CsGy3G017560 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G017560
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionE3 ubiquitin-protein ligase
LocationChr3 : 13513836 .. 13515659 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAATTCAAAGGACGAATCAACCCCTTCCTTTCGTCACAAAAGAAGGAATTTGATGAAGAACAAAAAACAAGTCCTCTTTCACAGTCGAAAAGCGAACTGATTTTACGATTCTTTATAGTTGAAGAAAAAGGAAAAGGAAAATGGAGGATTCTCGATCATCAGACGGCGGAAGTGAGAGGCGAAGTTCCGTCATTAGTAGGAGAGGGACGAACGGGACGTTGAACGTCATATTTACTGATCCGCAGATTCTCGATTGCTATATTTGTTGCGAACCCTTGTCAATTCCTGTTTTCCAGGTCTCATTAAAACTCTCTTCTCCTTTAAAATTGTGTTTATTGTTCATCTGGATACTACTGATGCTTTGTTTTTTCTCGCATAGCTTTTTTGGTTTTTGTTACTTTGGATACTGTAGTTTCGCTTGTGTGTGGTTGTTGCTGTTGACGATTTTAAAATCCCCTTTTCTTTGAGCTTTTCTCATTTTCTCTTTTCGAAGTTTATTGTTTAGACTATGCATTTCCATTGGAAGTAATTATAGATTGTTATGGAAATTCTGGAGTTATGATGTAAATAGTCTTAGACAATGGGAGAAAATTGCTTTACCTTGTTTATATTATCTTGAGTAAATGTTCGAATCAAACGACAGTTTATTTGATTTAACTTCAACTTTTCAATTGTATGGATTATTGGATTTTCTTCACTGTTTAGAAACATGAACTTGAAGGTATAGATATAGAAGAACATCAAGTTTATATTTGGGTTTATAGTCTCTTATATTCATGATTTTATTTGATCTCATAACATATACTTTGGTTGTTGGATGTATTAGTGTGAGAATGGGCATATTGCTTGCTCTAGCTGCTGCACCAAAGCTCAGAATAAATGCCCTAGCTGCACCTTAGCAATTGGCTACATACGTTGCAGGGCAATTGAGAAGGTTTTGGAATCAATCAAGTTACCATGTCAAAACGCAATATACGGATGCAAAACCGTGATGGGTTTGAACCTGATAAACGACCATGAGTCCTTATGCAGATATGAACCCTGCTCATGCCCTTTGGACAATTGCACCTTTGTTGGTTCAACAGAGCAGTTGGGCTTACACTTCACCAAAAAACACAAAAACTCAGCCAAAATCTTCTCATACAATACGAGGTTCACTATATGCTTGAACAATGGTGATACTCATCGTATCCTTAAAGCAGAGAATGATGGAGTTTTGTTCTTCCTATCTTACACATTTGAAATTTTTGGGAATGCTGTAACTATGAACCGGATTGGACCTTTGTCATCTGAGAAAAAGTTCTGTTATGAAATTAAAGCCAAAACACTGGGGAGTGTTCTTTCTTTACAATCAATAGCAAAGGAGATCCAAGGTTTGATAAAAGTTCCTCCTTCCAAGGGATCACTTTTGATTCCTAACGAGTACTTTGGATCTTCCACCCAGACTATGTTGGAGATTTGCATTTGGCCTGCACACTAAAGACAAAAACTGTGAATCAATAGCACGTTTGCTGATCTTCTTGGTTCATTGAACTTTGAATCTTTCTGGCTGCTTTTTTTTATCTTTTCAAAGGACTTGTGTCTACTTTTGTACATATTATCATATTTTGTCTTGGATAGATACCTAGGACATCTTTTTTATAATTTTGTATCTATTATCATTTTTCGTACACCTAAACCTTAAAAGAATTGTGTAAAAAATAAAAAATGTTAGTTTGACCTAGTTTTATCATTTTTCGTACATCTAAACCTTAAAAGAATTGTGTAAAAAATGTTAGTTTGACCTTGTTTTATAATCCTTTGTTTAGTTGCGTTAAAAAAA

mRNA sequence

AAAAATTCAAAGGACGAATCAACCCCTTCCTTTCGTCACAAAAGAAGGAATTTGATGAAGAACAAAAAACAAGTCCTCTTTCACAGTCGAAAAGCGAACTGATTTTACGATTCTTTATAGTTGAAGAAAAAGGAAAAGGAAAATGGAGGATTCTCGATCATCAGACGGCGGAAGTGAGAGGCGAAGTTCCGTCATTAGTAGGAGAGGGACGAACGGGACGTTGAACGTCATATTTACTGATCCGCAGATTCTCGATTGCTATATTTGTTGCGAACCCTTGTCAATTCCTGTTTTCCAGTGTGAGAATGGGCATATTGCTTGCTCTAGCTGCTGCACCAAAGCTCAGAATAAATGCCCTAGCTGCACCTTAGCAATTGGCTACATACGTTGCAGGGCAATTGAGAAGGTTTTGGAATCAATCAAGTTACCATGTCAAAACGCAATATACGGATGCAAAACCGTGATGGGTTTGAACCTGATAAACGACCATGAGTCCTTATGCAGATATGAACCCTGCTCATGCCCTTTGGACAATTGCACCTTTGTTGGTTCAACAGAGCAGTTGGGCTTACACTTCACCAAAAAACACAAAAACTCAGCCAAAATCTTCTCATACAATACGAGGTTCACTATATGCTTGAACAATGGTGATACTCATCGTATCCTTAAAGCAGAGAATGATGGAGTTTTGTTCTTCCTATCTTACACATTTGAAATTTTTGGGAATGCTGTAACTATGAACCGGATTGGACCTTTGTCATCTGAGAAAAAGTTCTGTTATGAAATTAAAGCCAAAACACTGGGGAGTGTTCTTTCTTTACAATCAATAGCAAAGGAGATCCAAGGTTTGATAAAAGTTCCTCCTTCCAAGGGATCACTTTTGATTCCTAACGAGTACTTTGGATCTTCCACCCAGACTATGTTGGAGATTTGCATTTGGCCTGCACACTAAAGACAAAAACTGTGAATCAATAGCACGTTTGCTGATCTTCTTGGTTCATTGAACTTTGAATCTTTCTGGCTGCTTTTTTTTATCTTTTCAAAGGACTTGTGTCTACTTTTGTACATATTATCATATTTTGTCTTGGATAGATACCTAGGACATCTTTTTTATAATTTTGTATCTATTATCATTTTTCGTACACCTAAACCTTAAAAGAATTGTGTAAAAAATAAAAAATGTTAGTTTGACCTAGTTTTATCATTTTTCGTACATCTAAACCTTAAAAGAATTGTGTAAAAAATGTTAGTTTGACCTTGTTTTATAATCCTTTGTTTAGTTGCGTTAAAAAAA

Coding sequence (CDS)

ATGGAGGATTCTCGATCATCAGACGGCGGAAGTGAGAGGCGAAGTTCCGTCATTAGTAGGAGAGGGACGAACGGGACGTTGAACGTCATATTTACTGATCCGCAGATTCTCGATTGCTATATTTGTTGCGAACCCTTGTCAATTCCTGTTTTCCAGTGTGAGAATGGGCATATTGCTTGCTCTAGCTGCTGCACCAAAGCTCAGAATAAATGCCCTAGCTGCACCTTAGCAATTGGCTACATACGTTGCAGGGCAATTGAGAAGGTTTTGGAATCAATCAAGTTACCATGTCAAAACGCAATATACGGATGCAAAACCGTGATGGGTTTGAACCTGATAAACGACCATGAGTCCTTATGCAGATATGAACCCTGCTCATGCCCTTTGGACAATTGCACCTTTGTTGGTTCAACAGAGCAGTTGGGCTTACACTTCACCAAAAAACACAAAAACTCAGCCAAAATCTTCTCATACAATACGAGGTTCACTATATGCTTGAACAATGGTGATACTCATCGTATCCTTAAAGCAGAGAATGATGGAGTTTTGTTCTTCCTATCTTACACATTTGAAATTTTTGGGAATGCTGTAACTATGAACCGGATTGGACCTTTGTCATCTGAGAAAAAGTTCTGTTATGAAATTAAAGCCAAAACACTGGGGAGTGTTCTTTCTTTACAATCAATAGCAAAGGAGATCCAAGGTTTGATAAAAGTTCCTCCTTCCAAGGGATCACTTTTGATTCCTAACGAGTACTTTGGATCTTCCACCCAGACTATGTTGGAGATTTGCATTTGGCCTGCACACTAA

Protein sequence

MEDSRSSDGGSERRSSVISRRGTNGTLNVIFTDPQILDCYICCEPLSIPVFQCENGHIACSSCCTKAQNKCPSCTLAIGYIRCRAIEKVLESIKLPCQNAIYGCKTVMGLNLINDHESLCRYEPCSCPLDNCTFVGSTEQLGLHFTKKHKNSAKIFSYNTRFTICLNNGDTHRILKAENDGVLFFLSYTFEIFGNAVTMNRIGPLSSEKKFCYEIKAKTLGSVLSLQSIAKEIQGLIKVPPSKGSLLIPNEYFGSSTQTMLEICIWPAH
Homology
[Close]
BLAST of CsGy3G017560 vs. NCBI nr
Match: XP_004140738.2 (PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 [Cucumis sativus] >KGN57437.1 hypothetical protein Csa_3G185660 [Cucumis sativus])

HSP 1 Score: 555.8 bits (1431), Expect = 7.9e-155
Identity = 267/269 (99.26%), Postives = 268/269 (99.63%), Query Frame = 0 

Query: 1   MEDSRSSDGGSERRSSVISRRGTNGTLNVIFTDPQILDCYICCEPLSIPVFQCENGHIAC 60
           MEDSRSSDGGSERRSSVISRRGTNGTLNVIFTDPQILDCYICCEPLSIPVFQCENGHIAC
Sbjct: 1   MEDSRSSDGGSERRSSVISRRGTNGTLNVIFTDPQILDCYICCEPLSIPVFQCENGHIAC 60

Query: 61  SSCCTKAQNKCPSCTLAIGYIRCRAIEKVLESIKLPCQNAIYGCKTVMGLNLINDHESLC 120
           SSCCTKAQNKCPSCTLAIGYIRCRAIEKVLESIKLPCQNAIYGCKTVMGLNLINDHESLC
Sbjct: 61  SSCCTKAQNKCPSCTLAIGYIRCRAIEKVLESIKLPCQNAIYGCKTVMGLNLINDHESLC 120

Query: 121 RYEPCSCPLDNCTFVGSTEQLGLHFTKKHKNSAKIFSYNTRFTICLNNGDTHRILKAEND 180
           RYEPCSCPLDNCTFVGSTEQLGLHFTKKHK+SAKIFSYNTRFTICLNNGDTHRILKAEND
Sbjct: 121 RYEPCSCPLDNCTFVGSTEQLGLHFTKKHKDSAKIFSYNTRFTICLNNGDTHRILKAEND 180

Query: 181 GVLFFLSYTFEIFGNAVTMNRIGPLSSEKKFCYEIKAKTLGSVLSLQSIAKEIQGLIKVP 240
           GVLFFLSYTFEIFGNAVTMNRIGPLSSEKKFCYEIKAKTLGSVLSLQSIAKEIQGLIKVP
Sbjct: 181 GVLFFLSYTFEIFGNAVTMNRIGPLSSEKKFCYEIKAKTLGSVLSLQSIAKEIQGLIKVP 240

Query: 241 PSKGSLLIPNEYFGSSTQTMLEICIWPAH 270
           PSKGSLLIPNEYFGSSTQTMLEI IWPAH
Sbjct: 241 PSKGSLLIPNEYFGSSTQTMLEISIWPAH 269

[Close]
BLAST of CsGy3G017560 vs. NCBI nr
Match: XP_022143325.1 (E3 ubiquitin-protein ligase SINA-like 10 [Momordica charantia])

HSP 1 Score: 428.3 bits (1100), Expect = 1.9e-116
Identity = 202/269 (75.09%), Postives = 232/269 (86.25%), Query Frame = 0 

Query: 1   MEDSRSSDGGSERRSSVISRRGTNGTLNVIFTDPQILDCYICCEPLSIPVFQCENGHIAC 60
           M DSR+SDG   +RS V S RG    +NVIF+DPQ+LDCYICCEPLS PVFQCENGHIAC
Sbjct: 1   MADSRASDGERGKRSPV-SGRGKTEAMNVIFSDPQLLDCYICCEPLSAPVFQCENGHIAC 60

Query: 61  SSCCTKAQNKCPSCTLAIGYIRCRAIEKVLESIKLPCQNAIYGCKTVMGLNLINDHESLC 120
           SSCCTK QNKCPSC+L+IGYIRCRAIEKVLESIK+PC N+IYGCK  M LN  NDH SLC
Sbjct: 61  SSCCTKVQNKCPSCSLSIGYIRCRAIEKVLESIKIPCHNSIYGCKMTMTLNERNDHGSLC 120

Query: 121 RYEPCSCPLDNCTFVGSTEQLGLHFTKKHKNSAKIFSYNTRFTICLNNGDTHRILKAEND 180
            YEPCSCP+ +C FVGS+E+L  HF+KKHKNSAK FSYN+RFT+CLN+GD++RIL+AE D
Sbjct: 121 TYEPCSCPVSDCLFVGSSEKLCSHFSKKHKNSAKSFSYNSRFTLCLNSGDSYRILQAEKD 180

Query: 181 GVLFFLSYTFEIFGNAVTMNRIGPLSSEKKFCYEIKAKTLGSVLSLQSIAKEIQGLIKVP 240
           G LFFLS+TFEIFGNAVT++RIGP SSEKKFCYEIKAKT GS+L LQSIAKEIQG ++VP
Sbjct: 181 GALFFLSFTFEIFGNAVTVSRIGPSSSEKKFCYEIKAKTQGSILCLQSIAKEIQGRVEVP 240

Query: 241 PSKGSLLIPNEYFGSSTQTMLEICIWPAH 270
           PS  SLLIPNE+FGSS QT+LE  IWP++
Sbjct: 241 PSNRSLLIPNEFFGSSAQTILEFRIWPSY 268

[Close]
BLAST of CsGy3G017560 vs. NCBI nr
Match: XP_022997791.1 (E3 ubiquitin-protein ligase SINA-like 10 [Cucurbita maxima])

HSP 1 Score: 408.7 bits (1049), Expect = 1.6e-110
Identity = 193/269 (71.75%), Postives = 225/269 (83.64%), Query Frame = 0 

Query: 1   MEDSRSSDGGSERRSSVISRRGTNGTLNVIFTDPQILDCYICCEPLSIPVFQCENGHIAC 60
           M DSRSSDG  ERR SV   RG N  + VIFTDPQILDCYICCEPLS+PV+QCENGHI+C
Sbjct: 1   MADSRSSDGEKERRRSVNCSRGKNEAMKVIFTDPQILDCYICCEPLSVPVYQCENGHISC 60

Query: 61  SSCCTKAQNKCPSCTLAIGYIRCRAIEKVLESIKLPCQNAIYGCKTVMGLNLINDHESLC 120
           SSCC+K  NKCPSC+LAIGYIRCRAIEKVLESIK+PCQN+ YGCK  M LN IN+HE+ C
Sbjct: 61  SSCCSKVHNKCPSCSLAIGYIRCRAIEKVLESIKIPCQNSKYGCKITMNLNQINEHETSC 120

Query: 121 RYEPCSCPLDNCTFVGSTEQLGLHFTKKHKNSAKIFSYNTRFTICLNNGDTHRILKAEND 180
            YEPCSCP+ +C++V S E LG HF K+H++SAK F YN+RFTICLN+GD +RI +AEND
Sbjct: 121 PYEPCSCPISDCSYVDSAEHLGSHFRKRHQDSAKSFLYNSRFTICLNSGDRYRIFQAEND 180

Query: 181 GVLFFLSYTFEIFGNAVTMNRIGPLSSEKKFCYEIKAKTLGSVLSLQSIAKEIQGLIKVP 240
             LF LSY+FEIFGNAVT++RIG   SEKKFCY+IKAK+ GSVLSLQS+AKEIQ   + P
Sbjct: 181 DALFVLSYSFEIFGNAVTLSRIGSPLSEKKFCYDIKAKSQGSVLSLQSVAKEIQRWTEDP 240

Query: 241 PSKGSLLIPNEYFGSST-QTMLEICIWPA 269
           P KGSLLIPNE+FGSS+ QT+LEI IWP+
Sbjct: 241 PFKGSLLIPNEFFGSSSAQTILEIRIWPS 269

[Close]
BLAST of CsGy3G017560 vs. NCBI nr
Match: XP_022949045.1 (uncharacterized protein LOC111452508 [Cucurbita moschata])

HSP 1 Score: 406.4 bits (1043), Expect = 7.7e-110
Identity = 192/269 (71.38%), Postives = 226/269 (84.01%), Query Frame = 0 

Query: 1   MEDSRSSDGGSERRSSVISRRGTNGTLNVIFTDPQILDCYICCEPLSIPVFQCENGHIAC 60
           M  SRSSDG  ERRSS  S R  N T+ VI TDPQ+LDCYICCEPLS+PV+QCENGHI+C
Sbjct: 271 MAGSRSSDGEKERRSSANSSRRKNETMKVILTDPQVLDCYICCEPLSVPVYQCENGHISC 330

Query: 61  SSCCTKAQNKCPSCTLAIGYIRCRAIEKVLESIKLPCQNAIYGCKTVMGLNLINDHESLC 120
           SSCC+K QNKCPSC+LAIGY+RCRAIEKVLESIK+PCQN+ YGCKT   LN IN+HE+LC
Sbjct: 331 SSCCSKVQNKCPSCSLAIGYMRCRAIEKVLESIKMPCQNSRYGCKTTTNLNQINEHETLC 390

Query: 121 RYEPCSCPLDNCTFVGSTEQLGLHFTKKHKNSAKIFSYNTRFTICLNNGDTHRILKAEND 180
            Y+PCSCPL +C++V S E L  HF K+H++SAK  SYN+RFTICLN+ D + I +AEND
Sbjct: 391 PYQPCSCPLSDCSYVDSAEYLSSHFRKRHQDSAKSISYNSRFTICLNSDDKYCIFQAEND 450

Query: 181 GVLFFLSYTFEIFGNAVTMNRIGPLSSEKKFCYEIKAKTLGSVLSLQSIAKEIQGLIKVP 240
           GVLF LSY+FE FG+AVT+NRIGP SSEKKFCY+IKAK+ GSVLSL S+AKEIQ   + P
Sbjct: 451 GVLFVLSYSFETFGDAVTLNRIGPRSSEKKFCYDIKAKSQGSVLSLLSVAKEIQRWTEDP 510

Query: 241 PSKGSLLIPNEYFGSST-QTMLEICIWPA 269
           PSKGSLLIPNE+FGSS+ QT+LEI IWP+
Sbjct: 511 PSKGSLLIPNEFFGSSSAQTILEIRIWPS 539

[Close]
BLAST of CsGy3G017560 vs. NCBI nr
Match: XP_022997790.1 (E3 ubiquitin-protein ligase SINA-like 10 isoform X2 [Cucurbita maxima])

HSP 1 Score: 400.2 bits (1027), Expect = 5.5e-108
Identity = 189/269 (70.26%), Postives = 224/269 (83.27%), Query Frame = 0 

Query: 1   MEDSRSSDGGSERRSSVISRRGTNGTLNVIFTDPQILDCYICCEPLSIPVFQCENGHIAC 60
           M  SRSSDG  ERRSSV S R  N T+ VI TDPQ+LDCYICC PLS+PV+QCENGHI+C
Sbjct: 1   MAGSRSSDGEKERRSSVNSSRWKNETMKVILTDPQVLDCYICCVPLSVPVYQCENGHISC 60

Query: 61  SSCCTKAQNKCPSCTLAIGYIRCRAIEKVLESIKLPCQNAIYGCKTVMGLNLINDHESLC 120
           SSCC+K  NKCPSC+L IGY+RCRAIEKVLESIK+PCQN+ YGCKT   LN IN+HE+LC
Sbjct: 61  SSCCSKVHNKCPSCSLPIGYMRCRAIEKVLESIKMPCQNSRYGCKTTTNLNQINEHETLC 120

Query: 121 RYEPCSCPLDNCTFVGSTEQLGLHFTKKHKNSAKIFSYNTRFTICLNNGDTHRILKAEND 180
            Y+PCSCPL +C++V S E LG HF K+H++SAK  SYN+RFTICLN+ D + I +AEND
Sbjct: 121 PYQPCSCPLSDCSYVDSAEHLGSHFRKRHQDSAKSISYNSRFTICLNSDDKYCIFQAEND 180

Query: 181 GVLFFLSYTFEIFGNAVTMNRIGPLSSEKKFCYEIKAKTLGSVLSLQSIAKEIQGLIKVP 240
           GVLF LSY+FE FG+AVT+ RIGP SSEKKFCY+IKAK+ G+VLSL S+AKEIQ   + P
Sbjct: 181 GVLFVLSYSFETFGDAVTLKRIGPRSSEKKFCYDIKAKSHGNVLSLLSVAKEIQRWTEDP 240

Query: 241 PSKGSLLIPNEYFGSST-QTMLEICIWPA 269
           PSKGSLLIPNE+FGSS+ QT+LEI IWP+
Sbjct: 241 PSKGSLLIPNEFFGSSSAQTILEIRIWPS 269

[Close]
BLAST of CsGy3G017560 vs. TAIR10
Match: AT5G37930.1 (Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 202.2 bits (513), Expect = 4.0e-52
Identity = 101/256 (39.45%), Postives = 145/256 (56.64%), Query Frame = 0 

Query: 15  SSVISRRGTNGTLNVIFTDPQILDCYICCEPLSIPVFQCENGHIACSSCCTKAQNKCPSC 74
           +S  S    +  L+V   DP +LDC ICCEPL IP+FQC+NGH+AC+ CCTK +N+CPSC
Sbjct: 89  NSQSSSSSKDSPLSVTLLDPDVLDCPICCEPLKIPIFQCDNGHLACTLCCTKVRNRCPSC 148

Query: 75  TLAIGYIRCRAIEKVLESIKLPCQNAIYGCKTVMGLNLINDHESLCRYEPCSCPLDNCTF 134
           TL IGY+RCRA+EKV+E+ ++ C NA YGCK          HE +C + PCSCP+ +C +
Sbjct: 149 TLPIGYVRCRAMEKVIEASRVSCLNAKYGCKESTSYGNRFSHEQVCVFTPCSCPILDCHY 208

Query: 135 VGSTEQLGLHFTKKHKNSAKIFSYNTRFTICLNNGDTHRILKAENDGVLFFLSYTFEIFG 194
            G  + L  H   +HK+    F +NTR TI L+      IL+ ENDG +  +     +  
Sbjct: 209 TGYYKDLNNHVRAEHKDDLISFVWNTRLTISLDLNKKTTILQEENDGHVIVVQVFRALHA 268

Query: 195 NAVTMNRIGPLS-SEKKFCYEIKAKTLGSVLSLQSIAKEIQGLIKVPPSKGSLLIPNEYF 254
             V+++ I PL+    +    +   T+ S+L    + K IQ +    P  G +LIP+  F
Sbjct: 269 VYVSVSCIAPLTPGVGRLSCRLAKITVDSLLKQGFMVKNIQKVTNEHPEDGFMLIPSYLF 328

Query: 255 GSSTQTMLEICIWPAH 270
             +    L + IW  H
Sbjct: 329 SGNDN--LNLQIWIGH 342

[Close]
BLAST of CsGy3G017560 vs. TAIR10
Match: AT5G37870.1 (Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 161.0 bits (406), Expect = 1.0e-39
Identity = 93/257 (36.19%), Postives = 141/257 (54.86%), Query Frame = 0 

Query: 6   SSDGGSERR-----SSVISRRGTNGTLNVIFTDPQILDCYICCEPLSIPVFQCENGHIAC 65
           S   GS++R     SS   R+  + T + + TD  ILDC IC + L IPVFQC NGH+AC
Sbjct: 7   SERNGSQKRHCSSISSDDGRKRVDKTRSAMLTDLDILDCPICYQALKIPVFQCGNGHLAC 66

Query: 66  SSCCTKAQNKCPSCTLAIGYIRCRAIEKVLESIKLPCQNAIYGCKTVMGLNLINDHESLC 125
           SSCC K +NKCP+C L +G+IRCRA+E+VLES+ +PC+ A  GC   +     + HE +C
Sbjct: 67  SSCCPKLRNKCPACALPVGHIRCRAMERVLESVLVPCRYADLGCTKTIYYGRESTHEKIC 126

Query: 126 RYEPCSCPLDNCTFVGSTEQLGLHFTKKHKNSAKIFSYN--TRFTICLNNGDTHRILKAE 185
            + PCSCP+  C + GS + L  H+   H   +  +S+N  +     +   D   I +  
Sbjct: 127 NFSPCSCPVQGCNYTGSYKDLYEHYDLTHSTGSTAYSFNGVSYIAAMMFISDKILIERVY 186

Query: 186 NDGVLFFLSYTFEIFGNAVTMNRIGPLSSE-KKFCYEIKAKTL-GSVLSLQSIAKEIQGL 245
              +LF +    E  G  V+++ I P + E  +F Y +   T  G  ++ QS   +++ +
Sbjct: 187 EKKLLFVVQCFEEPCGVYVSVSCIAPSAPEVGEFSYGLLYTTWEGVTMTYQS--PKVKKV 246

Query: 246 IKVP---PSKGSLLIPN 251
           +KV    P    +LIP+
Sbjct: 247 LKVSSQRPKDSFMLIPH 261

[Close]
BLAST of CsGy3G017560 vs. TAIR10
Match: AT5G37910.1 (Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 151.0 bits (380), Expect = 1.1e-36
Identity = 83/230 (36.09%), Postives = 120/230 (52.17%), Query Frame = 0 

Query: 29  VIFTDPQILDCYICCEPLSIPVFQCENGHIACSSCCTKAQNKCPSCTLAIGYIRCRAIEK 88
           ++  D  ILDC ICCE L+ P+FQC+NGH+AC SCC K  NKCP+CTL +G+ R RA+E 
Sbjct: 28  IVLLDLDILDCPICCEALTSPIFQCDNGHLACGSCCPKLSNKCPACTLPVGHSRSRAMES 87

Query: 89  VLESIKLPCQNAIYGCKTVMGLNLINDHESLCRYEPCSCPLDNCTFVGSTEQLGLHFTKK 148
           VLESI +PC N  +GC         + HE  C +  CSCP   C + GS + L  H+   
Sbjct: 88  VLESILIPCPNVRFGCTKSFFYGKESAHEKECIFSQCSCPSSVCDYTGSYKDLYAHYKLT 147

Query: 149 HKN----SAKIFSYNTRFTICLNNGDTHRILKAENDGVLFFLSYTFEIFGNAVTMNRIGP 208
           H      + K F     FT  +   D   I +     +L  +    E  G  VT++ I P
Sbjct: 148 HSTNIFWNIKRFRCANFFTTSMLISDKILIKRVHEKKLLLAVQCFREPCGVYVTVSFIAP 207

Query: 209 LSSE-KKFCYEIKAKTLGSVLSLQSIAKEIQGLIKV---PPSKGSLLIPN 251
            + E  +F Y++     G  ++ +S   E++ + KV    P +  +LIP+
Sbjct: 208 SAPEVGEFSYQLSYNVDGHTVTYES--PEVKRVCKVSIETPQENFMLIPH 255

[Close]
BLAST of CsGy3G017560 vs. TAIR10
Match: AT5G37890.1 (Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 150.6 bits (379), Expect = 1.4e-36
Identity = 83/229 (36.24%), Postives = 121/229 (52.84%), Query Frame = 0 

Query: 28  NVIFTDPQILDCYICCEPLSIPVFQCENGHIACSSCCTKAQNKCPSCTLAIGYIRCRAIE 87
           + +  D +ILDC IC E  +IP+FQC+NGH+ACSSCC K  NKCP+CT  +G+ RCRA+E
Sbjct: 40  STMLMDLEILDCPICYEAFTIPIFQCDNGHLACSSCCPKLNNKCPACTSPVGHNRCRAME 99

Query: 88  KVLESIKLPCQNAIYGCKTVMGLNLINDHESLCRYEPCSCPLDNCTFVGSTEQLGLHFTK 147
            VLESI +PC NA  GCK  +       HE  C +  C+CP  +C +  S + L  H+  
Sbjct: 100 SVLESILIPCPNAKLGCKKNVSYGKELTHEKECMFSHCACPALDCNYTSSYKDLYTHYRI 159

Query: 148 KHK--NSAKIFSYNTRFTICLNNGDTHRILKAENDGVLFFLSYTFEIFGNAVTMNRIGPL 207
            H   N    F  +   ++ +N      I        LF +    E +G  VT++ I P 
Sbjct: 160 THMEINQINTFICDIPLSVRMNISKKILIRTEHLTNHLFAVQCFREPYGVYVTVSCIAPS 219

Query: 208 SSE-KKFCYEIKAKTLGSVLSLQSIAKEIQGLIKV---PPSKGSLLIPN 251
           S E  ++ Y +     G  +  QS   E++ ++K+    P +  +LIPN
Sbjct: 220 SPELSQYSYALSYTVDGHTVIYQS--PEVKRVLKLSFQTPQENFMLIPN 266

[Close]
BLAST of CsGy3G017560 vs. TAIR10
Match: AT1G66650.1 (Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 150.2 bits (378), Expect = 1.8e-36
Identity = 90/256 (35.16%), Postives = 131/256 (51.17%), Query Frame = 0 

Query: 20  RRGTNGTLNVIFTDPQILDCYICCEPLSIPVFQCENGHIACSSCCTKAQNKCPSCTLAIG 79
           +R  +   +V   +  +L+C  C +PL  P+FQC NGH+AC  CC K + +C  C L IG
Sbjct: 67  KRRVSSPKSVTLPNSNVLECPNCFDPLKKPIFQCNNGHLACFLCCIKLKKRCSFCKLPIG 126

Query: 80  YIRCRAIEKVLESIKLPCQNAIYGCK--TVMGLNLINDHESLCRYEPCSCPLDNCTFVGS 139
            +RCRA+EKV+++  + C NAIYGCK  T  G N +  HE +C + PCSCP+ +C ++G 
Sbjct: 127 DVRCRAMEKVIKAGLVSCSNAIYGCKQSTTYG-NQLQSHEKVCVFAPCSCPIKDCNYIGF 186

Query: 140 TEQLGLHFTKKHKNS-----AKIFSYNTRFTICLNNGDTHRILKAENDGVLFFLSYTFEI 199
            + L  HF   HK S     + +F     F + L++ D   I   E  G LF +      
Sbjct: 187 YKDLINHFRATHKVSPGDINSFVFDRPVIFGLDLDSSDKMVIFVEEKQGNLFVVQGFIGS 246

Query: 200 FGNAVTMNRIGPLSSE-KKFCYEIKAKTLGSVLSLQSIAKEIQGL--IKVPPSKGSLLIP 259
            G   T++ I P+  E +KF   +      S L L    K IQ L   +  P +  LLIP
Sbjct: 247 HGVYATVSHIAPMVPEVRKFSCSLARLRPYSTLRLGLEVKNIQKLRSQEEQPQEDFLLIP 306

Query: 260 NEYFGSSTQTMLEICI 266
           + Y  +     +EI I
Sbjct: 307 S-YMVNGDHMKMEISI 320

[Close]
BLAST of CsGy3G017560 vs. Swiss-Prot
Match: sp|Q84K34|SIL10_ARATH (E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana OX=3702 GN=At5g37930 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 7.2e-51
Identity = 101/256 (39.45%), Postives = 145/256 (56.64%), Query Frame = 0 

Query: 15  SSVISRRGTNGTLNVIFTDPQILDCYICCEPLSIPVFQCENGHIACSSCCTKAQNKCPSC 74
           +S  S    +  L+V   DP +LDC ICCEPL IP+FQC+NGH+AC+ CCTK +N+CPSC
Sbjct: 89  NSQSSSSSKDSPLSVTLLDPDVLDCPICCEPLKIPIFQCDNGHLACTLCCTKVRNRCPSC 148

Query: 75  TLAIGYIRCRAIEKVLESIKLPCQNAIYGCKTVMGLNLINDHESLCRYEPCSCPLDNCTF 134
           TL IGY+RCRA+EKV+E+ ++ C NA YGCK          HE +C + PCSCP+ +C +
Sbjct: 149 TLPIGYVRCRAMEKVIEASRVSCLNAKYGCKESTSYGNRFSHEQVCVFTPCSCPILDCHY 208

Query: 135 VGSTEQLGLHFTKKHKNSAKIFSYNTRFTICLNNGDTHRILKAENDGVLFFLSYTFEIFG 194
            G  + L  H   +HK+    F +NTR TI L+      IL+ ENDG +  +     +  
Sbjct: 209 TGYYKDLNNHVRAEHKDDLISFVWNTRLTISLDLNKKTTILQEENDGHVIVVQVFRALHA 268

Query: 195 NAVTMNRIGPLS-SEKKFCYEIKAKTLGSVLSLQSIAKEIQGLIKVPPSKGSLLIPNEYF 254
             V+++ I PL+    +    +   T+ S+L    + K IQ +    P  G +LIP+  F
Sbjct: 269 VYVSVSCIAPLTPGVGRLSCRLAKITVDSLLKQGFMVKNIQKVTNEHPEDGFMLIPSYLF 328

Query: 255 GSSTQTMLEICIWPAH 270
             +    L + IW  H
Sbjct: 329 SGNDN--LNLQIWIGH 342

[Close]
BLAST of CsGy3G017560 vs. Swiss-Prot
Match: sp|Q9FKD9|SINL6_ARATH (Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis thaliana OX=3702 GN=At5g37870 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.8e-38
Identity = 93/257 (36.19%), Postives = 141/257 (54.86%), Query Frame = 0 

Query: 6   SSDGGSERR-----SSVISRRGTNGTLNVIFTDPQILDCYICCEPLSIPVFQCENGHIAC 65
           S   GS++R     SS   R+  + T + + TD  ILDC IC + L IPVFQC NGH+AC
Sbjct: 7   SERNGSQKRHCSSISSDDGRKRVDKTRSAMLTDLDILDCPICYQALKIPVFQCGNGHLAC 66

Query: 66  SSCCTKAQNKCPSCTLAIGYIRCRAIEKVLESIKLPCQNAIYGCKTVMGLNLINDHESLC 125
           SSCC K +NKCP+C L +G+IRCRA+E+VLES+ +PC+ A  GC   +     + HE +C
Sbjct: 67  SSCCPKLRNKCPACALPVGHIRCRAMERVLESVLVPCRYADLGCTKTIYYGRESTHEKIC 126

Query: 126 RYEPCSCPLDNCTFVGSTEQLGLHFTKKHKNSAKIFSYN--TRFTICLNNGDTHRILKAE 185
            + PCSCP+  C + GS + L  H+   H   +  +S+N  +     +   D   I +  
Sbjct: 127 NFSPCSCPVQGCNYTGSYKDLYEHYDLTHSTGSTAYSFNGVSYIAAMMFISDKILIERVY 186

Query: 186 NDGVLFFLSYTFEIFGNAVTMNRIGPLSSE-KKFCYEIKAKTL-GSVLSLQSIAKEIQGL 245
              +LF +    E  G  V+++ I P + E  +F Y +   T  G  ++ QS   +++ +
Sbjct: 187 EKKLLFVVQCFEEPCGVYVSVSCIAPSAPEVGEFSYGLLYTTWEGVTMTYQS--PKVKKV 246

Query: 246 IKVP---PSKGSLLIPN 251
           +KV    P    +LIP+
Sbjct: 247 LKVSSQRPKDSFMLIPH 261

[Close]
BLAST of CsGy3G017560 vs. Swiss-Prot
Match: sp|Q9FKD5|SINL9_ARATH (Putative E3 ubiquitin-protein ligase SINA-like 9 OS=Arabidopsis thaliana OX=3702 GN=At5g37910 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.9e-35
Identity = 83/230 (36.09%), Postives = 120/230 (52.17%), Query Frame = 0 

Query: 29  VIFTDPQILDCYICCEPLSIPVFQCENGHIACSSCCTKAQNKCPSCTLAIGYIRCRAIEK 88
           ++  D  ILDC ICCE L+ P+FQC+NGH+AC SCC K  NKCP+CTL +G+ R RA+E 
Sbjct: 28  IVLLDLDILDCPICCEALTSPIFQCDNGHLACGSCCPKLSNKCPACTLPVGHSRSRAMES 87

Query: 89  VLESIKLPCQNAIYGCKTVMGLNLINDHESLCRYEPCSCPLDNCTFVGSTEQLGLHFTKK 148
           VLESI +PC N  +GC         + HE  C +  CSCP   C + GS + L  H+   
Sbjct: 88  VLESILIPCPNVRFGCTKSFFYGKESAHEKECIFSQCSCPSSVCDYTGSYKDLYAHYKLT 147

Query: 149 HKN----SAKIFSYNTRFTICLNNGDTHRILKAENDGVLFFLSYTFEIFGNAVTMNRIGP 208
           H      + K F     FT  +   D   I +     +L  +    E  G  VT++ I P
Sbjct: 148 HSTNIFWNIKRFRCANFFTTSMLISDKILIKRVHEKKLLLAVQCFREPCGVYVTVSFIAP 207

Query: 209 LSSE-KKFCYEIKAKTLGSVLSLQSIAKEIQGLIKV---PPSKGSLLIPN 251
            + E  +F Y++     G  ++ +S   E++ + KV    P +  +LIP+
Sbjct: 208 SAPEVGEFSYQLSYNVDGHTVTYES--PEVKRVCKVSIETPQENFMLIPH 255

[Close]
BLAST of CsGy3G017560 vs. Swiss-Prot
Match: sp|Q9FKD7|SINL7_ARATH (E3 ubiquitin-protein ligase SINA-like 7 OS=Arabidopsis thaliana OX=3702 GN=At5g37890 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.5e-35
Identity = 83/229 (36.24%), Postives = 121/229 (52.84%), Query Frame = 0 

Query: 28  NVIFTDPQILDCYICCEPLSIPVFQCENGHIACSSCCTKAQNKCPSCTLAIGYIRCRAIE 87
           + +  D +ILDC IC E  +IP+FQC+NGH+ACSSCC K  NKCP+CT  +G+ RCRA+E
Sbjct: 40  STMLMDLEILDCPICYEAFTIPIFQCDNGHLACSSCCPKLNNKCPACTSPVGHNRCRAME 99

Query: 88  KVLESIKLPCQNAIYGCKTVMGLNLINDHESLCRYEPCSCPLDNCTFVGSTEQLGLHFTK 147
            VLESI +PC NA  GCK  +       HE  C +  C+CP  +C +  S + L  H+  
Sbjct: 100 SVLESILIPCPNAKLGCKKNVSYGKELTHEKECMFSHCACPALDCNYTSSYKDLYTHYRI 159

Query: 148 KHK--NSAKIFSYNTRFTICLNNGDTHRILKAENDGVLFFLSYTFEIFGNAVTMNRIGPL 207
            H   N    F  +   ++ +N      I        LF +    E +G  VT++ I P 
Sbjct: 160 THMEINQINTFICDIPLSVRMNISKKILIRTEHLTNHLFAVQCFREPYGVYVTVSCIAPS 219

Query: 208 SSE-KKFCYEIKAKTLGSVLSLQSIAKEIQGLIKV---PPSKGSLLIPN 251
           S E  ++ Y +     G  +  QS   E++ ++K+    P +  +LIPN
Sbjct: 220 SPELSQYSYALSYTVDGHTVIYQS--PEVKRVLKLSFQTPQENFMLIPN 266

[Close]
BLAST of CsGy3G017560 vs. Swiss-Prot
Match: sp|Q9C9M0|SINL4_ARATH (E3 ubiquitin-protein ligase SINA-like 4 OS=Arabidopsis thaliana OX=3702 GN=At1g66650 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.3e-35
Identity = 90/256 (35.16%), Postives = 131/256 (51.17%), Query Frame = 0 

Query: 20  RRGTNGTLNVIFTDPQILDCYICCEPLSIPVFQCENGHIACSSCCTKAQNKCPSCTLAIG 79
           +R  +   +V   +  +L+C  C +PL  P+FQC NGH+AC  CC K + +C  C L IG
Sbjct: 67  KRRVSSPKSVTLPNSNVLECPNCFDPLKKPIFQCNNGHLACFLCCIKLKKRCSFCKLPIG 126

Query: 80  YIRCRAIEKVLESIKLPCQNAIYGCK--TVMGLNLINDHESLCRYEPCSCPLDNCTFVGS 139
            +RCRA+EKV+++  + C NAIYGCK  T  G N +  HE +C + PCSCP+ +C ++G 
Sbjct: 127 DVRCRAMEKVIKAGLVSCSNAIYGCKQSTTYG-NQLQSHEKVCVFAPCSCPIKDCNYIGF 186

Query: 140 TEQLGLHFTKKHKNS-----AKIFSYNTRFTICLNNGDTHRILKAENDGVLFFLSYTFEI 199
            + L  HF   HK S     + +F     F + L++ D   I   E  G LF +      
Sbjct: 187 YKDLINHFRATHKVSPGDINSFVFDRPVIFGLDLDSSDKMVIFVEEKQGNLFVVQGFIGS 246

Query: 200 FGNAVTMNRIGPLSSE-KKFCYEIKAKTLGSVLSLQSIAKEIQGL--IKVPPSKGSLLIP 259
            G   T++ I P+  E +KF   +      S L L    K IQ L   +  P +  LLIP
Sbjct: 247 HGVYATVSHIAPMVPEVRKFSCSLARLRPYSTLRLGLEVKNIQKLRSQEEQPQEDFLLIP 306

Query: 260 NEYFGSSTQTMLEICI 266
           + Y  +     +EI I
Sbjct: 307 S-YMVNGDHMKMEISI 320

[Close]
BLAST of CsGy3G017560 vs. TrEMBL
Match: tr|A0A0A0L9Z6|A0A0A0L9Z6_CUCSA (E3 ubiquitin-protein ligase OS=Cucumis sativus OX=3659 GN=Csa_3G185660 PE=3 SV=1)

HSP 1 Score: 555.8 bits (1431), Expect = 5.2e-155
Identity = 267/269 (99.26%), Postives = 268/269 (99.63%), Query Frame = 0 

Query: 1   MEDSRSSDGGSERRSSVISRRGTNGTLNVIFTDPQILDCYICCEPLSIPVFQCENGHIAC 60
           MEDSRSSDGGSERRSSVISRRGTNGTLNVIFTDPQILDCYICCEPLSIPVFQCENGHIAC
Sbjct: 1   MEDSRSSDGGSERRSSVISRRGTNGTLNVIFTDPQILDCYICCEPLSIPVFQCENGHIAC 60

Query: 61  SSCCTKAQNKCPSCTLAIGYIRCRAIEKVLESIKLPCQNAIYGCKTVMGLNLINDHESLC 120
           SSCCTKAQNKCPSCTLAIGYIRCRAIEKVLESIKLPCQNAIYGCKTVMGLNLINDHESLC
Sbjct: 61  SSCCTKAQNKCPSCTLAIGYIRCRAIEKVLESIKLPCQNAIYGCKTVMGLNLINDHESLC 120

Query: 121 RYEPCSCPLDNCTFVGSTEQLGLHFTKKHKNSAKIFSYNTRFTICLNNGDTHRILKAEND 180
           RYEPCSCPLDNCTFVGSTEQLGLHFTKKHK+SAKIFSYNTRFTICLNNGDTHRILKAEND
Sbjct: 121 RYEPCSCPLDNCTFVGSTEQLGLHFTKKHKDSAKIFSYNTRFTICLNNGDTHRILKAEND 180

Query: 181 GVLFFLSYTFEIFGNAVTMNRIGPLSSEKKFCYEIKAKTLGSVLSLQSIAKEIQGLIKVP 240
           GVLFFLSYTFEIFGNAVTMNRIGPLSSEKKFCYEIKAKTLGSVLSLQSIAKEIQGLIKVP
Sbjct: 181 GVLFFLSYTFEIFGNAVTMNRIGPLSSEKKFCYEIKAKTLGSVLSLQSIAKEIQGLIKVP 240

Query: 241 PSKGSLLIPNEYFGSSTQTMLEICIWPAH 270
           PSKGSLLIPNEYFGSSTQTMLEI IWPAH
Sbjct: 241 PSKGSLLIPNEYFGSSTQTMLEISIWPAH 269

[Close]
BLAST of CsGy3G017560 vs. TrEMBL
Match: tr|A0A1S3C4U1|A0A1S3C4U1_CUCME (E3 ubiquitin-protein ligase OS=Cucumis melo OX=3656 GN=LOC103496855 PE=3 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 8.1e-108
Identity = 188/219 (85.84%), Postives = 201/219 (91.78%), Query Frame = 0 

Query: 1   MEDSRSSDGGSERRSSVISRRGTNGTLNVIFTDPQILDCYICCEPLSIPVFQCENGHIAC 60
           M DS+SSDGGSERRSSVISRRGTNGT+NVIFTDPQILDCYIC EPLSIP+FQCEN HIAC
Sbjct: 1   MADSQSSDGGSERRSSVISRRGTNGTMNVIFTDPQILDCYICXEPLSIPIFQCENXHIAC 60

Query: 61  SSCCTKAQNKCPSCTLAIGYIRCRAIEKVLESIKLPCQNAIYGCKTVMGLNLINDHESLC 120
           SSCCTK QNKCPSC LAIGYIRCRAIEKVLESIKLPC+NAIY CKT M LNLIND E+LC
Sbjct: 61  SSCCTKVQNKCPSCILAIGYIRCRAIEKVLESIKLPCKNAIYRCKTAMDLNLINDQETLC 120

Query: 121 RYEPCSCPLDNCTFVGSTEQLGLHFTKKHKNSAKIFSYNTRFTICLNNGDTHRILKAEND 180
           RYEPCSCPLDNCTFVG  EQL LHF+++HKNSAK FSYNTRFTICLNNGDT+RILKAE+D
Sbjct: 121 RYEPCSCPLDNCTFVGLAEQLYLHFSRRHKNSAKHFSYNTRFTICLNNGDTYRILKAEDD 180

Query: 181 GVLFFLSYTFEIFGNAVTMNRIGPLSSEKKFCYEIKAKT 220
           GVLFFLSYTFEIFGNA+T+N IGPLSSEKKF Y+I   T
Sbjct: 181 GVLFFLSYTFEIFGNAITVNWIGPLSSEKKFSYKINENT 219

[Close]
BLAST of CsGy3G017560 vs. TrEMBL
Match: tr|A0A2R6RKR1|A0A2R6RKR1_ACTCH (E3 ubiquitin-protein ligase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc05900 PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 6.1e-71
Identity = 128/248 (51.61%), Postives = 167/248 (67.34%), Query Frame = 0 

Query: 19  SRRGTNGTLNVIFTDPQILDCYICCEPLSIPVFQCENGHIACSSCCTKAQNKCPSCTLAI 78
           S+   +G+++V  TDP +LDC IC EPLS PVFQCENGH+ACSSCC K +NKCPSC+  I
Sbjct: 91  SKDDRDGSISVTLTDPDVLDCPICLEPLSSPVFQCENGHVACSSCCIKLRNKCPSCSWPI 150

Query: 79  GYIRCRAIEKVLESIKLPCQNAIYGCKTVMGLNLINDHESLCRYEPCSCPLDNCTFVGST 138
           GY RCRAIEKV+ES+K+ C+N  YGCK  +  +  + HE  C + PCSCPL  CTF+GS+
Sbjct: 151 GYNRCRAIEKVIESVKISCENLKYGCKETVIYSKKHGHEKACTFAPCSCPLSACTFLGSS 210

Query: 139 EQLGLHFTKKHKNSAKIFSYNTRFTICLNNGDTHRILKAENDGVLFFLSYTFEIFGNAVT 198
            QL LHF+  H NS K F YN  F I L       ILK +++G +F L+  FEI GNAV 
Sbjct: 211 NQLSLHFSSTHPNSGKHFRYNCLFPINLEMRQKCLILKEQSEGKIFVLNNAFEIMGNAVN 270

Query: 199 MNRIGPLSSEKKFCYEIKAKTLGSVLSLQSIAKEIQGLIKVPPSKGSLLIPNEYFGSSTQ 258
           ++ IGP SS+  F Y++ A+  GS L LQS  K +   ++  P++  LL+PN +FGS  Q
Sbjct: 271 ISCIGPSSSKSSFSYDLIARVGGSSLKLQSFTKNVPRWVEHTPAERFLLVPNNFFGSCGQ 330

Query: 259 TMLEICIW 267
             LE+CIW
Sbjct: 331 LKLELCIW 338

[Close]
BLAST of CsGy3G017560 vs. TrEMBL
Match: tr|A0A2P4HMZ2|A0A2P4HMZ2_QUESU (E3 ubiquitin-protein ligase OS=Quercus suber OX=58331 GN=CFP56_61552 PE=3 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.7e-68
Identity = 125/242 (51.65%), Postives = 165/242 (68.18%), Query Frame = 0 

Query: 24  NGTLNVIFTDPQILDCYICCEPLSIPVFQCENGHIACSSCCTKAQNKCPSCTLAIGYIRC 83
           +G+++V  TDP++LDC IC E LS PVFQCENGHIACSSCC K +NKCPSC   IGY RC
Sbjct: 121 DGSISVTLTDPEVLDCSICLEHLSPPVFQCENGHIACSSCCNKLKNKCPSCFWPIGYNRC 180

Query: 84  RAIEKVLESIKLPCQNAIYGCKTVMGLNLINDHESLCRYEPCSCPLDNCTFVGSTEQLGL 143
           RAIEKVLE++K+PCQN+ YGCK V+  +  +DHE  C Y PCSCPL +C F+ S++Q+ +
Sbjct: 181 RAIEKVLEAVKIPCQNSKYGCKEVVSYSRKSDHEKTCIYAPCSCPLSHCKFIASSKQIYV 240

Query: 144 HFTKKHKNSAKIFSYNTRFTICLNNGDTHRILKAENDGVLFFLSYTFEIFGNAVTMNRIG 203
           HF+ KH NSA  F Y++ F + L   D   +L+ +++GVLF L+   +  GN V +N +G
Sbjct: 241 HFSSKHTNSAIGFKYDSNFFVSLTLTDKFLVLQEQSNGVLFVLNNCVDHRGNVVAINCVG 300

Query: 204 PLSSEKKFCYEIKAKTLGSVLSLQSIAKEIQGLIKVPPSKGSLLIPNEYFGSSTQTMLEI 263
           P S+   F Y +  KT GS L L+S  K  Q  +  PPS G LLIP ++FGS  Q  LE+
Sbjct: 301 PSSTTGGFSYGLAVKTQGSSLRLESFTKNSQHRVDSPPSTGFLLIPTDFFGSCGQLKLEV 360

Query: 264 CI 266
            I
Sbjct: 361 YI 362

[Close]
BLAST of CsGy3G017560 vs. TrEMBL
Match: tr|A0A1S3CD49|A0A1S3CD49_CUCME (E3 ubiquitin-protein ligase OS=Cucumis melo OX=3656 GN=LOC103499310 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.4e-67
Identity = 129/269 (47.96%), Postives = 170/269 (63.20%), Query Frame = 0 

Query: 1   MEDSRSSDGGSE---RRSSVISRRGTNGTLNVIFTDPQILDCYICCEPLSIPVFQCENGH 60
           +E+    DGG        S       NG++++   DP++LDC ICCEPLSIP+FQCENGH
Sbjct: 73  IEEHLREDGGKRALWSGKSCTKNAKPNGSVSMFLIDPEVLDCSICCEPLSIPIFQCENGH 132

Query: 61  IACSSCCTKAQNKCPSCTLAIGYIRCRAIEKVLESIKLPCQNAIYGCKTVMGLNLINDHE 120
           IACSSCC K +NKC +C+  IGY RCRA+EKVLESIKLPC+ + +GCK ++G    +DHE
Sbjct: 133 IACSSCCNKLKNKCATCSWPIGYNRCRAVEKVLESIKLPCKQSKFGCKEIIGYGNESDHE 192

Query: 121 SLCRYEPCSCPLDNCTFVGSTEQLGLHFTKKHKNSAKIFSYNTRFTICLNNGDTHRILKA 180
             C Y PC CP  +C F+ S +QL LHF+ KH NSA  F +++ FTICL   DT+ +L+ 
Sbjct: 193 KTCLYAPCLCPYSDCKFIASAKQLSLHFSNKHTNSATNFHFSSSFTICLKTNDTYHVLQ- 252

Query: 181 ENDGVLFFLSYTFEIFGNAVTMNRIGPLSSEKKFCYEIKAKTLGSVLSLQSIAKEIQGLI 240
           E DGVLF LS + E  G+ V +  + P S ++ F Y+++A+T    L LQS  K IQ   
Sbjct: 253 EQDGVLFILSNSSENLGSVVKICCLQPPSLKETFSYDLRAETQDLSLVLQSSMKNIQSSS 312

Query: 241 KVPPSKGSLLIPNEYFGSSTQTMLEICIW 267
               S   L+IP + F SS    L ICIW
Sbjct: 313 DCCHSTRFLMIPRDLFSSSGMIKLNICIW 340

The following BLAST results are available for this feature:
BLAST of CsGy3G017560 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004140738.27.9e-15599.26PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 [Cucumis sativus] >KGN57437.... [more]
XP_022143325.11.9e-11675.09E3 ubiquitin-protein ligase SINA-like 10 [Momordica charantia][more]
XP_022997791.11.6e-11071.75E3 ubiquitin-protein ligase SINA-like 10 [Cucurbita maxima][more]
XP_022949045.17.7e-11071.38uncharacterized protein LOC111452508 [Cucurbita moschata][more]
XP_022997790.15.5e-10870.26E3 ubiquitin-protein ligase SINA-like 10 isoform X2 [Cucurbita maxima][more]
BLAST of CsGy3G017560 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G37930.14.0e-5239.45Protein with RING/U-box and TRAF-like domains[more]
AT5G37870.11.0e-3936.19Protein with RING/U-box and TRAF-like domains[more]
AT5G37910.11.1e-3636.09Protein with RING/U-box and TRAF-like domains[more]
AT5G37890.11.4e-3636.24Protein with RING/U-box and TRAF-like domains[more]
AT1G66650.11.8e-3635.16Protein with RING/U-box and TRAF-like domains[more]
BLAST of CsGy3G017560 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q84K34|SIL10_ARATH7.2e-5139.45E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana OX=3702 GN=At5g... [more]
sp|Q9FKD9|SINL6_ARATH1.8e-3836.19Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis thaliana OX=3702... [more]
sp|Q9FKD5|SINL9_ARATH1.9e-3536.09Putative E3 ubiquitin-protein ligase SINA-like 9 OS=Arabidopsis thaliana OX=3702... [more]
sp|Q9FKD7|SINL7_ARATH2.5e-3536.24E3 ubiquitin-protein ligase SINA-like 7 OS=Arabidopsis thaliana OX=3702 GN=At5g3... [more]
sp|Q9C9M0|SINL4_ARATH3.3e-3535.16E3 ubiquitin-protein ligase SINA-like 4 OS=Arabidopsis thaliana OX=3702 GN=At1g6... [more]
BLAST of CsGy3G017560 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L9Z6|A0A0A0L9Z6_CUCSA5.2e-15599.26E3 ubiquitin-protein ligase OS=Cucumis sativus OX=3659 GN=Csa_3G185660 PE=3 SV=1[more]
tr|A0A1S3C4U1|A0A1S3C4U1_CUCME8.1e-10885.84E3 ubiquitin-protein ligase OS=Cucumis melo OX=3656 GN=LOC103496855 PE=3 SV=1[more]
tr|A0A2R6RKR1|A0A2R6RKR1_ACTCH6.1e-7151.61E3 ubiquitin-protein ligase OS=Actinidia chinensis var. chinensis OX=1590841 GN=... [more]
tr|A0A2P4HMZ2|A0A2P4HMZ2_QUESU1.7e-6851.65E3 ubiquitin-protein ligase OS=Quercus suber OX=58331 GN=CFP56_61552 PE=3 SV=1[more]
tr|A0A1S3CD49|A0A1S3CD49_CUCME2.4e-6747.96E3 ubiquitin-protein ligase OS=Cucumis melo OX=3656 GN=LOC103499310 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0007275multicellular organism development
GO:0006511ubiquitin-dependent protein catabolic process
Vocabulary: INTERPRO
TermDefinition
IPR008974TRAF-like
IPR013010Znf_SIAH
IPR004162SINA-like
IPR013083Znf_RING/FYVE/PHD
IPR0181217-in-absentia-prot_TRAF-dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007275 multicellular organism development
biological_process GO:0016567 protein ubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005634 nucleus
molecular_function GO:0016874 ligase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G017560.1CsGy3G017560.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018121Seven-in-absentia protein, TRAF-like domainPFAMPF03145Sinacoord: 81..234
e-value: 3.9E-19
score: 69.3
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 90..145
e-value: 2.8E-15
score: 58.4
NoneNo IPR availablePANTHERPTHR10315:SF43E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 1-RELATEDcoord: 17..266
IPR004162E3 ubiquitin-protein ligase SIN-likePANTHERPTHR10315E3 UBIQUITIN PROTEIN LIGASE SIAHcoord: 17..266
IPR013010Zinc finger, SIAH-typePROSITEPS51081ZF_SIAHcoord: 92..150
score: 13.264
IPR008974TRAF-likeSUPERFAMILYSSF49599TRAF domain-likecoord: 92..254