CsGy3G020970 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G020970
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	double-stranded RNA-binding protein 4-like isoform X3
Location	Chr3 : 18715783 .. 18728291 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATCGAAATTGATCAAAACCATGAGAGGAATCCATTTCAGAAAGTTTTAAATTAAAAATTTCCAGAAGTACTTTTTAAATGTTAAATTGTCCTTATAATTTAACCCTTCAACGTCATTAATATCTCGTCGTCAGGATTAAGAAACCCTGATCATCCTTTCACAGTGAAGAGAGCGAAAATCACCCGACATTCGTTCATTCATTCATAGCCACTGACTGATCGTTCCCATTTCACCAATTTGTTCTCCTCCAATTCCATTACCCTCGATAATAATCGACGATTATGGAAGAATCCGGTACAGTTGAAGCAGGTGCACCGCAACAATCTCCATTCCCGTCCGACTCAGTTCCAACTGTTGTTACCCCTCCTATTCCGGTAGAAAACTCCAATACTTTTCAGCCTCAACCAGATATTCATCCTCCATCTGTTTTACCGGACTTAGTTCCGATTCCAAGTGCGGCTCCAGCTCCGATTCCGTCTCCTAATCTCTCTGATCATACTCGTAAGTGTATGACAATGTTGCCCATCGTTCCGTTGAGGATGCATTTTTTGTTCTTGGTGTTTGGTTATAATTGTTTAGTGTTTTCGTTTCAGCAAATATCTGCCATATTAGATGGATTTCCTCTACATTTCGTGTACTTAAGTTCCCCATCTGTTTTTGTTTTCTGTTAGAGAGAGAAGCAATTGCGAGCCATTTGTGTGTGTTGAAAGAATTATCTTGTTCTCCGTATGTGTCTATGAGGTCCTGAGAATTCAATTATAAGTTGCTATTTCTTACTTCCGTTTCCATCTTCTTTCCACAAATTTTGGATGGTCGGTTGTTTTGGAAGTTAGAATACTGGTAGTTCTGTGGCGATGATCTAGATATTCCTTCCTTGTTCGGTTTTTAAAACAAAAATAATTTGGAGAATTCTCTTGAAGAAAATTTCTACGGGGTTTACTTCTAGCCTATCTTCTTAACCACAATGAGTTGGCTTGGTGGTAAAAAAGGAGTATGAGTATATCTAGAGCTCGTGGGTTCAAACCTACCTAGAAATTAATTTACTACGAGTTGGACGGATTGTTTAGTAGATTAGTTTGCCCACACTCACATATATAAAAAAAACTCTAGCCTATCATCTTGCCCTCGATCCTTAGTGGCATGTTCTTCGCAAGAATAGTGAGACTATTTATTCACCTTCACCTCATAAGGCTGCTTTTCCTACATTCTGCTGTGTGCCTTTTGGAAGATGGAGAAACTAAAGATTAGACGCTTCAGGCATTGGTGGATTTGACTCATAATGAGGATGCTATCTTTGCAGACCAGTTTCTGGACAATTCTTTGGTGGATTTGATGTTATTTCTTTTTTATCTCGTGAGTTTTCTTTCTCTATGATTAAAGATGTAGGATCCTTTTCTGATAGTTTCTTTTGCCAGGTTTGCATGTTGGTTAGGCACTCAAGGCTATGTTTTTGTATGGTCTTTTTGTTCTTCCATTTCCCTCAATGACCATAACAGAAATGAAAGGAAAAAAGAATAAATTGTTAACTGAAGAGGACGGTTATGCATTGGGTACTTATAATCTGACATTGCAAATTGAGGAACTTGTAATTTTCTACAGTCGTTCGTACACGTGGACTCTTCTAATGTTCCTCCTTTCACTTTTGGGCTTCAATTTGTTTATGAGTATTATTCAATGCATCCATCTTTATGCATCACACGAATAGAGAGAATTAAAATATTTCAAAAACGATGTTAGAAGAATTTGGTGGGGTGTACATAGATACCTGTTTTCCCAGATGCACATGAGTATTTTTTTTATTCATATTTTATTCTAGTTGTGTAATACAAGACAAAGGTCCCCTCAGTTTTATTGTGCACGAATTTGTTATTTGGTGGATTTTTGTTCTTTATAAGAATGGAAGAGAAATCAATGTTATGGTTTTGCAGAAATCTTCGTGTACAAAAATCATTTGCACGAGTACACTCAAAAGGCAAAGATTGCAGTACCAGTATACCAGACTATTGATGAAGGGTCCCCAAGTCTGCCTAAATACAGGTCAACTGTGATGGTTGATGAGGTACATTATGTGTCTCCTAATACCTTCCGTAATCGAAGGGCGGCTGAGCAAGATGCTGCGAGAGTTGCCTTTGAGTACATATCAAAAAAGACAAAGGATGATGCCTTTCTTCTTCTACGTGAGGTACGAGTTATACAGTGATATTGAAACTTGATTTGTTGCCTTTAATTTTTAGTATGCGTATAACTGTACTTGATTATTTATTTATTTCATTTTTTAAAATTCTAGTACAACATATGTGGTGGAAACTGTAGATTTAAATTTTCTGACCTTAATGGAAGGAATAGATGCCTTCACCACTATATTATGCTCACGTGGTCATAATTTTGCTTGCTTAGTTGATTTTAAACGCAATTCTACGATGAGATTTCCTATATGGATTTGTGGTTTGTTACAAATAAGATTTTCTGCATGGAAAATACTTTTGTTGTAATTTTCTTTCATAATGTGTATAATAACGTATTTGAAGCAAACAGAAGCATTGATAGTTGCATTGCATTTAATCACTTAAGTTGGGTAAGATTTCTCATAGTCGTAGTCATAGTCAAAGACCTCAAAAGTTGGAATTTATGTAATTGATTTTAGTGATAAGGCATTCAGTTTGCCTGAATTAGAAGTTTGGAAATTATGCCCTCGGGAATTTGGTCGTTAGAAACTGAATGCTTTTGTTTGTACTTCATGGTGAATAGGGATAGGATTCAAATGTATAAGAATGAAAGATAGTTTAGTTTTATTTATGTTATAAGAAACATGTGAGCTTTCATTGAGAATTATGATAGAGCATACAAATAAATAGCCTCAACAGGAAGGCAAGAACTACAAGGTTTCAAATCCAAAAGAATAAGGCCCTAACCAAGGTATCATGTAATGTCCTCCCACAACTCCTCGGCGTAGCACTCCCTCTTAAAGTTCTATTATTTCTTTCAAGCTACATATCACAAACAATTGAAAAAGGAAAATAAAAATGAAAAACGTACTAGATAAACATGAGATTCCATCTCAAAACCAACCAACAACAAGAGGAGTAACTCCCTCCATAGCGCCAAGGATCTTAAAAGAATATTTCTTAATCTCTCTCGATGTTGCTCCTTCCTACCCTTTCTCCTTGTCTTACTAGACCCTTTCTCTACCAACACAACCATGAGACCTCTCTGATCACCACATATGACGATGCGTACTCACAGCCCCAGATAATTGAGAGAAAAGTTTATTATGGCAGTAGATTTTATGTATAGAGGCTCACATATTTTTTTAAGAGGAAACAAGTTCCGTTTATTAATAAATTAATAATATAGAGACAGAAGCTCATAGTACAAGAGGATTACAATGAGTGAAAAGAGAGAGAGATCAATTGACGCACCCCGACATCTCAAGTAGGCAGTTTTTTTGACAGAGGTTGACATGTTAAAATACCTAAAGCTACAAGAAAAATTCTTTTAGAAATTTACTGTGGGTTATTATTGTATTTATTTATTTACTTTCTTATGAAATGAACAACTTTTATTGAGAATAAATGAAAGAATACGAGGACATAAAAAGATAAAAAACCAAACTCACAAAAAGGAAACTCACCTAGAGAAATTGGCTTAAGTTATCTGAAATGGTACTTATAGAATAATTATAAAAGATCCTCAAAATTGGAGCAAATACAGAAACATGAAAAGTACCAAGAGAACAAACATCATTAGACGTCCCTCTCCAATCCTGAAAAAGCTTTGTTATTTTGTTTGCCCGAGAGATCCCATAATATAGTGCACACTGCAAAAAAACCATGAGAACCAACTTTTCTTCCAAAGGACGAATGGTAGAGGAACTTCTTAACTATATCACTGGTGTCTGTGTCGAGCAAGTGAGAGACCAAATGCTGGGAGAAAAACGAAGAGTCAATGAGATTGCTAAGCTAGCATGAAGAAGGAAAATGGTTGTTATGGTTCGATAAGAAGTGGAGAGACCAGTTTCCCTGAGAGGGTTAGACGTTAGTAATGTAAGAATTCACAATAAAGTTTTGTTGGTCAAATGGCTTTGATGTTTTCCCTTGAGTCCAACTCTCTACAATATATATTAATTATAGATGGGTTTATGTGGAAGAAGTCTTTGTTAATGGGGTCATTTTGTTGTATTATTTGTCGAAAGGCGGTGAAAGACCCGAATCACATTCTTTAGAGTTGTCAATGTGGAATTGCTTCTTTTAGGTGTTTGATTTCAAGCTTGCTCATCGGGTAGATGTTTGGGAGACGATCAGGGAGTTCCTTCTCCATTCACCTTTTAGAGAGAGACCAATTTCTTTGGTTAGTTGAGTTATATGCTATTTTGTGGGATATTGAGGGGGTAACAAGATGCTTAGGGGTATGGAGAAGACCTTGGTGTTGGAATTTATGTCCTAAAACTCGTAGTTCGTAGTTGAAAATCATATTCTATTAAATAGAGTTGTTGAGGAATTATTAGTGAAACTGATAGTACAAGCAATGTGATTCTGAATCGTTCATGTACATGAAAGTGGAGACATCCTATGTAAAAAATTTACATAAAACTAAATTATGAAATGGTCAGTTTTACGTAATAACATCGTTTACTATATAAAACTGACTATTTTGATTATTGATGACTTAGGTAACTTAATTTTAATCTTGAGCTAACTATGAATTACTGTTCACACGGGATTATCCTTAGATTTGCATAGGTGAAGGCAGCACATCAGTGTTGGCCCAATAAGCCTTCCATTTCACGGTAAGTCCAAGTGGATAACTGGAAACATAGGATGCAAGATGGAATTCCTTTTTGACTAACTTTAGAGTTAGTAGATATGTTGTTCTCTTATGCACTGAATCTAGGTCTTGAACAAGGGGCCTCACCCTCTAATTGGTCCAAGAGGGATTCAATTTATTGGTTGGACCTTAAACCGATTGTTTATTAAAGAATTAATGGGACTTGAGGAATAAGATTTAATATTGGGGGTAAAACAATATTTTGACCCAGTCGGGATTACGAACAACCTGTGAAGGACTAACTTACCGATCATAGTTTTATATTAAACGGATACAAATATATCTATAATGAGGGGAGTGCAACTGTGAGACTTTAGTGGAATGATCTGTTAGTTAACGAATGTTGATTAGCTCGGTCTAAAAGAGTTTAGCCAGTTAACCTCGAATCGTGGAGCCCATAATCTATAGGTCCATTAGGTTCTTCTGCTAGCTCATATGAAATTAAGTAATTAACTTAGAACAGTATGATGAATGATTCGAATTGTTCGAACTAGGTAATGAAAAAGAAACTGACAAGTATATTTGATATAGCTGTTGGTTATTAGTTTAGAGATGTAGTTTTTATGTTTAAATATGATTTAAATATATAAAATAATACAGATTCATATTTGGAAGCTCTAAAATTATGGAAATGGTCAAAACTGTAAAAGTCAACCACTTTTGACTTTGAAAAGTCAAATTTTGACCGACAATTCATTCAAATGTGATTTGAATTTCGAGAAAATGAATGTGGATTCATGCTCGAGAGGTCGGAATCAGTTAAAACAAACAAAATGGTAAAAAGTCAAAATATTGACTTTTTTTGTCAAAGTTTGACTTTGACTAATTTTAGGATAAGACCATTTTGCTCTTAGTGGGAAAATCCAACCAATTTGTTGAAGGTTAGTGGGCTAGGTGTTGCCTTATTGTGAAGACAAAAAGCTCACTAAATGTTGGTGGGTTATGTGTTGTTGTGTTTTGGTGAAGCACAAATATGCATATTACATGGTTTTTTCTTATAATTTGTGTTTTCAAAATGATTTTGGGGTTGGCCCTTTTGGTTACTCTCTCAAGTGGGTTGGATTTATCCACTCACTTATTGTTTGTATAATAATTTTTCTTCACCAAGATATCTCTGAACCCTAAGCCCAATTCCTCAACTTCCATCTCTTTCTCTGTCTTGGTTCCTTCATCCATCGGGTCCCAGAATCCAATTTGGAGCCGGGAGAATAGTAGGTCAACTCTAATGGTGGAGAATAGTAGGTCAACTCTAATGGTGGACTGGTTGATGTTTGAATGGAGAATTGAGCAATTACAGAGCTACGAAGGTGAGATTTAACTTAACCCTAATTTCTGTTTAATTTAGGCAATTTAGATGTTAATTTAGTGCAATTAGATTTAGAGTAAAATTGATCCAGTTTATGATGCGCATGTCTTATGTATCCATCACCTGGTGATATTTGGTTCTTGGTAGGGATGCAATCAGTTCGACTTGGCTTGGTTTGAGTCTCGAACCGAAACCGAACTGCCATATATTACTATGGAAATGGGAAAATCGCACCGAACTGCCTATGAATACTAATCGAACCGATGAGAACCAGTTTCTTTGGTTTGCTTTTTGGTTCTCATTAGTAATGGACTGGTTTTGTCCCTCCAAGTGAGGGCCGACGAGCCCATTTCGTATTATTGGATCAGGCCCAAAGCAAGTCAAGGAAATTTGTGGAACTCGCGTGTAAGCATATTAAAAAATAAAAGATTTGTGTTCACCCAGACTCGAGCATGCACACAAGAGCATTTAATTGAATGGCACTGCTACTAGAGATGCGTCTCTTCATTGGTTAAAATATTGGTTTTTTAATATAATTATAGTTTTGGTCAGCTCGGTTATGGTTTATTTGGTCAACCAAAATTTTGATCAGTTTTTGAACTTTAAAACTTGAACCTTTGAACCAAACTGTTAGTAAATCGAGCTGACATCAGTTTTGGTCGGTTTTTATTGATTTTCAATTTGTCCTTGCACTCTAGTTCTTGGTGAGGTTCCATGTTTCTCTTTGGGCTTGTTCTCACAGACTTATTTGTAAGTATCCTCTAAGTAGCATTTTACATGGAAACTCTTTCTCTAGAGGGGCTTTGTCGACTTGCTTTTATTGTTGCTCTTGTGTTCTTTAATTTTTTTTCTCAATGAAAGCAATTTTTAGATCAAAAAATATATATTTTATTGAGTACAGCTCACTTGTAATGTCTTATTGTTGCCTCTTGCGTAAAGGCGATTATGAAACTTGTCACCTTAAGGTGTGCCCTTTGTTAATTGATTCTTGTTATTAATTGTCATTAATCTGGCAGGACTGATTACTTTGTTATCAAGTTGTTAAGGTTAGTTATATGCTTCAAATTTATCTTCCATCGCTCCAAATTTGACCCAAAAGCTCATCCAGCATATTTGTTAGGTATCCTCCTGGAATAAAGGGATATAAGCTCTATGATATGACTAAGAATTCTTTCTTTGTATCCAAAAATGTCCTATTCTTTGAAGACTTATTTCCCTTCCACAACCTTGGAGACACTACACCAGTCATGATTTCCTGGATGAGTTTGTGCTTCCATGTCCGCTGTTTGTTATTCCTGAAGCTATCTCAAGCACCACACCTCAACATAATAATGTCTCAGAATAATGCAACTACTTCTACTGATGGTGTTGATACAAACTGTTACGAGGAGCAGAACACAGAACTGAATGACAATGAAATACTGAATGATGCTGCAATAGAACATACTGACAATGTTGTTATAACTGAAGTTGCAAATGAAGCCGACCGTAGTAGAAGCTGTGAGCCTACTGCAAATGATAGCAGCCGTGAACCTGCACCTGTCACACTCCATAGATCATCTCGGCAGTTATGTCTACCTTCATATCTTAGGGATTTCCATCGCAACATGATTGGGAAGAAACATGTCACTTCAACAGCCCCCTATTTCTTTGGCAAATATCTTTCTTATGAATCTTATTCACCTAGACATAAACACTATTTGCTTAATGTGACTGTTTATGAACCTACCTTCTGTCACCCAGCTGTAAAGTTTCAGAATTGGAGAGATGATATGGTGAAGAAATAAATGCAATGGAACGTAACAAGACTTGGATAGTGACTTCATCGCCCAAAAGTCAACACATACTAGGAAGCAAATGGGTGTATAAAGTCAAATATCTTCCCGGTGGAACTGTTGATCGGTACAAGGTGCGCCTTATTGCTTAAGGCTATTATCAACAAGAAGGCATGGACTTTTTTGACACATTTCCTTCCGTGGCCTTTGTCACAGTAAAGGTATTTCTATCCTTAGTGACCTCCTTTAATTGGCAATTTATTCAAATGGATATTACCAATGCCTTTTTAAATGGAGACTTATTTGAAGAGATTTATATGTTCTTACCCATGAGATACAAGACAACTATAATACCAAATAAGGGGGAGAAGCTCGTTTGTCGATTGAATAAGTCAATATATGGCTTCAAACAAGCCTTTAAACAATGGTTTGTGAAGTTTTCTTCTGTATTGTCTACACATGGCTTCATCCAGTCAAAGTCCGACTAGGCTATATTCGTGGAAGTGGTGAAACCTTTGTTGCATTGTTAGTATAGATGGATAACATATTACCAATTGGACCTTCCCCGGATGAGATCAATGTTATCAAAAAAGATCCTCAAAAGCCATTTTAAAGTTAAGGACTTGGGACAAACCAAATATTTCCTAGGATTAGAGTTATCTCGATCCAAACAAGGTTTGTTTCTATCACAATGAAAATATTCCCTTCAAATCCTTGAAGACACTGAATACCTTGCTGCGAAGCTTGCTTCATTACCTATGGATCCAAACATCAAGCTCTCAAAAGCCAACTAATACTCATCTGAATGCTGCTCATCACTTGTTGAAATATTTAAAACGCCAGGGCAAGGCATTTTGATTAAGCCAACTCACTAGTTTCATCTCAAGGCTTATGTTGACACTGATTGGGGGGCATGCCTTGACACTCGACAATCCATTTCAGGCTATTGTATTTTCTTAGGGAACTCATTAGTCTCATGGAAATCGAAGAAGCAAGTCACTGTTTCGAGATCATTTGCAGAGGCAGAATATATAGAGCCTTGGCATCTGTAATAAGTGAACTTATATGGATTTCTCAACTTCTAATTGATCTACACGTTCAACATATGTTACCAACAACTGTGTTTTGTGACAACCAAGCTGCCGTTGCTATTGCATCCCATCCAATCCTACCTTCCATGATCAGACGAAGCACATAAAAATCGATTGCCACTTTGTAAGAGACAAGATCATTGATGGCTTCTTGAAAGTATTGTCAATTCGATTACCCTTACAACTAGCTGACATGTTTACCGAGTCATTATCGGCTGTTTTGTCAAAACTTTTTGTCAAGTTGGGTGTCCTTGATGTCCATTTCCAACTGAGGAGTATTAAAATGATGCCTTGTAAATAATTGATTCTTGTTATTAATTGTCGTTAATCTTGTAGGATTGGTTTCTTTGTTATCAAGTGATTTTTTTTTTGAAAAGGATACGAGTCTCAATATTATTAGTATAAATAAAGAGACAAAGCTCAATGTACATGAGGGTTATACAAAGAGCAATAGGGGAAGGAGGATTAGCAGGCACATCCGAGCATCTCAAGTAGGTTGACACCCCCTTAGCGCCCTTAACACATCCAAAAAGCGACAATACAAGATCAAACAAAAAACCACAAATACAAAGCCAAAAAAAAATGATAAAAAGAATCTGTCCAAAGCAAAATCATAAATAAAAGGCAGCATGCTGAGAACAAAGAAGAATAAGCCTTGATTGATTGAACAAAAAGCTGTTTGAAGCATGGGGCTGATCAGGAAGTCCTGATGATCAAGGACTTCAAAGTGGGGAGGCTGTGAAGGCTGGCCAATATAACACAATATCCTACGTCAAAGTTCTTTTTCATTACTTTTTCTAAAAATTCTCAATCTACTCTGTCAAAGGCCATTTCAAGGTCTAATTTAGTGATCCATCCTTTCTTTTTTCGGATTCTATAGTCCTCCACAGCTTCGTTTGCTATTAAAATAGGGTCCAAGATTTGACGCCCTTCCAGAAGGCCACATTATGATGGAGCAATAATACTTGGCATTACTTTCTTTAATCTTTCTGCAAGAACCTTTGCAAACAACTTTTAAATTAATGTTGAAACTGATCCAGCAGAGAACGTGAAACTGACCTTCCTTCTCTTGACCATGAATGAGAAGTAACTCCATTAAGAAATAACCCCAATATTCAATGTTTATTACCCTTGCACTTTGAAAACGTTGTTAAGTACTTGCACTTTACCAATAATGAGGTCAAATATTGACATGTTGAAAAAAAACGCATGTATTTGGATGTTGAAGTACTTTTTAATTTTATTGGTTTCATATCTCTATACAAACTAACTTCATATCTCATATACAAACTATGTCCCCTGTTCTTTCTTCAGGATTTGATGTTATGCAAGTCCATTTTGTCTGAATATACTGACAAAATGGGTTTGGAAAGACCTATATACACAACTAAACACAATCAAGGCTCGGTTGCATTCTTCCAATCCACCTTGGTTTTTGATGGTGTGGTTTATACTAGTGATCTTGGTAGGACTAAGAAAGAGGCAGAGCAATTGGCAGCACGTGCAGCTATTCTTTCACTTCATGGTATTTGATTGTTGTAAACTAGTACTAAATTATTTCAAAATATTTGGTGCCTTGAATAAGATTATTATTTTTTTTTTAAAAAATAACAATGAGGATAACAATTATTATTATTTTGTAGAAGATGCAACGAATCCTAAATCACAAAAAGCTCTTGGGGACATCATTGCATCTAAAGTCAGATTCCATGCAATGTTGCAAAAGGTTAAAGATTCAAATTTTTCTCAATTTCAACCGAAATCCATGCCTGAAAATACAGTGGAACGTGTTGCAATGACAGTTAATGAAGGTAAAGAACTTAAAGATGCTGTTTTAGACGGTGGAGTGGTATGTGGTGCAATTTCAGAGGCTTGTCCAACTTCTCAATTTCAACCTGAATTTAGTGCAACAAAACCGGATGGATCATCCCCTCTAATGAGACTGCCAATAGAATTTGTGCGTTCAACTTTAGAGGAGCCTGTTGGCTATCACGCAACAATTGGGTCTAAAAGGAAATCTAAGAACAAGAGAAAGGCACGTAAGAAACTGTGTATGGAGAACCGGTAATTTTCTTTTCATGAAACTTCATCCAACGTCGTTGTAGTTATAAATGTCGATAATTTACAGTTTATAACTCCACTGCACATTTATTTTATGGTTTTTAGGGTATTATATAGTTGTTTACAGTAAACACCAGTCCTGTTACAACTAGAGCTATTCAATTTGCATGTTCATGGAGTTAAGAAAATCAATCTAAATTTCTGTGGTAAGACTACTACGCTGCAATTTATTTCAATGAAAAAGTGAAGTGATTGATATCCTTTCAAGGTAAGGTGTGGATTCAAATCATGATGGTAGTCATCTAAGATACTAAAATATCTTACAACTTTCTTAATACTCAATGTAGTACCGAGTAAGATTTGATAGTTGTGCCTATGATTAATATAGATTTATTTAACTTATTCTGGTGCCCACAGTTGTTAAAAATGCACAAAAACTGGGGGGCCTTTGTTTTGTCTACAATATGATGGTATCATATGGATTGTAAATGAATTCAAATGAGTGATTAGTTGGAGGGAAGTTACTCTTGTTTTATTGGGCTATATGATAGGAGAGATGGCATGTCCCCTCAAGAGTTCTGCTATTTCTATGTTCTACTTGAATTATATTAATTTAGGCTCCATATGTGTAAGTTATTTCGATCGTATAACTAAATCTCCTTTTGTTAAAAATGACCAGGGTGGCTACCGAAACAAGTCAAACTGCTGCTCCTTGCTCCGTAGCTCGATGACTGTGAAGTGACCTGTACTATAAGTACTCATCTGCCTCAAAGGTAACATTTTAGAGTAGTTTTTGGGCATAAATACCATGAATACAAGATCACATTTTAGTAGTAGATCCAGGTTAATAAGTTGGTCTCGTCATTCATATAATTCTCTGAGACTGACTGTGCGAGTATCCAACCGTCAGTTCATATGTTAATACTAAAGGTAGCTTTGTAGGTTGTCCTTGGATAATCATACTATTAACATTAAGCTTTCTCCTCGCTGTTTCTTTTTTAATATGATGCTTCAAATTCATTGCTTTAATATTTGTCAATGCAGGGGTTCGAAATGATATCACATTGGGCTTTTTGGTCTTTTTGGTGGGAGAAGTGATTTTGGCATTAGAAGAGTTTGCAATTGCTTTGGGAAAGTCAAATGATAGGTCCACTAGAAGAAAGGTTGTTGTAATTGCTTTCACAAAAACTAAGCATGTTTCTGGTGCAGCTCTAGGTCTAGAAGTCTGTTTTTATTAGATTTGGGAAGCTTTAGAAGCGAAGCCAAGAAATGTTGGTTTGGGAAAGATTTTGTTGTAGTCTAGTAATGGTTGGATTTTAGGTTATCTTAAACTTTTGTTGACGGTTTGGTCTATTTCGTTTTTGAAAATTTTATAAACATTCCTTCTCCATTTAATTTTCTTTATTTTTCTTATCTACTTTTTTATACTAATATTTTTAAGAACCAA

mRNA sequence

ATGAAATCGAAATTGATCAAAACCATGAGAGGAATCCATTTCAGAAAGTTTTAAATTAAAAATTTCCAGAAGTACTTTTTAAATGTTAAATTGTCCTTATAATTTAACCCTTCAACGTCATTAATATCTCGTCGTCAGGATTAAGAAACCCTGATCATCCTTTCACAGTGAAGAGAGCGAAAATCACCCGACATTCGTTCATTCATTCATAGCCACTGACTGATCGTTCCCATTTCACCAATTTGTTCTCCTCCAATTCCATTACCCTCGATAATAATCGACGATTATGGAAGAATCCGGTACAGTTGAAGCAGGTGCACCGCAACAATCTCCATTCCCGTCCGACTCAGTTCCAACTGTTGTTACCCCTCCTATTCCGGTAGAAAACTCCAATACTTTTCAGCCTCAACCAGATATTCATCCTCCATCTGTTTTACCGGACTTAGTTCCGATTCCAAGTGCGGCTCCAGCTCCGATTCCGTCTCCTAATCTCTCTGATCATACTCAAATCTTCGTGTACAAAAATCATTTGCACGAGTACACTCAAAAGGCAAAGATTGCAGTACCAGTATACCAGACTATTGATGAAGGGTCCCCAAGTCTGCCTAAATACAGGTCAACTGTGATGGTTGATGAGGTACATTATGTGTCTCCTAATACCTTCCGTAATCGAAGGGCGGCTGAGCAAGATGCTGCGAGAGTTGCCTTTGAGTACATATCAAAAAAGACAAAGGATGATGCCTTTCTTCTTCTACGTGAGGATTTGATGTTATGCAAGTCCATTTTGTCTGAATATACTGACAAAATGGGTTTGGAAAGACCTATATACACAACTAAACACAATCAAGGCTCGGTTGCATTCTTCCAATCCACCTTGGTTTTTGATGGTGTGGTTTATACTAGTGATCTTGGTAGGACTAAGAAAGAGGCAGAGCAATTGGCAGCACGTGCAGCTATTCTTTCACTTCATGAAGATGCAACGAATCCTAAATCACAAAAAGCTCTTGGGGACATCATTGCATCTAAAGTCAGATTCCATGCAATGTTGCAAAAGGTTAAAGATTCAAATTTTTCTCAATTTCAACCGAAATCCATGCCTGAAAATACAGTGGAACGTGTTGCAATGACAGTTAATGAAGGTAAAGAACTTAAAGATGCTGTTTTAGACGGTGGAGTGGTATGTGGTGCAATTTCAGAGGCTTGTCCAACTTCTCAATTTCAACCTGAATTTAGTGCAACAAAACCGGATGGATCATCCCCTCTAATGAGACTGCCAATAGAATTTGTGCGTTCAACTTTAGAGGAGCCTGTTGGCTATCACGCAACAATTGGGTCTAAAAGGAAATCTAAGAACAAGAGAAAGGCACGGGTTCGAAATGATATCACATTGGGCTTTTTGGTCTTTTTGGTGGGAGAAGTGATTTTGGCATTAGAAGAGTTTGCAATTGCTTTGGGAAAGTCAAATGATAGGTCCACTAGAAGAAAGGTTGTTGTAATTGCTTTCACAAAAACTAAGCATGTTTCTGGTGCAGCTCTAGGTCTAGAAGTCTGTTTTTATTAGATTTGGGAAGCTTTAGAAGCGAAGCCAAGAAATGTTGGTTTGGGAAAGATTTTGTTGTAGTCTAGTAATGGTTGGATTTTAGGTTATCTTAAACTTTTGTTGACGGTTTGGTCTATTTCGTTTTTGAAAATTTTATAAACATTCCTTCTCCATTTAATTTTCTTTATTTTTCTTATCTACTTTTTTATACTAATATTTTTAAGAACCAA

Coding sequence (CDS)

ATGGAAGAATCCGGTACAGTTGAAGCAGGTGCACCGCAACAATCTCCATTCCCGTCCGACTCAGTTCCAACTGTTGTTACCCCTCCTATTCCGGTAGAAAACTCCAATACTTTTCAGCCTCAACCAGATATTCATCCTCCATCTGTTTTACCGGACTTAGTTCCGATTCCAAGTGCGGCTCCAGCTCCGATTCCGTCTCCTAATCTCTCTGATCATACTCAAATCTTCGTGTACAAAAATCATTTGCACGAGTACACTCAAAAGGCAAAGATTGCAGTACCAGTATACCAGACTATTGATGAAGGGTCCCCAAGTCTGCCTAAATACAGGTCAACTGTGATGGTTGATGAGGTACATTATGTGTCTCCTAATACCTTCCGTAATCGAAGGGCGGCTGAGCAAGATGCTGCGAGAGTTGCCTTTGAGTACATATCAAAAAAGACAAAGGATGATGCCTTTCTTCTTCTACGTGAGGATTTGATGTTATGCAAGTCCATTTTGTCTGAATATACTGACAAAATGGGTTTGGAAAGACCTATATACACAACTAAACACAATCAAGGCTCGGTTGCATTCTTCCAATCCACCTTGGTTTTTGATGGTGTGGTTTATACTAGTGATCTTGGTAGGACTAAGAAAGAGGCAGAGCAATTGGCAGCACGTGCAGCTATTCTTTCACTTCATGAAGATGCAACGAATCCTAAATCACAAAAAGCTCTTGGGGACATCATTGCATCTAAAGTCAGATTCCATGCAATGTTGCAAAAGGTTAAAGATTCAAATTTTTCTCAATTTCAACCGAAATCCATGCCTGAAAATACAGTGGAACGTGTTGCAATGACAGTTAATGAAGGTAAAGAACTTAAAGATGCTGTTTTAGACGGTGGAGTGGTATGTGGTGCAATTTCAGAGGCTTGTCCAACTTCTCAATTTCAACCTGAATTTAGTGCAACAAAACCGGATGGATCATCCCCTCTAATGAGACTGCCAATAGAATTTGTGCGTTCAACTTTAGAGGAGCCTGTTGGCTATCACGCAACAATTGGGTCTAAAAGGAAATCTAAGAACAAGAGAAAGGCACGGGTTCGAAATGATATCACATTGGGCTTTTTGGTCTTTTTGGTGGGAGAAGTGATTTTGGCATTAGAAGAGTTTGCAATTGCTTTGGGAAAGTCAAATGATAGGTCCACTAGAAGAAAGGTTGTTGTAATTGCTTTCACAAAAACTAAGCATGTTTCTGGTGCAGCTCTAGGTCTAGAAGTCTGTTTTTATTAG

Protein sequence

MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSNTFQPQPDIHPPSVLPDLVPIPSAAPAPIPSPNLSDHTQIFVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHYVSPNTFRNRRAAEQDAARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATNPKSQKALGDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVERVAMTVNEGKELKDAVLDGGVVCGAISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVRSTLEEPVGYHATIGSKRKSKNKRKARVRNDITLGFLVFLVGEVILALEEFAIALGKSNDRSTRRKVVVIAFTKTKHVSGAALGLEVCFY

Homology

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BLAST of CsGy3G020970 vs. NCBI nr
Match: XP_004149792.1 (PREDICTED: uncharacterized protein LOC101213863 isoform X1 [Cucumis sativus])

HSP 1 Score: 694.5 bits (1791), Expect = 2.2e-196
Identity = 360/361 (99.72%), Postives = 361/361 (100.00%), Query Frame = 0


Query: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSNTFQPQPDIHPPSVLPDLVPIPSAA 60
           MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSNTFQPQPDIHPPSVLPDLVPIPSAA
Sbjct: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSNTFQPQPDIHPPSVLPDLVPIPSAA 60

Query: 61  XXXXXXPNLSDHTQIFVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHY 120
           XXXXXXPNLSDHTQIFVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHY
Sbjct: 61  XXXXXXPNLSDHTQIFVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHY 120

Query: 121 VSPNTFRNRRAAEQDAARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPI 180
           VSPNTFRNRRAAEQDAARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATNPKSQKAL 240
           YTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATNPKSQKAL
Sbjct: 181 YTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATNPKSQKAL 240

Query: 241 GDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVERVAMTVNEGKELKDAVLDGGVVCG 300
           GDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVERVAMTVNEGKELKDAVLDGG+VCG
Sbjct: 241 GDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVERVAMTVNEGKELKDAVLDGGMVCG 300

Query: 301 AISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVRSTLEEPVGYHATIGSKRKSKNKRKA 360
           AISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVRSTLEEPVGYHATIGSKRKSKNKRKA
Sbjct: 301 AISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVRSTLEEPVGYHATIGSKRKSKNKRKA 360

Query: 361 R 362
           R
Sbjct: 361 R 361

[Close]

BLAST of CsGy3G020970 vs. NCBI nr
Match: XP_011651405.1 (PREDICTED: double-stranded RNA-binding protein 4 isoform X2 [Cucumis sativus])

HSP 1 Score: 688.3 bits (1775), Expect = 1.6e-194
Identity = 359/361 (99.45%), Postives = 360/361 (99.72%), Query Frame = 0


Query: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSNTFQPQPDIHPPSVLPDLVPIPSAA 60
           MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSNTFQPQPDIHPPSVLPDLVPIPSAA
Sbjct: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSNTFQPQPDIHPPSVLPDLVPIPSAA 60

Query: 61  XXXXXXPNLSDHTQIFVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHY 120
           XXXXXXPNLSDHTQIFVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHY
Sbjct: 61  XXXXXXPNLSDHTQIFVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHY 120

Query: 121 VSPNTFRNRRAAEQDAARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPI 180
           VSPNTFRNRRAAEQDAARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATNPKSQKAL 240
           YTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLH DATNPKSQKAL
Sbjct: 181 YTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLH-DATNPKSQKAL 240

Query: 241 GDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVERVAMTVNEGKELKDAVLDGGVVCG 300
           GDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVERVAMTVNEGKELKDAVLDGG+VCG
Sbjct: 241 GDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVERVAMTVNEGKELKDAVLDGGMVCG 300

Query: 301 AISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVRSTLEEPVGYHATIGSKRKSKNKRKA 360
           AISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVRSTLEEPVGYHATIGSKRKSKNKRKA
Sbjct: 301 AISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVRSTLEEPVGYHATIGSKRKSKNKRKA 360

Query: 361 R 362
           R
Sbjct: 361 R 360

[Close]

BLAST of CsGy3G020970 vs. NCBI nr
Match: XP_008457066.1 (PREDICTED: uncharacterized protein LOC103496837 isoform X1 [Cucumis melo])

HSP 1 Score: 603.6 bits (1555), Expect = 5.2e-169
Identity = 311/361 (86.15%), Postives = 329/361 (91.14%), Query Frame = 0


Query: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSNTFQPQPDIHPPSVLPDLVPIPSAA 60
           ME SGTVEAGAPQQSPF SDSVPTVVTPPIPV+N +T Q QP+IHPPSVLPDLV IPSAA
Sbjct: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60

Query: 61  XXXXXXPNLSDHTQIFVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHY 120
                 PNLSD TQIFVYKNHLHEY QKA+IAVPVYQTIDEGSP LPK+RSTV++DEVHY
Sbjct: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120

Query: 121 VSPNTFRNRRAAEQDAARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPI 180
           VSPNTFRNRRAAEQDAAR+AFEYISKKTKDDAFLLLREDL+LCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATNPKSQKAL 240
           YTTKH++GSV  FQSTLVFDGVVYTSDL RTKKEAEQLAARAAILSLHEDA N KSQK L
Sbjct: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDAINIKSQKTL 240

Query: 241 GDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVERVAMTVNEGKELKDAVLDGGVVCG 300
            DIIASKVRFHAMLQKVKDS+FSQ QPKSMPENTVERVAMTVNE K +KDAV D GVVCG
Sbjct: 241 ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEDKNVKDAVSDSGVVCG 300

Query: 301 AISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVRSTLEEPVGYHATIGSKRKSKNKRKA 360
           AISEACPTS F+PEFS+TKP+GSSPL+RLPIEFV STLE PVG HAT GSKR+SKNKRKA
Sbjct: 301 AISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKA 360

Query: 361 R 362
           R
Sbjct: 361 R 361

[Close]

BLAST of CsGy3G020970 vs. NCBI nr
Match: XP_008457067.1 (PREDICTED: uncharacterized protein LOC103496837 isoform X2 [Cucumis melo])

HSP 1 Score: 597.4 bits (1539), Expect = 3.7e-167
Identity = 310/361 (85.87%), Postives = 328/361 (90.86%), Query Frame = 0


Query: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSNTFQPQPDIHPPSVLPDLVPIPSAA 60
           ME SGTVEAGAPQQSPF SDSVPTVVTPPIPV+N +T Q QP+IHPPSVLPDLV IPSAA
Sbjct: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60

Query: 61  XXXXXXPNLSDHTQIFVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHY 120
                 PNLSD TQIFVYKNHLHEY QKA+IAVPVYQTIDEGSP LPK+RSTV++DEVHY
Sbjct: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120

Query: 121 VSPNTFRNRRAAEQDAARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPI 180
           VSPNTFRNRRAAEQDAAR+AFEYISKKTKDDAFLLLREDL+LCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATNPKSQKAL 240
           YTTKH++GSV  FQSTLVFDGVVYTSDL RTKKEAEQLAARAAILSLH DA N KSQK L
Sbjct: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLH-DAINIKSQKTL 240

Query: 241 GDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVERVAMTVNEGKELKDAVLDGGVVCG 300
            DIIASKVRFHAMLQKVKDS+FSQ QPKSMPENTVERVAMTVNE K +KDAV D GVVCG
Sbjct: 241 ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEDKNVKDAVSDSGVVCG 300

Query: 301 AISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVRSTLEEPVGYHATIGSKRKSKNKRKA 360
           AISEACPTS F+PEFS+TKP+GSSPL+RLPIEFV STLE PVG HAT GSKR+SKNKRKA
Sbjct: 301 AISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKA 360

Query: 361 R 362
           R
Sbjct: 361 R 360

[Close]

BLAST of CsGy3G020970 vs. NCBI nr
Match: XP_011651406.1 (PREDICTED: double-stranded RNA-binding protein 3 isoform X3 [Cucumis sativus])

HSP 1 Score: 568.5 bits (1464), Expect = 1.8e-158
Identity = 307/361 (85.04%), Postives = 308/361 (85.32%), Query Frame = 0


Query: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSNTFQPQPDIHPPSVLPDLVPIPSAA 60
           MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSNTFQPQPDIHPPSVLPDLVPIPSAA
Sbjct: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSNTFQPQPDIHPPSVLPDLVPIPSAA 60

Query: 61  XXXXXXPNLSDHTQIFVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHY 120
           XXXXXXPNLSDHTQIFVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHY
Sbjct: 61  XXXXXXPNLSDHTQIFVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHY 120

Query: 121 VSPNTFRNRRAAEQDAARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPI 180
           VSPNTFRNRRAAEQDAARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATNPKSQKAL 240
           YTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLH            
Sbjct: 181 YTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLH------------ 240

Query: 241 GDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVERVAMTVNEGKELKDAVLDGGVVCG 300
                                                    VNEGKELKDAVLDGG+VCG
Sbjct: 241 -----------------------------------------VNEGKELKDAVLDGGMVCG 300

Query: 301 AISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVRSTLEEPVGYHATIGSKRKSKNKRKA 360
           AISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVRSTLEEPVGYHATIGSKRKSKNKRKA
Sbjct: 301 AISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVRSTLEEPVGYHATIGSKRKSKNKRKA 308

Query: 361 R 362
           R
Sbjct: 361 R 308

[Close]

BLAST of CsGy3G020970 vs. TAIR10
Match: AT1G09700.1 (dsRNA-binding domain-like superfamily protein)

HSP 1 Score: 104.0 bits (258), Expect = 2.3e-22
Identity = 61/161 (37.89%), Postives = 87/161 (54.04%), Query Frame = 0


Query: 76  FVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHYVSPNTFRNRRAAEQD 135
           +V+K+ L EY QK K+  PVY+ + EG      ++STV++D V Y S   F NR+AAEQ 
Sbjct: 14  YVFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLPGFFNRKAAEQS 73

Query: 136 AARVAFEYISKKTK-DDAFLLLREDLMLCKSILSEYTDKMGLERPIYTTK--HNQGSVAF 195
           AA VA   ++K ++          +  LCK++L EY  KM    P+Y  +     G V  
Sbjct: 74  AAEVALRELAKSSELSQCVSQPVHETGLCKNLLQEYAQKMNYAIPLYQCQKVETLGRVTQ 133

Query: 196 FQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATN 234
           F  T+   G+ YT    RTKK+AE  A R A+L++  D  N
Sbjct: 134 FTCTVEIGGIKYTGAATRTKKDAEISAGRTALLAIQSDTKN 174

[Close]

BLAST of CsGy3G020970 vs. TAIR10
Match: AT2G28380.1 (dsRNA-binding protein 2)

HSP 1 Score: 75.9 bits (185), Expect = 6.8e-14
Identity = 50/162 (30.86%), Postives = 79/162 (48.77%), Query Frame = 0


Query: 77  VYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHYVSPNTFRNRRAAEQDA 136
           +YKN L E  Q++   +P Y  I EG    P++++TV  +   + SP      R AE  A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 137 ARVAFEYISKKTKDDAFLL-LREDLMLCKSILSEYTDKMGLERPIYTT-KHNQGSVAFFQ 196
           A VA   +S +    +    + ++  + K++L E   ++G   P YTT +   G    F 
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 197 STLVFDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATNPKS 237
            T+   G+ +T D  + KK+AE+ AA AA  SL + A    S
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQLAKETSS 162

[Close]

BLAST of CsGy3G020970 vs. TAIR10
Match: AT3G26932.1 (dsRNA-binding protein 3)

HSP 1 Score: 75.5 bits (184), Expect = 8.9e-14
Identity = 46/155 (29.68%), Postives = 80/155 (51.61%), Query Frame = 0


Query: 77  VYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHYVSPNTFRNRRAAEQDA 136
           +YKN L E  Q++  ++P Y    EG    P+++++V  +   + SP      R AE  A
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 137 ARVAFEYISKKTKDDAFLL-LREDLMLCKSILSEYTDKMGLERPIYTT-KHNQGSVAFFQ 196
           A VA   +S K    +    + ++  + K++L E   + GL+ P+YT+ +   G +  F 
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 197 STLVFDGVVYTSDLGRTKKEAEQLAARAAILSLHE 230
            T+   G+ +  +  +TKK+AE+ AA AA  SL +
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRK 155

[Close]

BLAST of CsGy3G020970 vs. TAIR10
Match: AT5G41070.1 (dsRNA-binding protein 5)

HSP 1 Score: 73.6 bits (179), Expect = 3.4e-13
Identity = 51/177 (28.81%), Postives = 90/177 (50.85%), Query Frame = 0


Query: 77  VYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHYVSPNTFRNRRAAEQDA 136
           +YKN L E  Q++   +P Y  I EG    P+++++V  +   + SP      R AE  A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60

Query: 137 ARVAFEYISKKTKDDAFLL-LREDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAF--F 196
           A V+   +S +    +    + ++  + K++L E   + GL+ P+YT+  + GS  F  F
Sbjct: 61  AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRS-GSCHFPGF 120

Query: 197 QSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLH-----EDATNPKSQKALGDIIA 246
             T+   G+ +T +  +TKK+AE+ AA AA  SL      +     K Q+A+  +++
Sbjct: 121 SCTVELAGMTFTGESAKTKKQAEKNAAIAAWSSLKKMSSLDSQDEEKEQEAVARVLS 176

[Close]

BLAST of CsGy3G020970 vs. TAIR10
Match: AT3G62800.1 (double-stranded-RNA-binding protein 4)

HSP 1 Score: 65.9 bits (159), Expect = 7.1e-11
Identity = 47/165 (28.48%), Postives = 75/165 (45.45%), Query Frame = 0


Query: 77  VYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHYVSPNTFRNRRAAEQDA 136
           VYK  L  Y  +  + +PVY    EG P  P++R  V      + S   F   ++AE  A
Sbjct: 4   VYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAEHAA 63

Query: 137 ARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVA-FFQS 196
           A++A   ++ ++ +   +         K++L E   K     P Y T  +  S A  F S
Sbjct: 64  AKIAVASLTPQSPEGIDVAY-------KNLLQEIAQKESSLLPFYATATSGPSHAPTFTS 123

Query: 197 TLVFDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATNPKSQKAL 241
           T+ F G V++ +  +TKK AE  AA+ A +S+    +N      L
Sbjct: 124 TVEFAGKVFSGEEAKTKKLAEMSAAKVAFMSIKNGNSNQTGSPTL 161

[Close]

BLAST of CsGy3G020970 vs. Swiss-Prot
Match: sp|Q6YW64|DRB4_ORYSJ (Double-stranded RNA-binding protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB4 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 2.2e-22
Identity = 71/192 (36.98%), Postives = 110/192 (57.29%), Query Frame = 0


Query: 78  YKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHYVSPNTFRNRRAAEQDAA 137
           YK+ L EY Q+A   +P+Y T  +G     K++STVMVD   + S    R  + AEQDAA
Sbjct: 39  YKSKLQEYLQQANKQLPIYCTKCKGEHHQLKFKSTVMVDGEEFSSTFCHRRVKDAEQDAA 98

Query: 138 RVAFEYISKKTK-----DDAFLLLREDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAF 197
           +VA++ + ++ +      D F L+ +D++  KSIL EYT K   ++P Y+    +GSV  
Sbjct: 99  KVAYDTLLERKETETDDTDVFELIDQDVVFSKSILHEYTTKTKTDQPEYSVTKTEGSVTP 158

Query: 198 FQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATNPKSQKALGDIIASKVRFHA 257
           + S++ F G  YT    R KK+AEQ AARAA+ SL   ATN  S   +  I+ SK +   
Sbjct: 159 YVSSVSFAGHTYTGGAARNKKDAEQKAARAAVKSLL--ATNYTS---MAKIVRSKEK--- 218

Query: 258 MLQKVKDSNFSQ 265
           +++ +  S +++
Sbjct: 219 LIRAISPSGYNK 222

[Close]

BLAST of CsGy3G020970 vs. Swiss-Prot
Match: sp|O04492|DRB1_ARATH (Double-stranded RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=DRB1 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 4.2e-21
Identity = 61/161 (37.89%), Postives = 87/161 (54.04%), Query Frame = 0


Query: 76  FVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHYVSPNTFRNRRAAEQD 135
           +V+K+ L EY QK K+  PVY+ + EG      ++STV++D V Y S   F NR+AAEQ 
Sbjct: 14  YVFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLPGFFNRKAAEQS 73

Query: 136 AARVAFEYISKKTK-DDAFLLLREDLMLCKSILSEYTDKMGLERPIYTTK--HNQGSVAF 195
           AA VA   ++K ++          +  LCK++L EY  KM    P+Y  +     G V  
Sbjct: 74  AAEVALRELAKSSELSQCVSQPVHETGLCKNLLQEYAQKMNYAIPLYQCQKVETLGRVTQ 133

Query: 196 FQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATN 234
           F  T+   G+ YT    RTKK+AE  A R A+L++  D  N
Sbjct: 134 FTCTVEIGGIKYTGAATRTKKDAEISAGRTALLAIQSDTKN 174

[Close]

BLAST of CsGy3G020970 vs. Swiss-Prot
Match: sp|Q0IV63|DRB7_ORYSJ (Double-stranded RNA-binding protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB7 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 5.5e-21
Identity = 67/186 (36.02%), Postives = 94/186 (50.54%), Query Frame = 0


Query: 46  PPSVLP----DLVPIPSAAXXXXXXPNLSDHTQIFVYKNHLHEYTQKAKIAVPVYQTIDE 105
           PP+ LP    +  P P+ A       N       +V+K+ L EY QKA +  P Y T  E
Sbjct: 4   PPTPLPPETANTSPAPNGATAGIRVEN------CYVFKSRLQEYAQKAGLQTPEYHTFKE 63

Query: 106 GSPSLPKYRSTVMVDEVHYVSPNTFRNRRAAEQDAARVAFEYISKKTKDDAFLLLREDLM 165
           G    P ++STV+++   Y S   F NR+AAEQ AA VA   I K    +A +   ++  
Sbjct: 64  GPSHEPVFKSTVVINNTSYDSLPGFFNRKAAEQSAAEVALMEIVKSIPANANIPAVQETG 123

Query: 166 LCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAAR 225
           LCK++L EY  KM    P Y    +   +A F  T+   G+ Y     RTKK+AE  AAR
Sbjct: 124 LCKNLLQEYAQKMNYAIPSYICTKSASGLAPFICTVEIGGIQYIGAAARTKKDAEIKAAR 183

Query: 226 AAILSL 228
            A+L++
Sbjct: 184 TALLAI 183

[Close]

BLAST of CsGy3G020970 vs. Swiss-Prot
Match: sp|Q0DJA3|DRB3_ORYSJ (Double-stranded RNA-binding protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB3 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 9.4e-21
Identity = 59/152 (38.82%), Postives = 82/152 (53.95%), Query Frame = 0


Query: 76  FVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHYVSPNTFRNRRAAEQD 135
           +V+K+ L EY QKA +  P Y T  EG    P ++STV+++   Y S   F NR+AAEQ 
Sbjct: 34  YVFKSRLQEYAQKAGLQTPEYHTSKEGPSHEPVFKSTVVINNTSYGSLPGFSNRKAAEQS 93

Query: 136 AARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQS 195
           AA VA   I K    +A +   ++  LCK++L EY  KM    P Y        +A F  
Sbjct: 94  AAEVALMEIVKSIPANANIPAVQETGLCKNLLQEYAQKMNYAIPSYICTKPASGLAPFLC 153

Query: 196 TLVFDGVVYTSDLGRTKKEAEQLAARAAILSL 228
           T+   G+ Y     RTKK+AE  AAR A+L++
Sbjct: 154 TVEIGGIQYIGAAARTKKDAEIKAARTALLAI 185

[Close]

BLAST of CsGy3G020970 vs. Swiss-Prot
Match: sp|Q0IQN6|DRB8_ORYSJ (Double-stranded RNA-binding protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB8 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.6e-20
Identity = 66/186 (35.48%), Postives = 93/186 (50.00%), Query Frame = 0


Query: 46  PPSVLP----DLVPIPSAAXXXXXXPNLSDHTQIFVYKNHLHEYTQKAKIAVPVYQTIDE 105
           PP+ LP    +  P P+ A       N       +V+K+ L EY QK  +  P Y T  E
Sbjct: 4   PPTPLPPETANTSPAPNGATAGIRVEN------CYVFKSRLQEYAQKTGLQTPEYHTFKE 63

Query: 106 GSPSLPKYRSTVMVDEVHYVSPNTFRNRRAAEQDAARVAFEYISKKTKDDAFLLLREDLM 165
           G    P ++STV+++   Y S   F NR+AAEQ AA VA   I K    +A +   ++  
Sbjct: 64  GPSHEPVFKSTVVINNTSYDSLPGFFNRKAAEQSAAEVALMEIVKSIPANANIPAVQETG 123

Query: 166 LCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAAR 225
           LCK++L EY  KM    P Y    +   +A F  T+   G+ Y     RTKK+AE  AAR
Sbjct: 124 LCKNLLQEYAQKMNYAIPSYICTKSASGLAPFICTVEIGGIQYIGAAARTKKDAEIKAAR 183

Query: 226 AAILSL 228
            A+L++
Sbjct: 184 TALLAI 183

[Close]

BLAST of CsGy3G020970 vs. TrEMBL
Match: tr|A0A1S3C485|A0A1S3C485_CUCME (uncharacterized protein LOC103496837 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496837 PE=4 SV=1)

HSP 1 Score: 603.6 bits (1555), Expect = 3.4e-169
Identity = 311/361 (86.15%), Postives = 329/361 (91.14%), Query Frame = 0


Query: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSNTFQPQPDIHPPSVLPDLVPIPSAA 60
           ME SGTVEAGAPQQSPF SDSVPTVVTPPIPV+N +T Q QP+IHPPSVLPDLV IPSAA
Sbjct: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60

Query: 61  XXXXXXPNLSDHTQIFVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHY 120
                 PNLSD TQIFVYKNHLHEY QKA+IAVPVYQTIDEGSP LPK+RSTV++DEVHY
Sbjct: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120

Query: 121 VSPNTFRNRRAAEQDAARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPI 180
           VSPNTFRNRRAAEQDAAR+AFEYISKKTKDDAFLLLREDL+LCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATNPKSQKAL 240
           YTTKH++GSV  FQSTLVFDGVVYTSDL RTKKEAEQLAARAAILSLHEDA N KSQK L
Sbjct: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDAINIKSQKTL 240

Query: 241 GDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVERVAMTVNEGKELKDAVLDGGVVCG 300
            DIIASKVRFHAMLQKVKDS+FSQ QPKSMPENTVERVAMTVNE K +KDAV D GVVCG
Sbjct: 241 ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEDKNVKDAVSDSGVVCG 300

Query: 301 AISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVRSTLEEPVGYHATIGSKRKSKNKRKA 360
           AISEACPTS F+PEFS+TKP+GSSPL+RLPIEFV STLE PVG HAT GSKR+SKNKRKA
Sbjct: 301 AISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKA 360

Query: 361 R 362
           R
Sbjct: 361 R 361

[Close]

BLAST of CsGy3G020970 vs. TrEMBL
Match: tr|A0A1S3C4R2|A0A1S3C4R2_CUCME (uncharacterized protein LOC103496837 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496837 PE=4 SV=1)

HSP 1 Score: 597.4 bits (1539), Expect = 2.5e-167
Identity = 310/361 (85.87%), Postives = 328/361 (90.86%), Query Frame = 0


Query: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSNTFQPQPDIHPPSVLPDLVPIPSAA 60
           ME SGTVEAGAPQQSPF SDSVPTVVTPPIPV+N +T Q QP+IHPPSVLPDLV IPSAA
Sbjct: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60

Query: 61  XXXXXXPNLSDHTQIFVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHY 120
                 PNLSD TQIFVYKNHLHEY QKA+IAVPVYQTIDEGSP LPK+RSTV++DEVHY
Sbjct: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120

Query: 121 VSPNTFRNRRAAEQDAARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPI 180
           VSPNTFRNRRAAEQDAAR+AFEYISKKTKDDAFLLLREDL+LCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATNPKSQKAL 240
           YTTKH++GSV  FQSTLVFDGVVYTSDL RTKKEAEQLAARAAILSLH DA N KSQK L
Sbjct: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLH-DAINIKSQKTL 240

Query: 241 GDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVERVAMTVNEGKELKDAVLDGGVVCG 300
            DIIASKVRFHAMLQKVKDS+FSQ QPKSMPENTVERVAMTVNE K +KDAV D GVVCG
Sbjct: 241 ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEDKNVKDAVSDSGVVCG 300

Query: 301 AISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVRSTLEEPVGYHATIGSKRKSKNKRKA 360
           AISEACPTS F+PEFS+TKP+GSSPL+RLPIEFV STLE PVG HAT GSKR+SKNKRKA
Sbjct: 301 AISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKA 360

Query: 361 R 362
           R
Sbjct: 361 R 360

[Close]

BLAST of CsGy3G020970 vs. TrEMBL
Match: tr|A0A1S3C4M5|A0A1S3C4M5_CUCME (double-stranded RNA-binding protein 4-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103496837 PE=4 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 1.5e-135
Identity = 264/361 (73.13%), Postives = 281/361 (77.84%), Query Frame = 0


Query: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSNTFQPQPDIHPPSVLPDLVPIPSAA 60
           ME SGTVEAGAPQQSPF SDSVPTVVTPPIPV+N +T Q QP+IHPPSVLPDLV IPSAA
Sbjct: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60

Query: 61  XXXXXXPNLSDHTQIFVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHY 120
                 PNLSD TQIFVYKNHLHEY QKA+IAVPVYQTIDEGSP LPK+RSTV++DEVHY
Sbjct: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120

Query: 121 VSPNTFRNRRAAEQDAARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPI 180
           VSPNTFRNRRAAEQDAAR+AFEYISKKTKDDAFLLLREDL+LCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATNPKSQKAL 240
           YTTKH++GSV  FQSTLVFDGVVYTSDL RTKKEAEQLAARAAILSLH            
Sbjct: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLH------------ 240

Query: 241 GDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVERVAMTVNEGKELKDAVLDGGVVCG 300
                                                    VNE K +KDAV D GVVCG
Sbjct: 241 -----------------------------------------VNEDKNVKDAVSDSGVVCG 300

Query: 301 AISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVRSTLEEPVGYHATIGSKRKSKNKRKA 360
           AISEACPTS F+PEFS+TKP+GSSPL+RLPIEFV STLE PVG HAT GSKR+SKNKRKA
Sbjct: 301 AISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKA 308

Query: 361 R 362
           R
Sbjct: 361 R 308

[Close]

BLAST of CsGy3G020970 vs. TrEMBL
Match: tr|A0A0A0LCN7|A0A0A0LCN7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G345370 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 3.4e-108
Identity = 202/205 (98.54%), Postives = 204/205 (99.51%), Query Frame = 0


Query: 157 REDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAE 216
           + DLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAE
Sbjct: 97  KHDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAE 156

Query: 217 QLAARAAILSLHEDATNPKSQKALGDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVE 276
           QLAARAAILSLHEDATNPKSQKALGDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVE
Sbjct: 157 QLAARAAILSLHEDATNPKSQKALGDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVE 216

Query: 277 RVAMTVNEGKELKDAVLDGGVVCGAISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVRS 336
           RVAMTVNEGKELKDAVLDGG+VCGAISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVRS
Sbjct: 217 RVAMTVNEGKELKDAVLDGGMVCGAISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVRS 276

Query: 337 TLEEPVGYHATIGSKRKSKNKRKAR 362
           TLEEPVGYHATIGSKRKSKNKRKAR
Sbjct: 277 TLEEPVGYHATIGSKRKSKNKRKAR 301

[Close]

BLAST of CsGy3G020970 vs. TrEMBL
Match: tr|A0A0A0LAZ4|A0A0A0LAZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G345380 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.4e-77
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSNTFQPQPDIHPPSVLPDLVPIPSAA 60
           MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSNTFQPQPDIHPPSVLPDLVPIPSAA
Sbjct: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSNTFQPQPDIHPPSVLPDLVPIPSAA 60

Query: 61  XXXXXXPNLSDHTQIFVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHY 120
           XXXXXXPNLSDHTQIFVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHY
Sbjct: 61  XXXXXXPNLSDHTQIFVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHY 120

Query: 121 VSPNTFRNRRAAEQDAARVAFEYISKKTKDDAFLLLRE 159
           VSPNTFRNRRAAEQDAARVAFEYISKKTKDDAFLLLRE
Sbjct: 121 VSPNTFRNRRAAEQDAARVAFEYISKKTKDDAFLLLRE 158

The following BLAST results are available for this feature:

BLAST of CsGy3G020970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149792.1	2.2e-196	99.72	PREDICTED: uncharacterized protein LOC101213863 isoform X1 [Cucumis sativus]	[more]
XP_011651405.1	1.6e-194	99.45	PREDICTED: double-stranded RNA-binding protein 4 isoform X2 [Cucumis sativus]	[more]
XP_008457066.1	5.2e-169	86.15	PREDICTED: uncharacterized protein LOC103496837 isoform X1 [Cucumis melo]	[more]
XP_008457067.1	3.7e-167	85.87	PREDICTED: uncharacterized protein LOC103496837 isoform X2 [Cucumis melo]	[more]
XP_011651406.1	1.8e-158	85.04	PREDICTED: double-stranded RNA-binding protein 3 isoform X3 [Cucumis sativus]	[more]

BLAST of CsGy3G020970 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09700.1	2.3e-22	37.89	dsRNA-binding domain-like superfamily protein	[more]
AT2G28380.1	6.8e-14	30.86	dsRNA-binding protein 2	[more]
AT3G26932.1	8.9e-14	29.68	dsRNA-binding protein 3	[more]
AT5G41070.1	3.4e-13	28.81	dsRNA-binding protein 5	[more]
AT3G62800.1	7.1e-11	28.48	double-stranded-RNA-binding protein 4	[more]

BLAST of CsGy3G020970 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6YW64\|DRB4_ORYSJ	2.2e-22	36.98	Double-stranded RNA-binding protein 4 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
sp\|O04492\|DRB1_ARATH	4.2e-21	37.89	Double-stranded RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=DRB1 PE...	[more]
sp\|Q0IV63\|DRB7_ORYSJ	5.5e-21	36.02	Double-stranded RNA-binding protein 7 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
sp\|Q0DJA3\|DRB3_ORYSJ	9.4e-21	38.82	Double-stranded RNA-binding protein 3 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
sp\|Q0IQN6\|DRB8_ORYSJ	1.6e-20	35.48	Double-stranded RNA-binding protein 8 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of CsGy3G020970 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C485\|A0A1S3C485_CUCME	3.4e-169	86.15	uncharacterized protein LOC103496837 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3C4R2\|A0A1S3C4R2_CUCME	2.5e-167	85.87	uncharacterized protein LOC103496837 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3C4M5\|A0A1S3C4M5_CUCME	1.5e-135	73.13	double-stranded RNA-binding protein 4-like isoform X3 OS=Cucumis melo OX=3656 GN...	[more]
tr\|A0A0A0LCN7\|A0A0A0LCN7_CUCSA	3.4e-108	98.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G345370 PE=4 SV=1	[more]
tr\|A0A0A0LAZ4\|A0A0A0LAZ4_CUCSA	1.4e-77	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G345380 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR014720	dsRBD_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G020970.1	CsGy3G020970.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014720	Double-stranded RNA-binding domain	SMART	SM00358	DRBM_3	coord: 163..228 e-value: 1.8E-7 score: 40.8 coord: 78..145 e-value: 5.5E-11 score: 52.5
IPR014720	Double-stranded RNA-binding domain	PFAM	PF00035	dsrm	coord: 78..143 e-value: 5.1E-9 score: 36.6 coord: 164..226 e-value: 6.1E-11 score: 42.8
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 77..146 score: 11.237
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 193..229 score: 9.708
IPR014720	Double-stranded RNA-binding domain	CDD	cd00048	DSRM	coord: 164..227 e-value: 6.05409E-10 score: 54.5859
IPR014720	Double-stranded RNA-binding domain	CDD	cd00048	DSRM	coord: 78..144 e-value: 7.63526E-10 score: 54.2007
None	No IPR available	GENE3D	G3DSA:3.30.160.20		coord: 154..232 e-value: 7.0E-17 score: 62.9 coord: 67..150 e-value: 1.7E-17 score: 64.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..47
None	No IPR available	PANTHER	PTHR11207:SF8	SUBFAMILY NOT NAMED	coord: 54..325
None	No IPR available	PANTHER	PTHR11207	RIBONUCLEASE III	coord: 54..325
None	No IPR available	SUPERFAMILY	SSF54768	dsRNA-binding domain-like	coord: 74..144
None	No IPR available	SUPERFAMILY	SSF54768	dsRNA-binding domain-like	coord: 160..227

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G020970	Cla013177	Watermelon (97103) v1	cgybwmB232
CsGy3G020970	Csa3G345370	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G020970	ClCG05G011010	Watermelon (Charleston Gray)	cgybwcgB217
CsGy3G020970	CSPI03G21780	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G020970	CsaV3_3G021570	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G020970	Cla97C05G093280	Watermelon (97103) v2	cgybwmbB209

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G020970	Melon (DHL92) v3.6.1	cgybmedB216
CsGy3G020970	Silver-seed gourd	carcgybB0757
CsGy3G020970	Wax gourd	cgybwgoB281
CsGy3G020970	Cucurbita maxima (Rimu)	cgybcmaB308
CsGy3G020970	Cucurbita maxima (Rimu)	cgybcmaB368
CsGy3G020970	Cucurbita moschata (Rifu)	cgybcmoB281
CsGy3G020970	Cucurbita moschata (Rifu)	cgybcmoB339
CsGy3G020970	Cucurbita pepo (Zucchini)	cgybcpeB380
CsGy3G020970	Cucurbita pepo (Zucchini)	cgybcpeB397
CsGy3G020970	Bottle gourd (USVL1VR-Ls)	cgyblsiB192
CsGy3G020970	Bottle gourd (USVL1VR-Ls)	cgyblsiB199
CsGy3G020970	Melon (DHL92) v3.5.1	cgybmeB212