CsGy2G009980 (gene) Cucumber (Gy14) v2

NameCsGy2G009980
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B
LocationChr2 : 9677012 .. 9682529 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGGGCTTTCATGCGCCCGGGTTCCACTGTTTCCCTCTGTACTCTACACTTCAGCCTCTCCTTCATCTTTTTCAGGTTCTTTCGTTTTCGAAACCTCCCAATTCCCAAATCCCATTTCTCCATTACAGCCAACTCTTGCTTAATTCGTCCACTTGATCGTCGAAAAAGCTCTCTGAGATGACGGAAGCCGCGATTCGGAAGAAACCTGGCATGGCTAGCGTCAAAGATATGCCGATCCTCCAAGACGGGCCACCGCCGGGTGGATTCGCTCCGGTTCGCTACGCTCGCCGGATTCCCACTAAAGGCCCTAGCGCTATGGCCATTTTCCTTACTGCTTTTGGTGCATTCTCTTGGGGGATGTATCAGGTCGGCAAGGGCAACAAGATCCGAAGGTCTGTATTTTCTCCCCCATTATCTTAGTTTAGTCTATGGTATTTGCCTGTTTTATATCATTTTATCGGTAATGGAGTTAATTGGTTTATGTATCTGAGTGTCGTTTTTTCTGCGAACAGTGGGGCTAGTTTGATTGAGATTTAGTAGAGTTCTGGACCCAGAATTTTTGTTAGGGATTTGTTGAATTTTATTGAGATTGGAGATTCATGCTTTAGGTTGTTTTGAATTTTACCGTTTTGCTGCTTAGATGCGTTGGAGCGAATTTGTATTGAGACTTTAGGTTCGGTACCTGGATTTGATTCTGTATCAAGTCAATTGATTTAAAAAAATTAGCACTTTCTTTGCTACTTTGATTGAGGGTGGGTTGATGCATCTTCTCCCTTCCACTTTTTGCATTTCACTTTAAATCGACGAAGCTTAAGTTTCATACATCTTGTAAAATATCTTCAAATTTTCATTTACTTTTAGAAATTTTCCATGAAGCAATTAATAAGTTACTCATAATTAAACTAAGAATTAATACTCAAAACGACAGACAAAAAAAGCTCACATTCAGCAATGAAATGTTCACACCCAAGGAAAAGTTTTCTTTTTTCCAATACAACTAGAAGATTCAAGCCCACAAAAAGCCACTAGACAAAGGGTTTCCAACTGAGAATGATGTTGCCTGAGTCATAATTATAAAAGTCTTAAATACCAAAGAAACATGAAACCTCATCAGAGACCAAACCTCCCAGTTCCCTCTCCACACCGTGAAACAATCTATTGTTCCTCTCCTCTCAAAGATCCCTTAAAACCGCACATATCCTTGCCCAAAAAAGAAAACAAACACACTCTTTGAAAGGCGGATGGAGGAGGAACTCCCCAAATCATCAAGTGAACATCCCTTTCTAGCTAACAAGATATCCCTTTGGGTTCCTTTTTTTTCTTTTCTATATGCTCTTTTTTTTTTTCATTTTTTTCTCAATGGAAAGTTGGAAACAGTTGTTTCTATAAAAAAAATACAACTAGAAGATTCAATACTTGCAAAGTAACATTGTTCATTCATAAGAACTATCATGGACAATAAATTCTCCTTAATTTTATAGTACTACAATATTGTCCATTTAAAGTATAAATCCTCATTACTTTGTGATTTAGTAGAAATAGGATATTATGGTCAAATCCTTAATCTATTAGGATTAGGATTAGGATTAGGATTAGGATTAGTTTCTTTTATTTATTAAGATTAGGATTAGTTTCTTCTTTTATTAGGATTTGGATTAGTTTCTTTTATTAGGATTAGGATTAATTTCTTTTATTAGTATTAGGATTAGTTTCTTTTATTTATTAGGACGAAGGATTAGTTTCTTTTATTAATTAGGATGAGTATTAGTTTCGTTTATTAATTAGGATTAGGATTAGTTTGCTATAAATAGAGTACTTGTCTTCTTGTATTCACAACTTTTAAACATTAAAAAAAGTCTCTCAATTGGTTTACATCACTTAGCTTTTGATTTTGTCATAAATACCCCATACCATTGAAGATAGTTGTCCCATTTATACACATTATCTTTGAACAAGTGAGGGACTATCAAACTCACAACGCCAAATAATATGGTCCAGGTATCTTCTCCATTTCTGACTAAGAATACAACAGAAAGGACCAACTAGTGAGGGCAACTTCCTCTTGTGTTGATGCATCGTGTTAGAACAATGTAAAACTTAACAAGGAAAGAACCTCACTCTCGTGGGTATCTTAATCCTCCAAAGTCTAGAAAAAATTGACAGATCTGGAGACGAAAGATCAACCAAACTGAAAGAAAGATTTGCACAAGAATTCTGGCTTCTAAAAAGGAATACAACAAAAAGGACCAACTAGTGTGGGCAACTTCCTCTTCAGTCGATGGATCGTGTTAGCATGGCCGTGTAAAACTTACCAAGGAAAGAACCTCACTTTCTTGGGGATTTTAATCCTCCAAAGTACCGAAAAAACTGACAGATCTAGGTGAGAGGGATCAACCAAACTACGAAAGAAAGGCTTATACAAGAGCCCTTCAATGGATTGGGCCTTCAAACCTTGACTTTTCTACTCCCACGCCTAAAGGGGGGCCCTCAAGTTAGGAAAGTAGAAAGCATCATATCCATCACTTCCCTATTGGAAAGAGCGCGAATACCCCGAAAGACAAATAGCAAGAGTTCCCATGCACAAGAAAGTCAACAATAAAATGGTTCTTTAAGGAAGACAAATGATATAGACAAGGGAGCAAAGAAAAATAGGTCTCTCCCCCACCTAATCCTCTTGCCAATAATACTTGTCCCTTCCTTCCCCAGCCCACCACACACCGGACCAAATGAACAAAATAAATTATCTCTTGTGAAATATTCTTCTACAAGTGCTAGTGAGTACCTTTAACCCCCTCTAACAGCCACTCGAAAGGATGGAGGCCATGTTTAGTAACAATAACTCTATGCAAAAGAGAACTGGGCTCTAGGAGAAATGCCATAGCAATTTGACTACTAAAGCTTTGTTATGAGTGCTTAGATTCTCTAATTCTACCCTCTCCCCAGAAAAAGGCCACCTCTTATTTAATTAAGTGTGCTCCCTTCCCAGAAAAACCGCACATCAACCACCTCTCCAAACTCTTACAAACCTTGCACGTGGCTCTAGAAAGGAAGCAAACTCATATTCTCTAGAGCACACTGCTTGACTAATATATAGCTCAATCATGGATCTCCACATGACTACGTCGTTGAAGCTAATCAATATCCACTTGTTAACTTCCTAATGATTATAGCATCCGGTTAGGTACTTAGGTTTGGTGCATGTCTTTGATACCACTTGTTTGATGATGAATCTTCCTATACTTTTTTTTCTGGAAAGGGAATTGAACTCTTATTTAGAAAATGAAACGAGACTTAATGCTCCAAAGTACAATGACAAACCTTTCTATACTTTTACTATTCTATTATATTGTGCATTTTGGCCATAAGTCTTCTTAGATTTACTTTGGGTTTTACCCAATAGGACTTCACCTGGATATCTCAACTAGGTTGACACCCCATAACGACAATCATCCTAAAGGATAATTACAAAAAACCTTCAAAGTCAAAGCCCAATGAGAAACATGAAAACGAGCAAGAGACCATTTTCTCTAGCATCCCTCTCAGCCCTTCTAAACACTCTTCTATCCTCTCACCTCACAACACCCAAGTAATAGCACAAGCACAAGCACAAGCACGCATTTATTTAAGTTTAAGGTTTAATTTGATAAAATTAAAAGTTACATATTTAATTGGATTCATTTAGCCAAGAACAGGTAATAAAAGTAGACTTTTCCTATTTGACTGTTGCAAAAAGTGGTCATTTGAGGACTTCATAGGTGGACATAGATGTCGAGCAGTGGTTTTAGTCACTTCTATTCACCATAAGATAATTTCTTGGTAGTAAATTATACATGCATCCATTTAGTTTTCTAGGGAAGTTGAATGTAGTCAAGCAGATCATTTGAATTTCAACTTTAAACTACCACTTTTACTTGTCCATTTATTTAGTTTTTCATGGCACATTGTTCTCTCATTGAATTACTGCAAAAGCATCTTTAGAATGAAAGGTGCCTGTATTACATTGCTTCCAAAGGAAAAGTTAGTGTAGCTTCTTCGTACTTAGAACGTTTGTTTATGGGATTGATAGATAGTTAAAAGAATGGTGTTATCTGCTCCCCTTTGTTCCCATCTTTTCCCTTCACTCAAAGGAGATGAATGGGCTGACCACATGACACATTAAGACGAATCCAAGTATTACATTTAAAAGACGAGCATCTCATGGTTTCTTCTATGTTCCTTTCCATTTGGTTTGGGGATATGCTAAAGATGATGTCATGCTTTTCATTTGGCCATTGTTTCTTCCTATTTGTGGTTGGTTAGATTACCGTTATATATTTCTATTGTACACTATGAAGTTCACAATGAGGACACAAAGCATGTACAGCGCATTGGCCTAAAAATATAGTATTATATTTTACTTACCTTTGCAATCTCTTGTAGGGCACTGAAAGAAGAAAAATATGCAGCTCGGCGAGCAATATTGCCTGTGCTTCAAGCTGAGGAAGATGAAAGGTAAAATGGATGATTTTTTGTGTAGGCTGCCCTCAATCTTCCAGTAACACTGGTTGAAACTATTGGTTCCTTCAATGGCTTTAGAAAAGTTTTACATCATTTTCTTGTCTGTTCTCACTTTCTAGATTTGTCAAAGAGTGGAAGAGTTACCTCGAATATGAGGCTGAAGTTATGAAGGATGTGCCTGGTTGGAAAGTTGGTGAAAGTGTTTACAACTCCGGAAAATGGATGCCTCCAGCAACCGGTGAGCTACGACCCGAAGTCTGGTGATTTTGTTTCAAACAGATTCATTTGTGGTTGACATGTAGTTTGGTTTTGTATGCTTGCAACTTATCCTCACATGGGTTTCTTGATTTGCTGGTTCATGGCCCTCCTTATAAAAATAAAAGCATGTCAAAATTTCTTCAAATGTTTTGCAAATACTACTGCTAAAACTGTCTTCTTTACTCGGTGAACATCTCTTTCTACTCATGTATCTCACTAAAAAGTTGGGACTTGGAATTAGATGTGAATTTGTCTTCATTCTTTTTCACTTAATTGATATGGTAGCAGTGGCTTTTTGAGAGCAAAAGTGATTGTGGAGGGTTAAATTATAATTAAGTTTCAGCAAATATTTACCTTGTTTGTGGCTTGTGGCTATTGGAATAATTGTTGGAAAGTCGAATGGACTCTCTTGGTGTACACCAATTCTATTTGATAAGAGCAACATCGGTGTGTTTGGGGGAGGGAAAAGATTGCAACCCATTCCCTTCCTTGTTTGGGGATGAGTTATCACAACCCTTCCCCAAACTCCATCAACCCTGCCTTAATCCTCCCTTGATAATAATAATAATTTTCACAATCCTTCCTACACAACCCATCTTCCACTCAAATATTACCGTAATACTACCTATTATTTTCCTTTTCTCAAACACATACTATCATAACACTATCATTCATAATCTTGCTCTCTAATAACACTATCAATAATAAACATTCCACCAAACACATATTATCATAACATAGAATTATCATAATCATTTTTCTG

mRNA sequence

GTGGGCTTTCATGCGCCCGGGTTCCACTGTTTCCCTCTGTACTCTACACTTCAGCCTCTCCTTCATCTTTTTCAGGTTCTTTCGTTTTCGAAACCTCCCAATTCCCAAATCCCATTTCTCCATTACAGCCAACTCTTGCTTAATTCGTCCACTTGATCGTCGAAAAAGCTCTCTGAGATGACGGAAGCCGCGATTCGGAAGAAACCTGGCATGGCTAGCGTCAAAGATATGCCGATCCTCCAAGACGGGCCACCGCCGGGTGGATTCGCTCCGGTTCGCTACGCTCGCCGGATTCCCACTAAAGGCCCTAGCGCTATGGCCATTTTCCTTACTGCTTTTGGTGCATTCTCTTGGGGGATGTATCAGGTCGGCAAGGGCAACAAGATCCGAAGGGCACTGAAAGAAGAAAAATATGCAGCTCGGCGAGCAATATTGCCTGTGCTTCAAGCTGAGGAAGATGAAAGATTTGTCAAAGAGTGGAAGAGTTACCTCGAATATGAGGCTGAAGTTATGAAGGATGTGCCTGGTTGGAAAGTTGGTGAAAGTGTTTACAACTCCGGAAAATGGATGCCTCCAGCAACCGGTGAGCTACGACCCGAAGTCTGGTGATTTTGTTTCAAACAGATTCATTTGTGGTTGACATGTAGTTTGGTTTTGTATGCTTGCAACTTATCCTCACATGGGTTTCTTGATTTGCTGGTTCATGGCCCTCCTTATAAAAATAAAAGCATGTCAAAATTTCTTCAAATGTTTTGCAAATACTACTGCTAAAACTGTCTTCTTTACTCGGTGAACATCTCTTTCTACTCATGTATCTCACTAAAAAGTTGGGACTTGGAATTAGATGTGAATTTGTCTTCATTCTTTTTCACTTAATTGATATGGTAGCAGTGGCTTTTTGAGAGCAAAAGTGATTGTGGAGGGTTAAATTATAATTAAGTTTCAGCAAATATTTACCTTGTTTGTGGCTTGTGGCTATTGGAATAATTGTTGGAAAGTCGAATGGACTCTCTTGGTGTACACCAATTCTATTTGATAAGAGCAACATCGGTGTGTTTGGGGGAGGGAAAAGATTGCAACCCATTCCCTTCCTTGTTTGGGGATGAGTTATCACAACCCTTCCCCAAACTCCATCAACCCTGCCTTAATCCTCCCTTGATAATAATAATAATTTTCACAATCCTTCCTACACAACCCATCTTCCACTCAAATATTACCGTAATACTACCTATTATTTTCCTTTTCTCAAACACATACTATCATAACACTATCATTCATAATCTTGCTCTCTAATAACACTATCAATAATAAACATTCCACCAAACACATATTATCATAACATAGAATTATCATAATCATTTTTCTG

Coding sequence (CDS)

ATGACGGAAGCCGCGATTCGGAAGAAACCTGGCATGGCTAGCGTCAAAGATATGCCGATCCTCCAAGACGGGCCACCGCCGGGTGGATTCGCTCCGGTTCGCTACGCTCGCCGGATTCCCACTAAAGGCCCTAGCGCTATGGCCATTTTCCTTACTGCTTTTGGTGCATTCTCTTGGGGGATGTATCAGGTCGGCAAGGGCAACAAGATCCGAAGGGCACTGAAAGAAGAAAAATATGCAGCTCGGCGAGCAATATTGCCTGTGCTTCAAGCTGAGGAAGATGAAAGATTTGTCAAAGAGTGGAAGAGTTACCTCGAATATGAGGCTGAAGTTATGAAGGATGTGCCTGGTTGGAAAGTTGGTGAAAGTGTTTACAACTCCGGAAAATGGATGCCTCCAGCAACCGGTGAGCTACGACCCGAAGTCTGGTGA

Protein sequence

MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW
BLAST of CsGy2G009980 vs. NCBI nr
Match: XP_004147172.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucumis sativus] >KGN61547.1 hypothetical protein Csa_2G169710 [Cucumis sativus])

HSP 1 Score: 295.4 bits (755), Expect = 1.0e-76
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0

Query: 1   MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWG 60
           MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWG
Sbjct: 1   MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWG 60

Query: 61  MYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKV 120
           MYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKV
Sbjct: 61  MYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKV 120

Query: 121 GESVYNSGKWMPPATGELRPEVW 144
           GESVYNSGKWMPPATGELRPEVW
Sbjct: 121 GESVYNSGKWMPPATGELRPEVW 143

BLAST of CsGy2G009980 vs. NCBI nr
Match: XP_022959289.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucurbita moschata] >XP_023549201.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucurbita pepo subsp. pepo])

HSP 1 Score: 294.3 bits (752), Expect = 2.3e-76
Identity = 142/143 (99.30%), Postives = 143/143 (100.00%), Query Frame = 0

Query: 1   MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWG 60
           MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWG
Sbjct: 1   MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWG 60

Query: 61  MYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKV 120
           MYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKV
Sbjct: 61  MYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKV 120

Query: 121 GESVYNSGKWMPPATGELRPEVW 144
           GE+VYNSGKWMPPATGELRPEVW
Sbjct: 121 GENVYNSGKWMPPATGELRPEVW 143

BLAST of CsGy2G009980 vs. NCBI nr
Match: XP_023000560.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucurbita maxima])

HSP 1 Score: 294.3 bits (752), Expect = 2.3e-76
Identity = 142/143 (99.30%), Postives = 143/143 (100.00%), Query Frame = 0

Query: 1   MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWG 60
           MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWG
Sbjct: 1   MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWG 60

Query: 61  MYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKV 120
           MYQVGKGNKIRRALKEEKY+ARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKV
Sbjct: 61  MYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKV 120

Query: 121 GESVYNSGKWMPPATGELRPEVW 144
           GESVYNSGKWMPPATGELRPEVW
Sbjct: 121 GESVYNSGKWMPPATGELRPEVW 143

BLAST of CsGy2G009980 vs. NCBI nr
Match: XP_008460702.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucumis melo])

HSP 1 Score: 293.1 bits (749), Expect = 5.1e-76
Identity = 142/143 (99.30%), Postives = 142/143 (99.30%), Query Frame = 0

Query: 1   MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWG 60
           MTEAAIRKKPGMASVKDMPILQDGPPPGGF PVRYARRIPTKGPSAMAIFLTAFGAFSWG
Sbjct: 1   MTEAAIRKKPGMASVKDMPILQDGPPPGGFHPVRYARRIPTKGPSAMAIFLTAFGAFSWG 60

Query: 61  MYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKV 120
           MYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKV
Sbjct: 61  MYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKV 120

Query: 121 GESVYNSGKWMPPATGELRPEVW 144
           GESVYNSGKWMPPATGELRPEVW
Sbjct: 121 GESVYNSGKWMPPATGELRPEVW 143

BLAST of CsGy2G009980 vs. NCBI nr
Match: XP_023514672.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 293.1 bits (749), Expect = 5.1e-76
Identity = 141/143 (98.60%), Postives = 143/143 (100.00%), Query Frame = 0

Query: 1   MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWG 60
           MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWG
Sbjct: 1   MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWG 60

Query: 61  MYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKV 120
           MYQVGKGNKIRRALKEEKY+ARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKV
Sbjct: 61  MYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKV 120

Query: 121 GESVYNSGKWMPPATGELRPEVW 144
           GE+VYNSGKWMPPATGELRPEVW
Sbjct: 121 GENVYNSGKWMPPATGELRPEVW 143

BLAST of CsGy2G009980 vs. TAIR10
Match: AT2G33220.1 (GRIM-19 protein)

HSP 1 Score: 269.6 bits (688), Expect = 1.1e-72
Identity = 127/143 (88.81%), Postives = 135/143 (94.41%), Query Frame = 0

Query: 1   MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWG 60
           MTEA IRKKPGMASVKDMP+LQDGPPPGGFAPVRYARRI   GPSAMAIFLT  GAF+WG
Sbjct: 1   MTEAMIRKKPGMASVKDMPLLQDGPPPGGFAPVRYARRISNTGPSAMAIFLTVSGAFAWG 60

Query: 61  MYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKV 120
           MYQVG+GNKIRRALKEEKYAARRAILP+LQAEEDERFV EWK YLEYEA+VMKDVPGWKV
Sbjct: 61  MYQVGQGNKIRRALKEEKYAARRAILPILQAEEDERFVSEWKKYLEYEADVMKDVPGWKV 120

Query: 121 GESVYNSGKWMPPATGELRPEVW 144
           GE+VYNSG+WMPPATGELRP+VW
Sbjct: 121 GENVYNSGRWMPPATGELRPDVW 143

BLAST of CsGy2G009980 vs. TAIR10
Match: AT1G04630.1 (GRIM-19 protein)

HSP 1 Score: 263.1 bits (671), Expect = 1.0e-70
Identity = 123/143 (86.01%), Postives = 132/143 (92.31%), Query Frame = 0

Query: 1   MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWG 60
           MTEA IR KPGMASVKDMP+LQDGPPPGGFAPVRYARRI   GPSAMA+FL   GAF+WG
Sbjct: 1   MTEAMIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRISNTGPSAMAMFLAVSGAFAWG 60

Query: 61  MYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKV 120
           MYQVG+GNKIRRALKEEKYAARR ILP+LQAEEDERFV EWK YLEYEA+VMKDVPGWKV
Sbjct: 61  MYQVGQGNKIRRALKEEKYAARRTILPILQAEEDERFVSEWKKYLEYEADVMKDVPGWKV 120

Query: 121 GESVYNSGKWMPPATGELRPEVW 144
           GE+VYNSG+WMPPATGELRP+VW
Sbjct: 121 GENVYNSGRWMPPATGELRPDVW 143

BLAST of CsGy2G009980 vs. Swiss-Prot
Match: sp|O49313|NDADB_ARATH (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B OS=Arabidopsis thaliana OX=3702 GN=At2g33220 PE=2 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 2.0e-71
Identity = 127/143 (88.81%), Postives = 135/143 (94.41%), Query Frame = 0

Query: 1   MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWG 60
           MTEA IRKKPGMASVKDMP+LQDGPPPGGFAPVRYARRI   GPSAMAIFLT  GAF+WG
Sbjct: 1   MTEAMIRKKPGMASVKDMPLLQDGPPPGGFAPVRYARRISNTGPSAMAIFLTVSGAFAWG 60

Query: 61  MYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKV 120
           MYQVG+GNKIRRALKEEKYAARRAILP+LQAEEDERFV EWK YLEYEA+VMKDVPGWKV
Sbjct: 61  MYQVGQGNKIRRALKEEKYAARRAILPILQAEEDERFVSEWKKYLEYEADVMKDVPGWKV 120

Query: 121 GESVYNSGKWMPPATGELRPEVW 144
           GE+VYNSG+WMPPATGELRP+VW
Sbjct: 121 GENVYNSGRWMPPATGELRPDVW 143

BLAST of CsGy2G009980 vs. Swiss-Prot
Match: sp|Q8RWA7|NDADA_ARATH (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-A OS=Arabidopsis thaliana OX=3702 GN=MEE4 PE=2 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 1.8e-69
Identity = 123/143 (86.01%), Postives = 132/143 (92.31%), Query Frame = 0

Query: 1   MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWG 60
           MTEA IR KPGMASVKDMP+LQDGPPPGGFAPVRYARRI   GPSAMA+FL   GAF+WG
Sbjct: 1   MTEAMIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRISNTGPSAMAMFLAVSGAFAWG 60

Query: 61  MYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKV 120
           MYQVG+GNKIRRALKEEKYAARR ILP+LQAEEDERFV EWK YLEYEA+VMKDVPGWKV
Sbjct: 61  MYQVGQGNKIRRALKEEKYAARRTILPILQAEEDERFVSEWKKYLEYEADVMKDVPGWKV 120

Query: 121 GESVYNSGKWMPPATGELRPEVW 144
           GE+VYNSG+WMPPATGELRP+VW
Sbjct: 121 GENVYNSGRWMPPATGELRPDVW 143

BLAST of CsGy2G009980 vs. Swiss-Prot
Match: sp|Q95KV7|NDUAD_BOVIN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Bos taurus OX=9913 GN=NDUFA13 PE=1 SV=3)

HSP 1 Score: 114.8 bits (286), Expect = 8.1e-25
Identity = 55/119 (46.22%), Postives = 80/119 (67.23%), Query Frame = 0

Query: 20  ILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKY 79
           + QD PP GG+ P+ Y R +P +G S  ++F    GA  +G + + K N+ RR L+ E +
Sbjct: 6   VKQDMPPVGGYGPIDYKRNLPRRGLSGYSMFAVGIGALLFGYWSMMKWNRERRRLQIEDF 65

Query: 80  AARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGEL 139
            AR A++P+LQAE+D R ++  +  LE EA VMKDVPGWKVGESV+++ +W+ P  GEL
Sbjct: 66  EARIALMPLLQAEKDRRVLQMLRENLEEEATVMKDVPGWKVGESVFHTTRWVTPMMGEL 124

BLAST of CsGy2G009980 vs. Swiss-Prot
Match: sp|Q0MQ89|NDUAD_GORGO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Gorilla gorilla gorilla OX=9595 GN=NDUFA13 PE=2 SV=3)

HSP 1 Score: 113.6 bits (283), Expect = 1.8e-24
Identity = 54/119 (45.38%), Postives = 78/119 (65.55%), Query Frame = 0

Query: 20  ILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKY 79
           + QD PPPGG+ P+ Y R +P +G S  ++     G   +G + + K N+ RR L+ E +
Sbjct: 6   VKQDMPPPGGYGPIDYKRNLPRRGLSGYSMLAIGIGTLIYGHWSIMKWNRERRRLQIEDF 65

Query: 80  AARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGEL 139
            AR A+LP+LQAE D R ++  +  LE EA +MKDVP WKVGESV+++ +W+PP  GEL
Sbjct: 66  EARIALLPLLQAETDRRTLQMLRENLEEEAIIMKDVPDWKVGESVFHTTRWVPPLIGEL 124

BLAST of CsGy2G009980 vs. Swiss-Prot
Match: sp|Q9P0J0|NDUAD_HUMAN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Homo sapiens OX=9606 GN=NDUFA13 PE=1 SV=3)

HSP 1 Score: 113.6 bits (283), Expect = 1.8e-24
Identity = 54/119 (45.38%), Postives = 78/119 (65.55%), Query Frame = 0

Query: 20  ILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKY 79
           + QD PPPGG+ P+ Y R +P +G S  ++     G   +G + + K N+ RR L+ E +
Sbjct: 6   VKQDMPPPGGYGPIDYKRNLPRRGLSGYSMLAIGIGTLIYGHWSIMKWNRERRRLQIEDF 65

Query: 80  AARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGEL 139
            AR A+LP+LQAE D R ++  +  LE EA +MKDVP WKVGESV+++ +W+PP  GEL
Sbjct: 66  EARIALLPLLQAETDRRTLQMLRENLEEEAIIMKDVPDWKVGESVFHTTRWVPPLIGEL 124

BLAST of CsGy2G009980 vs. TrEMBL
Match: tr|A0A0A0LLE8|A0A0A0LLE8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G169710 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 6.7e-77
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0

Query: 1   MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWG 60
           MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWG
Sbjct: 1   MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWG 60

Query: 61  MYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKV 120
           MYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKV
Sbjct: 61  MYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKV 120

Query: 121 GESVYNSGKWMPPATGELRPEVW 144
           GESVYNSGKWMPPATGELRPEVW
Sbjct: 121 GESVYNSGKWMPPATGELRPEVW 143

BLAST of CsGy2G009980 vs. TrEMBL
Match: tr|A0A1S3CD20|A0A1S3CD20_CUCME (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B OS=Cucumis melo OX=3656 GN=LOC103499471 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 3.3e-76
Identity = 142/143 (99.30%), Postives = 142/143 (99.30%), Query Frame = 0

Query: 1   MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWG 60
           MTEAAIRKKPGMASVKDMPILQDGPPPGGF PVRYARRIPTKGPSAMAIFLTAFGAFSWG
Sbjct: 1   MTEAAIRKKPGMASVKDMPILQDGPPPGGFHPVRYARRIPTKGPSAMAIFLTAFGAFSWG 60

Query: 61  MYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKV 120
           MYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKV
Sbjct: 61  MYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKV 120

Query: 121 GESVYNSGKWMPPATGELRPEVW 144
           GESVYNSGKWMPPATGELRPEVW
Sbjct: 121 GESVYNSGKWMPPATGELRPEVW 143

BLAST of CsGy2G009980 vs. TrEMBL
Match: tr|A0A2P5FAV6|A0A2P5FAV6_9ROSA (GRIM-like OS=Trema orientalis OX=63057 GN=TorRG33x02_094280 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 7.7e-73
Identity = 134/143 (93.71%), Postives = 140/143 (97.90%), Query Frame = 0

Query: 1   MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWG 60
           MTEA IRKKPGMASVKDMP+LQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWG
Sbjct: 1   MTEAMIRKKPGMASVKDMPVLQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWG 60

Query: 61  MYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKV 120
           MYQVG+GNKIRRALKEEKYAAR AILPVLQAEEDERFV+EWK YLEYEAEVMKDVPGWKV
Sbjct: 61  MYQVGQGNKIRRALKEEKYAARSAILPVLQAEEDERFVQEWKKYLEYEAEVMKDVPGWKV 120

Query: 121 GESVYNSGKWMPPATGELRPEVW 144
           GESVY+SG+WMPPATGELRP+VW
Sbjct: 121 GESVYHSGRWMPPATGELRPDVW 143

BLAST of CsGy2G009980 vs. TrEMBL
Match: tr|A0A067KB62|A0A067KB62_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_12921 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.0e-72
Identity = 135/143 (94.41%), Postives = 139/143 (97.20%), Query Frame = 0

Query: 1   MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWG 60
           MTEA IRKKPGMASV+DMPILQDGPPPGGF PVRYARRIPTKGPSAMAIFLTAFG FS+G
Sbjct: 1   MTEAVIRKKPGMASVRDMPILQDGPPPGGFPPVRYARRIPTKGPSAMAIFLTAFGVFSYG 60

Query: 61  MYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKV 120
           MYQVG+GNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWK YLEYEAEVMKDVPGWKV
Sbjct: 61  MYQVGQGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKKYLEYEAEVMKDVPGWKV 120

Query: 121 GESVYNSGKWMPPATGELRPEVW 144
           GE+VYNSGKWMPPATGELRPEVW
Sbjct: 121 GENVYNSGKWMPPATGELRPEVW 143

BLAST of CsGy2G009980 vs. TrEMBL
Match: tr|A0A1R3JX20|A0A1R3JX20_COCAP (GRIM-19 protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_03869 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.7e-72
Identity = 135/143 (94.41%), Postives = 139/143 (97.20%), Query Frame = 0

Query: 1   MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWG 60
           MTE+ IRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIP KGPSA+AIFL AFGAFS+G
Sbjct: 1   MTESMIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPNKGPSAVAIFLAAFGAFSYG 60

Query: 61  MYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKV 120
           MYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWK YLEYEAEVMKDVPGWKV
Sbjct: 61  MYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKKYLEYEAEVMKDVPGWKV 120

Query: 121 GESVYNSGKWMPPATGELRPEVW 144
           GESVYNSG+WMPPATGELRPEVW
Sbjct: 121 GESVYNSGRWMPPATGELRPEVW 143

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004147172.11.0e-76100.00PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucu... [more]
XP_022959289.12.3e-7699.30NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucurbita mosch... [more]
XP_023000560.12.3e-7699.30NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucurbita maxim... [more]
XP_008460702.15.1e-7699.30PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucu... [more]
XP_023514672.15.1e-7698.60NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B-like [Cucurbita ... [more]
Match NameE-valueIdentityDescription
AT2G33220.11.1e-7288.81GRIM-19 protein[more]
AT1G04630.11.0e-7086.01GRIM-19 protein[more]
Match NameE-valueIdentityDescription
sp|O49313|NDADB_ARATH2.0e-7188.81NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B OS=Arabidopsis t... [more]
sp|Q8RWA7|NDADA_ARATH1.8e-6986.01NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-A OS=Arabidopsis t... [more]
sp|Q95KV7|NDUAD_BOVIN8.1e-2546.22NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Bos taurus OX=9... [more]
sp|Q0MQ89|NDUAD_GORGO1.8e-2445.38NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Gorilla gorilla... [more]
sp|Q9P0J0|NDUAD_HUMAN1.8e-2445.38NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Homo sapiens OX... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0LLE8|A0A0A0LLE8_CUCSA6.7e-77100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G169710 PE=4 SV=1[more]
tr|A0A1S3CD20|A0A1S3CD20_CUCME3.3e-7699.30NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B OS=Cucumis melo ... [more]
tr|A0A2P5FAV6|A0A2P5FAV6_9ROSA7.7e-7393.71GRIM-like OS=Trema orientalis OX=63057 GN=TorRG33x02_094280 PE=4 SV=1[more]
tr|A0A067KB62|A0A067KB62_JATCU1.0e-7294.41Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_12921 PE=4 SV=1[more]
tr|A0A1R3JX20|A0A1R3JX20_COCAP1.7e-7294.41GRIM-19 protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_03869 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009346GRIM-19
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G009980.1CsGy2G009980.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009346GRIM-19PFAMPF06212GRIM-19coord: 20..138
e-value: 7.0E-42
score: 142.4
IPR009346GRIM-19PANTHERPTHR12966NADH DEHYDROGENASE UBIQUINONE 1 ALPHA SUBCOMPLEX SUBUNIT 13coord: 18..141

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy2G009980Cucumber (Gy14) v2cgybcgybB045
CsGy2G009980Cucumber (Gy14) v2cgybcgybB052
CsGy2G009980Cucurbita maxima (Rimu)cgybcmaB188
CsGy2G009980Cucurbita maxima (Rimu)cgybcmaB226
CsGy2G009980Cucurbita maxima (Rimu)cgybcmaB262
CsGy2G009980Cucurbita moschata (Rifu)cgybcmoB181
CsGy2G009980Cucurbita moschata (Rifu)cgybcmoB186
CsGy2G009980Cucurbita moschata (Rifu)cgybcmoB219
CsGy2G009980Cucurbita moschata (Rifu)cgybcmoB247
CsGy2G009980Cucurbita pepo (Zucchini)cgybcpeB231
CsGy2G009980Cucurbita pepo (Zucchini)cgybcpeB249
CsGy2G009980Cucurbita pepo (Zucchini)cgybcpeB278
CsGy2G009980Cucumber (Chinese Long) v2cgybcuB065
CsGy2G009980Bottle gourd (USVL1VR-Ls)cgyblsiB115
CsGy2G009980Bottle gourd (USVL1VR-Ls)cgyblsiB117
CsGy2G009980Melon (DHL92) v3.5.1cgybmeB109
CsGy2G009980Melon (DHL92) v3.5.1cgybmeB126
CsGy2G009980Melon (DHL92) v3.6.1cgybmedB107
CsGy2G009980Melon (DHL92) v3.6.1cgybmedB124
CsGy2G009980Watermelon (Charleston Gray)cgybwcgB129
CsGy2G009980Watermelon (Charleston Gray)cgybwcgB149
CsGy2G009980Watermelon (97103) v1cgybwmB114
CsGy2G009980Watermelon (97103) v1cgybwmB117
CsGy2G009980Wild cucumber (PI 183967)cgybcpiB066
CsGy2G009980Silver-seed gourdcarcgybB0250
CsGy2G009980Silver-seed gourdcarcgybB0770
CsGy2G009980Silver-seed gourdcarcgybB0945
CsGy2G009980Cucumber (Chinese Long) v3cgybcucB070
CsGy2G009980Cucumber (Chinese Long) v3cgybcucB076
CsGy2G009980Watermelon (97103) v2cgybwmbB124
CsGy2G009980Watermelon (97103) v2cgybwmbB148
CsGy2G009980Wax gourdcgybwgoB117
CsGy2G009980Wax gourdcgybwgoB141