CsGy2G008750 (gene) Cucumber (Gy14) v2

Overview
NameCsGy2G008750
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionX-linked retinitis pigmentosa GTPase regulator-like isoform X1
LocationChr2 : 7851258 .. 7855651 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCCAGAAAGATGTTAGCATGTCCTGTTTAGTTGGGCCTTAGCTTATTTTGTATTTTGTCAGGAAGTAGTGTAAAAGAAAAAAATATGAATGATTGTAGACATGGCCCACGTTAATGAACTTTCAGCTATTTTTAGTTTTACTTTTTGAACTCTACTTTGAGTGCACTTCTGATCATTAACTAGAAATATTTTGGTAGGTGCAAGAGCTGACTTGTAAATCCAAAAATCTTGAAGCTGAACTCGAGAAGACCTCAAAGAAGTTGTTGGAGGTTACTGCAATAGCTGCAGATGAAGCTGAAAAATGCAAATCAGCCAAGGAAGTTATTAAATCCCTTGCGGCTCAGGTTAGTCTTTTTTATTTATGGGTTAGATTTTGTAAGAACATTTCTATTATATTTTCTAACCGTTGTTAAATCATTTTCTATATCTTTCCATTATATTCATTCCCACTTTTACTTATAACGTCAATTGTCAAATATATATGGTCAGAAGTAGTAAGGAAAAGAGCTGTTATTCAGTCAGCTTCCTTTATAATTTTTGGTGATATAAATTTAAATTTGCCGTCAACCATCAGTTTAAGCTTTTGGGTGAACTAGCGATTTAATATGGTATTAGAGCAGGAAGTCTAGGGCGGTTCCATCAAAACTTATCACTGCCACTGTCATCTTCTCCATATCGGTCAGCTCATGAATCTTAAAGTACCGATCTTCCCGAAACAACCAGGAGTCAGGGTTAGTTCTATTAAAAACCGGCATTTCTACTTTCTTAAATTTGCTCCGTCTGCCGATTTTTCTTCCTCAACCTTTCCGACTTGCTTCGATCCATCGGATGTACCCGAAATGTCCGTTTCCTTGCTCTTAGCTTGACTCACGGCACCTTCTGCCTTCTTTCCGGCCGAAATATCCTCACGCACAATGCCCTCAATATACTTTATAATTATCTGTTGTTGTTGATATTGTTGGTTGATTTGAATATTCATCTCTTGAATACTCTTCGATATCAACGATATGTTCTCTTCCATTATCGGCATTCGTTGAAGCTCACGTTCTACTGCTTCAATTCTCTCTTCCAATTTCCTTGCCATGACTGCTCGGTTGCCCAGATGAGAGCTCTGATACCAATTTGTAAAGATACTACAAATATATCTTTATATATATATTGTTTTACCTCAACCGATACAATATAAAATTCCAGAACCAGACAATATAGAACTTAGAAGTAACTTGAAAATTCCAGTTCACAGCAGAACAGCAATCAACGTCAAAATGACAACCAAAACGTAAAAGGTAATCACAATACTATAAACCTAAAATCAAGACCCAACAACAAAAACCTGGACCCCTCTGCCTTTTTCCCTCGCACGGGAATGCAGCCTCTTCTTCTTTTCTTCCCAACCCCTTTTTCTCTCTCCATCATCTTCTATTTATTCTAACTAACTAGTGGGTCCCACAGAGGGCTGGTCCCGCTCTTATTCCTCTCCCAGTGTTCCACGTGGAATTATGTTTTTCCCTTTTTTCTTCCTACTATAAGTAATAAGTATAGGGGGTCTAGCACACTCCAATACAGCTAGATCAACACAGGAAGTCATAGACAGATATCTGTCAATCTTCAACGCCTAGCCTGCTTAGCAACATTATTAGCCACAAATTATGACAATGAGAAACGTGTATGAAAGAAATGAAATGAAAATGCTTAGACATATCCCTGGTTTCTCCAGTCCAACGCCCAGCCTCACTTAGGGACTGAGTTTTGCTAGAAATCAAATTAATCACCTGCAAACATTCAACTAACAATTTTTTGCATGAACTTGATGTTATCAGTTGAATCCCCTCAAGGATTGCAAGAATTTCGGCCATGTTAGCTTCCAAATCCACATAAAAAAAATGAACCGTCACCTTCAAATCATCATCAGAATTTCGGATAATAGCCCTTGGACCCAGTGGATGGAGGAACAGAGTTCCAAGCCACATCGACATTCAACTTTAAGAAGCAGACGAATGGACTGCATTTCTTTGAGGAGGTACCAGACAAACGAGGACCCACTTCCCACTTTTGGATCAAAGTAAGGAGTTCAAGTTTCTAAAATACTTTAGGACCCATTTGCTATTCACGATATGATCTGGAGTTAGATTATTCAATCAATAACTATTCCTATTCGATCAGATTGCCCAACATAAAATAGCAATAATGCCCAACTCATTTTTTGAATGGATTGAATTTAGAGCCATCCATCAAGGGGTTTATAGAGATCAGGTGCAGACCAGCTTTGCATGGGTACACCAAGCACATTTAAGACTTCTTAACTTCCTAATAAAGTTGACACTTTACCATTTTTCATTAACTCTCACGTCTCACCAAGTGGACAGGAAGCCATAAAGGATGGATGGGTCAGCCACATATTCTTAAAGAAGTAATTGATGAATGAAAACCAAGTTTCATGCAGTAAATTTGGAAGTAGAAAAAGAATTATATTCCTTCACTAATAAAAGTAATACACTATGTCTTATCATGTTAAATTTTATTAGGGTATAGTTGATATTAGCTTCAAAGTTTACCAGTAGATGGTTATAAAGAATGGGGGAAGGAAGCAATTGTTTAGTTGTTTAGGCTTAAGTTTACTCAAGAGAGGGTCAAAATTACTTGGAATATTTTACTGTCAGTTTCTTCATCTAAATACTAGTTCTTTTTAAATCTTTCGTTCTCATCTCAATTACAAGAAAGAAAAGACTAAATACATATTTCCAAAGACCATCTGGAGGGTAGTCATATGTTGAAGATCCATAAGTTCACTTTTACCATTAAATCTACAGATTCATTAATGTCATCATATGAGTGTTAATTTGAAGAATTTATCAGTCTTTAATATTTTAGTTAATATTTATGCATGACTTCTATTCTCTCCCTTAATTGTTTTGCAGTTAAAAGAGATGGCTGAGAAAATGCCAGAGGGACAAACTGCTATTGTTAACTCTAGCACTGTTACTGGGCAAAATGGTAGTAATTTGAACCAGCTTTCCACCGAGAGCCTTTCAATGAGCATAAACTCTCGTTTGGAGTCGAATGGCATTTCAAAAGGTCAAACCTTATCAACTGGAATCAAAGCACTAAATGAGAAGGCAGAATGGGTTGTACAAGACGAACCAGGCGTGTACATAACTTTGTCCACTTTGCCTGGAGGATTCAATGAGCTGAAACGAGTTCGTTTCAGGTACTAAATTTAGGCCATTTTTTGCGAAAATTTATTGAGTGCTTACATGACATTAAATTTTACTTGTTTCATCCTCCCACTGTATAGTATGATGGCTTTATCATTAATCCATATCTTTCTAGTGCTGATTGTTGGAATTCTTAGCTCATCGTAATCCCCTTAACTTGATACTTTGGTTGACACCTTATGCTATAGGCTTTTGATAAAATGTAAGGTTTACTTGGCAACTGTTTGTAATGTATTCACATATAATTGGCTTTGTGATAGGAGACCGTTATTGTGTAGGTTAAAGTTATACCCTCTCCTTGATTTCATGTTTACTTCTGAAAAGTATTTTTAGAAGAAAAATAAATTTAATTTACAATGGTAATAAGGGGTGTTTACATACTCCCAACTACCTATAGGTGTACTAAAAGATCGGTGTTTTGATTGCGTTATGAAAGATTGTTGTCAAGGATTTAATGAAAAAATCTAAATTCACTTTAGCTTAATAGTTTTAACTTTAGAGTTTAATAGCGATCTATAATATAATTCAGTTCAAATCTAGTCTCATTTCAATTTAGAGTATTGAAAATATATTCAAAAGATTAAATTTACTCTAAACTATTCGACCTATTAGGCTTTTTAGTCCAGTGACATATTATGTTATTATAGAAATATTTCTTCATTTAGGAGTATATCCGAAGGTGCGAAAACTAAGTTTATACTAACCTGCTGTTTGAGATTAACATAAGATTTCAAATATCTTCTTAACACATGTTATTTTTTTCTTTTCTTGAACTTGTTCACAGACCTGTTTGGCCTGTCAGTATGAAAGTTCGTTAGGTTCAATTTAAAGTCGATAGTGTCACTGATTTAAAATCATTTTTTTAGTGGCCAATAGGCTCTCCCCCTCCCACCCTCTCTTATCAACTTAAAATTTGTCTAGCTAAAGGCACCTATATATACAAAATTAATCAGCCCTGATTGTGATTACATATATTCAAAAGTGGTATTGTTGCTATTTTATGCTACCAACAATTTCATTTATGAGTTAGCCAGCAAAGAAAAGCGTATTCTTAGTTTCCCTGTATTTCATTGTGTTGCAGTCGAAGACATTTTACAGAAGCACAAGCAGAGAAATGGTGGGCGGATTTCGGAGCCAAGGTATGCGAGCGGCACAAAGTAAAGAGTACTGATTAA

mRNA sequence

ATGAGCCAGAAAGATGTGCAAGAGCTGACTTGTAAATCCAAAAATCTTGAAGCTGAACTCGAGAAGACCTCAAAGAAGTTGTTGGAGGTTACTGCAATAGCTGCAGATGAAGCTGAAAAATGCAAATCAGCCAAGGAAGTTATTAAATCCCTTGCGGCTCAGTTGAATCCCCTCAAGGATTGCAAGAATTTCGGCCATGTTAGCTTCCAAATCCACATAAAAAAAATGAACCGTCACCTTCAAATCATCATCAGAATTTCGGATAATAGCCCTTGGACCCAGTGGATGGAGGAACAGAGTTCCAAGCCACATCGACATTCAACTTTAAGAAGCAGACGAATGGACTGCATTTCTTTGAGGAGGTACCAGACAAACGAGGACCCACTTCCCACTTTTGGATCAAAAGCCATCCATCAAGGGGTTTATAGAGATCAGGTGCAGACCAGCTTTGCATGGTTAAAAGAGATGGCTGAGAAAATGCCAGAGGGACAAACTGCTATTGTTAACTCTAGCACTGTTACTGGGCAAAATGGTAGTAATTTGAACCAGCTTTCCACCGAGAGCCTTTCAATGAGCATAAACTCTCGTTTGGAGTCGAATGGCATTTCAAAAGGTCAAACCTTATCAACTGGAATCAAAGCACTAAATGAGAAGGCAGAATGGGTTGTACAAGACGAACCAGGCGTGTACATAACTTTGTCCACTTTGCCTGGAGGATTCAATGAGCTGAAACGAGTTCGTTTCAGTCGAAGACATTTTACAGAAGCACAAGCAGAGAAATGGTGGGCGGATTTCGGAGCCAAGGTATGCGAGCGGCACAAAGTAAAGAGTACTGATTAA

Coding sequence (CDS)

ATGAGCCAGAAAGATGTGCAAGAGCTGACTTGTAAATCCAAAAATCTTGAAGCTGAACTCGAGAAGACCTCAAAGAAGTTGTTGGAGGTTACTGCAATAGCTGCAGATGAAGCTGAAAAATGCAAATCAGCCAAGGAAGTTATTAAATCCCTTGCGGCTCAGTTGAATCCCCTCAAGGATTGCAAGAATTTCGGCCATGTTAGCTTCCAAATCCACATAAAAAAAATGAACCGTCACCTTCAAATCATCATCAGAATTTCGGATAATAGCCCTTGGACCCAGTGGATGGAGGAACAGAGTTCCAAGCCACATCGACATTCAACTTTAAGAAGCAGACGAATGGACTGCATTTCTTTGAGGAGGTACCAGACAAACGAGGACCCACTTCCCACTTTTGGATCAAAAGCCATCCATCAAGGGGTTTATAGAGATCAGGTGCAGACCAGCTTTGCATGGTTAAAAGAGATGGCTGAGAAAATGCCAGAGGGACAAACTGCTATTGTTAACTCTAGCACTGTTACTGGGCAAAATGGTAGTAATTTGAACCAGCTTTCCACCGAGAGCCTTTCAATGAGCATAAACTCTCGTTTGGAGTCGAATGGCATTTCAAAAGGTCAAACCTTATCAACTGGAATCAAAGCACTAAATGAGAAGGCAGAATGGGTTGTACAAGACGAACCAGGCGTGTACATAACTTTGTCCACTTTGCCTGGAGGATTCAATGAGCTGAAACGAGTTCGTTTCAGTCGAAGACATTTTACAGAAGCACAAGCAGAGAAATGGTGGGCGGATTTCGGAGCCAAGGTATGCGAGCGGCACAAAGTAAAGAGTACTGATTAA

Protein sequence

MSQKDVQELTCKSKNLEAELEKTSKKLLEVTAIAADEAEKCKSAKEVIKSLAAQLNPLKDCKNFGHVSFQIHIKKMNRHLQIIIRISDNSPWTQWMEEQSSKPHRHSTLRSRRMDCISLRRYQTNEDPLPTFGSKAIHQGVYRDQVQTSFAWLKEMAEKMPEGQTAIVNSSTVTGQNGSNLNQLSTESLSMSINSRLESNGISKGQTLSTGIKALNEKAEWVVQDEPGVYITLSTLPGGFNELKRVRFSRRHFTEAQAEKWWADFGAKVCERHKVKSTD
Homology
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BLAST of CsGy2G008750 vs. NCBI nr
Match: KGN61396.1 (hypothetical protein Csa_2G110220 [Cucumis sativus])

HSP 1 Score: 293.9 bits (751), Expect = 5.8e-76
Identity = 176/274 (64.23%), Postives = 176/274 (64.23%), Query Frame = 0 

Query: 6   VQELTCKSKNLEAELEKTSKKLLEVTAIAADEAEKCKSAKEVIKSLAAQLNPLKDCKNFG 65
           VQELTCKSKNLEAELEKTSKKLLEVTAIAADEAEKCKSAKEVIKSLAAQ           
Sbjct: 4   VQELTCKSKNLEAELEKTSKKLLEVTAIAADEAEKCKSAKEVIKSLAAQ----------- 63

Query: 66  HVSFQIHIKKMNRHLQIIIRISDNSPWTQWMEEQSSKPHRHSTLRSRRMDCISLRRYQTN 125
                                                                       
Sbjct: 64  ------------------------------------------------------------ 123

Query: 126 EDPLPTFGSKAIHQGVYRDQVQTSFAWLKEMAEKMPEGQTAIVNSSTVTGQNGSNLNQLS 185
                                      LKEMAEKMPEGQTAIVNSSTVTGQNGSNLNQLS
Sbjct: 124 ---------------------------LKEMAEKMPEGQTAIVNSSTVTGQNGSNLNQLS 179

Query: 186 TESLSMSINSRLESNGISKGQTLSTGIKALNEKAEWVVQDEPGVYITLSTLPGGFNELKR 245
           TESLSMSINSRLESNGISKGQTLSTGIKALNEKAEWVVQDEPGVYITLSTLPGGFNELKR
Sbjct: 184 TESLSMSINSRLESNGISKGQTLSTGIKALNEKAEWVVQDEPGVYITLSTLPGGFNELKR 179

Query: 246 VRFSRRHFTEAQAEKWWADFGAKVCERHKVKSTD 280
           VRFSRRHFTEAQAEKWWADFGAKVCERHKVKSTD
Sbjct: 244 VRFSRRHFTEAQAEKWWADFGAKVCERHKVKSTD 179

[Close]
BLAST of CsGy2G008750 vs. NCBI nr
Match: XP_008441692.1 (PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like isoform X1 [Cucumis melo])

HSP 1 Score: 280.8 bits (717), Expect = 5.1e-72
Identity = 168/274 (61.31%), Postives = 172/274 (62.77%), Query Frame = 0 

Query: 6   VQELTCKSKNLEAELEKTSKKLLEVTAIAADEAEKCKSAKEVIKSLAAQLNPLKDCKNFG 65
           VQELTCKSKNLEAELEKTSKKL+EVTAIAADEAEKCKSAKEVIKSLAAQ           
Sbjct: 807 VQELTCKSKNLEAELEKTSKKLMEVTAIAADEAEKCKSAKEVIKSLAAQ----------- 866

Query: 66  HVSFQIHIKKMNRHLQIIIRISDNSPWTQWMEEQSSKPHRHSTLRSRRMDCISLRRYQTN 125
                                                                       
Sbjct: 867 ------------------------------------------------------------ 926

Query: 126 EDPLPTFGSKAIHQGVYRDQVQTSFAWLKEMAEKMPEGQTAIVNSSTVTGQNGSNLNQLS 185
                                      LKEMAEKMPE QTAIVNSSTV+GQNGSNLNQLS
Sbjct: 927 ---------------------------LKEMAEKMPEAQTAIVNSSTVSGQNGSNLNQLS 982

Query: 186 TESLSMSINSRLESNGISKGQTLSTGIKALNEKAEWVVQDEPGVYITLSTLPGGFNELKR 245
           TESLSMSINSRLESNGISK QTLSTGIK +NEKAEWVVQDEPGVYITLS LPGGFNELKR
Sbjct: 987 TESLSMSINSRLESNGISKSQTLSTGIKTVNEKAEWVVQDEPGVYITLSALPGGFNELKR 982

Query: 246 VRFSRRHFTEAQAEKWWADFGAKVCERHKVKSTD 280
           VRFSRRHFTEAQAEKWWA+FGAKVCERHKVKSTD
Sbjct: 1047 VRFSRRHFTEAQAEKWWAEFGAKVCERHKVKSTD 982

[Close]
BLAST of CsGy2G008750 vs. NCBI nr
Match: XP_008441694.1 (PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like isoform X3 [Cucumis melo])

HSP 1 Score: 280.8 bits (717), Expect = 5.1e-72
Identity = 168/274 (61.31%), Postives = 172/274 (62.77%), Query Frame = 0 

Query: 6   VQELTCKSKNLEAELEKTSKKLLEVTAIAADEAEKCKSAKEVIKSLAAQLNPLKDCKNFG 65
           VQELTCKSKNLEAELEKTSKKL+EVTAIAADEAEKCKSAKEVIKSLAAQ           
Sbjct: 665 VQELTCKSKNLEAELEKTSKKLMEVTAIAADEAEKCKSAKEVIKSLAAQ----------- 724

Query: 66  HVSFQIHIKKMNRHLQIIIRISDNSPWTQWMEEQSSKPHRHSTLRSRRMDCISLRRYQTN 125
                                                                       
Sbjct: 725 ------------------------------------------------------------ 784

Query: 126 EDPLPTFGSKAIHQGVYRDQVQTSFAWLKEMAEKMPEGQTAIVNSSTVTGQNGSNLNQLS 185
                                      LKEMAEKMPE QTAIVNSSTV+GQNGSNLNQLS
Sbjct: 785 ---------------------------LKEMAEKMPEAQTAIVNSSTVSGQNGSNLNQLS 840

Query: 186 TESLSMSINSRLESNGISKGQTLSTGIKALNEKAEWVVQDEPGVYITLSTLPGGFNELKR 245
           TESLSMSINSRLESNGISK QTLSTGIK +NEKAEWVVQDEPGVYITLS LPGGFNELKR
Sbjct: 845 TESLSMSINSRLESNGISKSQTLSTGIKTVNEKAEWVVQDEPGVYITLSALPGGFNELKR 840

Query: 246 VRFSRRHFTEAQAEKWWADFGAKVCERHKVKSTD 280
           VRFSRRHFTEAQAEKWWA+FGAKVCERHKVKSTD
Sbjct: 905 VRFSRRHFTEAQAEKWWAEFGAKVCERHKVKSTD 840

[Close]
BLAST of CsGy2G008750 vs. NCBI nr
Match: XP_016899470.1 (PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like isoform X4 [Cucumis melo])

HSP 1 Score: 280.8 bits (717), Expect = 5.1e-72
Identity = 168/274 (61.31%), Postives = 172/274 (62.77%), Query Frame = 0 

Query: 6   VQELTCKSKNLEAELEKTSKKLLEVTAIAADEAEKCKSAKEVIKSLAAQLNPLKDCKNFG 65
           VQELTCKSKNLEAELEKTSKKL+EVTAIAADEAEKCKSAKEVIKSLAAQ           
Sbjct: 663 VQELTCKSKNLEAELEKTSKKLMEVTAIAADEAEKCKSAKEVIKSLAAQ----------- 722

Query: 66  HVSFQIHIKKMNRHLQIIIRISDNSPWTQWMEEQSSKPHRHSTLRSRRMDCISLRRYQTN 125
                                                                       
Sbjct: 723 ------------------------------------------------------------ 782

Query: 126 EDPLPTFGSKAIHQGVYRDQVQTSFAWLKEMAEKMPEGQTAIVNSSTVTGQNGSNLNQLS 185
                                      LKEMAEKMPE QTAIVNSSTV+GQNGSNLNQLS
Sbjct: 783 ---------------------------LKEMAEKMPEAQTAIVNSSTVSGQNGSNLNQLS 838

Query: 186 TESLSMSINSRLESNGISKGQTLSTGIKALNEKAEWVVQDEPGVYITLSTLPGGFNELKR 245
           TESLSMSINSRLESNGISK QTLSTGIK +NEKAEWVVQDEPGVYITLS LPGGFNELKR
Sbjct: 843 TESLSMSINSRLESNGISKSQTLSTGIKTVNEKAEWVVQDEPGVYITLSALPGGFNELKR 838

Query: 246 VRFSRRHFTEAQAEKWWADFGAKVCERHKVKSTD 280
           VRFSRRHFTEAQAEKWWA+FGAKVCERHKVKSTD
Sbjct: 903 VRFSRRHFTEAQAEKWWAEFGAKVCERHKVKSTD 838

[Close]
BLAST of CsGy2G008750 vs. NCBI nr
Match: XP_022156646.1 (E3 ubiquitin-protein ligase HERC2-like isoform X3 [Momordica charantia])

HSP 1 Score: 251.1 bits (640), Expect = 4.3e-63
Identity = 152/274 (55.47%), Postives = 162/274 (59.12%), Query Frame = 0 

Query: 6   VQELTCKSKNLEAELEKTSKKLLEVTAIAADEAEKCKSAKEVIKSLAAQLNPLKDCKNFG 65
           VQELTCKSKNLEAELEKTSKKL+E+TAIAADEAE+CKSAKEVIKSLAAQ           
Sbjct: 666 VQELTCKSKNLEAELEKTSKKLMEITAIAADEAERCKSAKEVIKSLAAQ----------- 725

Query: 66  HVSFQIHIKKMNRHLQIIIRISDNSPWTQWMEEQSSKPHRHSTLRSRRMDCISLRRYQTN 125
                                                                       
Sbjct: 726 ------------------------------------------------------------ 785

Query: 126 EDPLPTFGSKAIHQGVYRDQVQTSFAWLKEMAEKMPEGQTAIVNSSTVTGQNGSNLNQLS 185
                                      LK+MAEKMPEG +AI +S TV+GQN SN NQLS
Sbjct: 786 ---------------------------LKDMAEKMPEGYSAISHSGTVSGQNVSNSNQLS 841

Query: 186 TESLSMSINSRLESNGISKGQTLSTGIKALNEKAEWVVQDEPGVYITLSTLPGGFNELKR 245
            ESLSMSINSRLESNGISK QT+STG K  NEKAEWVVQDEPGVYITL+ LPGG NELKR
Sbjct: 846 AESLSMSINSRLESNGISKSQTISTGTKGQNEKAEWVVQDEPGVYITLAALPGGGNELKR 841

Query: 246 VRFSRRHFTEAQAEKWWADFGAKVCERHKVKSTD 280
           VRFSRRHFTEAQAEKWWA+FG KVCERH VKSTD
Sbjct: 906 VRFSRRHFTEAQAEKWWAEFGTKVCERHNVKSTD 841

[Close]
BLAST of CsGy2G008750 vs. TAIR10
Match: AT1G69710.1 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain)

HSP 1 Score: 102.8 bits (255), Expect = 3.4e-22
Identity = 54/94 (57.45%), Postives = 68/94 (72.34%), Query Frame = 0 

Query: 182  NQLSTESLSMSINSRLESNGISKGQTLSTGIKALNEKAEWVVQDEPGVYITLSTLPGGFN 241
            NQ    S+ +S +S+ E+N  SK  + + G +  N+K E VVQDEPGVY+TL +LPGG  
Sbjct: 948  NQTHIRSM-VSQDSQNENNLTSK--SFANGHRKQNDKPEKVVQDEPGVYLTLLSLPGGGT 1007

Query: 242  ELKRVRFSRRHFTEAQAEKWWADFGAKVCERHKV 276
            ELKRVRFSR+ FTE QAEKWW + GAKVCERH +
Sbjct: 1008 ELKRVRFSRKQFTEEQAEKWWGENGAKVCERHNI 1038


HSP 2 Score: 32.7 bits (73), Expect = 4.4e-01
Identity = 18/35 (51.43%), Postives = 26/35 (74.29%), Query Frame = 0 

Query: 3   QKDVQELTCKSKNLEAELEKTSKKLLEVTAIAADE 38
           ++ V++L  K+  LE ELEKT ++L  VTA+AADE
Sbjct: 863 KEQVEQLASKAHQLEEELEKTKRQLKVVTAMAADE 897

[Close]
BLAST of CsGy2G008750 vs. TAIR10
Match: AT5G19420.2 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain)

HSP 1 Score: 99.0 bits (245), Expect = 4.9e-21
Identity = 87/276 (31.52%), Postives = 127/276 (46.01%), Query Frame = 0 

Query: 1    MSQKDVQELTCKSKNLEAELEKTSKKLLEVTAIAADEAEKCKSAKEVIKSLAAQLNPLKD 60
            M +  V+ LT K++  E ELE+T+K+L E  AIA++E+ +CK+AKEVIKSL AQL  + +
Sbjct: 914  MLRSQVENLTRKAQLQEVELERTTKQLKEALAIASEESARCKAAKEVIKSLTAQLKDMAE 973

Query: 61   CKNFGHVSFQIHIKKMNRHLQIIIRISDNSPWTQWMEEQSSKPHRHSTLRSRRMDCISLR 120
                G     +    +N           +SP   +    S+  +R ++ R    D ++  
Sbjct: 974  RLPVGSAR-TVKSPSLNSF--------GSSP--DYAAPSSNTLNRPNS-RETDSDSLTTV 1033

Query: 121  RYQTNEDPLPTFGSKAIHQGVYRDQVQTSFAWLKEMAEKMPEGQTAIVNSSTVTGQNGSN 180
               +N    P F S     G YR Q   +                               
Sbjct: 1034 PMFSNGTSTPVFDS-----GSYRQQANHA----------------------------AEA 1093

Query: 181  LNQLSTESLSMSINSRLESNGISKGQTLSTGIKALNEKAEWVVQDEPGVYITLSTLPGGF 240
            +N++ST S                        +  NE  EWV QDEPGVYITL+ L GG 
Sbjct: 1094 INRISTRSKES---------------------EPRNEN-EWVEQDEPGVYITLTALAGGA 1122

Query: 241  NELKRVRFSRRHFTEAQAEKWWADFGAKVCERHKVK 277
             +LKRVRFSR+ F+E QAE+WWA+   +V E++ V+
Sbjct: 1154 RDLKRVRFSRKRFSEKQAEEWWAENRGRVYEQYNVR 1122

[Close]
BLAST of CsGy2G008750 vs. TAIR10
Match: AT5G12350.1 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain)

HSP 1 Score: 93.6 bits (231), Expect = 2.1e-19
Identity = 85/289 (29.41%), Postives = 114/289 (39.45%), Query Frame = 0 

Query: 3    QKDVQELTCKSKNLEAELEKTSKKLLEVTAIAADEAEKCKSAKEVIKSLAAQLNPLKDCK 62
            +  V+ LT K++  E ELE+T+K+L E  AI  +E  +CK+AKEVIKSL AQ        
Sbjct: 878  RSQVESLTRKAQLQEVELERTTKQLKEALAITNEETTRCKAAKEVIKSLTAQ-------- 937

Query: 63   NFGHVSFQIHIKKMNRHLQIIIRISDNSPWTQWMEEQSSKPHRHSTLRSRRMDCISLRRY 122
                                                                        
Sbjct: 938  ------------------------------------------------------------ 997

Query: 123  QTNEDPLPTFGSKAIHQGVYRDQVQTSFAWLKEMAEKMPEGQTAIVNSSTVTGQNGSNLN 182
                                          LK+MAE++P G    V S       GS+  
Sbjct: 998  ------------------------------LKDMAERLPVGSARTVKSPPSLNSFGSSPG 1057

Query: 183  QLSTESLSMSINSR-LESNGIS-----------KGQTLSTGIKALNEKAEWVVQDEPGVY 242
            ++   ++    NS+  E NGI+                     A NEK EWV QDEPGVY
Sbjct: 1058 RIDPFNILNQANSQESEPNGITTPMFXXXXXXXXXXXXXXXXXARNEK-EWVEQDEPGVY 1067

Query: 243  ITLSTLPGGFNELKRVRFSRRHFTEAQAEKWWADFGAKVCERHKVKSTD 280
            ITL+ L GG  +LKRVRFSR+ F+E QAE+WWAD   +V E++ V+  D
Sbjct: 1118 ITLTALAGGARDLKRVRFSRKRFSEIQAEQWWADNRGRVYEQYNVRMVD 1067

[Close]
BLAST of CsGy2G008750 vs. TAIR10
Match: AT5G42140.1 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain)

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-14
Identity = 34/62 (54.84%), Postives = 44/62 (70.97%), Query Frame = 0 

Query: 218  KAEWVVQDEPGVYITLSTLPGGFNELKRVRFSRRHFTEAQAEKWWADFGAKVCERHKVKS 277
            +AEW+ Q EPGVYITL  L  G  +LKRVRFSRR F E QAE WW++   +V E++ ++ 
Sbjct: 998  EAEWIEQYEPGVYITLLALGDGTRDLKRVRFSRRRFREQQAETWWSENRERVYEKYNIRG 1057

Query: 278  TD 280
            TD
Sbjct: 1058 TD 1059

[Close]
BLAST of CsGy2G008750 vs. TAIR10
Match: AT1G76950.1 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain)

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-14
Identity = 76/275 (27.64%), Postives = 119/275 (43.27%), Query Frame = 0 

Query: 6    VQELTCKSKNLEAELEKTSKKLLEVTAIAADEAEKCKSAKEVIKSLAAQLNPLKDCKNFG 65
            V  LT K +  E EL+ + KK  E  A+A +E+ K ++AKE IKSL AQL  + +    G
Sbjct: 849  VDSLTQKCEFQEVELQNSVKKTQEALALAEEESAKSRAAKEAIKSLIAQLKDVAEKLPPG 908

Query: 66   HVSFQIHIKKMNRHLQIIIRISDNSPWTQWMEEQSSKPHRHSTLRSRRMDCISLRRYQTN 125
                 + +  +   L        +     + EE    P R  ++ S              
Sbjct: 909  E---SVKLACLQNGL--------DQNGFHFPEENGFHPSRSESMTS-------------- 968

Query: 126  EDPLPTFGSKAIHQGVYRDQVQTSFAWLKEMAEKMPEGQTAIVNSSTVTGQNGSNLNQLS 185
                      +I      D    + +W    + K     +   +++       S+   + 
Sbjct: 969  ----------SISSVAPFDFAFANASWSNLQSPKQTPRASERNSNAYPADPRLSSSGSVI 1028

Query: 186  TESLSMSINSRLESNGISKGQTLSTGIKALNE-KAEWVVQDEPGVYITLSTLPGGFNELK 245
            +E +          NG S+     TG+   N+ +AEW+ Q EPGVYITL  L  G  +L+
Sbjct: 1029 SERIEPFQFQNNSDNGSSQ-----TGVNNTNQVEAEWIEQYEPGVYITLVALHDGTRDLR 1083

Query: 246  RVRFSRRHFTEAQAEKWWADFGAKVCERHKVKSTD 280
            RVRFSRR F E QAE WW++   KV E++ V+ ++
Sbjct: 1089 RVRFSRRRFGEHQAETWWSENREKVYEKYNVRVSE 1083

[Close]
BLAST of CsGy2G008750 vs. Swiss-Prot
Match: sp|Q6YUB8|BRXL1_ORYSJ (Protein Brevis radix-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=BRXL1 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.8e-13
Identity = 39/98 (39.80%), Postives = 62/98 (63.27%), Query Frame = 0 

Query: 179 SNLNQLSTESLSMSINSRLESN--GISKGQTLSTGI-KALNEKAEWVVQDEPGVYITLST 238
           S+++   TE+ SM  + R  S+   + + + LS  +  A +++ EWV +DEPGVYIT+  
Sbjct: 299 SSISGAKTETSSMDASMRSSSSPEEVDRSRELSVSVSNASDQEREWVEEDEPGVYITIRA 358

Query: 239 LPGGFNELKRVRFSRRHFTEAQAEKWWADFGAKVCERH 274
           LPGG  EL+RVRFSR  F+E  A  WW +  A++ +++
Sbjct: 359 LPGGIRELRRVRFSREKFSEMHARLWWEENRARIHDQY 396

[Close]
BLAST of CsGy2G008750 vs. Swiss-Prot
Match: sp|Q947D2|PRAF1_ARATH (PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRAF1 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.8e-13
Identity = 76/275 (27.64%), Postives = 119/275 (43.27%), Query Frame = 0 

Query: 6    VQELTCKSKNLEAELEKTSKKLLEVTAIAADEAEKCKSAKEVIKSLAAQLNPLKDCKNFG 65
            V  LT K +  E EL+ + KK  E  A+A +E+ K ++AKE IKSL AQL  + +    G
Sbjct: 849  VDSLTQKCEFQEVELQNSVKKTQEALALAEEESAKSRAAKEAIKSLIAQLKDVAEKLPPG 908

Query: 66   HVSFQIHIKKMNRHLQIIIRISDNSPWTQWMEEQSSKPHRHSTLRSRRMDCISLRRYQTN 125
                 + +  +   L        +     + EE    P R  ++ S              
Sbjct: 909  E---SVKLACLQNGL--------DQNGFHFPEENGFHPSRSESMTS-------------- 968

Query: 126  EDPLPTFGSKAIHQGVYRDQVQTSFAWLKEMAEKMPEGQTAIVNSSTVTGQNGSNLNQLS 185
                      +I      D    + +W    + K     +   +++       S+   + 
Sbjct: 969  ----------SISSVAPFDFAFANASWSNLQSPKQTPRASERNSNAYPADPRLSSSGSVI 1028

Query: 186  TESLSMSINSRLESNGISKGQTLSTGIKALNE-KAEWVVQDEPGVYITLSTLPGGFNELK 245
            +E +          NG S+     TG+   N+ +AEW+ Q EPGVYITL  L  G  +L+
Sbjct: 1029 SERIEPFQFQNNSDNGSSQ-----TGVNNTNQVEAEWIEQYEPGVYITLVALHDGTRDLR 1083

Query: 246  RVRFSRRHFTEAQAEKWWADFGAKVCERHKVKSTD 280
            RVRFSRR F E QAE WW++   KV E++ V+ ++
Sbjct: 1089 RVRFSRRRFGEHQAETWWSENREKVYEKYNVRVSE 1083

[Close]
BLAST of CsGy2G008750 vs. Swiss-Prot
Match: sp|Q8GZ92|BRXL4_ARATH (Protein Brevis radix-like 4 OS=Arabidopsis thaliana OX=3702 GN=BRXL4 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.5e-11
Identity = 38/95 (40.00%), Postives = 55/95 (57.89%), Query Frame = 0 

Query: 179 SNLNQLSTESLSMSINSRLESNGISKGQTLSTGIKALNEKAEWVVQDEPGVYITLSTLPG 238
           S+++   TE+ S+  + R  S+  +      +   A +   EWV QDEPGVYIT+  LPG
Sbjct: 289 SSISVAKTETSSIDASIRSSSSRDADRSEEMSVSNASDVDNEWVEQDEPGVYITIKVLPG 348

Query: 239 GFNELKRVRFSRRHFTEAQAEKWWADFGAKVCERH 274
           G  EL+RVRFSR  F E  A  WW +  A++ E++
Sbjct: 349 GKRELRRVRFSRERFGEMHARLWWEENRARIHEQY 383

[Close]
BLAST of CsGy2G008750 vs. Swiss-Prot
Match: sp|Q5HZ09|BRXL3_ARATH (Protein Brevis radix-like 3 OS=Arabidopsis thaliana OX=3702 GN=BRXL3 PE=2 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 2.0e-11
Identity = 34/88 (38.64%), Postives = 54/88 (61.36%), Query Frame = 0 

Query: 186 TESLSMSINSRLESNGISKGQTLSTGIKALNEKAEWVVQDEPGVYITLSTLPGGFNELKR 245
           T++ + SI+    S+ + + + +S    A + ++EWV QDEPG+YIT+  LP G  EL+R
Sbjct: 283 TKTETSSIDGSARSSSVDRSEEVSVS-NASDMESEWVEQDEPGIYITIRALPDGNRELRR 342

Query: 246 VRFSRRHFTEAQAEKWWADFGAKVCERH 274
           VRFSR  F E  A  WW    A++ +++
Sbjct: 343 VRFSRDKFGETHARLWWEQNRARIQQQY 369

[Close]
BLAST of CsGy2G008750 vs. Swiss-Prot
Match: sp|Q8GYL9|BRXL2_ARATH (Protein Brevis radix-like 2 OS=Arabidopsis thaliana OX=3702 GN=BRXL2 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.9e-10
Identity = 40/104 (38.46%), Postives = 61/104 (58.65%), Query Frame = 0 

Query: 177 NGSNLNQLSTESLSMSINSRLESNGISK---GQTLST-GIKALNEKAEWVVQDEPGVYIT 236
           +GS+  ++  + +   +   L   G  +   G+T ST  ++  +E  EWV Q EPGV IT
Sbjct: 97  SGSSTPKILGKEMESRLKGFLSGEGTPESMSGRTESTVFMEEEDELKEWVAQVEPGVLIT 156

Query: 237 LSTLPGGFNELKRVRFSRRHFTEAQAEKWWADFGAKVCERHKVK 277
             +LP G N++KR+RFSR  F + QA+KWWA+   KV E + V+
Sbjct: 157 FVSLPEGGNDMKRIRFSREMFDKWQAQKWWAENFDKVMELYNVQ 200

[Close]
BLAST of CsGy2G008750 vs. TrEMBL
Match: tr|A0A0A0LN51|A0A0A0LN51_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G110220 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 3.8e-76
Identity = 176/274 (64.23%), Postives = 176/274 (64.23%), Query Frame = 0 

Query: 6   VQELTCKSKNLEAELEKTSKKLLEVTAIAADEAEKCKSAKEVIKSLAAQLNPLKDCKNFG 65
           VQELTCKSKNLEAELEKTSKKLLEVTAIAADEAEKCKSAKEVIKSLAAQ           
Sbjct: 4   VQELTCKSKNLEAELEKTSKKLLEVTAIAADEAEKCKSAKEVIKSLAAQ----------- 63

Query: 66  HVSFQIHIKKMNRHLQIIIRISDNSPWTQWMEEQSSKPHRHSTLRSRRMDCISLRRYQTN 125
                                                                       
Sbjct: 64  ------------------------------------------------------------ 123

Query: 126 EDPLPTFGSKAIHQGVYRDQVQTSFAWLKEMAEKMPEGQTAIVNSSTVTGQNGSNLNQLS 185
                                      LKEMAEKMPEGQTAIVNSSTVTGQNGSNLNQLS
Sbjct: 124 ---------------------------LKEMAEKMPEGQTAIVNSSTVTGQNGSNLNQLS 179

Query: 186 TESLSMSINSRLESNGISKGQTLSTGIKALNEKAEWVVQDEPGVYITLSTLPGGFNELKR 245
           TESLSMSINSRLESNGISKGQTLSTGIKALNEKAEWVVQDEPGVYITLSTLPGGFNELKR
Sbjct: 184 TESLSMSINSRLESNGISKGQTLSTGIKALNEKAEWVVQDEPGVYITLSTLPGGFNELKR 179

Query: 246 VRFSRRHFTEAQAEKWWADFGAKVCERHKVKSTD 280
           VRFSRRHFTEAQAEKWWADFGAKVCERHKVKSTD
Sbjct: 244 VRFSRRHFTEAQAEKWWADFGAKVCERHKVKSTD 179

[Close]
BLAST of CsGy2G008750 vs. TrEMBL
Match: tr|A0A1S4DUS6|A0A1S4DUS6_CUCME (X-linked retinitis pigmentosa GTPase regulator-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103485768 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.3e-72
Identity = 168/274 (61.31%), Postives = 172/274 (62.77%), Query Frame = 0 

Query: 6   VQELTCKSKNLEAELEKTSKKLLEVTAIAADEAEKCKSAKEVIKSLAAQLNPLKDCKNFG 65
           VQELTCKSKNLEAELEKTSKKL+EVTAIAADEAEKCKSAKEVIKSLAAQ           
Sbjct: 663 VQELTCKSKNLEAELEKTSKKLMEVTAIAADEAEKCKSAKEVIKSLAAQ----------- 722

Query: 66  HVSFQIHIKKMNRHLQIIIRISDNSPWTQWMEEQSSKPHRHSTLRSRRMDCISLRRYQTN 125
                                                                       
Sbjct: 723 ------------------------------------------------------------ 782

Query: 126 EDPLPTFGSKAIHQGVYRDQVQTSFAWLKEMAEKMPEGQTAIVNSSTVTGQNGSNLNQLS 185
                                      LKEMAEKMPE QTAIVNSSTV+GQNGSNLNQLS
Sbjct: 783 ---------------------------LKEMAEKMPEAQTAIVNSSTVSGQNGSNLNQLS 838

Query: 186 TESLSMSINSRLESNGISKGQTLSTGIKALNEKAEWVVQDEPGVYITLSTLPGGFNELKR 245
           TESLSMSINSRLESNGISK QTLSTGIK +NEKAEWVVQDEPGVYITLS LPGGFNELKR
Sbjct: 843 TESLSMSINSRLESNGISKSQTLSTGIKTVNEKAEWVVQDEPGVYITLSALPGGFNELKR 838

Query: 246 VRFSRRHFTEAQAEKWWADFGAKVCERHKVKSTD 280
           VRFSRRHFTEAQAEKWWA+FGAKVCERHKVKSTD
Sbjct: 903 VRFSRRHFTEAQAEKWWAEFGAKVCERHKVKSTD 838

[Close]
BLAST of CsGy2G008750 vs. TrEMBL
Match: tr|A0A1S3B4R6|A0A1S3B4R6_CUCME (X-linked retinitis pigmentosa GTPase regulator-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485768 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.3e-72
Identity = 168/274 (61.31%), Postives = 172/274 (62.77%), Query Frame = 0 

Query: 6   VQELTCKSKNLEAELEKTSKKLLEVTAIAADEAEKCKSAKEVIKSLAAQLNPLKDCKNFG 65
           VQELTCKSKNLEAELEKTSKKL+EVTAIAADEAEKCKSAKEVIKSLAAQ           
Sbjct: 807 VQELTCKSKNLEAELEKTSKKLMEVTAIAADEAEKCKSAKEVIKSLAAQ----------- 866

Query: 66  HVSFQIHIKKMNRHLQIIIRISDNSPWTQWMEEQSSKPHRHSTLRSRRMDCISLRRYQTN 125
                                                                       
Sbjct: 867 ------------------------------------------------------------ 926

Query: 126 EDPLPTFGSKAIHQGVYRDQVQTSFAWLKEMAEKMPEGQTAIVNSSTVTGQNGSNLNQLS 185
                                      LKEMAEKMPE QTAIVNSSTV+GQNGSNLNQLS
Sbjct: 927 ---------------------------LKEMAEKMPEAQTAIVNSSTVSGQNGSNLNQLS 982

Query: 186 TESLSMSINSRLESNGISKGQTLSTGIKALNEKAEWVVQDEPGVYITLSTLPGGFNELKR 245
           TESLSMSINSRLESNGISK QTLSTGIK +NEKAEWVVQDEPGVYITLS LPGGFNELKR
Sbjct: 987 TESLSMSINSRLESNGISKSQTLSTGIKTVNEKAEWVVQDEPGVYITLSALPGGFNELKR 982

Query: 246 VRFSRRHFTEAQAEKWWADFGAKVCERHKVKSTD 280
           VRFSRRHFTEAQAEKWWA+FGAKVCERHKVKSTD
Sbjct: 1047 VRFSRRHFTEAQAEKWWAEFGAKVCERHKVKSTD 982

[Close]
BLAST of CsGy2G008750 vs. TrEMBL
Match: tr|A0A1S3B416|A0A1S3B416_CUCME (X-linked retinitis pigmentosa GTPase regulator-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103485768 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.3e-72
Identity = 168/274 (61.31%), Postives = 172/274 (62.77%), Query Frame = 0 

Query: 6   VQELTCKSKNLEAELEKTSKKLLEVTAIAADEAEKCKSAKEVIKSLAAQLNPLKDCKNFG 65
           VQELTCKSKNLEAELEKTSKKL+EVTAIAADEAEKCKSAKEVIKSLAAQ           
Sbjct: 665 VQELTCKSKNLEAELEKTSKKLMEVTAIAADEAEKCKSAKEVIKSLAAQ----------- 724

Query: 66  HVSFQIHIKKMNRHLQIIIRISDNSPWTQWMEEQSSKPHRHSTLRSRRMDCISLRRYQTN 125
                                                                       
Sbjct: 725 ------------------------------------------------------------ 784

Query: 126 EDPLPTFGSKAIHQGVYRDQVQTSFAWLKEMAEKMPEGQTAIVNSSTVTGQNGSNLNQLS 185
                                      LKEMAEKMPE QTAIVNSSTV+GQNGSNLNQLS
Sbjct: 785 ---------------------------LKEMAEKMPEAQTAIVNSSTVSGQNGSNLNQLS 840

Query: 186 TESLSMSINSRLESNGISKGQTLSTGIKALNEKAEWVVQDEPGVYITLSTLPGGFNELKR 245
           TESLSMSINSRLESNGISK QTLSTGIK +NEKAEWVVQDEPGVYITLS LPGGFNELKR
Sbjct: 845 TESLSMSINSRLESNGISKSQTLSTGIKTVNEKAEWVVQDEPGVYITLSALPGGFNELKR 840

Query: 246 VRFSRRHFTEAQAEKWWADFGAKVCERHKVKSTD 280
           VRFSRRHFTEAQAEKWWA+FGAKVCERHKVKSTD
Sbjct: 905 VRFSRRHFTEAQAEKWWAEFGAKVCERHKVKSTD 840

[Close]
BLAST of CsGy2G008750 vs. TrEMBL
Match: tr|A0A2H5N9Y2|A0A2H5N9Y2_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_023380 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 2.3e-36
Identity = 119/281 (42.35%), Postives = 154/281 (54.80%), Query Frame = 0 

Query: 6    VQELTCKSKNLEAELEKTSKKLLEVTAIAADEAEKCKSAKEVIKSLAAQ-LNPLKDCKNF 65
            V+ELT KS++LEAELE+TSK+L  VTAIA DEAEKCK+A EVIKSL  Q LN      N 
Sbjct: 820  VEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQGLNSKVGLWNN 879

Query: 66   GHVSFQI----HIKKMNRHLQIII-RISDNSPWTQWMEEQSSKPHRH-STLRSRRMDCIS 125
               + Q      + +    L II+ ++++ SP        S    RH S +R+       
Sbjct: 880  QDRNRQALLWEQLGEAALKLAIILKKMAEKSPEGASPSFTSGSTARHPSGVRT------- 939

Query: 126  LRRYQTNEDPLPTFGSKAIHQGVYRDQVQTSFAWLKEMAEKMPEGQTAIVNSSTVTGQNG 185
               Y T      T    +        Q  +    LK+MAEK PEG +    S +      
Sbjct: 940  --TYSTESQKTNTTAPASESNSNSAQQNLSHVLQLKKMAEKSPEGASPSFTSGSTARHPS 999

Query: 186  SNLNQLSTESLSMSINS-RLESNGISKGQTLSTGIKALNEKAEWVVQDEPGVYITLSTLP 245
                  STES   +  +   ESN  S  Q LS G K   E+ E +VQ E GVYITLSTLP
Sbjct: 1000 GVRTTYSTESQKTNTTAPASESNSNSAQQNLSHGTKVQTERKERMVQAESGVYITLSTLP 1059

Query: 246  GGFNELKRVRFSRRHFTEAQAEKWWADFGAKVCERHKVKST 279
            GG NE+KRVRFSR+HFTE +AEKWW++ GAK+CER+ ++S+
Sbjct: 1060 GGGNEVKRVRFSRKHFTEQEAEKWWSENGAKICERYNIRSS 1091

The following BLAST results are available for this feature:
BLAST of CsGy2G008750 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61396.15.8e-7664.23hypothetical protein Csa_2G110220 [Cucumis sativus][more]
XP_008441692.15.1e-7261.31PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like isoform X1 [Cucum... [more]
XP_008441694.15.1e-7261.31PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like isoform X3 [Cucum... [more]
XP_016899470.15.1e-7261.31PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like isoform X4 [Cucum... [more]
XP_022156646.14.3e-6355.47E3 ubiquitin-protein ligase HERC2-like isoform X3 [Momordica charantia][more]
BLAST of CsGy2G008750 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G69710.13.4e-2257.45Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain[more]
AT5G19420.24.9e-2131.52Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain[more]
AT5G12350.12.1e-1929.41Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain[more]
AT5G42140.11.2e-1454.84Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain[more]
AT1G76950.11.5e-1427.64Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain[more]
BLAST of CsGy2G008750 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q6YUB8|BRXL1_ORYSJ2.8e-1339.80Protein Brevis radix-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=BRXL1 PE... [more]
sp|Q947D2|PRAF1_ARATH2.8e-1327.64PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana OX=3702 G... [more]
sp|Q8GZ92|BRXL4_ARATH1.5e-1140.00Protein Brevis radix-like 4 OS=Arabidopsis thaliana OX=3702 GN=BRXL4 PE=2 SV=1[more]
sp|Q5HZ09|BRXL3_ARATH2.0e-1138.64Protein Brevis radix-like 3 OS=Arabidopsis thaliana OX=3702 GN=BRXL3 PE=2 SV=2[more]
sp|Q8GYL9|BRXL2_ARATH2.9e-1038.46Protein Brevis radix-like 2 OS=Arabidopsis thaliana OX=3702 GN=BRXL2 PE=2 SV=1[more]
BLAST of CsGy2G008750 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LN51|A0A0A0LN51_CUCSA3.8e-7664.23Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G110220 PE=4 SV=1[more]
tr|A0A1S4DUS6|A0A1S4DUS6_CUCME3.3e-7261.31X-linked retinitis pigmentosa GTPase regulator-like isoform X4 OS=Cucumis melo O... [more]
tr|A0A1S3B4R6|A0A1S3B4R6_CUCME3.3e-7261.31X-linked retinitis pigmentosa GTPase regulator-like isoform X1 OS=Cucumis melo O... [more]
tr|A0A1S3B416|A0A1S3B416_CUCME3.3e-7261.31X-linked retinitis pigmentosa GTPase regulator-like isoform X3 OS=Cucumis melo O... [more]
tr|A0A2H5N9Y2|A0A2H5N9Y2_CITUN2.3e-3642.35Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_023380 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013591Brevis_radix_dom
IPR027988BRX_N
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G008750.1CsGy2G008750.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 6..33
NoneNo IPR availablePANTHERPTHR22870:SF183REGULATOR OF CHROMOSOME CONDENSATION AND FYVE ZINC FINGER DOMAIN-CONTAINING PROTEINcoord: 147..276
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 4..74
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 147..276
NoneNo IPR availablePANTHERPTHR22870:SF183REGULATOR OF CHROMOSOME CONDENSATION AND FYVE ZINC FINGER DOMAIN-CONTAINING PROTEINcoord: 4..74
IPR027988Transcription factor BREVIS RADIX, N-terminal domainPFAMPF13713BRX_Ncoord: 36..55
e-value: 1.2E-7
score: 31.2
IPR013591Brevis radix (BRX) domainPFAMPF08381BRXcoord: 218..273
e-value: 6.7E-25
score: 86.1
IPR013591Brevis radix (BRX) domainPROSITEPS51514BRXcoord: 219..274
score: 28.045

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy2G008750Cla003364Watermelon (97103) v1cgybwmB150
CsGy2G008750Csa2G110220Cucumber (Chinese Long) v2cgybcuB056
CsGy2G008750MELO3C008528Melon (DHL92) v3.5.1cgybmeB124
CsGy2G008750ClCG11G009370Watermelon (Charleston Gray)cgybwcgB100
CsGy2G008750CSPI02G08440Wild cucumber (PI 183967)cgybcpiB056
CsGy2G008750Bhi06G000742Wax gourdcgybwgoB134
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy2G008750Cucurbita maxima (Rimu)cgybcmaB259
CsGy2G008750Cucurbita moschata (Rifu)cgybcmoB240
CsGy2G008750Cucurbita pepo (Zucchini)cgybcpeB171
CsGy2G008750Bottle gourd (USVL1VR-Ls)cgyblsiB089
CsGy2G008750Melon (DHL92) v3.6.1cgybmedB122
CsGy2G008750Cucumber (Chinese Long) v3cgybcucB064