEIIKTDVANFR
Sbjct: 1   MEAILIKKQRQRPHLLPTSARPSSMALHSASHPISKPKPKIRIIHIFAPEIIKTDVANFR 60

Query: 61  ELVQRLTGKP-ATAEEKIVPPQIPPAAVADVATAFDHRKSE-MGGGECRRVKTEDREEEE 120
           ELVQRLTGKP AT + KI+PP+IPPAA      AFD+RK+E + G  CRR     R  ++
Sbjct: 61  ELVQRLTGKPEATEDGKILPPEIPPAA------AFDNRKTEIVSGVGCRR-----RMVKK 120

Query: 121 EEEEEEEEEEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGF 165
           E+E +EE+EEEEE L DVVG+WNDVVGFEGFI+ELGE PL+PSAHQIMHGF
Sbjct: 121 EDEYQEEDEEEEEMLEDVVGMWNDVVGFEGFIQELGEFPLIPSAHQIMHGF 160

[Close]

BLAST of CmaCh14G004200 vs. NCBI nr
Match: gi|700204172|gb|KGN59305.1| (hypothetical protein Csa_3G807350 [Cucumis sativus])

HSP 1 Score: 172.2 bits (435), Expect = 7.7e-40
Identity = 107/159 (67.30%), Postives = 124/159 (77.99%), Query Frame = 1


Query: 1   MEAIMKKRA-----LLQNSARPGAMALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFR 60
           MEAI+ K+      LL  SARP +MALH+ASH ISKPKPKIRIIHIFAPEIIKTDVANFR
Sbjct: 1   MEAILIKKQRQRPHLLPTSARPSSMALHSASHPISKPKPKIRIIHIFAPEIIKTDVANFR 60

Query: 61  ELVQRLTGKP-ATAEEKIVPPQIPPAAVADVATAFDHRKSE-MGGGECRRVKTEDREEEE 120
           ELVQRLTGKP AT + KI+PP+IPPAA      AFD+RK+E + G  CRR     R  ++
Sbjct: 61  ELVQRLTGKPEATEDGKILPPEIPPAA------AFDNRKTEIVSGVGCRR-----RMVKK 120

Query: 121 EEEEEEEEEEEEEALSDVVGLWNDVVGFEGFIEELGEIP 153
           E+E +EE+EEEEE L DVVG+WNDVVGFEGFI+ELGE P
Sbjct: 121 EDEYQEEDEEEEEMLEDVVGMWNDVVGFEGFIQELGEFP 148

[Close]

BLAST of CmaCh14G004200 vs. NCBI nr
Match: gi|590636957|ref|XP_007028986.1| (VQ motif-containing protein, putative [Theobroma cacao])

HSP 1 Score: 104.0 bits (258), Expect = 2.6e-19
Identity = 79/183 (43.17%), Postives = 95/183 (51.91%), Query Frame = 1


Query: 1   MEAIMKKRALLQNSARPGAMALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR 60
           ME IM +       + P A+++H  S  ISK KPKIRIIHIFAPEIIKTDVANFRELVQR
Sbjct: 46  MENIMIRNQTRMPPSTPSALSIHKDSQTISKAKPKIRIIHIFAPEIIKTDVANFRELVQR 105

Query: 61  LTGKPA----------TAEEKIVPPQIPPAAVADVATAFDHRKSEMGGGECRRVKTEDRE 120
           LTGKPA                  P+I       VA A   +K E+  G    ++T +R 
Sbjct: 106 LTGKPAQEKGCKKKARIGRRDHQEPRITRFCDKPVAAAV-AKKMELRTGFLAGLETRERV 165

Query: 121 EEEEEEEEEEEEEEEEALSDVVGLWND------VVGF---EGFIEELGEIPLLPSAHQIM 165
           +EEE                  G+WND      + GF   +GFI+ELGE PLLP     M
Sbjct: 166 KEEE------------------GMWNDENSGGFLSGFGDLDGFIQELGEFPLLPLDASHM 209

[Close]

BLAST of CmaCh14G004200 vs. NCBI nr
Match: gi|1009161541|ref|XP_015898955.1| (PREDICTED: VQ motif-containing protein 25 [Ziziphus jujuba])

HSP 1 Score: 91.3 bits (225), Expect = 1.7e-15
Identity = 68/149 (45.64%), Postives = 90/149 (60.40%), Query Frame = 1


Query: 20  MALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKPAT---AEEKIVPPQ 79
           +A+H  S  ISK KPKIRIIHIFAPEIIKTDVANFRELVQRLTGKP      ++KI  P+
Sbjct: 30  LAIHKDSKTISKTKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKPTEVVHCKKKIKKPR 89

Query: 80  IPPAAVADV--ATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEEEEEEEEALSDVVGL 139
           +     + +  ++AF  +K E+  G    +  ++R +EEEEE     E         +  
Sbjct: 90  VSGREESKMISSSAFSDKKLELKSGFRAALDAKERVKEEEEEGMWISENS----GGFLDR 149

Query: 140 WNDVVGFEGFIEELGEIPLLPSAHQIMHG 164
           + D+ GF  +I+ELGE P+LP     MHG
Sbjct: 150 FADLEGF-NYIQELGEFPMLPLDTSHMHG 173

The following BLAST results are available for this feature:

BLAST of CmaCh14G004200 vs. Swiss-Prot


Match Name	E-value	Identity	Description
VQ25_ARATH	5.2e-12	41.78	VQ motif-containing protein 25 OS=Arabidopsis thaliana GN=VQ25 PE=3 SV=1	[more]
VQ17_ARATH	8.3e-10	37.33	VQ motif-containing protein 17 OS=Arabidopsis thaliana GN=VQ17 PE=2 SV=1	[more]
VQ18_ARATH	6.5e-07	35.85	VQ motif-containing protein 18 OS=Arabidopsis thaliana GN=VQ18 PE=3 SV=1	[more]

BLAST of CmaCh14G004200 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBB1_CUCSA	5.3e-40	67.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G807350 PE=4 SV=1	[more]
A0A061EXT4_THECC	1.8e-19	43.17	VQ motif-containing protein, putative OS=Theobroma cacao GN=TCM_024904 PE=4 SV=1	[more]
A0A0D2RRJ1_GOSRA	1.7e-14	41.24	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G068000 PE=4 SV=1	[more]
A0A067FXP8_CITSI	3.0e-14	44.23	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g044113mg PE=4 SV=1	[more]
V4UTZ7_9ROSI	3.0e-14	40.54	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013474mg PE=4 SV=1	[more]

BLAST of CmaCh14G004200 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G58000.1	2.9e-13	41.78	VQ motif-containing protein	[more]
AT2G42140.1	4.7e-11	37.33	VQ motif-containing protein	[more]
AT3G60090.1	1.4e-10	50.65	VQ motif-containing protein	[more]
AT2G44340.1	3.7e-08	35.85	VQ motif-containing protein	[more]

BLAST of CmaCh14G004200 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659084764\|ref\|XP_008443061.1\|	1.0e-47	67.60	PREDICTED: nucleosome assembly protein 1-like 5 [Cucumis melo]	[more]
gi\|449437914\|ref\|XP_004136735.1\|	1.7e-47	69.01	PREDICTED: VQ motif-containing protein 25-like [Cucumis sativus]	[more]
gi\|700204172\|gb\|KGN59305.1\|	7.7e-40	67.30	hypothetical protein Csa_3G807350 [Cucumis sativus]	[more]
gi\|590636957\|ref\|XP_007028986.1\|	2.6e-19	43.17	VQ motif-containing protein, putative [Theobroma cacao]	[more]
gi\|1009161541\|ref\|XP_015898955.1\|	1.7e-15	45.64	PREDICTED: VQ motif-containing protein 25 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008889	VQ

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G004200.1	CmaCh14G004200.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 41..67 score: 4.6
None	No IPR available	unknown	Coil	Coil	coord: 101..131 scor
None	No IPR available	PANTHER	PTHR33143	FAMILY NOT NAMED	coord: 20..155 score: 5.6
None	No IPR available	PANTHER	PTHR33143:SF12	SUBFAMILY NOT NAMED	coord: 20..155 score: 5.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh14G004200	Cucsa.242710	Cucumber (Gy14) v1	cgycmaB0674
CmaCh14G004200	Cla017540	Watermelon (97103) v1	cmawmB228
CmaCh14G004200	Csa3G807350	Cucumber (Chinese Long) v2	cmacuB239
CmaCh14G004200	MELO3C009629	Melon (DHL92) v3.5.1	cmameB229
CmaCh14G004200	ClCG10G017500	Watermelon (Charleston Gray)	cmawcgB222
CmaCh14G004200	CSPI03G36510	Wild cucumber (PI 183967)	cmacpiB241
CmaCh14G004200	CmoCh14G004240	Cucurbita moschata (Rifu)	cmacmoB244
CmaCh14G004200	Lsi03G017320	Bottle gourd (USVL1VR-Ls)	cmalsiB242
CmaCh14G004200	MELO3C009629.2	Melon (DHL92) v3.6.1	cmamedB260
CmaCh14G004200	CsaV3_3G038860	Cucumber (Chinese Long) v3	cmacucB0279
CmaCh14G004200	Cla97C10G200360	Watermelon (97103) v2	cmawmbB249
CmaCh14G004200	Bhi11G002125	Wax gourd	cmawgoB0292
CmaCh14G004200	CsGy3G033970	Cucumber (Gy14) v2	cgybcmaB306
CmaCh14G004200	Carg03567	Silver-seed gourd	carcmaB0343

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh14G004200	Wax gourd	cmawgoB0359
CmaCh14G004200	Cucurbita maxima (Rimu)	cmacmaB247
CmaCh14G004200	Cucurbita maxima (Rimu)	cmacmaB286
CmaCh14G004200	Cucurbita moschata (Rifu)	cmacmoB272
CmaCh14G004200	Cucurbita pepo (Zucchini)	cmacpeB283
CmaCh14G004200	Cucurbita pepo (Zucchini)	cmacpeB294
CmaCh14G004200	Cucumber (Gy14) v2	cgybcmaB916
CmaCh14G004200	Melon (DHL92) v3.6.1	cmamedB252
CmaCh14G004200	Silver-seed gourd	carcmaB0202