CsGy1G025730 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G025730
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	REF/SRPP-like protein At3g05500
Location	Chr1 : 24548309 .. 24550370 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTACAAAAAAAAATTCTAAAAAATGATTAGATGTGTATGAAAATTGAATAGTAATGAAGAGAATTCTAGAACCGTCCATTACTCGGATCCTTTCATCACGAACTTAACCGCTAAGGAACAGTCAACGACGTCCCTTCCGCCTTCTAAATCTACGTTTCCTCAAAACCTTCCAATTTCCCATCAACGGGCCGTCCGTTCTCACCGACTCCATTGCCGCGTTCTTCTCCTCTATAAATCCTCACTTTCCCCCTTTTTCCCTTTCCATCCATCCCTACGTTGTATCTCCAACCATTTCCATTCTATTTCTCCGATTACATCTTCCTTCTTTTCCATTTCCGATATCAATTTTCCCTATGGCTGATTCCGATCTTTCATCGCAGCGCCAAGACATGCCGGTTAGGGCTGACCAGGGGAGCCTGAAGTATTTGGAATTTGTTCAAACGGCGGCGTTTCGAGCAACCGAGTGTTTCTTTAATGTTTATGGGTATGCGAAAGACAGGTCCGGTCCGTTGAAGCCCGGCGTTGAGACTGTTGAGGGCACTGTGAAATCCGTTGTTGCTCCTTTGTATAACAAGTTTCATGGCGTCCCGATTGAGGTTCTCAAATTCGTCGATCGCAAGGTTTCTTCTTAATCCCTCGAGTTTTATTCTTCTCTAACATAATTCTCTTTCGTTTCTTCTTGGCTGGATGAATATATATTAGGTTAAATTTAGAATTTTGTTTTTATGGTTTGTAATTATGGCTTACTTTGTATGATTTCTGGAGGATTTTATAAAATTTATGAGATTGTATACAATGTCATGCTTTCGTACTTTCGTATTCAAAATGGAGTCTGTACCAATTTTGCATTAGAAAGGCCCCAAGATGGATGATGGATAGTTTGTGTGTTGAAACACTTGTTATAATAGGAATTCGAAAAATTGAGTATTGAATTGAGATCGGGGCTGAACAACCGTAATTCGTTAAAGGAAACTTGATGTTTGTAGAAATTGATCTAAATTTCAGAGTCTGCAAGGGTTAGAATTGAGATTAGAAAGATTGATGTTGAAATTACAAGTAGAAAGATTTTCTGTAGTTAATCAAAGACTCAAAGCCTATGCTATTTCGCTTGAAATGATGCCAAGAACTGATGAGCATTGAGCATTAGAACATTGCGAAACAGTTTAGTTCACAGGAAACTTACTTTGTTTAATTGTAAATATGATCAGGTGGACGAGTCAGTGACGAAGATCGACCGCCACGTTCCTCCAACAGTCAAGCAGGCCTCATCACAAGCCATGTTTGCTGCACAGCAGGCACCTGAAGTCGCACGAAGCGTAGCCTCTGAGGTCCGACGCGCTGGCCTCAAAGACTCCGTGTCTGGGATTGTGAAATCTGTGTATGCCAAGTACGAGCCAAGCGCAAAGCAACTCTACTCCAAATACGAGCCCAAGGCCGAGCAGTGCGCAGCTTCAGCATGGCACAAGCTCAACCAGCTTCCTGTCTTCCCCACGGTTGCACAGGCCATCTTGCCAACAGCAGCTTACTGCACAGAGAAATACAACGAGACAGTACGAACCTCGGCCAAGAAAGGATACAAGGTCTCTTCATATCTACCATTGGTCCCTACTGAGAGAATTGCCAAAGTGTTCAGCAAGAACGGAGTTGAGATGGAGCCCTTGGTGAATTAAGACCCAAACCTGCTTCTTTTTTCTTTTATGATATTGTAAGAAGAAAAAAACACATTATGAATGTTTGGGAACTTATTCAGTGGTTATGTCACGTTTTGTTTTGTTAATATCTCTAAGTTAAGAGTTTGTACTTGTATTCGTCGTTGTGGTAGTCATCGACGAATCTACTTAGGGGCCAGAGTCGCACTTGACTCTCATTTGGTTGGTTTTTGTATTTTTAATATATATTTTAAATGCCTTCTAATAATATATACACAAAAATTCAACATAACTAATCAAATGGTGATGTAGTTGGACATTTTTACTTGTAGAGGTGTAGTTAGTAGCATAGCAAAAATTTAATTAGGTTTTAGATGAGAGGAAAATAAAAATCTTTTTGACTTCTCCGTA

mRNA sequence

CCTTACAAAAAAAAATTCTAAAAAATGATTAGATGTGTATGAAAATTGAATAGTAATGAAGAGAATTCTAGAACCGTCCATTACTCGGATCCTTTCATCACGAACTTAACCGCTAAGGAACAGTCAACGACGTCCCTTCCGCCTTCTAAATCTACGTTTCCTCAAAACCTTCCAATTTCCCATCAACGGGCCGTCCGTTCTCACCGACTCCATTGCCGCGTTCTTCTCCTCTATAAATCCTCACTTTCCCCCTTTTTCCCTTTCCATCCATCCCTACGTTGTATCTCCAACCATTTCCATTCTATTTCTCCGATTACATCTTCCTTCTTTTCCATTTCCGATATCAATTTTCCCTATGGCTGATTCCGATCTTTCATCGCAGCGCCAAGACATGCCGGTTAGGGCTGACCAGGGGAGCCTGAAGTATTTGGAATTTGTTCAAACGGCGGCGTTTCGAGCAACCGAGTGTTTCTTTAATGTTTATGGGTATGCGAAAGACAGGTCCGGTCCGTTGAAGCCCGGCGTTGAGACTGTTGAGGGCACTGTGAAATCCGTTGTTGCTCCTTTGTATAACAAGTTTCATGGCGTCCCGATTGAGGTTCTCAAATTCGTCGATCGCAAGGTGGACGAGTCAGTGACGAAGATCGACCGCCACGTTCCTCCAACAGTCAAGCAGGCCTCATCACAAGCCATGTTTGCTGCACAGCAGGCACCTGAAGTCGCACGAAGCGTAGCCTCTGAGGTCCGACGCGCTGGCCTCAAAGACTCCGTGTCTGGGATTGTGAAATCTGTGTATGCCAAGTACGAGCCAAGCGCAAAGCAACTCTACTCCAAATACGAGCCCAAGGCCGAGCAGTGCGCAGCTTCAGCATGGCACAAGCTCAACCAGCTTCCTGTCTTCCCCACGGTTGCACAGGCCATCTTGCCAACAGCAGCTTACTGCACAGAGAAATACAACGAGACAGTACGAACCTCGGCCAAGAAAGGATACAAGGTCTCTTCATATCTACCATTGGTCCCTACTGAGAGAATTGCCAAAGTGTTCAGCAAGAACGGAGTTGAGATGGAGCCCTTGGTGAATTAAGACCCAAACCTGCTTCTTTTTTCTTTTATGATATTGTAAGAAGAAAAAAACACATTATGAATGTTTGGGAACTTATTCAGTGGTTATGTCACGTTTTGTTTTGTTAATATCTCTAAGTTAAGAGTTTGTACTTGTATTCGTCGTTGTGGTAGTCATCGACGAATCTACTTAGGGGCCAGAGTCGCACTTGACTCTCATTTGGTTGGTTTTTGTATTTTTAATATATATTTTAAATGCCTTCTAATAATATATACACAAAAATTCAACATAACTAATCAAATGGTGATGTAGTTGGACATTTTTACTTGTAGAGGTGTAGTTAGTAGCATAGCAAAAATTTAATTAGGTTTTAGATGAGAGGAAAATAAAAATCTTTTTGACTTCTCCGTA

Coding sequence (CDS)

ATGGCTGATTCCGATCTTTCATCGCAGCGCCAAGACATGCCGGTTAGGGCTGACCAGGGGAGCCTGAAGTATTTGGAATTTGTTCAAACGGCGGCGTTTCGAGCAACCGAGTGTTTCTTTAATGTTTATGGGTATGCGAAAGACAGGTCCGGTCCGTTGAAGCCCGGCGTTGAGACTGTTGAGGGCACTGTGAAATCCGTTGTTGCTCCTTTGTATAACAAGTTTCATGGCGTCCCGATTGAGGTTCTCAAATTCGTCGATCGCAAGGTGGACGAGTCAGTGACGAAGATCGACCGCCACGTTCCTCCAACAGTCAAGCAGGCCTCATCACAAGCCATGTTTGCTGCACAGCAGGCACCTGAAGTCGCACGAAGCGTAGCCTCTGAGGTCCGACGCGCTGGCCTCAAAGACTCCGTGTCTGGGATTGTGAAATCTGTGTATGCCAAGTACGAGCCAAGCGCAAAGCAACTCTACTCCAAATACGAGCCCAAGGCCGAGCAGTGCGCAGCTTCAGCATGGCACAAGCTCAACCAGCTTCCTGTCTTCCCCACGGTTGCACAGGCCATCTTGCCAACAGCAGCTTACTGCACAGAGAAATACAACGAGACAGTACGAACCTCGGCCAAGAAAGGATACAAGGTCTCTTCATATCTACCATTGGTCCCTACTGAGAGAATTGCCAAAGTGTTCAGCAAGAACGGAGTTGAGATGGAGCCCTTGGTGAATTAA

Protein sequence

MADSDLSSQRQDMPVRADQGSLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEGTVKSVVAPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAPEVARSVASEVRRAGLKDSVSGIVKSVYAKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLPVFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPLVN

Homology

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BLAST of CsGy1G025730 vs. NCBI nr
Match: XP_004135611.1 (PREDICTED: REF/SRPP-like protein At3g05500 [Cucumis sativus] >KGN66066.1 hypothetical protein Csa_1G569430 [Cucumis sativus])

HSP 1 Score: 432.2 bits (1110), Expect = 1.2e-117
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0


Query: 1   MADSDLSSQRQDMPVRADQGSLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MADSDLSSQRQDMPVRADQGSLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV
Sbjct: 1   MADSDLSSQRQDMPVRADQGSLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVAPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAP 120
           EGTVKSVVAPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAP
Sbjct: 61  EGTVKSVVAPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAP 120

Query: 121 EVARSVASEVRRAGLKDSVSGIVKSVYAKYEPSXXXXXXXXXXXXXXXXXXAWHKLNQLP 180
           EVARSVASEVRRAGLKDSVSGIVKSVYAKYEPSXXXXXXXXXXXXXXXXXXAWHKLNQLP
Sbjct: 121 EVARSVASEVRRAGLKDSVSGIVKSVYAKYEPSXXXXXXXXXXXXXXXXXXAWHKLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240
           VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL
Sbjct: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

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BLAST of CsGy1G025730 vs. NCBI nr
Match: XP_022933698.1 (REF/SRPP-like protein At3g05500 [Cucurbita moschata])

HSP 1 Score: 359.8 bits (922), Expect = 7.4e-96
Identity = 200/242 (82.64%), Postives = 217/242 (89.67%), Query Frame = 0


Query: 1   MADSDLSSQRQDMPVRADQGSLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MADS+ SSQ  +M  RA++  LKYLEFVQTAAFRATECFFNVYGYAK+R GPL+PGVETV
Sbjct: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60

Query: 61  EGTVKSVVAPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAP 120
           EGTVKSVV PLYNKFHGVPIEVLKFVDRKVD SVTKIDRHVPPT+KQASSQAM       
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMXXXXXXX 120

Query: 121 EVARSVASEVRRAGLKDSVSGIVKSVYAKYEPSXXXXXXXXXXXXXXXXXXAWHKLNQLP 180
            +AR+VA EVR  GLKDSVSGIVKSVYAKYEP+XXXXXXXXXXXXXXXX  AWH+LNQLP
Sbjct: 121 XIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTXXXXXXXXXXXXXXXXASAWHRLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240
           VFPTVAQAILPTA YCTEKYNETV++++KKGYKVSSYLPLVPTERIAKVFSK+ +EMEPL
Sbjct: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

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BLAST of CsGy1G025730 vs. NCBI nr
Match: XP_023530281.1 (REF/SRPP-like protein At3g05500 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 350.9 bits (899), Expect = 3.5e-93
Identity = 197/242 (81.40%), Postives = 212/242 (87.60%), Query Frame = 0


Query: 1   MADSDLSSQRQDMPVRADQGSLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MADS+ SSQ Q+M  RA++  LKYLEFVQTAAFRATECFFNVYGYAK+R GPL+PGVETV
Sbjct: 1   MADSNPSSQHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60

Query: 61  EGTVKSVVAPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAP 120
           EGTVKSVV PLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPT+KQASS          
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSXXXXXXXXXX 120

Query: 121 EVARSVASEVRRAGLKDSVSGIVKSVYAKYEPSXXXXXXXXXXXXXXXXXXAWHKLNQLP 180
                VA EVR  GLKDSVSGIVKSVYAKYEP+XXXXXXXXXXXXXXXX  AWH+LNQLP
Sbjct: 121 XXXXXVALEVRHTGLKDSVSGIVKSVYAKYEPTXXXXXXXXXXXXXXXXASAWHRLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240
           VFPTVAQAILPTA YCTEKYNETV++++KKGYKVSSYLPLVPTERIAKVFSK+ +EMEPL
Sbjct: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

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BLAST of CsGy1G025730 vs. NCBI nr
Match: XP_022969922.1 (REF/SRPP-like protein At3g05500 [Cucurbita maxima])

HSP 1 Score: 337.8 bits (865), Expect = 3.0e-89
Identity = 190/242 (78.51%), Postives = 205/242 (84.71%), Query Frame = 0


Query: 1   MADSDLSSQRQDMPVRADQGSLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MADS+ SSQ  +M  RA++  LKYLEFVQTAAFRA+ECFFN YGYAK+R GPL+PGVETV
Sbjct: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRASECFFNAYGYAKNRIGPLRPGVETV 60

Query: 61  EGTVKSVVAPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAP 120
           EGTVKSVV PLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPT+KQA            
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQAXXXXXXXXXXXX 120

Query: 121 EVARSVASEVRRAGLKDSVSGIVKSVYAKYEPSXXXXXXXXXXXXXXXXXXAWHKLNQLP 180
                   EVR  GLKDSVSGIVKSVYAKYEP XXXXXXXXXXXXXXXX  AWH+LNQLP
Sbjct: 121 XXXXXXXMEVRHTGLKDSVSGIVKSVYAKYEPXXXXXXXXXXXXXXXXXASAWHRLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240
           VFPTVAQAILPTA YCTEKYNETV++++KKGYKVSSYLPLVPTERIAKVFSK+ +EMEPL
Sbjct: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

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BLAST of CsGy1G025730 vs. NCBI nr
Match: XP_008450634.1 (PREDICTED: REF/SRPP-like protein At3g05500 [Cucumis melo])

HSP 1 Score: 335.9 bits (860), Expect = 1.2e-88
Identity = 199/242 (82.23%), Postives = 201/242 (83.06%), Query Frame = 0


Query: 1   MADSDLSSQRQDMPVRADQGSLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MADSD SSQRQDM VRAD+  LKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV
Sbjct: 1   MADSDHSSQRQDMAVRADEDRLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVAPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAP 120
           EGTVKSVV PL NKFHGVPIEVLKFVDRKVDESVTK                        
Sbjct: 61  EGTVKSVVGPLCNKFHGVPIEVLKFVDRKVDESVTKXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 EVARSVASEVRRAGLKDSVSGIVKSVYAKYEPSXXXXXXXXXXXXXXXXXXAWHKLNQLP 180
                      R+GLKDSVSGIVKSVYAKYEPSXXXXXXXXXXXXXXXXXXAWHKLNQLP
Sbjct: 121 XXXXXXXXXXXRSGLKDSVSGIVKSVYAKYEPSXXXXXXXXXXXXXXXXXXAWHKLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240
           VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL
Sbjct: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

[Close]

BLAST of CsGy1G025730 vs. TAIR10
Match: AT3G05500.1 (Rubber elongation factor protein (REF))

HSP 1 Score: 258.8 bits (660), Expect = 3.2e-69
Identity = 150/237 (63.29%), Postives = 193/237 (81.43%), Query Frame = 0


Query: 4   SDLSSQRQDMPVRADQGSLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEGT 63
           +DL+  + DM  + ++  LKYL+FVQ AA  A   F  +Y  AKD+SGPLKPGVE+VEG 
Sbjct: 5   TDLAQPKLDM-TKEEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGA 64

Query: 64  VKSVVAPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAPEVA 123
           VK+VV P+Y K+H VP+EVLK++D+KVD SVT++DR VPP VKQ S+QA+ AAQ AP VA
Sbjct: 65  VKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVA 124

Query: 124 RSVASEVRRAGLKDSVSGIVKSVYAKYEPSXXXXXXXXXXXXXXXXXXAWHKLNQLPVFP 183
           R++ASEVRRAG+ ++ SG+ KSVY+KYE  XXXXXXXXXXXXXXXXXXAW KLNQLP+FP
Sbjct: 125 RALASEVRRAGVVETASGMAKSVYSKYEXXXXXXXXXXXXXXXXXXXXAWKKLNQLPLFP 184

Query: 184 TVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 241
            +AQ  +PTAA+C+EKYN+TV  +A+KGY+V+SY+PLVPTERI+K+F++   E EPL
Sbjct: 185 RLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAEEKAETEPL 240

[Close]

BLAST of CsGy1G025730 vs. TAIR10
Match: AT2G47780.1 (Rubber elongation factor protein (REF))

HSP 1 Score: 171.8 bits (434), Expect = 5.2e-43
Identity = 92/212 (43.40%), Postives = 128/212 (60.38%), Query Frame = 0


Query: 22  LKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEGTVKSVVAPLYNKFHGVPIE 81
           LK+LEF+Q AA     CF  +Y  AKD +GPLK GVE +E  V++V+APLY KFH VP +
Sbjct: 41  LKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKFHDVPFK 100

Query: 82  VLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAPEVARSVASEVRRAGLKDSVSG 141
           +L FVDRKVD+    ++ +VP  VKQASSQA+           +VA+EV+R G+ D+   
Sbjct: 101 LLLFVDRKVDDVFFDVETYVPSLVKQASSQAL-----------TVATEVQRTGVVDTTKS 160

Query: 142 IVKSVYAKYEPSXXXXXXXXXXXXXXXXXXAWHKLNQLPVFPTVAQAILPTAAYCTEKYN 201
           I +SV  KYEP+                   W  LNQLP+FP VA  ++PTA Y +EKYN
Sbjct: 161 IARSVRDKYEPA-----------AEYYAATLWRLLNQLPLFPEVAHLVIPTAFYWSEKYN 220

Query: 202 ETVRTSAKKGYKVSSYLPLVPTERIAKVFSKN 234
           + VR    + Y  + YLP++P E+I+ +  ++
Sbjct: 221 DAVRYVGDRDYFGAEYLPMIPIEKISDILEQD 230

[Close]

BLAST of CsGy1G025730 vs. TAIR10
Match: AT1G67360.2 (Rubber elongation factor protein (REF))

HSP 1 Score: 125.2 bits (313), Expect = 5.6e-29
Identity = 78/212 (36.79%), Postives = 100/212 (47.17%), Query Frame = 0


Query: 21  SLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEGTVKSVVAPLYNKFHGVPI 80
           +LK+L FV+ A         N+Y YAK  SGPLK  VE VEG V +VV P+Y KF  VP 
Sbjct: 12  ALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFKDVPD 71

Query: 81  EVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAPEVARSVASEVRRAGLKDSVS 140
            +L F+D KV E   K D H PP  K+  +QA     +A E A+S   E R  G K + +
Sbjct: 72  SLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGGPKAAFN 131

Query: 141 GIVKSVYAKYEPSXXXXXXXXXXXXXXXXXXAWHKLNQLPVFPTVAQAILPTAAYCTEKY 200
                 YA  E                     W KLNQ      +    LP AA+ + +Y
Sbjct: 132 ------YAATE---------YKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSSRY 191

Query: 201 NETVRTSAKKGYKVSSYLPLVPTERIAKVFSK 233
           N+ V      GY +  YLPLVP + I K + K
Sbjct: 192 NDLVTDMTNMGYSLVGYLPLVPVDDIVKAYEK 208

[Close]

BLAST of CsGy1G025730 vs. Swiss-Prot
Match: sp|Q9MA63|Y3550_ARATH (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana OX=3702 GN=At3g05500 PE=1 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 5.8e-68
Identity = 150/237 (63.29%), Postives = 193/237 (81.43%), Query Frame = 0


Query: 4   SDLSSQRQDMPVRADQGSLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEGT 63
           +DL+  + DM  + ++  LKYL+FVQ AA  A   F  +Y  AKD+SGPLKPGVE+VEG 
Sbjct: 5   TDLAQPKLDM-TKEEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGA 64

Query: 64  VKSVVAPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAPEVA 123
           VK+VV P+Y K+H VP+EVLK++D+KVD SVT++DR VPP VKQ S+QA+ AAQ AP VA
Sbjct: 65  VKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVA 124

Query: 124 RSVASEVRRAGLKDSVSGIVKSVYAKYEPSXXXXXXXXXXXXXXXXXXAWHKLNQLPVFP 183
           R++ASEVRRAG+ ++ SG+ KSVY+KYE  XXXXXXXXXXXXXXXXXXAW KLNQLP+FP
Sbjct: 125 RALASEVRRAGVVETASGMAKSVYSKYEXXXXXXXXXXXXXXXXXXXXAWKKLNQLPLFP 184

Query: 184 TVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 241
            +AQ  +PTAA+C+EKYN+TV  +A+KGY+V+SY+PLVPTERI+K+F++   E EPL
Sbjct: 185 RLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAEEKAETEPL 240

[Close]

BLAST of CsGy1G025730 vs. Swiss-Prot
Match: sp|Q9SW70|SRP_VITRI (Stress-related protein OS=Vitis riparia OX=96939 GN=SRP PE=2 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.4e-61
Identity = 131/230 (56.96%), Postives = 176/230 (76.52%), Query Frame = 0


Query: 1   MADSDLSSQRQDMPVRADQGSLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MA+S+  +++Q   V  ++  LKYL+FVQ AA     CF ++Y YAK+ SGPLKPGV+TV
Sbjct: 1   MAESE--AKQQPETVHGEEKRLKYLDFVQVAAIYVIVCFSSLYEYAKENSGPLKPGVQTV 60

Query: 61  EGTVKSVVAPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAP 120
           EGTVK+V+ P+Y KF+ VP E+L FVDRKV+ S+ +++RHVP  VK+AS QA+  AQ+AP
Sbjct: 61  EGTVKTVIGPVYEKFYDVPFELLMFVDRKVEASIYELERHVPSLVKRASCQAITVAQKAP 120

Query: 121 EVARSVASEVRRAGLKDSVSGIVKSVYAKYEPSXXXXXXXXXXXXXXXXXXAWHKLNQLP 180
           E+A +VASEV+R G+ D+   I K+VY+K EP+ XXXXXXXXXXX      AW  LN+LP
Sbjct: 121 ELALAVASEVQRPGVVDTAKNITKNVYSKCEPTAXXXXXXXXXXXEQYAVSAWRSLNRLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVF 231
           +FP VAQ ++PTAAY +EKYN++V  +A++GY V+ YLPL+PTERIAKVF
Sbjct: 181 LFPQVAQVVVPTAAYWSEKYNQSVSYTAERGYTVALYLPLIPTERIAKVF 228

[Close]

BLAST of CsGy1G025730 vs. Swiss-Prot
Match: sp|Q41112|SRP_PHAVU (Stress-related protein OS=Phaseolus vulgaris OX=3885 GN=SRP PE=2 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.9e-50
Identity = 110/192 (57.29%), Postives = 133/192 (69.27%), Query Frame = 0


Query: 42  VYGYAKDRSGPLKPGVETVEGTVKSVVAPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHV 101
           +Y YAK+R+GPLKPGV TVE  VK+VVAP+Y++FH VP+E+LK+ DRKV E    +DRHV
Sbjct: 6   LYSYAKERAGPLKPGVNTVEDAVKTVVAPVYDRFHLVPVELLKYADRKVGE----LDRHV 65

Query: 102 PPTVKQASSQAMFAAQQAPEVARSVASEVRRAGLKDSVSGIVKSVYAKYEPSXXXXXXXX 161
           P  VK+ SSQ           ARSV SEVRR    D VS   K+VY+KYEP+        
Sbjct: 66  PSNVKKVSSQ-----------ARSVVSEVRR----DGVSTFAKTVYSKYEPT-------- 125

Query: 162 XXXXXXXXXXAWHKLNQLPVFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLV 221
                     AW KLNQLP+FP VA A+LP AAYCTEKYNE + +SA+KGY+VS+YLPLV
Sbjct: 126 ---AEQCAVSAWRKLNQLPLFPQVANAVLPKAAYCTEKYNEVIVSSAEKGYRVSAYLPLV 167

Query: 222 PTERIAKVFSKN 234
           PTE+IAKVFS N
Sbjct: 186 PTEKIAKVFSGN 167

[Close]

BLAST of CsGy1G025730 vs. Swiss-Prot
Match: sp|A2Y0H2|Y5513_ORYSI (REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_017815 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 6.1e-49
Identity = 102/219 (46.58%), Postives = 141/219 (64.38%), Query Frame = 0


Query: 12  DMPVRADQGSLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEGTVKSVVAPL 71
           +M   A++  L+YLEFVQ AA +        Y YAK  +GPL+PGV+ VEGTVK+VV P+
Sbjct: 25  EMEAAAEEERLRYLEFVQQAAAQVLVLXXXXYAYAKQGAGPLRPGVDHVEGTVKAVVGPV 84

Query: 72  YNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAPEVARSVASEVR 131
           Y++FHGVP+++LKF+DRKV ESV ++DR VPP VK           +AP +ARS A+EVR
Sbjct: 85  YDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVK-----------EAPGLARSAAAEVR 144

Query: 132 RAGLKDSVSGIVKSVYAKYEPSXXXXXXXXXXXXXXXXXXAWHKLNQLPVFPTVAQAILP 191
           +AGL  + +G+ KS  A+ EP                   AW  LN+LP+ P+V +A+LP
Sbjct: 145 QAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLP 204

Query: 192 TAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVF 231
            AA  + +YN  V   AK+G  V++YLPLVPTER+++VF
Sbjct: 205 AAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF 232

[Close]

BLAST of CsGy1G025730 vs. Swiss-Prot
Match: sp|Q9FRA7|Y5513_ORYSJ (REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0151300 PE=2 SV=2)

HSP 1 Score: 195.7 bits (496), Expect = 6.1e-49
Identity = 102/219 (46.58%), Postives = 141/219 (64.38%), Query Frame = 0


Query: 12  DMPVRADQGSLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEGTVKSVVAPL 71
           +M   A++  L+YLEFVQ AA +        Y YAK  +GPL+PGV+ VEGTVK+VV P+
Sbjct: 25  EMEAAAEEERLRYLEFVQQAAAQVLVLXXXXYAYAKQGAGPLRPGVDHVEGTVKAVVGPV 84

Query: 72  YNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAPEVARSVASEVR 131
           Y++FHGVP+++LKF+DRKV ESV ++DR VPP VK           +AP +ARS A+EVR
Sbjct: 85  YDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVK-----------EAPGLARSAAAEVR 144

Query: 132 RAGLKDSVSGIVKSVYAKYEPSXXXXXXXXXXXXXXXXXXAWHKLNQLPVFPTVAQAILP 191
           +AGL  + +G+ KS  A+ EP                   AW  LN+LP+ P+V +A+LP
Sbjct: 145 QAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLP 204

Query: 192 TAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVF 231
            AA  + +YN  V   AK+G  V++YLPLVPTER+++VF
Sbjct: 205 AAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF 232

[Close]

BLAST of CsGy1G025730 vs. TrEMBL
Match: tr|A0A0A0M1J0|A0A0A0M1J0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569430 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 7.8e-118
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0


Query: 1   MADSDLSSQRQDMPVRADQGSLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MADSDLSSQRQDMPVRADQGSLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV
Sbjct: 1   MADSDLSSQRQDMPVRADQGSLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVAPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAP 120
           EGTVKSVVAPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAP
Sbjct: 61  EGTVKSVVAPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAP 120

Query: 121 EVARSVASEVRRAGLKDSVSGIVKSVYAKYEPSXXXXXXXXXXXXXXXXXXAWHKLNQLP 180
           EVARSVASEVRRAGLKDSVSGIVKSVYAKYEPSXXXXXXXXXXXXXXXXXXAWHKLNQLP
Sbjct: 121 EVARSVASEVRRAGLKDSVSGIVKSVYAKYEPSXXXXXXXXXXXXXXXXXXAWHKLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240
           VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL
Sbjct: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

[Close]

BLAST of CsGy1G025730 vs. TrEMBL
Match: tr|A0A1S3BP12|A0A1S3BP12_CUCME (REF/SRPP-like protein At3g05500 OS=Cucumis melo OX=3656 GN=LOC103492163 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 7.6e-89
Identity = 199/242 (82.23%), Postives = 201/242 (83.06%), Query Frame = 0


Query: 1   MADSDLSSQRQDMPVRADQGSLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MADSD SSQRQDM VRAD+  LKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV
Sbjct: 1   MADSDHSSQRQDMAVRADEDRLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVAPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAP 120
           EGTVKSVV PL NKFHGVPIEVLKFVDRKVDESVTK                        
Sbjct: 61  EGTVKSVVGPLCNKFHGVPIEVLKFVDRKVDESVTKXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 EVARSVASEVRRAGLKDSVSGIVKSVYAKYEPSXXXXXXXXXXXXXXXXXXAWHKLNQLP 180
                      R+GLKDSVSGIVKSVYAKYEPSXXXXXXXXXXXXXXXXXXAWHKLNQLP
Sbjct: 121 XXXXXXXXXXXRSGLKDSVSGIVKSVYAKYEPSXXXXXXXXXXXXXXXXXXAWHKLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240
           VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL
Sbjct: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

[Close]

BLAST of CsGy1G025730 vs. TrEMBL
Match: tr|A0A2I4H1M9|A0A2I4H1M9_9ROSI (REF/SRPP-like protein At3g05500 OS=Juglans regia OX=51240 GN=LOC109012714 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 7.9e-78
Identity = 170/242 (70.25%), Postives = 194/242 (80.17%), Query Frame = 0


Query: 1   MADSDLSSQRQDMPVRADQGSLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MA+ DL SQ   M    +Q  LKYLEFVQ A   A  CF N+Y YAK +SGPLKPGVETV
Sbjct: 1   MAEGDLRSQ-DGMTREEEQMRLKYLEFVQVATIHAAVCFSNLYCYAKGKSGPLKPGVETV 60

Query: 61  EGTVKSVVAPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAP 120
           EGTVKSVV P+Y+KFH VP+EVLK+VDRKVD SVT++DR VPP +KQASSQA  AAQ AP
Sbjct: 61  EGTVKSVVGPVYDKFHDVPVEVLKYVDRKVDASVTELDRRVPPIIKQASSQAFSAAQSAP 120

Query: 121 EVARSVASEVRRAGLKDSVSGIVKSVYAKYEPSXXXXXXXXXXXXXXXXXXAWHKLNQLP 180
            VAR+VASEV+RAG+ D+ SGI KSVY K EP XXXXXXXXXXXXX     AW KLNQLP
Sbjct: 121 VVARAVASEVKRAGVVDTASGIAKSVYTKCEPXXXXXXXXXXXXXXQCAVSAWRKLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240
           +FP VAQ ++PTAAYCTEKYN+TVR +A+KGYKVSSYLPLVPTE+IAKVF  +G E EPL
Sbjct: 181 LFPQVAQVVVPTAAYCTEKYNQTVRDTAEKGYKVSSYLPLVPTEKIAKVFRGDGSESEPL 240

Query: 241 VN 243
           V+
Sbjct: 241 VS 241

[Close]

BLAST of CsGy1G025730 vs. TrEMBL
Match: tr|A0A2I4HR73|A0A2I4HR73_9ROSI (REF/SRPP-like protein At3g05500 OS=Juglans regia OX=51240 GN=LOC109020594 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 2.3e-77
Identity = 169/242 (69.83%), Postives = 194/242 (80.17%), Query Frame = 0


Query: 1   MADSDLSSQRQDMPVRADQGSLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MA+ DL SQ   M    +Q  LKYLEFVQ A   A  CF N+Y YAK +SGPLKPGVETV
Sbjct: 1   MAEGDLRSQ-DGMTREEEQMRLKYLEFVQVATIHAAVCFSNLYCYAKGKSGPLKPGVETV 60

Query: 61  EGTVKSVVAPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAP 120
           EGTVKSVV P+Y+KFH VP+EVLK+VDRKVD SVT++DR VPP +KQASSQA  AAQ AP
Sbjct: 61  EGTVKSVVGPVYDKFHDVPVEVLKYVDRKVDASVTELDRRVPPIIKQASSQAFSAAQSAP 120

Query: 121 EVARSVASEVRRAGLKDSVSGIVKSVYAKYEPSXXXXXXXXXXXXXXXXXXAWHKLNQLP 180
            VAR+VASEV+RAG+ D+ SGI KSVY K EP XXXXXXXXXXXXX     AW KLNQLP
Sbjct: 121 VVARAVASEVKRAGVVDTASGIAKSVYTKCEPXXXXXXXXXXXXXXQCAVSAWRKLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240
           +FP VAQ ++PTAA+CTEKYN+TVR +A+KGYKVSSYLPLVPTE+IAKVF  +G E EPL
Sbjct: 181 LFPQVAQVVVPTAAFCTEKYNQTVRDTAEKGYKVSSYLPLVPTEKIAKVFRGDGSESEPL 240

Query: 241 VN 243
           V+
Sbjct: 241 VS 241

[Close]

BLAST of CsGy1G025730 vs. TrEMBL
Match: tr|A0A218VRE9|A0A218VRE9_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr020220 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 8.7e-77
Identity = 168/241 (69.71%), Postives = 196/241 (81.33%), Query Frame = 0


Query: 1   MADSDLSSQRQDMPVRADQGSLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MAD D+  +     V  ++  LKYLEFVQ AA  A  CF N+YGYAKD+SGPLKPGVETV
Sbjct: 1   MADGDVQEK-----VIGEEERLKYLEFVQVAAVHAALCFLNLYGYAKDKSGPLKPGVETV 60

Query: 61  EGTVKSVVAPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAP 120
           EGTVK+VV P+Y+KFH VPIEVLKFVDRK+DESVTK+D+ VPP VKQASSQA  AAQ+AP
Sbjct: 61  EGTVKTVVGPVYDKFHDVPIEVLKFVDRKIDESVTKLDKQVPPVVKQASSQAFSAAQRAP 120

Query: 121 EVARSVASEVRRAGLKDSVSGIVKSVYAKYEPSXXXXXXXXXXXXXXXXXXAWHKLNQLP 180
             A+++ASEV+RAG+ D+ SGI KSVY KYE  XXXXXXXXXXXXXXX    W KLN+LP
Sbjct: 121 VAAQTMASEVKRAGVVDTASGIAKSVYTKYEXXXXXXXXXXXXXXXXXAASTWRKLNRLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240
           +FP VAQ  +PTAAYC+EKYNETVR+SA+KGYKVS+YLPLVPTE+IAKVF  +  E EPL
Sbjct: 181 LFPQVAQVFVPTAAYCSEKYNETVRSSAEKGYKVSTYLPLVPTEKIAKVFRDDVPEAEPL 236

Query: 241 V 242
           V
Sbjct: 241 V 236

The following BLAST results are available for this feature:

BLAST of CsGy1G025730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135611.1	1.2e-117	100.00	PREDICTED: REF/SRPP-like protein At3g05500 [Cucumis sativus] >KGN66066.1 hypothe...	[more]
XP_022933698.1	7.4e-96	82.64	REF/SRPP-like protein At3g05500 [Cucurbita moschata]	[more]
XP_023530281.1	3.5e-93	81.40	REF/SRPP-like protein At3g05500 [Cucurbita pepo subsp. pepo]	[more]
XP_022969922.1	3.0e-89	78.51	REF/SRPP-like protein At3g05500 [Cucurbita maxima]	[more]
XP_008450634.1	1.2e-88	82.23	PREDICTED: REF/SRPP-like protein At3g05500 [Cucumis melo]	[more]

BLAST of CsGy1G025730 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G05500.1	3.2e-69	63.29	Rubber elongation factor protein (REF)	[more]
AT2G47780.1	5.2e-43	43.40	Rubber elongation factor protein (REF)	[more]
AT1G67360.2	5.6e-29	36.79	Rubber elongation factor protein (REF)	[more]

BLAST of CsGy1G025730 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9MA63\|Y3550_ARATH	5.8e-68	63.29	REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana OX=3702 GN=At3g05500 PE=...	[more]
sp\|Q9SW70\|SRP_VITRI	2.4e-61	56.96	Stress-related protein OS=Vitis riparia OX=96939 GN=SRP PE=2 SV=1	[more]
sp\|Q41112\|SRP_PHAVU	1.9e-50	57.29	Stress-related protein OS=Phaseolus vulgaris OX=3885 GN=SRP PE=2 SV=1	[more]
sp\|A2Y0H2\|Y5513_ORYSI	6.1e-49	46.58	REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_0...	[more]
sp\|Q9FRA7\|Y5513_ORYSJ	6.1e-49	46.58	REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonic...	[more]

BLAST of CsGy1G025730 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0M1J0\|A0A0A0M1J0_CUCSA	7.8e-118	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569430 PE=4 SV=1	[more]
tr\|A0A1S3BP12\|A0A1S3BP12_CUCME	7.6e-89	82.23	REF/SRPP-like protein At3g05500 OS=Cucumis melo OX=3656 GN=LOC103492163 PE=4 SV=...	[more]
tr\|A0A2I4H1M9\|A0A2I4H1M9_9ROSI	7.9e-78	70.25	REF/SRPP-like protein At3g05500 OS=Juglans regia OX=51240 GN=LOC109012714 PE=4 S...	[more]
tr\|A0A2I4HR73\|A0A2I4HR73_9ROSI	2.3e-77	69.83	REF/SRPP-like protein At3g05500 OS=Juglans regia OX=51240 GN=LOC109020594 PE=4 S...	[more]
tr\|A0A218VRE9\|A0A218VRE9_PUNGR	8.7e-77	69.71	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr020220 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008802	REF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0080186	developmental vegetative growth
biological_process	GO:0034389	lipid particle organization
biological_process	GO:0019915	lipid storage
biological_process	GO:0045927	positive regulation of growth
biological_process	GO:1902584	positive regulation of response to water deprivation
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005811	lipid particle
cellular_component	GO:0005773	vacuole
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G025730.1	CsGy1G025730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008802	Rubber elongation factor	PFAM	PF05755	REF	coord: 18..231 e-value: 3.6E-90 score: 301.2
IPR008802	Rubber elongation factor	PANTHER	PTHR33732	FAMILY NOT NAMED	coord: 1..240
None	No IPR available	PANTHER	PTHR33732:SF3	SUBFAMILY NOT NAMED	coord: 1..240

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G025730	Cla005222	Watermelon (97103) v1	cgybwmB022
CsGy1G025730	Csa1G569430	Cucumber (Chinese Long) v2	cgybcuB002
CsGy1G025730	MELO3C015310	Melon (DHL92) v3.5.1	cgybmeB038
CsGy1G025730	ClCG03G017110	Watermelon (Charleston Gray)	cgybwcgB043
CsGy1G025730	CSPI01G26490	Wild cucumber (PI 183967)	cgybcpiB002
CsGy1G025730	CmaCh10G011190	Cucurbita maxima (Rimu)	cgybcmaB016
CsGy1G025730	CmaCh11G011370	Cucurbita maxima (Rimu)	cgybcmaB042
CsGy1G025730	CmoCh11G011790	Cucurbita moschata (Rifu)	cgybcmoB039
CsGy1G025730	CmoCh10G011980	Cucurbita moschata (Rifu)	cgybcmoB019
CsGy1G025730	Lsi06G001150	Bottle gourd (USVL1VR-Ls)	cgyblsiB055
CsGy1G025730	Cp4.1LG04g00510	Cucurbita pepo (Zucchini)	cgybcpeB129
CsGy1G025730	Cp4.1LG18g00510	Cucurbita pepo (Zucchini)	cgybcpeB043
CsGy1G025730	MELO3C015310.2	Melon (DHL92) v3.6.1	cgybmedB032
CsGy1G025730	CsaV3_1G038850	Cucumber (Chinese Long) v3	cgybcucB001
CsGy1G025730	Cla97C03G067450	Watermelon (97103) v2	cgybwmbB041
CsGy1G025730	Bhi02G001756	Wax gourd	cgybwgoB106
CsGy1G025730	Carg25029	Silver-seed gourd	carcgybB0260

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G025730	Watermelon (97103) v1	cgybwmB041
CsGy1G025730	Watermelon (97103) v1	cgybwmB068
CsGy1G025730	Wild cucumber (PI 183967)	cgybcpiB024
CsGy1G025730	Cucumber (Chinese Long) v3	cgybcucB022
CsGy1G025730	Cucumber (Chinese Long) v3	cgybcucB030
CsGy1G025730	Watermelon (97103) v2	cgybwmbB061
CsGy1G025730	Wax gourd	cgybwgoB014
CsGy1G025730	Wax gourd	cgybwgoB080
CsGy1G025730	Cucumber (Gy14) v2	cgybcgybB012
CsGy1G025730	Cucumber (Gy14) v2	cgybcgybB021
CsGy1G025730	Cucurbita maxima (Rimu)	cgybcmaB054
CsGy1G025730	Cucurbita moschata (Rifu)	cgybcmoB050
CsGy1G025730	Cucurbita moschata (Rifu)	cgybcmoB128
CsGy1G025730	Cucurbita pepo (Zucchini)	cgybcpeB028
CsGy1G025730	Cucurbita pepo (Zucchini)	cgybcpeB143
CsGy1G025730	Cucumber (Chinese Long) v2	cgybcuB025
CsGy1G025730	Bottle gourd (USVL1VR-Ls)	cgyblsiB012
CsGy1G025730	Bottle gourd (USVL1VR-Ls)	cgyblsiB054
CsGy1G025730	Melon (DHL92) v3.5.1	cgybmeB070
CsGy1G025730	Watermelon (Charleston Gray)	cgybwcgB029