CsGy2G009980 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTGGGCTTTCATGCGCCCGGGTTCCACTGTTTCCCTCTGTACTCTACACTTCAGCCTCTCCTTCATCTTTTTCAGGTTCTTTCGTTTTCGAAACCTCCCAATTCCCAAATCCCATTTCTCCATTACAGCCAACTCTTGCTTAATTCGTCCACTTGATCGTCGAAAAAGCTCTCTGAGATGACGGAAGCCGCGATTCGGAAGAAACCTGGCATGGCTAGCGTCAAAGATATGCCGATCCTCCAAGACGGGCCACCGCCGGGTGGATTCGCTCCGGTTCGCTACGCTCGCCGGATTCCCACTAAAGGCCCTAGCGCTATGGCCATTTTCCTTACTGCTTTTGGTGCATTCTCTTGGGGGATGTATCAGGTCGGCAAGGGCAACAAGATCCGAAGGTCTGTATTTTCTCCCCCATTATCTTAGTTTAGTCTATGGTATTTGCCTGTTTTATATCATTTTATCGGTAATGGAGTTAATTGGTTTATGTATCTGAGTGTCGTTTTTTCTGCGAACAGTGGGGCTAGTTTGATTGAGATTTAGTAGAGTTCTGGACCCAGAATTTTTGTTAGGGATTTGTTGAATTTTATTGAGATTGGAGATTCATGCTTTAGGTTGTTTTGAATTTTACCGTTTTGCTGCTTAGATGCGTTGGAGCGAATTTGTATTGAGACTTTAGGTTCGGTACCTGGATTTGATTCTGTATCAAGTCAATTGATTTAAAAAAATTAGCACTTTCTTTGCTACTTTGATTGAGGGTGGGTTGATGCATCTTCTCCCTTCCACTTTTTGCATTTCACTTTAAATCGACGAAGCTTAAGTTTCATACATCTTGTAAAATATCTTCAAATTTTCATTTACTTTTAGAAATTTTCCATGAAGCAATTAATAAGTTACTCATAATTAAACTAAGAATTAATACTCAAAACGACAGACAAAAAAAGCTCACATTCAGCAATGAAATGTTCACACCCAAGGAAAAGTTTTCTTTTTTCCAATACAACTAGAAGATTCAAGCCCACAAAAAGCCACTAGACAAAGGGTTTCCAACTGAGAATGATGTTGCCTGAGTCATAATTATAAAAGTCTTAAATACCAAAGAAACATGAAACCTCATCAGAGACCAAACCTCCCAGTTCCCTCTCCACACCGTGAAACAATCTATTGTTCCTCTCCTCTCAAAGATCCCTTAAAACCGCACATATCCTTGCCCAAAAAAGAAAACAAACACACTCTTTGAAAGGCGGATGGAGGAGGAACTCCCCAAATCATCAAGTGAACATCCCTTTCTAGCTAACAAGATATCCCTTTGGGTTCCTTTTTTTTCTTTTCTATATGCTCTTTTTTTTTTTCATTTTTTTCTCAATGGAAAGTTGGAAACAGTTGTTTCTATAAAAAAAATACAACTAGAAGATTCAATACTTGCAAAGTAACATTGTTCATTCATAAGAACTATCATGGACAATAAATTCTCCTTAATTTTATAGTACTACAATATTGTCCATTTAAAGTATAAATCCTCATTACTTTGTGATTTAGTAGAAATAGGATATTATGGTCAAATCCTTAATCTATTAGGATTAGGATTAGGATTAGGATTAGGATTAGTTTCTTTTATTTATTAAGATTAGGATTAGTTTCTTCTTTTATTAGGATTTGGATTAGTTTCTTTTATTAGGATTAGGATTAATTTCTTTTATTAGTATTAGGATTAGTTTCTTTTATTTATTAGGACGAAGGATTAGTTTCTTTTATTAATTAGGATGAGTATTAGTTTCGTTTATTAATTAGGATTAGGATTAGTTTGCTATAAATAGAGTACTTGTCTTCTTGTATTCACAACTTTTAAACATTAAAAAAAGTCTCTCAATTGGTTTACATCACTTAGCTTTTGATTTTGTCATAAATACCCCATACCATTGAAGATAGTTGTCCCATTTATACACATTATCTTTGAACAAGTGAGGGACTATCAAACTCACAACGCCAAATAATATGGTCCAGGTATCTTCTCCATTTCTGACTAAGAATACAACAGAAAGGACCAACTAGTGAGGGCAACTTCCTCTTGTGTTGATGCATCGTGTTAGAACAATGTAAAACTTAACAAGGAAAGAACCTCACTCTCGTGGGTATCTTAATCCTCCAAAGTCTAGAAAAAATTGACAGATCTGGAGACGAAAGATCAACCAAACTGAAAGAAAGATTTGCACAAGAATTCTGGCTTCTAAAAAGGAATACAACAAAAAGGACCAACTAGTGTGGGCAACTTCCTCTTCAGTCGATGGATCGTGTTAGCATGGCCGTGTAAAACTTACCAAGGAAAGAACCTCACTTTCTTGGGGATTTTAATCCTCCAAAGTACCGAAAAAACTGACAGATCTAGGTGAGAGGGATCAACCAAACTACGAAAGAAAGGCTTATACAAGAGCCCTTCAATGGATTGGGCCTTCAAACCTTGACTTTTCTACTCCCACGCCTAAAGGGGGGCCCTCAAGTTAGGAAAGTAGAAAGCATCATATCCATCACTTCCCTATTGGAAAGAGCGCGAATACCCCGAAAGACAAATAGCAAGAGTTCCCATGCACAAGAAAGTCAACAATAAAATGGTTCTTTAAGGAAGACAAATGATATAGACAAGGGAGCAAAGAAAAATAGGTCTCTCCCCCACCTAATCCTCTTGCCAATAATACTTGTCCCTTCCTTCCCCAGCCCACCACACACCGGACCAAATGAACAAAATAAATTATCTCTTGTGAAATATTCTTCTACAAGTGCTAGTGAGTACCTTTAACCCCCTCTAACAGCCACTCGAAAGGATGGAGGCCATGTTTAGTAACAATAACTCTATGCAAAAGAGAACTGGGCTCTAGGAGAAATGCCATAGCAATTTGACTACTAAAGCTTTGTTATGAGTGCTTAGATTCTCTAATTCTACCCTCTCCCCAGAAAAAGGCCACCTCTTATTTAATTAAGTGTGCTCCCTTCCCAGAAAAACCGCACATCAACCACCTCTCCAAACTCTTACAAACCTTGCACGTGGCTCTAGAAAGGAAGCAAACTCATATTCTCTAGAGCACACTGCTTGACTAATATATAGCTCAATCATGGATCTCCACATGACTACGTCGTTGAAGCTAATCAATATCCACTTGTTAACTTCCTAATGATTATAGCATCCGGTTAGGTACTTAGGTTTGGTGCATGTCTTTGATACCACTTGTTTGATGATGAATCTTCCTATACTTTTTTTTCTGGAAAGGGAATTGAACTCTTATTTAGAAAATGAAACGAGACTTAATGCTCCAAAGTACAATGACAAACCTTTCTATACTTTTACTATTCTATTATATTGTGCATTTTGGCCATAAGTCTTCTTAGATTTACTTTGGGTTTTACCCAATAGGACTTCACCTGGATATCTCAACTAGGTTGACACCCCATAACGACAATCATCCTAAAGGATAATTACAAAAAACCTTCAAAGTCAAAGCCCAATGAGAAACATGAAAACGAGCAAGAGACCATTTTCTCTAGCATCCCTCTCAGCCCTTCTAAACACTCTTCTATCCTCTCACCTCACAACACCCAAGTAATAGCACAAGCACAAGCACAAGCACGCATTTATTTAAGTTTAAGGTTTAATTTGATAAAATTAAAAGTTACATATTTAATTGGATTCATTTAGCCAAGAACAGGTAATAAAAGTAGACTTTTCCTATTTGACTGTTGCAAAAAGTGGTCATTTGAGGACTTCATAGGTGGACATAGATGTCGAGCAGTGGTTTTAGTCACTTCTATTCACCATAAGATAATTTCTTGGTAGTAAATTATACATGCATCCATTTAGTTTTCTAGGGAAGTTGAATGTAGTCAAGCAGATCATTTGAATTTCAACTTTAAACTACCACTTTTACTTGTCCATTTATTTAGTTTTTCATGGCACATTGTTCTCTCATTGAATTACTGCAAAAGCATCTTTAGAATGAAAGGTGCCTGTATTACATTGCTTCCAAAGGAAAAGTTAGTGTAGCTTCTTCGTACTTAGAACGTTTGTTTATGGGATTGATAGATAGTTAAAAGAATGGTGTTATCTGCTCCCCTTTGTTCCCATCTTTTCCCTTCACTCAAAGGAGATGAATGGGCTGACCACATGACACATTAAGACGAATCCAAGTATTACATTTAAAAGACGAGCATCTCATGGTTTCTTCTATGTTCCTTTCCATTTGGTTTGGGGATATGCTAAAGATGATGTCATGCTTTTCATTTGGCCATTGTTTCTTCCTATTTGTGGTTGGTTAGATTACCGTTATATATTTCTATTGTACACTATGAAGTTCACAATGAGGACACAAAGCATGTACAGCGCATTGGCCTAAAAATATAGTATTATATTTTACTTACCTTTGCAATCTCTTGTAGGGCACTGAAAGAAGAAAAATATGCAGCTCGGCGAGCAATATTGCCTGTGCTTCAAGCTGAGGAAGATGAAAGGTAAAATGGATGATTTTTTGTGTAGGCTGCCCTCAATCTTCCAGTAACACTGGTTGAAACTATTGGTTCCTTCAATGGCTTTAGAAAAGTTTTACATCATTTTCTTGTCTGTTCTCACTTTCTAGATTTGTCAAAGAGTGGAAGAGTTACCTCGAATATGAGGCTGAAGTTATGAAGGATGTGCCTGGTTGGAAAGTTGGTGAAAGTGTTTACAACTCCGGAAAATGGATGCCTCCAGCAACCGGTGAGCTACGACCCGAAGTCTGGTGATTTTGTTTCAAACAGATTCATTTGTGGTTGACATGTAGTTTGGTTTTGTATGCTTGCAACTTATCCTCACATGGGTTTCTTGATTTGCTGGTTCATGGCCCTCCTTATAAAAATAAAAGCATGTCAAAATTTCTTCAAATGTTTTGCAAATACTACTGCTAAAACTGTCTTCTTTACTCGGTGAACATCTCTTTCTACTCATGTATCTCACTAAAAAGTTGGGACTTGGAATTAGATGTGAATTTGTCTTCATTCTTTTTCACTTAATTGATATGGTAGCAGTGGCTTTTTGAGAGCAAAAGTGATTGTGGAGGGTTAAATTATAATTAAGTTTCAGCAAATATTTACCTTGTTTGTGGCTTGTGGCTATTGGAATAATTGTTGGAAAGTCGAATGGACTCTCTTGGTGTACACCAATTCTATTTGATAAGAGCAACATCGGTGTGTTTGGGGGAGGGAAAAGATTGCAACCCATTCCCTTCCTTGTTTGGGGATGAGTTATCACAACCCTTCCCCAAACTCCATCAACCCTGCCTTAATCCTCCCTTGATAATAATAATAATTTTCACAATCCTTCCTACACAACCCATCTTCCACTCAAATATTACCGTAATACTACCTATTATTTTCCTTTTCTCAAACACATACTATCATAACACTATCATTCATAATCTTGCTCTCTAATAACACTATCAATAATAAACATTCCACCAAACACATATTATCATAACATAGAATTATCATAATCATTTTTCTG GTGGGCTTTCATGCGCCCGGGTTCCACTGTTTCCCTCTGTACTCTACACTTCAGCCTCTCCTTCATCTTTTTCAGGTTCTTTCGTTTTCGAAACCTCCCAATTCCCAAATCCCATTTCTCCATTACAGCCAACTCTTGCTTAATTCGTCCACTTGATCGTCGAAAAAGCTCTCTGAGATGACGGAAGCCGCGATTCGGAAGAAACCTGGCATGGCTAGCGTCAAAGATATGCCGATCCTCCAAGACGGGCCACCGCCGGGTGGATTCGCTCCGGTTCGCTACGCTCGCCGGATTCCCACTAAAGGCCCTAGCGCTATGGCCATTTTCCTTACTGCTTTTGGTGCATTCTCTTGGGGGATGTATCAGGTCGGCAAGGGCAACAAGATCCGAAGGGCACTGAAAGAAGAAAAATATGCAGCTCGGCGAGCAATATTGCCTGTGCTTCAAGCTGAGGAAGATGAAAGATTTGTCAAAGAGTGGAAGAGTTACCTCGAATATGAGGCTGAAGTTATGAAGGATGTGCCTGGTTGGAAAGTTGGTGAAAGTGTTTACAACTCCGGAAAATGGATGCCTCCAGCAACCGGTGAGCTACGACCCGAAGTCTGGTGATTTTGTTTCAAACAGATTCATTTGTGGTTGACATGTAGTTTGGTTTTGTATGCTTGCAACTTATCCTCACATGGGTTTCTTGATTTGCTGGTTCATGGCCCTCCTTATAAAAATAAAAGCATGTCAAAATTTCTTCAAATGTTTTGCAAATACTACTGCTAAAACTGTCTTCTTTACTCGGTGAACATCTCTTTCTACTCATGTATCTCACTAAAAAGTTGGGACTTGGAATTAGATGTGAATTTGTCTTCATTCTTTTTCACTTAATTGATATGGTAGCAGTGGCTTTTTGAGAGCAAAAGTGATTGTGGAGGGTTAAATTATAATTAAGTTTCAGCAAATATTTACCTTGTTTGTGGCTTGTGGCTATTGGAATAATTGTTGGAAAGTCGAATGGACTCTCTTGGTGTACACCAATTCTATTTGATAAGAGCAACATCGGTGTGTTTGGGGGAGGGAAAAGATTGCAACCCATTCCCTTCCTTGTTTGGGGATGAGTTATCACAACCCTTCCCCAAACTCCATCAACCCTGCCTTAATCCTCCCTTGATAATAATAATAATTTTCACAATCCTTCCTACACAACCCATCTTCCACTCAAATATTACCGTAATACTACCTATTATTTTCCTTTTCTCAAACACATACTATCATAACACTATCATTCATAATCTTGCTCTCTAATAACACTATCAATAATAAACATTCCACCAAACACATATTATCATAACATAGAATTATCATAATCATTTTTCTG ATGACGGAAGCCGCGATTCGGAAGAAACCTGGCATGGCTAGCGTCAAAGATATGCCGATCCTCCAAGACGGGCCACCGCCGGGTGGATTCGCTCCGGTTCGCTACGCTCGCCGGATTCCCACTAAAGGCCCTAGCGCTATGGCCATTTTCCTTACTGCTTTTGGTGCATTCTCTTGGGGGATGTATCAGGTCGGCAAGGGCAACAAGATCCGAAGGGCACTGAAAGAAGAAAAATATGCAGCTCGGCGAGCAATATTGCCTGTGCTTCAAGCTGAGGAAGATGAAAGATTTGTCAAAGAGTGGAAGAGTTACCTCGAATATGAGGCTGAAGTTATGAAGGATGTGCCTGGTTGGAAAGTTGGTGAAAGTGTTTACAACTCCGGAAAATGGATGCCTCCAGCAACCGGTGAGCTACGACCCGAAGTCTGGTGA MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW
BLAST of CsGy2G009980 vs. NCBI nr
Match: XP_004147172.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucumis sativus] >KGN61547.1 hypothetical protein Csa_2G169710 [Cucumis sativus]) HSP 1 Score: 295.4 bits (755), Expect = 1.0e-76 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0
BLAST of CsGy2G009980 vs. NCBI nr
Match: XP_022959289.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucurbita moschata] >XP_023549201.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucurbita pepo subsp. pepo]) HSP 1 Score: 294.3 bits (752), Expect = 2.3e-76 Identity = 142/143 (99.30%), Postives = 143/143 (100.00%), Query Frame = 0
BLAST of CsGy2G009980 vs. NCBI nr
Match: XP_023000560.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucurbita maxima]) HSP 1 Score: 294.3 bits (752), Expect = 2.3e-76 Identity = 142/143 (99.30%), Postives = 143/143 (100.00%), Query Frame = 0
BLAST of CsGy2G009980 vs. NCBI nr
Match: XP_008460702.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucumis melo]) HSP 1 Score: 293.1 bits (749), Expect = 5.1e-76 Identity = 142/143 (99.30%), Postives = 142/143 (99.30%), Query Frame = 0
BLAST of CsGy2G009980 vs. NCBI nr
Match: XP_023514672.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 293.1 bits (749), Expect = 5.1e-76 Identity = 141/143 (98.60%), Postives = 143/143 (100.00%), Query Frame = 0
BLAST of CsGy2G009980 vs. TAIR10
Match: AT2G33220.1 (GRIM-19 protein) HSP 1 Score: 269.6 bits (688), Expect = 1.1e-72 Identity = 127/143 (88.81%), Postives = 135/143 (94.41%), Query Frame = 0
BLAST of CsGy2G009980 vs. TAIR10
Match: AT1G04630.1 (GRIM-19 protein) HSP 1 Score: 263.1 bits (671), Expect = 1.0e-70 Identity = 123/143 (86.01%), Postives = 132/143 (92.31%), Query Frame = 0
BLAST of CsGy2G009980 vs. Swiss-Prot
Match: sp|O49313|NDADB_ARATH (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B OS=Arabidopsis thaliana OX=3702 GN=At2g33220 PE=2 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 2.0e-71 Identity = 127/143 (88.81%), Postives = 135/143 (94.41%), Query Frame = 0
BLAST of CsGy2G009980 vs. Swiss-Prot
Match: sp|Q8RWA7|NDADA_ARATH (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-A OS=Arabidopsis thaliana OX=3702 GN=MEE4 PE=2 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 1.8e-69 Identity = 123/143 (86.01%), Postives = 132/143 (92.31%), Query Frame = 0
BLAST of CsGy2G009980 vs. Swiss-Prot
Match: sp|Q95KV7|NDUAD_BOVIN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Bos taurus OX=9913 GN=NDUFA13 PE=1 SV=3) HSP 1 Score: 114.8 bits (286), Expect = 8.1e-25 Identity = 55/119 (46.22%), Postives = 80/119 (67.23%), Query Frame = 0
BLAST of CsGy2G009980 vs. Swiss-Prot
Match: sp|Q0MQ89|NDUAD_GORGO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Gorilla gorilla gorilla OX=9595 GN=NDUFA13 PE=2 SV=3) HSP 1 Score: 113.6 bits (283), Expect = 1.8e-24 Identity = 54/119 (45.38%), Postives = 78/119 (65.55%), Query Frame = 0
BLAST of CsGy2G009980 vs. Swiss-Prot
Match: sp|Q9P0J0|NDUAD_HUMAN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Homo sapiens OX=9606 GN=NDUFA13 PE=1 SV=3) HSP 1 Score: 113.6 bits (283), Expect = 1.8e-24 Identity = 54/119 (45.38%), Postives = 78/119 (65.55%), Query Frame = 0
BLAST of CsGy2G009980 vs. TrEMBL
Match: tr|A0A0A0LLE8|A0A0A0LLE8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G169710 PE=4 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 6.7e-77 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0
BLAST of CsGy2G009980 vs. TrEMBL
Match: tr|A0A1S3CD20|A0A1S3CD20_CUCME (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B OS=Cucumis melo OX=3656 GN=LOC103499471 PE=4 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 3.3e-76 Identity = 142/143 (99.30%), Postives = 142/143 (99.30%), Query Frame = 0
BLAST of CsGy2G009980 vs. TrEMBL
Match: tr|A0A2P5FAV6|A0A2P5FAV6_9ROSA (GRIM-like OS=Trema orientalis OX=63057 GN=TorRG33x02_094280 PE=4 SV=1) HSP 1 Score: 282.0 bits (720), Expect = 7.7e-73 Identity = 134/143 (93.71%), Postives = 140/143 (97.90%), Query Frame = 0
BLAST of CsGy2G009980 vs. TrEMBL
Match: tr|A0A067KB62|A0A067KB62_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_12921 PE=4 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 1.0e-72 Identity = 135/143 (94.41%), Postives = 139/143 (97.20%), Query Frame = 0
BLAST of CsGy2G009980 vs. TrEMBL
Match: tr|A0A1R3JX20|A0A1R3JX20_COCAP (GRIM-19 protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_03869 PE=4 SV=1) HSP 1 Score: 280.8 bits (717), Expect = 1.7e-72 Identity = 135/143 (94.41%), Postives = 139/143 (97.20%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |