CmoCh01G003640 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh01G003640
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionE3 ubiquitin-protein ligase (6.3.2.-)
LocationCmo_Chr01 : 1769131 .. 1771542 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAACTTTTTTTTTTTTTCACGACGGAAAGACTTAGATGATCTGCGAAGTCTTCGTCCTCATGGTCTGACGAAGAGCAGAGACTAACTTGAAGAAGAACAAATGGCGGATTCTCGATCGTCGGACGGCGAAAAGGAGAGGCGGCGTTCTGTCAACTGTAGCAGAGGGAAGAACGAGGCGATGAAAGTCATATTCACTGATCCTCAAATTCTCGATTGCTATATTTGTTGCGAGCCCTTGTCCGTTCCTGTTTACCAGGTCCGATTAAGCTTTTTGATCGCGTGTATTTTGCTTGCAATTATCGTTATTATTTATCTGTTTGTCTCTGATGCTTTGTTCTTCTCGTCCTTTTTTTTTTTTTTTTTTTGTTGCAATTTTGACTACTGTAGTTCACTTAGTGTTTTTGCTGGAATTGACGATTTTGGAATCCTCCTTTCTATGAGGTTTTGATTTTTTTTTGTGTAAATCCACAGAAGTTATGGATTATGATAACAATTGAAGAAATATAGCGAAGTTTTAAATGGTTATTCATTGCGAACCTATCCAATGGTACGATGTTGTCTACTTTAAACATAAGCTCTCGTACTTTGTTTTTGGTTTTCCAAAAGGCCTCGTACCAACAGAAATAGTGTTACTTACCTGTAAAATCATGATTTTCCTCTTAATTAGCTAATCTAGACTACTCCTTTCAATAATCCTCGACAATCCTCCCATCGAACAAAGGACACCATAGAGTCTCCTCTGAGGCCTATAGAGCCATCGAACAACCTCTCTTTAATTGAGGCTGGACTCCTTTCTTTGGAGCCTCTAAACAAAATACACCTTTTGTTCGACACTTGAGTCACTTTTGACTACACTTTCGAAACTCACTTCTTTGTTCGACACTTGAGGATTCTATTGACATAGCTAAGTTAAGGGCATAACTCTTATATAATGTTAGGAATCACGAACCTCCACAATGATATGATTTTGTCCACTCTGAGCATAAGCTCTCTTGACTTTGCTTTTGGTTTCTCCAAAAAGCCTCGTGGAAAATCATGAAAATTTACTTATAACCTCATGATCTTACTTTTAATTAGCATAACGTGAGACTTTCAATCATCTTGAAAACAGTTATCAAAACATGTTTTGATTCAAATAATCTTTGAACATGGAGATTATTCTGGATATTACGGGGACAGAGTTGTTAAATGGATGGGATTGAAATGAAATCTCGACCTGGATTGCTTATCTTGTTACATTGTCTCGAGAAAATGTCAGAATCAAGTCGTGCTTGATATTCTTTTCACCTTTTATGCCTGACTTGGGGTTCAATCGTGTGGATTGTGGGATTTTCTTCATTGTTTACAAACATGAATTTGAAAGGGATGAACCTAGAAGAAAATAAGCTGATATTGGTGTATATAGTATATCTCATTTTGTTTTCTATGAGTCTTTTATTTCATAACATATACTCTGGTGTTGAGATGTTGGTTGTTGGATGAATTAGTGTGAGAACGGGCATATTTCTTGCTCTAGCTGCTGCTCCAAAGTTCACAATAAATGCCCAAGCTGCAGCTTGGCCATCGGCTACATACGTTGCAGAGCGATCGAGAAGGTTCTTGAATCAATCAAGATACCATGCCAAAACTCAACATATGGATGCAAAATCACAATGAATTTGAACCAGATAAACGAGCACGAGACATCGTGCCCATATGAGCCCTGTTCGTGCCCTATATCTGATTGCTCTTATGTTGATTCGGCAGAGCATTTGGGGTCACACTTCAGAAAAAGGCACCCAGACTCAGCCAAAAGCTTCTTATACAATTCAAGGTTCACAATATGCTTGAACAGTGGTGATAGATATCGTATCTTTCAAGCAGAGAACGATGATGCTGTGTTTGTCCTGTCTTACTCGTTTGAAATCTTTGGCAATGCGGTTACTTTGAGCCGGATTGGATCTCCGTTGTGTGAGAAGAAGTTTTGTTATGATATCAAAGCCAAATCACAGGGGAGTGTTCTTTCTTTGCAATCAGTGGCGAATGAGATCCGACGTTGGATTGAAGATCCTCCTTTCAAGGGATCGCTTCTGATTCCAAATGAGTTCTTCGGATCTTCTTCAGCCCAGACGATCTTGGAGATTCGCATTTGGCCTTCACGCTGAAGATAAACACTGGGGATCAACACAGGTGCACATACATTTTTTTTGAAACAAAGCTGAATTATTGTTTAAACTGAGTTAATCTTTGCATCTGTGTTTTCTTTGTTTTTTTGGGATGGACTTTGGTGCATACTTTTGTGCATATATATCTATATGGGTTTGTTGAACTTTTAATTTTGTATGGAATAGAACTAAGCTTGTGAATGTTTGTGAATTAAAAAAAAAAAAAAATGTTGAGTGAGTCTATGGCCGATATCGCTCAGTTGGTAG

mRNA sequence

AAAACTTTTTTTTTTTTTCACGACGGAAAGACTTAGATGATCTGCGAAGTCTTCGTCCTCATGGTCTGACGAAGAGCAGAGACTAACTTGAAGAAGAACAAATGGCGGATTCTCGATCGTCGGACGGCGAAAAGGAGAGGCGGCGTTCTGTCAACTGTAGCAGAGGGAAGAACGAGGCGATGAAAGTCATATTCACTGATCCTCAAATTCTCGATTGCTATATTTGTTGCGAGCCCTTGTCCGTTCCTGTTTACCAGTGTGAGAACGGGCATATTTCTTGCTCTAGCTGCTGCTCCAAAGTTCACAATAAATGCCCAAGCTGCAGCTTGGCCATCGGCTACATACGTTGCAGAGCGATCGAGAAGGTTCTTGAATCAATCAAGATACCATGCCAAAACTCAACATATGGATGCAAAATCACAATGAATTTGAACCAGATAAACGAGCACGAGACATCGTGCCCATATGAGCCCTGTTCGTGCCCTATATCTGATTGCTCTTATGTTGATTCGGCAGAGCATTTGGGGTCACACTTCAGAAAAAGGCACCCAGACTCAGCCAAAAGCTTCTTATACAATTCAAGGTTCACAATATGCTTGAACAGTGGTGATAGATATCGTATCTTTCAAGCAGAGAACGATGATGCTGTGTTTGTCCTGTCTTACTCGTTTGAAATCTTTGGCAATGCGGTTACTTTGAGCCGGATTGGATCTCCGTTGTGTGAGAAGAAGTTTTGTTATGATATCAAAGCCAAATCACAGGGGAGTGTTCTTTCTTTGCAATCAGTGGCGAATGAGATCCGACGTTGGATTGAAGATCCTCCTTTCAAGGGATCGCTTCTGATTCCAAATGAGTTCTTCGGATCTTCTTCAGCCCAGACGATCTTGGAGATTCGCATTTGGCCTTCACGCTGAAGATAAACACTGGGGATCAACACAGGTGCACATACATTTTTTTTGAAACAAAGCTGAATTATTGTTTAAACTGAGTTAATCTTTGCATCTGTGTTTTCTTTGTTTTTTTGGGATGGACTTTGGTGCATACTTTTGTGCATATATATCTATATGGGTTTGTTGAACTTTTAATTTTGTATGGAATAGAACTAAGCTTGTGAATGTTTGTGAATTAAAAAAAAAAAAAAATGTTGAGTGAGTCTATGGCCGATATCGCTCAGTTGGTAG

Coding sequence (CDS)

ATGGCGGATTCTCGATCGTCGGACGGCGAAAAGGAGAGGCGGCGTTCTGTCAACTGTAGCAGAGGGAAGAACGAGGCGATGAAAGTCATATTCACTGATCCTCAAATTCTCGATTGCTATATTTGTTGCGAGCCCTTGTCCGTTCCTGTTTACCAGTGTGAGAACGGGCATATTTCTTGCTCTAGCTGCTGCTCCAAAGTTCACAATAAATGCCCAAGCTGCAGCTTGGCCATCGGCTACATACGTTGCAGAGCGATCGAGAAGGTTCTTGAATCAATCAAGATACCATGCCAAAACTCAACATATGGATGCAAAATCACAATGAATTTGAACCAGATAAACGAGCACGAGACATCGTGCCCATATGAGCCCTGTTCGTGCCCTATATCTGATTGCTCTTATGTTGATTCGGCAGAGCATTTGGGGTCACACTTCAGAAAAAGGCACCCAGACTCAGCCAAAAGCTTCTTATACAATTCAAGGTTCACAATATGCTTGAACAGTGGTGATAGATATCGTATCTTTCAAGCAGAGAACGATGATGCTGTGTTTGTCCTGTCTTACTCGTTTGAAATCTTTGGCAATGCGGTTACTTTGAGCCGGATTGGATCTCCGTTGTGTGAGAAGAAGTTTTGTTATGATATCAAAGCCAAATCACAGGGGAGTGTTCTTTCTTTGCAATCAGTGGCGAATGAGATCCGACGTTGGATTGAAGATCCTCCTTTCAAGGGATCGCTTCTGATTCCAAATGAGTTCTTCGGATCTTCTTCAGCCCAGACGATCTTGGAGATTCGCATTTGGCCTTCACGCTGA
Homology
[Close]
BLAST of CmoCh01G003640 vs. Swiss-Prot
Match: SIL10_ARATH (E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana GN=At5g37930 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 3.0e-49
Identity = 109/280 (38.93%), Postives = 152/280 (54.29%), Query Frame = 1 

Query: 4   SRSSDGE---KERR-----RSVNCSRGKNEAMKVIFTDPQILDCYICCEPLSVPVYQCEN 63
           S  SD E   +ERR      S + S  K+  + V   DP +LDC ICCEPL +P++QC+N
Sbjct: 70  SDDSDREVVIEERRFGKFVNSQSSSSSKDSPLSVTLLDPDVLDCPICCEPLKIPIFQCDN 129

Query: 64  GHISCSSCCSKVHNKCPSCSLAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQINE 123
           GH++C+ CC+KV N+CPSC+L IGY+RCRA+EKV+E+ ++ C N+ YGCK + +      
Sbjct: 130 GHLACTLCCTKVRNRCPSCTLPIGYVRCRAMEKVIEASRVSCLNAKYGCKESTSYGNRFS 189

Query: 124 HETSCPYEPCSCPISDCSYVDSAEHLGSHFRKRHPDSAKSFLYNSRFTICLNSGDRYRIF 183
           HE  C + PCSCPI DC Y    + L +H R  H D   SF++N+R TI L+   +  I 
Sbjct: 190 HEQVCVFTPCSCPILDCHYTGYYKDLNNHVRAEHKDDLISFVWNTRLTISLDLNKKTTIL 249

Query: 184 QAENDDAVFVLSYSFEIFGNAVTLS-------RIGSPLCE-KKFCYDIKAKSQGSVLSLQ 243
           Q END  V V+     +    V++S        +G   C   K   D   K    V ++Q
Sbjct: 250 QEENDGHVIVVQVFRALHAVYVSVSCIAPLTPGVGRLSCRLAKITVDSLLKQGFMVKNIQ 309

Query: 244 SVANEIRRWIEDPPFKGSLLIPNEFFGSSSAQTILEIRIW 268
            V NE        P  G +LIP+  F   S    L ++IW
Sbjct: 310 KVTNE-------HPEDGFMLIPSYLF---SGNDNLNLQIW 339

[Close]
BLAST of CmoCh01G003640 vs. Swiss-Prot
Match: SINL7_ARATH (E3 ubiquitin-protein ligase SINA-like 7 OS=Arabidopsis thaliana GN=At5g37890 PE=2 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 7.7e-37
Identity = 87/263 (33.08%), Postives = 143/263 (54.37%), Query Frame = 1 

Query: 12  ERRRSVNCSRGKNEAMK--VIFTDPQILDCYICCEPLSVPVYQCENGHISCSSCCSKVHN 71
           ++R+  +    K +A K   +  D +ILDC IC E  ++P++QC+NGH++CSSCC K++N
Sbjct: 22  QKRQLSSSDAAKRDAKKRSTMLMDLEILDCPICYEAFTIPIFQCDNGHLACSSCCPKLNN 81

Query: 72  KCPSCSLAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSCPYEPCSCPI 131
           KCP+C+  +G+ RCRA+E VLESI IPC N+  GCK  ++  +   HE  C +  C+CP 
Sbjct: 82  KCPACTSPVGHNRCRAMESVLESILIPCPNAKLGCKKNVSYGKELTHEKECMFSHCACPA 141

Query: 132 SDCSYVDSAEHLGSHFRKRHPD--SAKSFLYNSRFTICLNSGDRYRIFQAENDDAVFVLS 191
            DC+Y  S + L +H+R  H +     +F+ +   ++ +N   +  I      + +F + 
Sbjct: 142 LDCNYTSSYKDLYTHYRITHMEINQINTFICDIPLSVRMNISKKILIRTEHLTNHLFAVQ 201

Query: 192 YSFEIFGNAVTLSRIGSPLCE-KKFCYDIKAKSQGSVLSLQSVANEIRRWIE---DPPFK 251
              E +G  VT+S I     E  ++ Y +     G  +  QS   E++R ++     P +
Sbjct: 202 CFREPYGVYVTVSCIAPSSPELSQYSYALSYTVDGHTVIYQS--PEVKRVLKLSFQTPQE 261

Query: 252 GSLLIPNEFFGSSSAQTILEIRI 267
             +LIPN          +LE+RI
Sbjct: 262 NFMLIPNSLLRGD----VLEMRI 278

[Close]
BLAST of CmoCh01G003640 vs. Swiss-Prot
Match: SINL6_ARATH (Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis thaliana GN=At5g37870 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.5e-35
Identity = 84/255 (32.94%), Postives = 136/255 (53.33%), Query Frame = 1 

Query: 4   SRSSDGEKERRRSVNCSRGKNEAMKV---IFTDPQILDCYICCEPLSVPVYQCENGHISC 63
           S  +  +K    S++   G+    K    + TD  ILDC IC + L +PV+QC NGH++C
Sbjct: 7   SERNGSQKRHCSSISSDDGRKRVDKTRSAMLTDLDILDCPICYQALKIPVFQCGNGHLAC 66

Query: 64  SSCCSKVHNKCPSCSLAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSC 123
           SSCC K+ NKCP+C+L +G+IRCRA+E+VLES+ +PC+ +  GC  T+   + + HE  C
Sbjct: 67  SSCCPKLRNKCPACALPVGHIRCRAMERVLESVLVPCRYADLGCTKTIYYGRESTHEKIC 126

Query: 124 PYEPCSCPISDCSYVDSAEHLGSHFRKRHPDSAKSFLYN--SRFTICLNSGDRYRIFQAE 183
            + PCSCP+  C+Y  S + L  H+   H   + ++ +N  S     +   D+  I +  
Sbjct: 127 NFSPCSCPVQGCNYTGSYKDLYEHYDLTHSTGSTAYSFNGVSYIAAMMFISDKILIERVY 186

Query: 184 NDDAVFVLSYSFEIFGNAVTLSRIGSPLCE-KKFCYDIKAKS-QGSVLSLQS-VANEIRR 243
               +FV+    E  G  V++S I     E  +F Y +   + +G  ++ QS    ++ +
Sbjct: 187 EKKLLFVVQCFEEPCGVYVSVSCIAPSAPEVGEFSYGLLYTTWEGVTMTYQSPKVKKVLK 246

Query: 244 WIEDPPFKGSLLIPN 251
                P    +LIP+
Sbjct: 247 VSSQRPKDSFMLIPH 261

[Close]
BLAST of CmoCh01G003640 vs. Swiss-Prot
Match: SIL11_ARATH (E3 ubiquitin-protein ligase SINA-like 11 OS=Arabidopsis thaliana GN=At5g62800 PE=2 SV=2)

HSP 1 Score: 150.6 bits (379), Expect = 2.5e-35
Identity = 90/270 (33.33%), Postives = 135/270 (50.00%), Query Frame = 1 

Query: 1   MADSRSSDGEKERRRSVNCSRGK----NEAMKVIFTDPQILDCYICCEPLSVPVYQCENG 60
           M DS S    +  +R  +  + K    NE       D  +LDC +C EPL++P +QC++G
Sbjct: 1   MEDSNSHPQNQTSKRKSSHPQKKQRMENETRSAKLLDLDVLDCPVCFEPLTIPTFQCDDG 60

Query: 61  HISCSSCCSKVHNKCPS--CSLAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQIN 120
           HI C+ C +KV NKCP   C L IG  RC A+E+VLES  +PCQN+ +GC  +++  +++
Sbjct: 61  HIVCNFCFAKVSNKCPGPGCDLPIGNKRCFAMERVLESAFVPCQNTEFGCTKSVSYEKVS 120

Query: 121 EHETSCPYEPCSCPISDCSYVDSAEHLGSHFRKRHPDSAKSFLYNSRFT----------I 180
            HE  C Y  CSCP  +C+Y  S   +  HF +RH       LYNS             +
Sbjct: 121 SHEKECNYSQCSCPNLECNYTGSYNIIYGHFMRRH-------LYNSTIVSSKWGYSTVDV 180

Query: 181 CLNSGDRYRIFQAENDDAVFVLSYSFEIFGNAVTLSRIGSPLCE-KKFCYDIKAKSQGSV 240
            +N  ++  +        +FV+    E  G  VT+ RI  P  E KKF Y +     G  
Sbjct: 181 LINIKEKVSVLWESRQKLLFVVQCFKERHGVYVTVRRIAPPASEFKKFSYRLSYSIDGHN 240

Query: 241 LSLQSVANEIRRWIE---DPPFKGSLLIPN 251
           ++ +S   E++R +E     P    + +PN
Sbjct: 241 VTYES--PEVKRLLEVNSQIPDDSFMFVPN 261

[Close]
BLAST of CmoCh01G003640 vs. Swiss-Prot
Match: SINL9_ARATH (Putative E3 ubiquitin-protein ligase SINA-like 9 OS=Arabidopsis thaliana GN=At5g37910 PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 9.4e-35
Identity = 81/236 (34.32%), Postives = 125/236 (52.97%), Query Frame = 1 

Query: 23  KNEAMKVIFTDPQILDCYICCEPLSVPVYQCENGHISCSSCCSKVHNKCPSCSLAIGYIR 82
           K +   ++  D  ILDC ICCE L+ P++QC+NGH++C SCC K+ NKCP+C+L +G+ R
Sbjct: 22  KRQRSAIVLLDLDILDCPICCEALTSPIFQCDNGHLACGSCCPKLSNKCPACTLPVGHSR 81

Query: 83  CRAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSCPYEPCSCPISDCSYVDSAEHLG 142
            RA+E VLESI IPC N  +GC  +    + + HE  C +  CSCP S C Y  S + L 
Sbjct: 82  SRAMESVLESILIPCPNVRFGCTKSFFYGKESAHEKECIFSQCSCPSSVCDYTGSYKDLY 141

Query: 143 SHFRKRHPD----SAKSFLYNSRFTICLNSGDRYRIFQAENDDAVFVLSYSFEIFGNAVT 202
           +H++  H      + K F   + FT  +   D+  I +      +  +    E  G  VT
Sbjct: 142 AHYKLTHSTNIFWNIKRFRCANFFTTSMLISDKILIKRVHEKKLLLAVQCFREPCGVYVT 201

Query: 203 LSRIGSPLCE-KKFCYDIKAKSQGSVLSLQSVANEIRRWIE---DPPFKGSLLIPN 251
           +S I     E  +F Y +     G  ++ +S   E++R  +   + P +  +LIP+
Sbjct: 202 VSFIAPSAPEVGEFSYQLSYNVDGHTVTYES--PEVKRVCKVSIETPQENFMLIPH 255

[Close]
BLAST of CmoCh01G003640 vs. TrEMBL
Match: A0A0A0L9Z6_CUCSA (E3 ubiquitin-protein ligase OS=Cucumis sativus GN=Csa_3G185660 PE=3 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 4.7e-110
Identity = 191/269 (71.00%), Postives = 223/269 (82.90%), Query Frame = 1 

Query: 1   MADSRSSDGEKERRRSVNCSRGKNEAMKVIFTDPQILDCYICCEPLSVPVYQCENGHISC 60
           M DSRSSDG  ERR SV   RG N  + VIFTDPQILDCYICCEPLS+PV+QCENGHI+C
Sbjct: 1   MEDSRSSDGGSERRSSVISRRGTNGTLNVIFTDPQILDCYICCEPLSIPVFQCENGHIAC 60

Query: 61  SSCCSKVHNKCPSCSLAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSC 120
           SSCC+K  NKCPSC+LAIGYIRCRAIEKVLESIK+PCQN+ YGCK  M LN IN+HE+ C
Sbjct: 61  SSCCTKAQNKCPSCTLAIGYIRCRAIEKVLESIKLPCQNAIYGCKTVMGLNLINDHESLC 120

Query: 121 PYEPCSCPISDCSYVDSAEHLGSHFRKRHPDSAKSFLYNSRFTICLNSGDRYRIFQAEND 180
            YEPCSCP+ +C++V S E LG HF K+H DSAK F YN+RFTICLN+GD +RI +AEND
Sbjct: 121 RYEPCSCPLDNCTFVGSTEQLGLHFTKKHKDSAKIFSYNTRFTICLNNGDTHRILKAEND 180

Query: 181 DAVFVLSYSFEIFGNAVTLSRIGSPLCEKKFCYDIKAKSQGSVLSLQSVANEIRRWIEDP 240
             +F LSY+FEIFGNAVT++RIG    EKKFCY+IKAK+ GSVLSLQS+A EI+  I+ P
Sbjct: 181 GVLFFLSYTFEIFGNAVTMNRIGPLSSEKKFCYEIKAKTLGSVLSLQSIAKEIQGLIKVP 240

Query: 241 PFKGSLLIPNEFFGSSSAQTILEIRIWPS 270
           P KGSLLIPNE+FGSS+ QT+LEI IWP+
Sbjct: 241 PSKGSLLIPNEYFGSST-QTMLEISIWPA 268

[Close]
BLAST of CmoCh01G003640 vs. TrEMBL
Match: V4UW18_9ROSI (E3 ubiquitin-protein ligase OS=Citrus clementina GN=CICLE_v10012174mg PE=3 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 9.7e-63
Identity = 119/254 (46.85%), Postives = 161/254 (63.39%), Query Frame = 1 

Query: 3   DSRSSDGEKERRRSVNCSRGKNEAMKVIFTDPQILDCYICCEPLSVPVYQCENGHISCSS 62
           +S  + G  E+         +N    V  TDP++ DC IC E L+ PV+QCENGHI+CS+
Sbjct: 52  ESVDNGGNGEKADLDLAGPSRNGPFSVTVTDPEVFDCPICYESLTAPVFQCENGHIACST 111

Query: 63  CCSKVHNKCPSCSLAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSCPY 122
           CCSK+ NKCPSC   IGY RCRAIEKVLES+K+ C+NS YGCK+TM+  + ++HE  CP+
Sbjct: 112 CCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKVTCRNSNYGCKVTMSYGKKHDHEKICPH 171

Query: 123 EPCSCPISDCSYVDSAEHLGSHFRKRHPDSAKSFLYNSRFTICLNSGDRYRIFQAENDDA 182
            PCSCPI DC++V SA HL  HF  +H +SA  FLYN    + LN  +R+ + Q E D  
Sbjct: 172 VPCSCPIPDCNFVGSANHLYKHFSAKHKNSALHFLYNEVVEVTLNVKNRFIVLQEEGDGV 231

Query: 183 VFVLSYSFEIFGNAVTLSRIGSPLCEKKFCYDIKAKSQGSVLSLQSVANEIRRWIEDPPF 242
           +F+LS   E  G+ +++S I +P C+    Y I A   GS +  QS    I+  +++PP 
Sbjct: 232 LFILSSRSETLGHVISVSCI-APSCKGCLFYSIFAGPAGSTVRFQSFTKNIQNRVDNPPS 291

Query: 243 KGSLLIPNEFFGSS 257
            G LL+P E FGSS
Sbjct: 292 TGFLLVPIESFGSS 304

[Close]
BLAST of CmoCh01G003640 vs. TrEMBL
Match: A0A067FAH4_CITSI (E3 ubiquitin-protein ligase OS=Citrus sinensis GN=CISIN_1g020280mg PE=3 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 9.7e-63
Identity = 119/254 (46.85%), Postives = 161/254 (63.39%), Query Frame = 1 

Query: 3   DSRSSDGEKERRRSVNCSRGKNEAMKVIFTDPQILDCYICCEPLSVPVYQCENGHISCSS 62
           +S  + G  E+         +N    V  TDP++ DC IC E L+ PV+QCENGHI+CS+
Sbjct: 52  ESVDNGGNGEKADLDLAGPSRNGPFSVTVTDPEVFDCPICYESLTAPVFQCENGHIACST 111

Query: 63  CCSKVHNKCPSCSLAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSCPY 122
           CCSK+ NKCPSC   IGY RCRAIEKVLES+K+ C+NS YGCK+TM+  + ++HE  CP+
Sbjct: 112 CCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKVTCRNSNYGCKVTMSYGKKHDHEKICPH 171

Query: 123 EPCSCPISDCSYVDSAEHLGSHFRKRHPDSAKSFLYNSRFTICLNSGDRYRIFQAENDDA 182
            PCSCPI DC++V SA HL  HF  +H +SA  FLYN    + LN  +R+ + Q E D  
Sbjct: 172 VPCSCPIPDCNFVGSANHLYKHFSAKHKNSALHFLYNEVVEVTLNVKNRFIVLQEEGDGV 231

Query: 183 VFVLSYSFEIFGNAVTLSRIGSPLCEKKFCYDIKAKSQGSVLSLQSVANEIRRWIEDPPF 242
           +F+LS   E  G+ +++S I +P C+    Y I A   GS +  QS    I+  +++PP 
Sbjct: 232 LFILSSRSETLGHVISVSCI-APSCKGCLFYSIFAGPAGSTVRFQSFTKNIQNRVDNPPS 291

Query: 243 KGSLLIPNEFFGSS 257
            G LL+P E FGSS
Sbjct: 292 TGFLLVPIESFGSS 304

[Close]
BLAST of CmoCh01G003640 vs. TrEMBL
Match: W9S0Z7_9ROSA (E3 ubiquitin-protein ligase OS=Morus notabilis GN=L484_027128 PE=3 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.2e-62
Identity = 123/254 (48.43%), Postives = 166/254 (65.35%), Query Frame = 1 

Query: 3   DSRSSDGEKERRRSVNCSRGKNEAMKVIFTDPQILDCYICCEPLSVPVYQCENGHISCSS 62
           DS S+D  +E  R +  S   + ++ V  TDP +LDC IC E L+VPV+QCENGHI+CSS
Sbjct: 90  DSISADANQEDPRPL--STNSDRSISVFLTDPDVLDCCICFEALTVPVFQCENGHIACSS 149

Query: 63  CCSKVHNKCPSCSLAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSCPY 122
           CC+K+ NKCPSCS  IGY RCRAIEKVLES+KI CQN  YGCK  ++ ++I +HET+C +
Sbjct: 150 CCTKLGNKCPSCSWPIGYNRCRAIEKVLESVKIACQNKQYGCKEMVSYSEIKDHETTCTH 209

Query: 123 EPCSCPISDCSYVDSAEHLGSHFRKRHPDSAKSFLYNSRFTICLNSGDRYRIFQAENDDA 182
            PCSCP++ C+++ SA+ L  HFR +H DSA  F YN  FT+ LN GD++ + Q  +   
Sbjct: 210 APCSCPLTSCNFISSAKQLYQHFRSQHADSAVLFQYNCDFTVTLNEGDKFLVLQERDGGG 269

Query: 183 VFVLSYSFEIFGNAVTLSRIGSPLCEKKFCYDIKAKSQGSVLSLQSVANEIRRWIEDPPF 242
           +F+L+   E  GN V++S IG P    K  Y++ AK  G+ L L+S A   +   +    
Sbjct: 270 LFILNNETETLGNLVSVSCIG-PYSFGKSYYNLLAKCDGNTLRLESFATCTQGQADYSLS 329

Query: 243 KGSLLIPNEFFGSS 257
              LLIP  FFGSS
Sbjct: 330 SVYLLIPPGFFGSS 340

[Close]
BLAST of CmoCh01G003640 vs. TrEMBL
Match: A0A061EGM7_THECC (E3 ubiquitin-protein ligase OS=Theobroma cacao GN=TCM_019286 PE=3 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 4.8e-62
Identity = 112/254 (44.09%), Postives = 168/254 (66.14%), Query Frame = 1 

Query: 16  SVNCSRGKNEAMKVIFTDPQILDCYICCEPLSVPVYQCENGHISCSSCCSKVHNKCPSCS 75
           +++    ++ ++ +  TDP++LDC IC E L++PV+QCENGHI+CS CC K+ NKCPSC+
Sbjct: 82  AMSLETNRDGSISITLTDPEVLDCSICYEALTIPVFQCENGHIACSICCIKIRNKCPSCA 141

Query: 76  LAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSCPYEPCSCPISDCSYV 135
             IGY RCRAIEKVLES+K+ CQN+ YGC+     +   +HE  CPY PCSCP++DC++ 
Sbjct: 142 TPIGYSRCRAIEKVLESVKVSCQNTKYGCREAFRYSIKQKHEKICPYAPCSCPLADCNFE 201

Query: 136 DSAEHLGSHFRKRHPDSAKSFLYNSRFTICLNSGDRYRIFQAENDDAVFVLSYSFEIFGN 195
            S++ L  HFR +H  SA  F Y+   +I +   +R+ I Q E D ++F+L+   E  GN
Sbjct: 202 GSSKELYEHFRDKHKYSATRFQYDRTISITVGIDERFCILQEEQDGSLFILNNKVETLGN 261

Query: 196 AVTLSRIGSPLCEKKFCYDIKAK--SQGSVLSLQSVANEIRRWIEDPPFKGSLLIPNEFF 255
            VTLSRIG P  E+ F YD+ AK  ++ S + LQS      + +++PP  G LL+P++ F
Sbjct: 262 VVTLSRIG-PSEERGFFYDLMAKALTEASTVRLQSFTKSTPKQVDNPPSLGFLLVPSQ-F 321

Query: 256 GSSSAQTILEIRIW 268
             +S +  +++R+W
Sbjct: 322 SCNSRKLKMDLRLW 333

[Close]
BLAST of CmoCh01G003640 vs. TAIR10
Match: AT5G37930.1 (AT5G37930.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 196.8 bits (499), Expect = 1.7e-50
Identity = 109/280 (38.93%), Postives = 152/280 (54.29%), Query Frame = 1 

Query: 4   SRSSDGE---KERR-----RSVNCSRGKNEAMKVIFTDPQILDCYICCEPLSVPVYQCEN 63
           S  SD E   +ERR      S + S  K+  + V   DP +LDC ICCEPL +P++QC+N
Sbjct: 70  SDDSDREVVIEERRFGKFVNSQSSSSSKDSPLSVTLLDPDVLDCPICCEPLKIPIFQCDN 129

Query: 64  GHISCSSCCSKVHNKCPSCSLAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQINE 123
           GH++C+ CC+KV N+CPSC+L IGY+RCRA+EKV+E+ ++ C N+ YGCK + +      
Sbjct: 130 GHLACTLCCTKVRNRCPSCTLPIGYVRCRAMEKVIEASRVSCLNAKYGCKESTSYGNRFS 189

Query: 124 HETSCPYEPCSCPISDCSYVDSAEHLGSHFRKRHPDSAKSFLYNSRFTICLNSGDRYRIF 183
           HE  C + PCSCPI DC Y    + L +H R  H D   SF++N+R TI L+   +  I 
Sbjct: 190 HEQVCVFTPCSCPILDCHYTGYYKDLNNHVRAEHKDDLISFVWNTRLTISLDLNKKTTIL 249

Query: 184 QAENDDAVFVLSYSFEIFGNAVTLS-------RIGSPLCE-KKFCYDIKAKSQGSVLSLQ 243
           Q END  V V+     +    V++S        +G   C   K   D   K    V ++Q
Sbjct: 250 QEENDGHVIVVQVFRALHAVYVSVSCIAPLTPGVGRLSCRLAKITVDSLLKQGFMVKNIQ 309

Query: 244 SVANEIRRWIEDPPFKGSLLIPNEFFGSSSAQTILEIRIW 268
            V NE        P  G +LIP+  F   S    L ++IW
Sbjct: 310 KVTNE-------HPEDGFMLIPSYLF---SGNDNLNLQIW 339

[Close]
BLAST of CmoCh01G003640 vs. TAIR10
Match: AT5G37890.1 (AT5G37890.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 155.6 bits (392), Expect = 4.3e-38
Identity = 87/263 (33.08%), Postives = 143/263 (54.37%), Query Frame = 1 

Query: 12  ERRRSVNCSRGKNEAMK--VIFTDPQILDCYICCEPLSVPVYQCENGHISCSSCCSKVHN 71
           ++R+  +    K +A K   +  D +ILDC IC E  ++P++QC+NGH++CSSCC K++N
Sbjct: 22  QKRQLSSSDAAKRDAKKRSTMLMDLEILDCPICYEAFTIPIFQCDNGHLACSSCCPKLNN 81

Query: 72  KCPSCSLAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSCPYEPCSCPI 131
           KCP+C+  +G+ RCRA+E VLESI IPC N+  GCK  ++  +   HE  C +  C+CP 
Sbjct: 82  KCPACTSPVGHNRCRAMESVLESILIPCPNAKLGCKKNVSYGKELTHEKECMFSHCACPA 141

Query: 132 SDCSYVDSAEHLGSHFRKRHPD--SAKSFLYNSRFTICLNSGDRYRIFQAENDDAVFVLS 191
            DC+Y  S + L +H+R  H +     +F+ +   ++ +N   +  I      + +F + 
Sbjct: 142 LDCNYTSSYKDLYTHYRITHMEINQINTFICDIPLSVRMNISKKILIRTEHLTNHLFAVQ 201

Query: 192 YSFEIFGNAVTLSRIGSPLCE-KKFCYDIKAKSQGSVLSLQSVANEIRRWIE---DPPFK 251
              E +G  VT+S I     E  ++ Y +     G  +  QS   E++R ++     P +
Sbjct: 202 CFREPYGVYVTVSCIAPSSPELSQYSYALSYTVDGHTVIYQS--PEVKRVLKLSFQTPQE 261

Query: 252 GSLLIPNEFFGSSSAQTILEIRI 267
             +LIPN          +LE+RI
Sbjct: 262 NFMLIPNSLLRGD----VLEMRI 278

[Close]
BLAST of CmoCh01G003640 vs. TAIR10
Match: AT5G37870.1 (AT5G37870.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 150.6 bits (379), Expect = 1.4e-36
Identity = 84/255 (32.94%), Postives = 136/255 (53.33%), Query Frame = 1 

Query: 4   SRSSDGEKERRRSVNCSRGKNEAMKV---IFTDPQILDCYICCEPLSVPVYQCENGHISC 63
           S  +  +K    S++   G+    K    + TD  ILDC IC + L +PV+QC NGH++C
Sbjct: 7   SERNGSQKRHCSSISSDDGRKRVDKTRSAMLTDLDILDCPICYQALKIPVFQCGNGHLAC 66

Query: 64  SSCCSKVHNKCPSCSLAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSC 123
           SSCC K+ NKCP+C+L +G+IRCRA+E+VLES+ +PC+ +  GC  T+   + + HE  C
Sbjct: 67  SSCCPKLRNKCPACALPVGHIRCRAMERVLESVLVPCRYADLGCTKTIYYGRESTHEKIC 126

Query: 124 PYEPCSCPISDCSYVDSAEHLGSHFRKRHPDSAKSFLYN--SRFTICLNSGDRYRIFQAE 183
            + PCSCP+  C+Y  S + L  H+   H   + ++ +N  S     +   D+  I +  
Sbjct: 127 NFSPCSCPVQGCNYTGSYKDLYEHYDLTHSTGSTAYSFNGVSYIAAMMFISDKILIERVY 186

Query: 184 NDDAVFVLSYSFEIFGNAVTLSRIGSPLCE-KKFCYDIKAKS-QGSVLSLQS-VANEIRR 243
               +FV+    E  G  V++S I     E  +F Y +   + +G  ++ QS    ++ +
Sbjct: 187 EKKLLFVVQCFEEPCGVYVSVSCIAPSAPEVGEFSYGLLYTTWEGVTMTYQSPKVKKVLK 246

Query: 244 WIEDPPFKGSLLIPN 251
                P    +LIP+
Sbjct: 247 VSSQRPKDSFMLIPH 261

[Close]
BLAST of CmoCh01G003640 vs. TAIR10
Match: AT5G62800.1 (AT5G62800.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 150.6 bits (379), Expect = 1.4e-36
Identity = 90/270 (33.33%), Postives = 135/270 (50.00%), Query Frame = 1 

Query: 1   MADSRSSDGEKERRRSVNCSRGK----NEAMKVIFTDPQILDCYICCEPLSVPVYQCENG 60
           M DS S    +  +R  +  + K    NE       D  +LDC +C EPL++P +QC++G
Sbjct: 1   MEDSNSHPQNQTSKRKSSHPQKKQRMENETRSAKLLDLDVLDCPVCFEPLTIPTFQCDDG 60

Query: 61  HISCSSCCSKVHNKCPS--CSLAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQIN 120
           HI C+ C +KV NKCP   C L IG  RC A+E+VLES  +PCQN+ +GC  +++  +++
Sbjct: 61  HIVCNFCFAKVSNKCPGPGCDLPIGNKRCFAMERVLESAFVPCQNTEFGCTKSVSYEKVS 120

Query: 121 EHETSCPYEPCSCPISDCSYVDSAEHLGSHFRKRHPDSAKSFLYNSRFT----------I 180
            HE  C Y  CSCP  +C+Y  S   +  HF +RH       LYNS             +
Sbjct: 121 SHEKECNYSQCSCPNLECNYTGSYNIIYGHFMRRH-------LYNSTIVSSKWGYSTVDV 180

Query: 181 CLNSGDRYRIFQAENDDAVFVLSYSFEIFGNAVTLSRIGSPLCE-KKFCYDIKAKSQGSV 240
            +N  ++  +        +FV+    E  G  VT+ RI  P  E KKF Y +     G  
Sbjct: 181 LINIKEKVSVLWESRQKLLFVVQCFKERHGVYVTVRRIAPPASEFKKFSYRLSYSIDGHN 240

Query: 241 LSLQSVANEIRRWIE---DPPFKGSLLIPN 251
           ++ +S   E++R +E     P    + +PN
Sbjct: 241 VTYES--PEVKRLLEVNSQIPDDSFMFVPN 261

[Close]
BLAST of CmoCh01G003640 vs. TAIR10
Match: AT5G37910.1 (AT5G37910.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 148.7 bits (374), Expect = 5.3e-36
Identity = 81/236 (34.32%), Postives = 125/236 (52.97%), Query Frame = 1 

Query: 23  KNEAMKVIFTDPQILDCYICCEPLSVPVYQCENGHISCSSCCSKVHNKCPSCSLAIGYIR 82
           K +   ++  D  ILDC ICCE L+ P++QC+NGH++C SCC K+ NKCP+C+L +G+ R
Sbjct: 22  KRQRSAIVLLDLDILDCPICCEALTSPIFQCDNGHLACGSCCPKLSNKCPACTLPVGHSR 81

Query: 83  CRAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSCPYEPCSCPISDCSYVDSAEHLG 142
            RA+E VLESI IPC N  +GC  +    + + HE  C +  CSCP S C Y  S + L 
Sbjct: 82  SRAMESVLESILIPCPNVRFGCTKSFFYGKESAHEKECIFSQCSCPSSVCDYTGSYKDLY 141

Query: 143 SHFRKRHPD----SAKSFLYNSRFTICLNSGDRYRIFQAENDDAVFVLSYSFEIFGNAVT 202
           +H++  H      + K F   + FT  +   D+  I +      +  +    E  G  VT
Sbjct: 142 AHYKLTHSTNIFWNIKRFRCANFFTTSMLISDKILIKRVHEKKLLLAVQCFREPCGVYVT 201

Query: 203 LSRIGSPLCE-KKFCYDIKAKSQGSVLSLQSVANEIRRWIE---DPPFKGSLLIPN 251
           +S I     E  +F Y +     G  ++ +S   E++R  +   + P +  +LIP+
Sbjct: 202 VSFIAPSAPEVGEFSYQLSYNVDGHTVTYES--PEVKRVCKVSIETPQENFMLIPH 255

[Close]
BLAST of CmoCh01G003640 vs. NCBI nr
Match: gi|778679778|ref|XP_004140738.2| (PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 [Cucumis sativus])

HSP 1 Score: 405.6 bits (1041), Expect = 6.8e-110
Identity = 191/269 (71.00%), Postives = 223/269 (82.90%), Query Frame = 1 

Query: 1   MADSRSSDGEKERRRSVNCSRGKNEAMKVIFTDPQILDCYICCEPLSVPVYQCENGHISC 60
           M DSRSSDG  ERR SV   RG N  + VIFTDPQILDCYICCEPLS+PV+QCENGHI+C
Sbjct: 1   MEDSRSSDGGSERRSSVISRRGTNGTLNVIFTDPQILDCYICCEPLSIPVFQCENGHIAC 60

Query: 61  SSCCSKVHNKCPSCSLAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSC 120
           SSCC+K  NKCPSC+LAIGYIRCRAIEKVLESIK+PCQN+ YGCK  M LN IN+HE+ C
Sbjct: 61  SSCCTKAQNKCPSCTLAIGYIRCRAIEKVLESIKLPCQNAIYGCKTVMGLNLINDHESLC 120

Query: 121 PYEPCSCPISDCSYVDSAEHLGSHFRKRHPDSAKSFLYNSRFTICLNSGDRYRIFQAEND 180
            YEPCSCP+ +C++V S E LG HF K+H DSAK F YN+RFTICLN+GD +RI +AEND
Sbjct: 121 RYEPCSCPLDNCTFVGSTEQLGLHFTKKHKDSAKIFSYNTRFTICLNNGDTHRILKAEND 180

Query: 181 DAVFVLSYSFEIFGNAVTLSRIGSPLCEKKFCYDIKAKSQGSVLSLQSVANEIRRWIEDP 240
             +F LSY+FEIFGNAVT++RIG    EKKFCY+IKAK+ GSVLSLQS+A EI+  I+ P
Sbjct: 181 GVLFFLSYTFEIFGNAVTMNRIGPLSSEKKFCYEIKAKTLGSVLSLQSIAKEIQGLIKVP 240

Query: 241 PFKGSLLIPNEFFGSSSAQTILEIRIWPS 270
           P KGSLLIPNE+FGSS+ QT+LEI IWP+
Sbjct: 241 PSKGSLLIPNEYFGSST-QTMLEISIWPA 268

[Close]
BLAST of CmoCh01G003640 vs. NCBI nr
Match: gi|659114528|ref|XP_008457096.1| (PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SINA-like 10 [Cucumis melo])

HSP 1 Score: 303.5 bits (776), Expect = 3.6e-79
Identity = 143/215 (66.51%), Postives = 169/215 (78.60%), Query Frame = 1 

Query: 1   MADSRSSDGEKERRRSVNCSRGKNEAMKVIFTDPQILDCYICCEPLSVPVYQCENGHISC 60
           MADS+SSDG  ERR SV   RG N  M VIFTDPQILDCYIC   LS+P++QCEN HI+C
Sbjct: 1   MADSQSSDGGSERRSSVISRRGTNGTMNVIFTDPQILDCYICWNXLSIPIFQCENXHIAC 60

Query: 61  SSCCSKVHNKCPSCSLAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSC 120
           SSCC+KV NKCPSC LAIGYIRCRAIEKVLESIK+PC+N+ Y CK  M+LN IN+ ET C
Sbjct: 61  SSCCTKVQNKCPSCILAIGYIRCRAIEKVLESIKLPCKNAIYRCKTAMDLNLINDQETLC 120

Query: 121 PYEPCSCPISDCSYVDSAEHLGSHFRKRHPDSAKSFLYNSRFTICLNSGDRYRIFQAEND 180
            YEPCSCP+ +C++V  AE L  HF +RH +SAK F YN+RFTICLN+GD YRI +AE+D
Sbjct: 121 RYEPCSCPLDNCTFVGLAEQLYLHFSRRHKNSAKHFSYNTRFTICLNNGDTYRILKAEDD 180

Query: 181 DAVFVLSYSFEIFGNAVTLSRIGSPLCEKKFCYDI 216
             +F LSY+FEIFGNA+T++ IG    EKKF Y I
Sbjct: 181 GVLFFLSYTFEIFGNAITVNWIGPLSSEKKFSYKI 215

[Close]
BLAST of CmoCh01G003640 vs. NCBI nr
Match: gi|470135025|ref|XP_004303331.1| (PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 isoform X3 [Fragaria vesca subsp. vesca])

HSP 1 Score: 255.8 bits (652), Expect = 8.7e-65
Identity = 125/244 (51.23%), Postives = 156/244 (63.93%), Query Frame = 1 

Query: 24  NEAMKVIFTDPQILDCYICCEPLSVPVYQCENGHISCSSCCSKVHNKCPSCSLAIGYIRC 83
           + ++ +   DP +LDC ICCE L+VPV+QCENGHI+CSSC +KV NKCPSCS  IGY RC
Sbjct: 106 DRSISITLADPDVLDCPICCESLTVPVFQCENGHIACSSCSTKVKNKCPSCSWPIGYNRC 165

Query: 84  RAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSCPYEPCSCPISDCSYVDSAEHLGS 143
           RAIEKVLESI+I CQN  YGCK  M  +  NEHE  C + PCSCP S C++V S + L  
Sbjct: 166 RAIEKVLESIRISCQNIKYGCKEWMTCDNKNEHEKGCMHSPCSCPHSGCNFVSSTKQLYQ 225

Query: 144 HFRKRHPDSAKSFLYNSRFTICLNSGDRYRIFQAENDDAVFVLSYSFEIFGNAVTLSRIG 203
           HF   H +SA  FLYN  F+I +N  D++ + Q END  +F+L    EI GN V LS I 
Sbjct: 226 HFSSNHLNSATRFLYNCSFSITINFNDKFVVLQEENDGMLFILDNESEIIGNMVRLSSI- 285

Query: 204 SPLCEKKFCYDIKAKSQGSVLSLQSVANEIRRWIEDPPFKGSLLIPNEFFGSSSAQTILE 263
            P     F YD+ AK +G +L LQS     +  +  P   GSL+IP +FF SS  Q  L+
Sbjct: 286 QPRFMGGFFYDLTAKRKGCLLRLQSFTTSTQSHVRSPTSSGSLIIPGDFF-SSCGQLKLD 345

Query: 264 IRIW 268
           I IW
Sbjct: 346 ICIW 347

[Close]
BLAST of CmoCh01G003640 vs. NCBI nr
Match: gi|764606798|ref|XP_011467110.1| (PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 isoform X2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 255.8 bits (652), Expect = 8.7e-65
Identity = 125/244 (51.23%), Postives = 156/244 (63.93%), Query Frame = 1 

Query: 24  NEAMKVIFTDPQILDCYICCEPLSVPVYQCENGHISCSSCCSKVHNKCPSCSLAIGYIRC 83
           + ++ +   DP +LDC ICCE L+VPV+QCENGHI+CSSC +KV NKCPSCS  IGY RC
Sbjct: 106 DRSISITLADPDVLDCPICCESLTVPVFQCENGHIACSSCSTKVKNKCPSCSWPIGYNRC 165

Query: 84  RAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSCPYEPCSCPISDCSYVDSAEHLGS 143
           RAIEKVLESI+I CQN  YGCK  M  +  NEHE  C + PCSCP S C++V S + L  
Sbjct: 166 RAIEKVLESIRISCQNIKYGCKEWMTCDNKNEHEKGCMHSPCSCPHSGCNFVSSTKQLYQ 225

Query: 144 HFRKRHPDSAKSFLYNSRFTICLNSGDRYRIFQAENDDAVFVLSYSFEIFGNAVTLSRIG 203
           HF   H +SA  FLYN  F+I +N  D++ + Q END  +F+L    EI GN V LS I 
Sbjct: 226 HFSSNHLNSATRFLYNCSFSITINFNDKFVVLQEENDGMLFILDNESEIIGNMVRLSSI- 285

Query: 204 SPLCEKKFCYDIKAKSQGSVLSLQSVANEIRRWIEDPPFKGSLLIPNEFFGSSSAQTILE 263
            P     F YD+ AK +G +L LQS     +  +  P   GSL+IP +FF SS  Q  L+
Sbjct: 286 QPRFMGGFFYDLTAKRKGCLLRLQSFTTSTQSHVRSPTSSGSLIIPGDFF-SSCGQLKLD 345

Query: 264 IRIW 268
           I IW
Sbjct: 346 ICIW 347

[Close]
BLAST of CmoCh01G003640 vs. NCBI nr
Match: gi|764606792|ref|XP_011467109.1| (PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 isoform X1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 255.8 bits (652), Expect = 8.7e-65
Identity = 125/244 (51.23%), Postives = 156/244 (63.93%), Query Frame = 1 

Query: 24  NEAMKVIFTDPQILDCYICCEPLSVPVYQCENGHISCSSCCSKVHNKCPSCSLAIGYIRC 83
           + ++ +   DP +LDC ICCE L+VPV+QCENGHI+CSSC +KV NKCPSCS  IGY RC
Sbjct: 106 DRSISITLADPDVLDCPICCESLTVPVFQCENGHIACSSCSTKVKNKCPSCSWPIGYNRC 165

Query: 84  RAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSCPYEPCSCPISDCSYVDSAEHLGS 143
           RAIEKVLESI+I CQN  YGCK  M  +  NEHE  C + PCSCP S C++V S + L  
Sbjct: 166 RAIEKVLESIRISCQNIKYGCKEWMTCDNKNEHEKGCMHSPCSCPHSGCNFVSSTKQLYQ 225

Query: 144 HFRKRHPDSAKSFLYNSRFTICLNSGDRYRIFQAENDDAVFVLSYSFEIFGNAVTLSRIG 203
           HF   H +SA  FLYN  F+I +N  D++ + Q END  +F+L    EI GN V LS I 
Sbjct: 226 HFSSNHLNSATRFLYNCSFSITINFNDKFVVLQEENDGMLFILDNESEIIGNMVRLSSI- 285

Query: 204 SPLCEKKFCYDIKAKSQGSVLSLQSVANEIRRWIEDPPFKGSLLIPNEFFGSSSAQTILE 263
            P     F YD+ AK +G +L LQS     +  +  P   GSL+IP +FF SS  Q  L+
Sbjct: 286 QPRFMGGFFYDLTAKRKGCLLRLQSFTTSTQSHVRSPTSSGSLIIPGDFF-SSCGQLKLD 345

Query: 264 IRIW 268
           I IW
Sbjct: 346 ICIW 347

The following BLAST results are available for this feature:
BLAST of CmoCh01G003640 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SIL10_ARATH3.0e-4938.93E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana GN=At5g37930 PE... [more]
SINL7_ARATH7.7e-3733.08E3 ubiquitin-protein ligase SINA-like 7 OS=Arabidopsis thaliana GN=At5g37890 PE=... [more]
SINL6_ARATH2.5e-3532.94Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis thaliana GN=At5g... [more]
SIL11_ARATH2.5e-3533.33E3 ubiquitin-protein ligase SINA-like 11 OS=Arabidopsis thaliana GN=At5g62800 PE... [more]
SINL9_ARATH9.4e-3534.32Putative E3 ubiquitin-protein ligase SINA-like 9 OS=Arabidopsis thaliana GN=At5g... [more]
BLAST of CmoCh01G003640 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9Z6_CUCSA4.7e-11071.00E3 ubiquitin-protein ligase OS=Cucumis sativus GN=Csa_3G185660 PE=3 SV=1[more]
V4UW18_9ROSI9.7e-6346.85E3 ubiquitin-protein ligase OS=Citrus clementina GN=CICLE_v10012174mg PE=3 SV=1[more]
A0A067FAH4_CITSI9.7e-6346.85E3 ubiquitin-protein ligase OS=Citrus sinensis GN=CISIN_1g020280mg PE=3 SV=1[more]
W9S0Z7_9ROSA2.2e-6248.43E3 ubiquitin-protein ligase OS=Morus notabilis GN=L484_027128 PE=3 SV=1[more]
A0A061EGM7_THECC4.8e-6244.09E3 ubiquitin-protein ligase OS=Theobroma cacao GN=TCM_019286 PE=3 SV=1[more]
BLAST of CmoCh01G003640 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G37930.11.7e-5038.93 Protein with RING/U-box and TRAF-like domains[more]
AT5G37890.14.3e-3833.08 Protein with RING/U-box and TRAF-like domains[more]
AT5G37870.11.4e-3632.94 Protein with RING/U-box and TRAF-like domains[more]
AT5G62800.11.4e-3633.33 Protein with RING/U-box and TRAF-like domains[more]
AT5G37910.15.3e-3634.32 Protein with RING/U-box and TRAF-like domains[more]
BLAST of CmoCh01G003640 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778679778|ref|XP_004140738.2|6.8e-11071.00PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 [Cucumis sativus][more]
gi|659114528|ref|XP_008457096.1|3.6e-7966.51PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SINA-like 10 [Cucumi... [more]
gi|470135025|ref|XP_004303331.1|8.7e-6551.23PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 isoform X3 [Fragaria vesca s... [more]
gi|764606798|ref|XP_011467110.1|8.7e-6551.23PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 isoform X2 [Fragaria vesca s... [more]
gi|764606792|ref|XP_011467109.1|8.7e-6551.23PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 isoform X1 [Fragaria vesca s... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004162SINA-like
IPR008974TRAF-like
IPR013010Znf_SIAH
IPR013083Znf_RING/FYVE/PHD
IPR013323SIAH-type domain
IPR0181217-in-absentia-prot_TRAF-dom
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
GO:0007275multicellular organism development
GO:0016567protein ubiquitination
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO:0004842ubiquitin-protein transferase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007275 multicellular organism development
biological_process GO:0016567 protein ubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005634 nucleus
molecular_function GO:0016874 ligase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G003640.1CmoCh01G003640.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004162E3 ubiquitin-protein ligase SIN-likePANTHERPTHR10315SEVEN IN ABSENTIA HOMOLOGcoord: 10..267
score: 2.0
IPR008974TRAF-likeunknownSSF49599TRAF domain-likecoord: 92..254
score: 1.05
IPR013010Zinc finger, SIAH-typePROFILEPS51081ZF_SIAHcoord: 92..150
score: 1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 34..104
score: 1.
IPR013323SIAH-type domainGENE3DG3DSA:3.90.890.10coord: 105..145
score: 2.1
IPR018121Seven-in-absentia protein, TRAF-like domainPFAMPF03145Sinacoord: 81..238
score: 3.2
NoneNo IPR availablePANTHERPTHR10315:SF43E3 UBIQUITIN-PROTEIN LIGASEcoord: 10..267
score: 2.0