ClCG03G017110 (gene) Watermelon (Charleston Gray)

Overview
NameClCG03G017110
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionRubber elongation factor
LocationCG_Chr03 : 32279744 .. 32282173 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCCACCGTGGCCGTCCGTTTTCACCGACTCTCTTGCCGCGTTCTTCTCCCTTATAAATCCTTAATCTTCTCTTCTTCCCATTCCATCGATTATATCGCCAACCATTTCGATTTCATTTCCTCCCATCTCATCTTCCTTCCATTTCCGATCTTAAACTCCCTTCCAATTTCCCTTTGTGTTTTGGCTATGGCTGAATCCAATACTTCGTCGCACCACCAGGAAATGGTAAGACTAACACTAAGACGAACACCCTCTTTTCATTCTCTCTTTACTCAGAATTCGTTGGGATCCGTTGATTGAACTGTTTGGGGTTTTTTGTTTTGTGTAGGCGGCTAGGGCAGAGGAGGAGAGGCTGAAGTATTTGGAGTTCGTTCAAACGGCGGCGTTTCGAGCCACGGAGTGTTTCTTTAATGTTTATGGCTATGCGAAGGACCGGTCCGGTCCACTGAAGCCCGGCGTTGAGACCGTTGAGGGCACTGTGAAGTCCGTTGTTGGTCCTTTGTATAATAAGTTCCACGGCGTTCCGATTGAAGTTCTTAAATTCGTCGATCGCAAGGTTTCTTTTCTTTCTTATGTGAATCATTTAATTATTTCAATTTCTAATTTCAATGTTTGATTCTCAAACGAAGTTCTCTTCGATTTCTTCTTGGCTGGATGGATGTAACAATTAACTTGTTCTCTGAGAAATCTGCTCAGGTTTTGTAGGTTAAATTACAAATTTGGTTAGGAAAAAGTTAGAATTTAGTTTTTGTGACTTATAATTAGAATCTAGTTTTGATAAAATCTTCGTTAATAGTTCCTACATGAGGCTTTAGGTAATCCTCAAAGCCTAGGATTTAGAATCCTGGCCTAGGATTTAGAGCCCTAATCTCGATATTGTTCTGTCTATGTGAACGCTCCAAGCCTAGAATAAGTTATGCTGGCCTCGACATTCCTTTAAGGAGGCTTTGTCTTTACTTACATGCTTAAATTTATCATATTTCATATCTCAGTTTCATTCATGTTCTTCTTCTGAATTCACGTAAACCACAAGGACCAAATTCTAAAACTATTGGGACTAAATTCTAACTGGTAATTTGATCAATTTTAAGTTTAAATTCCATGTTGTAGATGTTTCGTTGTGGTTTCTGCCCCGGTTGTAGTCTCTTATTTTTGGTTTTGATACTTATCTTTGTGTTGTGTTCATGAAATTGATAGCATAGCTTCACGTATATTTATTAAATATGGACGTGTATGAGGTTGAGTATTATGTGAGTGGATAGCACAAGGTTCAAACTGGATATTTTCTTGAAGATCAAGGACTAAATGGTTATTGTGTAAAAGTTGGGGAGCAGTGTTTATTTTTTGAGGAGATCAAACCAGGGAAGTCCTGACTGAACATTCTCATCTAAATGGAGTTCATACCAATTTTGTAATGTCAAGCCCAAAATGGAGTAATGATTAAAATTGAAAAATTTAAAGGATTGAGGTTGAAATTAGAAGTTAAAAGATTTCGTATAGTTAGTCAAAGACTCAAAGCTATGTTGTTTCACTTTGAATGAAGCCAAAAACTGAATGAGTGTTGAGCATTAGAAGATTGAGAAATATTTTACTTTACAGGAAACTCACTTTGATTCATGATAAATGGGCAGGTGGACGAGTCAGTGACGAAGATCGACCGCCACGTTCCTCCAACAGTCAAGCAGGCCTCATCACAGGCTATGTCAGCTGCTCAGCAGGCACCTGAAGTCGCTCGAAATGTAGCCTCTGAGGTCCGACGCACTGGCCTAAAAGACTCCGTGACTGGGATTGTGAAATCTGTGTATGCCAAGTATGAGCCAACTGCAAAGCAACTCTACTCCAAATACGAGCCCAAGGCCGAGCAGTGCGCAGTTTCAGCATGGCACAAGCTGAACCAGCTACCTGTCTTCCCCACCGTTGCACAGGCCATCTTGCCAACAGCGGCGTACTGCACAGAGAAATACAACGAGACCGTACGAACCTCTGCCGAGAAGGGATACAAGGTCTCTTCATACCTTCCATTGGTCCCTACTGAGAGGATTGCCAAAGTTTTCAGCAAGAACGGAATTGAAATGAAGCCTTTGGTGAATTAAGAGCTAAACCTGGTTTTTCTTTTTATGATATGTAAGAAAAAACACATTATGAATGTTTTTGTCATAGGGGACGATTCACTTCCAATATCTGAGAAATTATTCGATGTGGCTGTCACATTTTGATGATATCTTGAGTTGTATTGGAGGTGTACTTGTACGTTGTAGTTCTTCTGAGCCTTATGTTCCCTTAGGCATCAGAGGTAGCCATGACATTTTATTGTTGAGGGGTTTTTTCAAGACAGATATTAATCTACATAGTCTTGATATCATACGGGAAAAAATAGTTCAAATCTTTTTGTCTCCTTTTTAGTATTTGCCTTTCCATTTTTCTAGTCG

mRNA sequence

TTCCACCGTGGCCGTCCGTTTTCACCGACTCTCTTGCCGCGTTCTTCTCCCTTATAAATCCTTAATCTTCTCTTCTTCCCATTCCATCGATTATATCGCCAACCATTTCGATTTCATTTCCTCCCATCTCATCTTCCTTCCATTTCCGATCTTAAACTCCCTTCCAATTTCCCTTTGTGTTTTGGCTATGGCTGAATCCAATACTTCGTCGCACCACCAGGAAATGGCGGCTAGGGCAGAGGAGGAGAGGCTGAAGTATTTGGAGTTCGTTCAAACGGCGGCGTTTCGAGCCACGGAGTGTTTCTTTAATGTTTATGGCTATGCGAAGGACCGGTCCGGTCCACTGAAGCCCGGCGTTGAGACCGTTGAGGGCACTGTGAAGTCCGTTGTTGGTCCTTTGTATAATAAGTTCCACGGCGTTCCGATTGAAGTTCTTAAATTCGTCGATCGCAAGGTGGACGAGTCAGTGACGAAGATCGACCGCCACGTTCCTCCAACAGTCAAGCAGGCCTCATCACAGGCTATGTCAGCTGCTCAGCAGGCACCTGAAGTCGCTCGAAATGTAGCCTCTGAGGTCCGACGCACTGGCCTAAAAGACTCCGTGACTGGGATTGTGAAATCTGTGTATGCCAAGTATGAGCCAACTGCAAAGCAACTCTACTCCAAATACGAGCCCAAGGCCGAGCAGTGCGCAGTTTCAGCATGGCACAAGCTGAACCAGCTACCTGTCTTCCCCACCGTTGCACAGGCCATCTTGCCAACAGCGGCGTACTGCACAGAGAAATACAACGAGACCGTACGAACCTCTGCCGAGAAGGGATACAAGGTCTCTTCATACCTTCCATTGGTCCCTACTGAGAGGATTGCCAAAGTTTTCAGCAAGAACGGAATTGAAATGAAGCCTTTGGTGAATTAAGAGCTAAACCTGGTTTTTCTTTTTATGATATGTAAGAAAAAACACATTATGAATGTTTTTGTCATAGGGGACGATTCACTTCCAATATCTGAGAAATTATTCGATGTGGCTGTCACATTTTGATGATATCTTGAGTTGTATTGGAGGTGTACTTGTACGTTGTAGTTCTTCTGAGCCTTATGTTCCCTTAGGCATCAGAGGTAGCCATGACATTTTATTGTTGAGGGGTTTTTTCAAGACAGATATTAATCTACATAGTCTTGATATCATACGGGAAAAAATAGTTCAAATCTTTTTGTCTCCTTTTTAGTATTTGCCTTTCCATTTTTCTAGTCG

Coding sequence (CDS)

ATGGCTGAATCCAATACTTCGTCGCACCACCAGGAAATGGCGGCTAGGGCAGAGGAGGAGAGGCTGAAGTATTTGGAGTTCGTTCAAACGGCGGCGTTTCGAGCCACGGAGTGTTTCTTTAATGTTTATGGCTATGCGAAGGACCGGTCCGGTCCACTGAAGCCCGGCGTTGAGACCGTTGAGGGCACTGTGAAGTCCGTTGTTGGTCCTTTGTATAATAAGTTCCACGGCGTTCCGATTGAAGTTCTTAAATTCGTCGATCGCAAGGTGGACGAGTCAGTGACGAAGATCGACCGCCACGTTCCTCCAACAGTCAAGCAGGCCTCATCACAGGCTATGTCAGCTGCTCAGCAGGCACCTGAAGTCGCTCGAAATGTAGCCTCTGAGGTCCGACGCACTGGCCTAAAAGACTCCGTGACTGGGATTGTGAAATCTGTGTATGCCAAGTATGAGCCAACTGCAAAGCAACTCTACTCCAAATACGAGCCCAAGGCCGAGCAGTGCGCAGTTTCAGCATGGCACAAGCTGAACCAGCTACCTGTCTTCCCCACCGTTGCACAGGCCATCTTGCCAACAGCGGCGTACTGCACAGAGAAATACAACGAGACCGTACGAACCTCTGCCGAGAAGGGATACAAGGTCTCTTCATACCTTCCATTGGTCCCTACTGAGAGGATTGCCAAAGTTTTCAGCAAGAACGGAATTGAAATGAAGCCTTTGGTGAATTAA

Protein sequence

MAESNTSSHHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAPEVARNVASEVRRTGLKDSVTGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLPVFPTVAQAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKNGIEMKPLVN
Homology
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BLAST of ClCG03G017110 vs. Swiss-Prot
Match: Y3550_ARATH (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana GN=At3g05500 PE=1 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 1.4e-82
Identity = 147/225 (65.33%), Postives = 186/225 (82.67%), Query Frame = 1 

Query: 16  RAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEGTVKSVVGPLYNKF 75
           + E+ERLKYL+FVQ AA  A   F  +Y  AKD+SGPLKPGVE+VEG VK+VVGP+Y K+
Sbjct: 16  KEEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVGPVYEKY 75

Query: 76  HGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAPEVARNVASEVRRTGL 135
           H VP+EVLK++D+KVD SVT++DR VPP VKQ S+QA+SAAQ AP VAR +ASEVRR G+
Sbjct: 76  HDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAGV 135

Query: 136 KDSVTGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLPVFPTVAQAILPTAAY 195
            ++ +G+ KSVY+KYEP AK+LY+ YEPKAEQCAVSAW KLNQLP+FP +AQ  +PTAA+
Sbjct: 136 VETASGMAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLPLFPRLAQVAVPTAAF 195

Query: 196 CTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKNGIEMKPL 241
           C+EKYN+TV  +AEKGY+V+SY+PLVPTERI+K+F++   E +PL
Sbjct: 196 CSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAEEKAETEPL 240

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BLAST of ClCG03G017110 vs. Swiss-Prot
Match: SRP_VITRI (Stress-related protein OS=Vitis riparia GN=SRP PE=2 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 1.1e-74
Identity = 140/230 (60.87%), Postives = 176/230 (76.52%), Query Frame = 1 

Query: 1   MAESNTSSHHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MAES      Q      EE+RLKYL+FVQ AA     CF ++Y YAK+ SGPLKPGV+TV
Sbjct: 1   MAESEAKQ--QPETVHGEEKRLKYLDFVQVAAIYVIVCFSSLYEYAKENSGPLKPGVQTV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EGTVK+V+GP+Y KF+ VP E+L FVDRKV+ S+ +++RHVP  VK+AS QA++ AQ+AP
Sbjct: 61  EGTVKTVIGPVYEKFYDVPFELLMFVDRKVEASIYELERHVPSLVKRASCQAITVAQKAP 120

Query: 121 EVARNVASEVRRTGLKDSVTGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLP 180
           E+A  VASEV+R G+ D+   I K+VY+K EPTAK+L SKYEP AEQ AVSAW  LN+LP
Sbjct: 121 ELALAVASEVQRPGVVDTAKNITKNVYSKCEPTAKELCSKYEPVAEQYAVSAWRSLNRLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVF 231
           +FP VAQ ++PTAAY +EKYN++V  +AE+GY V+ YLPL+PTERIAKVF
Sbjct: 181 LFPQVAQVVVPTAAYWSEKYNQSVSYTAERGYTVALYLPLIPTERIAKVF 228

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BLAST of ClCG03G017110 vs. Swiss-Prot
Match: Y5513_ORYSI (REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica GN=OsI_017815 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 5.8e-60
Identity = 118/228 (51.75%), Postives = 157/228 (68.86%), Query Frame = 1 

Query: 3   ESNTSSHHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEG 62
           E  T     EM A AEEERL+YLEFVQ AA +        Y YAK  +GPL+PGV+ VEG
Sbjct: 16  EEVTVEKTPEMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEG 75

Query: 63  TVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAPEV 122
           TVK+VVGP+Y++FHGVP+++LKF+DRKV ESV ++DR VPP VK           +AP +
Sbjct: 76  TVKAVVGPVYDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVK-----------EAPGL 135

Query: 123 ARNVASEVRRTGLKDSVTGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLPVF 182
           AR+ A+EVR+ GL  + TG+ KS  A+ EP A+ LY++YEP AE+ A  AW  LN+LP+ 
Sbjct: 136 ARSAAAEVRQAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLV 195

Query: 183 PTVAQAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVF 231
           P+V +A+LP AA  + +YN  V   A++G  V++YLPLVPTER+++VF
Sbjct: 196 PSVTRAVLPAAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF 232

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BLAST of ClCG03G017110 vs. Swiss-Prot
Match: Y5513_ORYSJ (REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonica GN=Os05g0151300 PE=2 SV=2)

HSP 1 Score: 232.3 bits (591), Expect = 5.8e-60
Identity = 118/228 (51.75%), Postives = 157/228 (68.86%), Query Frame = 1 

Query: 3   ESNTSSHHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEG 62
           E  T     EM A AEEERL+YLEFVQ AA +        Y YAK  +GPL+PGV+ VEG
Sbjct: 16  EEVTVEKTPEMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEG 75

Query: 63  TVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAPEV 122
           TVK+VVGP+Y++FHGVP+++LKF+DRKV ESV ++DR VPP VK           +AP +
Sbjct: 76  TVKAVVGPVYDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVK-----------EAPGL 135

Query: 123 ARNVASEVRRTGLKDSVTGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLPVF 182
           AR+ A+EVR+ GL  + TG+ KS  A+ EP A+ LY++YEP AE+ A  AW  LN+LP+ 
Sbjct: 136 ARSAAAEVRQAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLV 195

Query: 183 PTVAQAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVF 231
           P+V +A+LP AA  + +YN  V   A++G  V++YLPLVPTER+++VF
Sbjct: 196 PSVTRAVLPAAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF 232

[Close]
BLAST of ClCG03G017110 vs. Swiss-Prot
Match: SRP_PHAVU (Stress-related protein OS=Phaseolus vulgaris GN=SRP PE=2 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 8.6e-56
Identity = 115/192 (59.90%), Postives = 135/192 (70.31%), Query Frame = 1 

Query: 42  VYGYAKDRSGPLKPGVETVEGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHV 101
           +Y YAK+R+GPLKPGV TVE  VK+VV P+Y++FH VP+E+LK+ DRKV E    +DRHV
Sbjct: 6   LYSYAKERAGPLKPGVNTVEDAVKTVVAPVYDRFHLVPVELLKYADRKVGE----LDRHV 65

Query: 102 PPTVKQASSQAMSAAQQAPEVARNVASEVRRTGLKDSVTGIVKSVYAKYEPTAKQLYSKY 161
           P  VK+ SSQA           R+V SEVRR G+                  AK +YSKY
Sbjct: 66  PSNVKKVSSQA-----------RSVVSEVRRDGVSTF---------------AKTVYSKY 125

Query: 162 EPKAEQCAVSAWHKLNQLPVFPTVAQAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLV 221
           EP AEQCAVSAW KLNQLP+FP VA A+LP AAYCTEKYNE + +SAEKGY+VS+YLPLV
Sbjct: 126 EPTAEQCAVSAWRKLNQLPLFPQVANAVLPKAAYCTEKYNEVIVSSAEKGYRVSAYLPLV 167

Query: 222 PTERIAKVFSKN 234
           PTE+IAKVFS N
Sbjct: 186 PTEKIAKVFSGN 167

[Close]
BLAST of ClCG03G017110 vs. TrEMBL
Match: A0A0A0M1J0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569430 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 9.1e-121
Identity = 220/242 (90.91%), Postives = 231/242 (95.45%), Query Frame = 1 

Query: 1   MAESNTSSHHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MA+S+ SS  Q+M  RA++  LKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV
Sbjct: 1   MADSDLSSQRQDMPVRADQGSLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EGTVKSVV PLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAM AAQQAP
Sbjct: 61  EGTVKSVVAPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAP 120

Query: 121 EVARNVASEVRRTGLKDSVTGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLP 180
           EVAR+VASEVRR GLKDSV+GIVKSVYAKYEP+AKQLYSKYEPKAEQCA SAWHKLNQLP
Sbjct: 121 EVARSVASEVRRAGLKDSVSGIVKSVYAKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKNGIEMKPL 240
           VFPTVAQAILPTAAYCTEKYNETVRTSA+KGYKVSSYLPLVPTERIAKVFSKNG+EM+PL
Sbjct: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

[Close]
BLAST of ClCG03G017110 vs. TrEMBL
Match: A0A0B0Q0B4_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_12676 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 2.0e-91
Identity = 166/236 (70.34%), Postives = 199/236 (84.32%), Query Frame = 1 

Query: 7   SSHHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEGTVKS 66
           S+  Q+MA   EE+RLKYLEFVQ AA  A  CF N+Y YAK+RSGPLKP VETVEGTVK 
Sbjct: 6   SNFQQDMAKEEEEQRLKYLEFVQVAAVHAALCFTNLYLYAKERSGPLKPSVETVEGTVKC 65

Query: 67  VVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAPEVARNV 126
           VVGP+Y+K+H VP+E LKFVD KV ESVTK+DR VPP +KQ S++A+SAAQ+APEVAR V
Sbjct: 66  VVGPVYDKYHDVPVEFLKFVDSKVGESVTKLDRRVPPVIKQVSTEAISAAQKAPEVARGV 125

Query: 127 ASEVRRTGLKDSVTGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLPVFPTVA 186
           ASEV R G+ ++ +G+ KSVY KYEPTAKQLY+KYEPKAEQCAVSAW KLN+LP+FP VA
Sbjct: 126 ASEVHRAGVVNTASGLAKSVYTKYEPTAKQLYAKYEPKAEQCAVSAWRKLNKLPLFPQVA 185

Query: 187 QAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKNGIEMKPLVN 243
             ++PTAAYC++KYNETV +SAEKGYKV+SYLPLVPTE+IAKVF +   EM+PLV+
Sbjct: 186 SVVVPTAAYCSDKYNETVVSSAEKGYKVASYLPLVPTEKIAKVFGEQTTEMEPLVS 241

[Close]
BLAST of ClCG03G017110 vs. TrEMBL
Match: A0A0D2PGY1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G300000 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 3.7e-90
Identity = 164/236 (69.49%), Postives = 197/236 (83.47%), Query Frame = 1 

Query: 7   SSHHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEGTVKS 66
           S+  Q+MA   EE+RLKYLEFVQ AA  A  CF N+Y YAK+R GPLKP VETVEGTVKS
Sbjct: 6   SNFQQDMAKEEEEQRLKYLEFVQVAAVHAALCFTNLYLYAKERLGPLKPSVETVEGTVKS 65

Query: 67  VVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAPEVARNV 126
           VVGP+Y+K+H VP+E LKFVD KV ESVTK+DR VPP +KQ S++A+ AAQ+APEVAR V
Sbjct: 66  VVGPVYDKYHDVPVEFLKFVDSKVGESVTKLDRQVPPVIKQVSTEAILAAQKAPEVARGV 125

Query: 127 ASEVRRTGLKDSVTGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLPVFPTVA 186
           ASEV R G+ ++ +G+ KSVY KYEPTAK+LY+KYEPKAEQCAVSAW KLN LP+FP VA
Sbjct: 126 ASEVHRAGVVNTASGLAKSVYTKYEPTAKELYAKYEPKAEQCAVSAWRKLNMLPLFPQVA 185

Query: 187 QAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKNGIEMKPLVN 243
             ++PTAAYC++KYNETV +SAEKGYKV+SYLPLVPTE+IAKVF +   EM+PLV+
Sbjct: 186 SVVVPTAAYCSDKYNETVVSSAEKGYKVASYLPLVPTEKIAKVFGEQTTEMQPLVS 241

[Close]
BLAST of ClCG03G017110 vs. TrEMBL
Match: B9RFA8_RICCO (Rubber elongation factor protein, putative OS=Ricinus communis GN=RCOM_1433280 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 4.1e-89
Identity = 166/242 (68.60%), Postives = 199/242 (82.23%), Query Frame = 1 

Query: 1   MAESNTSSHHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MAE N +   Q+  A+  EERLKYLEFVQ AA  A   F N+Y YAKD++GPLKPGVETV
Sbjct: 1   MAEQNVNL--QQQMAKENEERLKYLEFVQVAALHAVMTFANLYVYAKDKAGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EGTVKSVVGP+Y+KFH VPIEVLKFVDRKVDESVTK+DR VPP VKQ S+QA S A++AP
Sbjct: 61  EGTVKSVVGPVYDKFHDVPIEVLKFVDRKVDESVTKLDRRVPPVVKQVSAQAYSVAREAP 120

Query: 121 EVARNVASEVRRTGLKDSVTGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLP 180
             AR VASEV+RTG+K++ +G+ K++YA YEP AK+LYSKYEPKAEQCAVSAW KLNQLP
Sbjct: 121 VAARAVASEVQRTGVKETASGLAKTLYAMYEPKAKELYSKYEPKAEQCAVSAWRKLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKNGIEMKPL 240
           +FP VAQ  +PTAAYC+EKYN+TV ++AEKGY+VSSYLPLVPT++IA+VF     E  P+
Sbjct: 181 LFPQVAQVFVPTAAYCSEKYNQTVVSTAEKGYRVSSYLPLVPTQKIAQVFRNEVPESAPI 240

Query: 241 VN 243
            +
Sbjct: 241 AS 240

[Close]
BLAST of ClCG03G017110 vs. TrEMBL
Match: C9E7B4_MORAL (Rubber elongation factor OS=Morus alba PE=2 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 5.4e-89
Identity = 162/242 (66.94%), Postives = 201/242 (83.06%), Query Frame = 1 

Query: 1   MAESNTSSHHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MA+ ++S   Q    +AEE+RLKYLEF+Q A         N+YG AK++SGPLKPGVETV
Sbjct: 1   MAQEDSSFPQQMDKDKAEEQRLKYLEFIQVAVIHTIVYLSNLYGKAKEKSGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EGTVKSVVGP+Y K + +PIE+LKF+DRKVD SVT++DRHVP T+KQ SSQA SAAQ+AP
Sbjct: 61  EGTVKSVVGPVYEKVYDIPIELLKFIDRKVDASVTELDRHVPATLKQVSSQAFSAAQKAP 120

Query: 121 EVARNVASEVRRTGLKDSVTGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLP 180
           EVAR++ASEV+R G+KD+ +GI K+V+ KYEP AK+LY+KYEPKAEQCAV+AW KLNQLP
Sbjct: 121 EVARSLASEVQRAGVKDTASGIAKTVFTKYEPAAKELYAKYEPKAEQCAVTAWRKLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKNGIEMKPL 240
           +FP VA  ++PTAAY TEKYN+TV ++AEKGYKVSSYLPLVP E+I KVFS+NG E +PL
Sbjct: 181 LFPKVADVVVPTAAYYTEKYNQTVISTAEKGYKVSSYLPLVPVEKIVKVFSENGAEFEPL 240

Query: 241 VN 243
           V+
Sbjct: 241 VS 242

[Close]
BLAST of ClCG03G017110 vs. TAIR10
Match: AT3G05500.1 (AT3G05500.1 Rubber elongation factor protein (REF))

HSP 1 Score: 307.4 bits (786), Expect = 7.9e-84
Identity = 147/225 (65.33%), Postives = 186/225 (82.67%), Query Frame = 1 

Query: 16  RAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEGTVKSVVGPLYNKF 75
           + E+ERLKYL+FVQ AA  A   F  +Y  AKD+SGPLKPGVE+VEG VK+VVGP+Y K+
Sbjct: 16  KEEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVGPVYEKY 75

Query: 76  HGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAPEVARNVASEVRRTGL 135
           H VP+EVLK++D+KVD SVT++DR VPP VKQ S+QA+SAAQ AP VAR +ASEVRR G+
Sbjct: 76  HDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAGV 135

Query: 136 KDSVTGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLPVFPTVAQAILPTAAY 195
            ++ +G+ KSVY+KYEP AK+LY+ YEPKAEQCAVSAW KLNQLP+FP +AQ  +PTAA+
Sbjct: 136 VETASGMAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLPLFPRLAQVAVPTAAF 195

Query: 196 CTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKNGIEMKPL 241
           C+EKYN+TV  +AEKGY+V+SY+PLVPTERI+K+F++   E +PL
Sbjct: 196 CSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAEEKAETEPL 240

[Close]
BLAST of ClCG03G017110 vs. TAIR10
Match: AT2G47780.1 (AT2G47780.1 Rubber elongation factor protein (REF))

HSP 1 Score: 184.1 bits (466), Expect = 1.0e-46
Identity = 96/216 (44.44%), Postives = 133/216 (61.57%), Query Frame = 1 

Query: 18  EEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEGTVKSVVGPLYNKFHG 77
           +E +LK+LEF+Q AA     CF  +Y  AKD +GPLK GVE +E  V++V+ PLY KFH 
Sbjct: 37  DEMKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKFHD 96

Query: 78  VPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAPEVARNVASEVRRTGLKD 137
           VP ++L FVDRKVD+    ++ +VP  VKQASSQA++           VA+EV+RTG+ D
Sbjct: 97  VPFKLLLFVDRKVDDVFFDVETYVPSLVKQASSQALT-----------VATEVQRTGVVD 156

Query: 138 SVTGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLPVFPTVAQAILPTAAYCT 197
           +   I +SV             KYEP AE  A + W  LNQLP+FP VA  ++PTA Y +
Sbjct: 157 TTKSIARSV-----------RDKYEPAAEYYAATLWRLLNQLPLFPEVAHLVIPTAFYWS 216

Query: 198 EKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKN 234
           EKYN+ VR   ++ Y  + YLP++P E+I+ +  ++
Sbjct: 217 EKYNDAVRYVGDRDYFGAEYLPMIPIEKISDILEQD 230

[Close]
BLAST of ClCG03G017110 vs. TAIR10
Match: AT1G67360.2 (AT1G67360.2 Rubber elongation factor protein (REF))

HSP 1 Score: 131.0 bits (328), Expect = 1.0e-30
Identity = 81/222 (36.49%), Postives = 104/222 (46.85%), Query Frame = 1 

Query: 17  AEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEGTVKSVVGPLYNKFH 76
           ++E  LK+L FV+ A         N+Y YAK  SGPLK  VE VEG V +VV P+Y KF 
Sbjct: 8   SKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFK 67

Query: 77  GVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAPEVARNVASEVRRTGLK 136
            VP  +L F+D KV E   K D H PP  K+  +QA     +A E A++   E R  G K
Sbjct: 68  DVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGGPK 127

Query: 137 DSVTGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLPVFPTVAQAILPTAAYC 196
            +        YA  E         Y+      +V  W KLNQ      +    LP AA+ 
Sbjct: 128 AAFN------YAATE---------YKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHF 187

Query: 197 TEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKNGIEMK 239
           + +YN+ V      GY +  YLPLVP + I K + K     K
Sbjct: 188 SSRYNDLVTDMTNMGYSLVGYLPLVPVDDIVKAYEKEDARRK 214

[Close]
BLAST of ClCG03G017110 vs. NCBI nr
Match: gi|659099505|ref|XP_008450634.1| (PREDICTED: REF/SRPP-like protein At3g05500 [Cucumis melo])

HSP 1 Score: 449.1 bits (1154), Expect = 4.8e-123
Identity = 224/242 (92.56%), Postives = 235/242 (97.11%), Query Frame = 1 

Query: 1   MAESNTSSHHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MA+S+ SS  Q+MA RA+E+RLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV
Sbjct: 1   MADSDHSSQRQDMAVRADEDRLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EGTVKSVVGPL NKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVK ASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLCNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKHASSQAMSAAQQAP 120

Query: 121 EVARNVASEVRRTGLKDSVTGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLP 180
           EVARNVASEVRR+GLKDSV+GIVKSVYAKYEP+AKQLYSKYEPKAEQCA SAWHKLNQLP
Sbjct: 121 EVARNVASEVRRSGLKDSVSGIVKSVYAKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKNGIEMKPL 240
           VFPTVAQAILPTAAYCTEKYNETVRTSA+KGYKVSSYLPLVPTERIAKVFSKNG+EM+PL
Sbjct: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

[Close]
BLAST of ClCG03G017110 vs. NCBI nr
Match: gi|449435657|ref|XP_004135611.1| (PREDICTED: REF/SRPP-like protein At3g05500 [Cucumis sativus])

HSP 1 Score: 441.0 bits (1133), Expect = 1.3e-120
Identity = 220/242 (90.91%), Postives = 231/242 (95.45%), Query Frame = 1 

Query: 1   MAESNTSSHHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MA+S+ SS  Q+M  RA++  LKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV
Sbjct: 1   MADSDLSSQRQDMPVRADQGSLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EGTVKSVV PLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAM AAQQAP
Sbjct: 61  EGTVKSVVAPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAP 120

Query: 121 EVARNVASEVRRTGLKDSVTGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLP 180
           EVAR+VASEVRR GLKDSV+GIVKSVYAKYEP+AKQLYSKYEPKAEQCA SAWHKLNQLP
Sbjct: 121 EVARSVASEVRRAGLKDSVSGIVKSVYAKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKNGIEMKPL 240
           VFPTVAQAILPTAAYCTEKYNETVRTSA+KGYKVSSYLPLVPTERIAKVFSKNG+EM+PL
Sbjct: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

[Close]
BLAST of ClCG03G017110 vs. NCBI nr
Match: gi|728850786|gb|KHG30229.1| (hypothetical protein F383_12676 [Gossypium arboreum])

HSP 1 Score: 343.6 bits (880), Expect = 2.8e-91
Identity = 166/236 (70.34%), Postives = 199/236 (84.32%), Query Frame = 1 

Query: 7   SSHHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEGTVKS 66
           S+  Q+MA   EE+RLKYLEFVQ AA  A  CF N+Y YAK+RSGPLKP VETVEGTVK 
Sbjct: 6   SNFQQDMAKEEEEQRLKYLEFVQVAAVHAALCFTNLYLYAKERSGPLKPSVETVEGTVKC 65

Query: 67  VVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAPEVARNV 126
           VVGP+Y+K+H VP+E LKFVD KV ESVTK+DR VPP +KQ S++A+SAAQ+APEVAR V
Sbjct: 66  VVGPVYDKYHDVPVEFLKFVDSKVGESVTKLDRRVPPVIKQVSTEAISAAQKAPEVARGV 125

Query: 127 ASEVRRTGLKDSVTGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLPVFPTVA 186
           ASEV R G+ ++ +G+ KSVY KYEPTAKQLY+KYEPKAEQCAVSAW KLN+LP+FP VA
Sbjct: 126 ASEVHRAGVVNTASGLAKSVYTKYEPTAKQLYAKYEPKAEQCAVSAWRKLNKLPLFPQVA 185

Query: 187 QAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKNGIEMKPLVN 243
             ++PTAAYC++KYNETV +SAEKGYKV+SYLPLVPTE+IAKVF +   EM+PLV+
Sbjct: 186 SVVVPTAAYCSDKYNETVVSSAEKGYKVASYLPLVPTEKIAKVFGEQTTEMEPLVS 241

[Close]
BLAST of ClCG03G017110 vs. NCBI nr
Match: gi|823197092|ref|XP_012434168.1| (PREDICTED: REF/SRPP-like protein At3g05500 [Gossypium raimondii])

HSP 1 Score: 339.3 bits (869), Expect = 5.4e-90
Identity = 164/236 (69.49%), Postives = 197/236 (83.47%), Query Frame = 1 

Query: 7   SSHHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEGTVKS 66
           S+  Q+MA   EE+RLKYLEFVQ AA  A  CF N+Y YAK+R GPLKP VETVEGTVKS
Sbjct: 6   SNFQQDMAKEEEEQRLKYLEFVQVAAVHAALCFTNLYLYAKERLGPLKPSVETVEGTVKS 65

Query: 67  VVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAPEVARNV 126
           VVGP+Y+K+H VP+E LKFVD KV ESVTK+DR VPP +KQ S++A+ AAQ+APEVAR V
Sbjct: 66  VVGPVYDKYHDVPVEFLKFVDSKVGESVTKLDRQVPPVIKQVSTEAILAAQKAPEVARGV 125

Query: 127 ASEVRRTGLKDSVTGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLPVFPTVA 186
           ASEV R G+ ++ +G+ KSVY KYEPTAK+LY+KYEPKAEQCAVSAW KLN LP+FP VA
Sbjct: 126 ASEVHRAGVVNTASGLAKSVYTKYEPTAKELYAKYEPKAEQCAVSAWRKLNMLPLFPQVA 185

Query: 187 QAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKNGIEMKPLVN 243
             ++PTAAYC++KYNETV +SAEKGYKV+SYLPLVPTE+IAKVF +   EM+PLV+
Sbjct: 186 SVVVPTAAYCSDKYNETVVSSAEKGYKVASYLPLVPTEKIAKVFGEQTTEMQPLVS 241

[Close]
BLAST of ClCG03G017110 vs. NCBI nr
Match: gi|255542728|ref|XP_002512427.1| (PREDICTED: REF/SRPP-like protein At3g05500 [Ricinus communis])

HSP 1 Score: 335.9 bits (860), Expect = 5.9e-89
Identity = 166/242 (68.60%), Postives = 199/242 (82.23%), Query Frame = 1 

Query: 1   MAESNTSSHHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MAE N +   Q+  A+  EERLKYLEFVQ AA  A   F N+Y YAKD++GPLKPGVETV
Sbjct: 1   MAEQNVNL--QQQMAKENEERLKYLEFVQVAALHAVMTFANLYVYAKDKAGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EGTVKSVVGP+Y+KFH VPIEVLKFVDRKVDESVTK+DR VPP VKQ S+QA S A++AP
Sbjct: 61  EGTVKSVVGPVYDKFHDVPIEVLKFVDRKVDESVTKLDRRVPPVVKQVSAQAYSVAREAP 120

Query: 121 EVARNVASEVRRTGLKDSVTGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLP 180
             AR VASEV+RTG+K++ +G+ K++YA YEP AK+LYSKYEPKAEQCAVSAW KLNQLP
Sbjct: 121 VAARAVASEVQRTGVKETASGLAKTLYAMYEPKAKELYSKYEPKAEQCAVSAWRKLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKNGIEMKPL 240
           +FP VAQ  +PTAAYC+EKYN+TV ++AEKGY+VSSYLPLVPT++IA+VF     E  P+
Sbjct: 181 LFPQVAQVFVPTAAYCSEKYNQTVVSTAEKGYRVSSYLPLVPTQKIAQVFRNEVPESAPI 240

Query: 241 VN 243
            +
Sbjct: 241 AS 240

The following BLAST results are available for this feature:
BLAST of ClCG03G017110 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y3550_ARATH1.4e-8265.33REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana GN=At3g05500 PE=1 SV=1[more]
SRP_VITRI1.1e-7460.87Stress-related protein OS=Vitis riparia GN=SRP PE=2 SV=1[more]
Y5513_ORYSI5.8e-6051.75REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica GN=OsI_017815 PE=... [more]
Y5513_ORYSJ5.8e-6051.75REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonic... [more]
SRP_PHAVU8.6e-5659.90Stress-related protein OS=Phaseolus vulgaris GN=SRP PE=2 SV=1[more]
BLAST of ClCG03G017110 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M1J0_CUCSA9.1e-12190.91Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569430 PE=4 SV=1[more]
A0A0B0Q0B4_GOSAR2.0e-9170.34Uncharacterized protein OS=Gossypium arboreum GN=F383_12676 PE=4 SV=1[more]
A0A0D2PGY1_GOSRA3.7e-9069.49Uncharacterized protein OS=Gossypium raimondii GN=B456_007G300000 PE=4 SV=1[more]
B9RFA8_RICCO4.1e-8968.60Rubber elongation factor protein, putative OS=Ricinus communis GN=RCOM_1433280 P... [more]
C9E7B4_MORAL5.4e-8966.94Rubber elongation factor OS=Morus alba PE=2 SV=1[more]
BLAST of ClCG03G017110 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G05500.17.9e-8465.33 Rubber elongation factor protein (REF)[more]
AT2G47780.11.0e-4644.44 Rubber elongation factor protein (REF)[more]
AT1G67360.21.0e-3036.49 Rubber elongation factor protein (REF)[more]
BLAST of ClCG03G017110 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659099505|ref|XP_008450634.1|4.8e-12392.56PREDICTED: REF/SRPP-like protein At3g05500 [Cucumis melo][more]
gi|449435657|ref|XP_004135611.1|1.3e-12090.91PREDICTED: REF/SRPP-like protein At3g05500 [Cucumis sativus][more]
gi|728850786|gb|KHG30229.1|2.8e-9170.34hypothetical protein F383_12676 [Gossypium arboreum][more]
gi|823197092|ref|XP_012434168.1|5.4e-9069.49PREDICTED: REF/SRPP-like protein At3g05500 [Gossypium raimondii][more]
gi|255542728|ref|XP_002512427.1|5.9e-8968.60PREDICTED: REF/SRPP-like protein At3g05500 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008802REF
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019915 lipid storage
biological_process GO:0006448 regulation of translational elongation
biological_process GO:1902584 positive regulation of response to water deprivation
biological_process GO:0045927 positive regulation of growth
biological_process GO:0034389 lipid particle organization
biological_process GO:0080186 developmental vegetative growth
biological_process GO:0051179 localization
biological_process GO:0006414 translational elongation
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0043229 intracellular organelle
cellular_component GO:0005773 vacuole
cellular_component GO:0005840 ribosome
cellular_component GO:0005811 lipid particle
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG03G017110.1ClCG03G017110.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008802Rubber elongation factorPFAMPF05755REFcoord: 17..231
score: 7.0
NoneNo IPR availablePANTHERPTHR33732FAMILY NOT NAMEDcoord: 1..240
score: 3.2E
NoneNo IPR availablePANTHERPTHR33732:SF3SUBFAMILY NOT NAMEDcoord: 1..240
score: 3.2E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG03G017110Csa1G569430Cucumber (Chinese Long) v2cuwcgB046
ClCG03G017110MELO3C015310Melon (DHL92) v3.5.1mewcgB245
ClCG03G017110Cla005222Watermelon (97103) v1wcgwmB224
ClCG03G017110Cla97C03G067450Watermelon (97103) v2wcgwmbB186
ClCG03G017110Bhi02G001756Wax gourdwcgwgoB363
ClCG03G017110CSPI01G26490Wild cucumber (PI 183967)cpiwcgB049
ClCG03G017110Cucsa.181940Cucumber (Gy14) v1cgywcgB324
ClCG03G017110CmaCh10G011190Cucurbita maxima (Rimu)cmawcgB055
ClCG03G017110CmaCh11G011370Cucurbita maxima (Rimu)cmawcgB107
ClCG03G017110CmoCh11G011790Cucurbita moschata (Rifu)cmowcgB097
ClCG03G017110CmoCh10G011980Cucurbita moschata (Rifu)cmowcgB046
ClCG03G017110Lsi06G001150Bottle gourd (USVL1VR-Ls)lsiwcgB364
ClCG03G017110Cp4.1LG18g00510Cucurbita pepo (Zucchini)cpewcgB328
ClCG03G017110Cp4.1LG04g00510Cucurbita pepo (Zucchini)cpewcgB600
ClCG03G017110CsGy1G025730Cucumber (Gy14) v2cgybwcgB043
ClCG03G017110MELO3C015310.2Melon (DHL92) v3.6.1medwcgB237
ClCG03G017110Carg25029Silver-seed gourdcarwcgB0239
ClCG03G017110CsaV3_1G038850Cucumber (Chinese Long) v3cucwcgB050
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG03G017110Bottle gourd (USVL1VR-Ls)lsiwcgB105
ClCG03G017110Bottle gourd (USVL1VR-Ls)lsiwcgB362
ClCG03G017110Melon (DHL92) v3.6.1medwcgB231
ClCG03G017110Cucumber (Chinese Long) v3cucwcgB042
ClCG03G017110Watermelon (97103) v2wcgwmbB189
ClCG03G017110Wax gourdwcgwgoB364
ClCG03G017110Watermelon (Charleston Gray)wcgwcgB125
ClCG03G017110Cucumber (Gy14) v1cgywcgB036
ClCG03G017110Cucurbita maxima (Rimu)cmawcgB159
ClCG03G017110Cucurbita moschata (Rifu)cmowcgB148
ClCG03G017110Melon (DHL92) v3.5.1mewcgB381
ClCG03G017110Cucumber (Chinese Long) v2cuwcgB135
ClCG03G017110Watermelon (97103) v1wcgwmB242