CsGy3G018440 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G018440
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr3 : 14580130 .. 14582398 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTTGCCTTGAAGCAATATGTGAGGTATGATATTAAAAATGTTACTTTTAGTATATTAAACATGTTACTATTTGTTATAGCTAAAATTAGCCTCCTTAGGATGGCCATGGGAGAGTCTAGCAAAACTTAGAGAGAACTACGTGGAACCCATAAGGTAATTTCATGCAAGAACGAGTGTAGTTGAAATTAACACTCAAATTTCAACTAATTCAATGGGAGGAGCATCAAGCACAAAGAGCTTATTCACCTAATTCGACTAAACTGAGCTAATCCCACTTCATGTAAGATTTCTCTACTAAGCCAAGTCAAAGGTAAAATATTATTTTACTTCTCAAGTAAAATTTTGACTTACACTATTAGAAAATGGAGATCTTCCGACGCACAAAATCGTCAGAAGATATATGAAAAAGCATAGAAAAAAGTTCTCCTTACTCGTAAATGTGCGTTGGGATCTGAATCAGGAAAGGATTTTTCGACGCACAAAATGAAGCGTCAAGAGATCATCTTCACATCTCTCGACATTGTATGGTTGGCTTCGGGAGATTTGAGACATGCAAAGGATCTCTAGATGTTTCATTTTGTGAGTCGAAAAATCTTCTATTTTTTTAAAAAAAATATATATTGTCCATTATTAAATAGAAGATATATATTTTGCAATTTTGTTGGGTAAAACAACTAAGTGAAAAGAATGAATGGATGGGATGTCACCATCATCAAACAAGGGCAACTTGAATGATTGGTTGAAGTGGTATGGAATAATACTTTTGTTCCTATGCAACACAATGTTTCTTAAATTAAAAACGCCAACCAAAGAAAAAACCCTTATTCAAAGAGAGAAGAAAATAGATTTTCTTTCCTCCTTTCCTTTCAGTCTCTACCTTTTCCCTTCTTTATAATTGTTTTCTTAAGTTCCTCTTGGATAGAAAATTTAAAAGTTGCCTAAGATTCTTTCAATCTGAAAATCCATACATGAATTTTCATATTTTTTTTTCAATCCACATTCCCACTACAACTAAAGATTGCTCTAGTAGGATTAAATCAAAGGATCGTCCATTTTCCTTCAAGGTTCAATGCAGAAAACTCAAAAAGGCTGCAACACATAGTAATAATACTCTTCTTTAATTCTTCTTTAGAGTAGAAAAAGTAATTAACCAACTTCTCTGGTAAGATCTCAGTCGATGCCAAGCATGAGACCTCGCATCATCGAAACCCATCCCATCAGATAACCAAACAAAATCAGACAACCAAGTGATTACGAAGATGAAAATGATTTACTTGGAATGAAGTGGTTCTGACGTTGGACGAAAAAGTAGTTCCAACAATGGAAAGAAGAAAAAGAAAGCCTTGAAAGCCCTAAAAATTTTCCTCCTTCACAAATCTATAAAATACAGATTGGGGGAGGGTGGCCAACTTTTGACGTCGTTCAATATGCGTCAAGAGTTCCCCAAACAACTCCCGACGTCGCTCAATGTGTGTCGGGAGTTTCCAAATAATCATGACGTCGTTCAATATGCGTCGAGAGTTCCCAAACATCTCCTAACACTTACTAGTATTGTTGGGAATTGGCCTCCATGTCACAACGTCTCCCAACACTGCGTCGAAAGTTTTCAAACAAATCTCAACGCTTTAGTTGTGCGTTGTGCGTCGAAAGATACTATATCTCCTACCACTCCAATTGGAATGTCGGGAGATGTCCTATCTCTCAATGACCTTTCTTCCAACTAGAGGGGTAAGAATATGGGTTGAACCCGAATAACTTGGACTACTCAACCCATATTATAAGGGCTGGATTGGGTTGGATTGAAAATTTTGGTTATTTTCGGATTGGGTTGGGTCTCAGATTGGAGGGTTGAAAATTTTAGTTCAACCCAACCCAACCCGAATTAATATAATATAATATAATATATATTATATTTTTTATTTTATTTTATTTAATATTTAAAAACAATTAGGTAGAAAAAGAAATCCAACGCACATTCCTACTTCCTTTCCACTTTCTCTTTCCTGATTCCTCTTTCTCCATTTCACGATTTCTTCTCCTCTCCGCCATTTCTCATCTGAAATTTCACTATCTCAGTTCGTCTTCTTCCTTTCCTCTCCATCGTATCTTAGTTCATCTTCTTCCTCTCCCCTCCTCCGTATCTCACCAGTCGTCTTCGTCTCTGACTTTGCTCATTCGCCTTCGCTTCTGACTTTGGCCATTCGTCTTCACCGTCAGCGTCCTCCCTCTCCTTGTCGTTTGTTTCCTCGTTGTCCGTCTCCTTAG

mRNA sequence

ATGCTTTGCCTTGAAGCAATATGTGAGCTAAAATTAGCCTCCTTAGGATGGCCATGGGAGAGTCTAGCAAAACTTAGAGAGAACTACGTGGAACCCATAAGAGTAGAAAAATTCGTCTTCTTCCTTTCCTCTCCATCGTATCTTAGTTCATCTTCTTCCTCTCCCCTCCTCCGTATCTCACCAGTCGTCTTCGTCTCTGACTTTGCTCATTCGCCTTCGCTTCTGACTTTGGCCATTCGTCTTCACCGTCAGCGTCCTCCCTCTCCTTGTCGTTTGTTTCCTCGTTGTCCGTCTCCTTAG

Coding sequence (CDS)

ATGCTTTGCCTTGAAGCAATATGTGAGCTAAAATTAGCCTCCTTAGGATGGCCATGGGAGAGTCTAGCAAAACTTAGAGAGAACTACGTGGAACCCATAAGAGTAGAAAAATTCGTCTTCTTCCTTTCCTCTCCATCGTATCTTAGTTCATCTTCTTCCTCTCCCCTCCTCCGTATCTCACCAGTCGTCTTCGTCTCTGACTTTGCTCATTCGCCTTCGCTTCTGACTTTGGCCATTCGTCTTCACCGTCAGCGTCCTCCCTCTCCTTGTCGTTTGTTTCCTCGTTGTCCGTCTCCTTAG

Protein sequence

MLCLEAICELKLASLGWPWESLAKLRENYVEPIRVEKFVFFLSSPSYLSSSSSSPLLRISPVVFVSDFAHSPSLLTLAIRLHRQRPPSPCRLFPRCPSP
Homology
[Close]
BLAST of CsGy3G018440 vs. NCBI nr
Match: KGN57542.1 (hypothetical protein Csa_3G207910 [Cucumis sativus])

HSP 1 Score: 123.6 bits (309), Expect = 3.7e-25
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 38  FVFFLSSPSYLSSSSSSPLLRISPVVFVSDFAHSPSLLTLAIRLHRQRPPSPCRLFPRCP 97
           FVFFLSSPSYLSSSSSSPLLRISPVVFVSDFAHSPSLLTLAIRLHRQRPPSPCRLFPRCP
Sbjct: 89  FVFFLSSPSYLSSSSSSPLLRISPVVFVSDFAHSPSLLTLAIRLHRQRPPSPCRLFPRCP 148

Query: 98  SP 100
           SP
Sbjct: 149 SP 150

[Close]
BLAST of CsGy3G018440 vs. TrEMBL
Match: tr|A0A0A0LAA6|A0A0A0LAA6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G207910 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.4e-25
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 38  FVFFLSSPSYLSSSSSSPLLRISPVVFVSDFAHSPSLLTLAIRLHRQRPPSPCRLFPRCP 97
           FVFFLSSPSYLSSSSSSPLLRISPVVFVSDFAHSPSLLTLAIRLHRQRPPSPCRLFPRCP
Sbjct: 89  FVFFLSSPSYLSSSSSSPLLRISPVVFVSDFAHSPSLLTLAIRLHRQRPPSPCRLFPRCP 148

Query: 98  SP 100
           SP
Sbjct: 149 SP 150

The following BLAST results are available for this feature:
BLAST of CsGy3G018440 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57542.13.7e-25100.00hypothetical protein Csa_3G207910 [Cucumis sativus][more]
BLAST of CsGy3G018440 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy3G018440 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy3G018440 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LAA6|A0A0A0LAA6_CUCSA2.4e-25100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G207910 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G018440.1CsGy3G018440.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy3G018440Csa3G207910Cucumber (Chinese Long) v2cgybcuB109
CsGy3G018440CSPI03G18580Wild cucumber (PI 183967)cgybcpiB110
CsGy3G018440CsaV3_3G018630Cucumber (Chinese Long) v3cgybcucB117
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy3G018440Cucumber (Gy14) v2cgybcgybB115
CsGy3G018440Cucurbita maxima (Rimu)cgybcmaB295
CsGy3G018440Cucurbita maxima (Rimu)cgybcmaB332
CsGy3G018440Cucurbita maxima (Rimu)cgybcmaB379
CsGy3G018440Cucurbita maxima (Rimu)cgybcmaB410
CsGy3G018440Cucurbita moschata (Rifu)cgybcmoB270
CsGy3G018440Cucurbita moschata (Rifu)cgybcmoB301
CsGy3G018440Cucurbita moschata (Rifu)cgybcmoB352
CsGy3G018440Cucurbita moschata (Rifu)cgybcmoB386
CsGy3G018440Cucurbita pepo (Zucchini)cgybcpeB317
CsGy3G018440Cucurbita pepo (Zucchini)cgybcpeB336
CsGy3G018440Cucurbita pepo (Zucchini)cgybcpeB362
CsGy3G018440Cucumber (Chinese Long) v2cgybcuB151
CsGy3G018440Bottle gourd (USVL1VR-Ls)cgyblsiB173
CsGy3G018440Bottle gourd (USVL1VR-Ls)cgyblsiB198
CsGy3G018440Melon (DHL92) v3.5.1cgybmeB160
CsGy3G018440Melon (DHL92) v3.5.1cgybmeB210
CsGy3G018440Melon (DHL92) v3.6.1cgybmedB160
CsGy3G018440Melon (DHL92) v3.6.1cgybmedB215
CsGy3G018440Watermelon (Charleston Gray)cgybwcgB197
CsGy3G018440Watermelon (Charleston Gray)cgybwcgB214
CsGy3G018440Watermelon (97103) v1cgybwmB229
CsGy3G018440Watermelon (97103) v1cgybwmB253
CsGy3G018440Wild cucumber (PI 183967)cgybcpiB153
CsGy3G018440Silver-seed gourdcarcgybB0221
CsGy3G018440Silver-seed gourdcarcgybB0380
CsGy3G018440Silver-seed gourdcarcgybB0650
CsGy3G018440Cucumber (Chinese Long) v3cgybcucB156
CsGy3G018440Watermelon (97103) v2cgybwmbB190
CsGy3G018440Watermelon (97103) v2cgybwmbB206
CsGy3G018440Wax gourdcgybwgoB271