CsGy1G017240 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G017240
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionRING-H2 zinc finger protein
LocationChr1 : 15087369 .. 15090485 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTTTAAAATAAAAAAATAAAAAAAATAAAAAAGAGAAAAAAGAAAGAAAAAGAAAGAACAAAAGTAATTGGGATTTCGATTTAGGAAGGGCATCGGTCAAAAAGGAAAAGGGAATAATATGAAAGGAAGAGGAAGAGGGTTAGAAGAAGTCGAATAAATCATACATACAACAAATCAATTGTTCATCTCTTCTTTACTCATTTTCTTGAACCGTAAATCCCCAGCAATTACAATTATATCAAATCCACCTTTCTGTTTCTGCTCCCAAAAGGCCCCAAACAAAACAAAGAAACCATTCTTTCAATCCATTTCAAAGCATCATCGCCTAAATTTAACCTCCAAATTATATCAATCATCACTCTCTTCGCTTCATTTACAATCTTAATTACTATGGGGAAGCGCAAGCGAGGCTCTGATCAGACCCACCACGATCCTCCTCTTCATCTCTCCGGTATATGCTCTTTCTTTCTCCGATCATATAATCATGCCCGCTTTCTATTTGATAAAATGTCTCAAAGGGACGATTCATTTGTATACGTACACGGTTTTTCTTGTGTGGGGTGTCTCTCGATACGGCGAATCTTATTTTTCTTGAGCTTTGAGAATCAATGGGGTGTATGGGTTTTCTAAGTAATTGGCATTTTTGGATTTCTTTTGAAGAATGAAAATTTTGGATGGCTGGGGGAAATAAAGAATGAAGGGTAGTTTTTCTTTCCCTTTTTAAGTAATATTGGGGTTGGTTTGGGCCTCTTTAAGGATGCATTCTGATTTAGAGATGTAGTTTGATGACTAATCTAAGTCATTTGGCTACTTCATTACCTTTTGGTATGAGCTTTGGCTGGATGCATTTGGGTTGTGTTTCATTTGATTATATCAAGATCAAGATGTGTTGTTCTAGATATCAAGGTGGGGTTGAGTTAATTTTACGCTTTACAACTGATAATTAAGTGAACTCTATGTATGTTTTGTAGTTGGGGTTTCACAAGGTGGGGTTGATGGAATTCCAATTATCCTTTATTTTGAATAATGAAATGTAACATGATTTGTATGTATGTTGTAGGTATGGTTCCTTTTTCTAATCAGACGGATGTGCGGTCGGAAGAGGTCTGTACTCTTTTGTTTGCTTAAGTGAGTAGACAAAAGAATATTTTAATGTTTTCCCTTAGTAGAGAGCATTGAAGTCAGTTTTTTTTTTTTCTTTCTTTTTCCTGCTAGTGGACCACATTCTATTAAACTTACACTGCATTGAATCAACAGGATACGAGTCTTGCCCGTCCAATATTCATGAAACGTTCACGTCATCACCATAGCCATCAATATTGTTGGCGAGGTTCAACCAGTCAAGCAAATGCATCTGCGTCCCGTGAAAACCGAGTCAGAACTGTCCTTGAGGAACGACCCGCTTTTAAATTTGCTGCTCATTACAACTCAGAGTTTCCAGACCGTATAGGTACCCTTTTTGAATGAGAGTACTTCTCACGATGGCATGCTAAGTACTTGTTCTTTAAATGTTATAAAGATATTTGAAAATTCATACCCTATATATTATTATGTGCCTCTCTCTAATCAGATGAGAAGACCTGAAAACCTAAATAATGCTAGACATAGGTGTTATGTAAATGTACACCACATCTCAAGTTAATTAAATTTCAACGTTTCTTCTAGTTGGATGATCAGACACCTTGCTTTCAAATATGTTTTGACTGTGTTTGGAGTGACTTGTGACTTATAAAAAATGTGCTTTTAAGCATTTAGAAAATCATTCCACATGGGCAATTCACATTCTTTTTTATGTAAATATATTAGATATCAGTTGCCTGTTTTTTTCTCTCATTTATTTGTAGTTTTGGTGATTTTGGTTCTTGAATTTTGAATAAAGAACAGTCAATTGTTTGGCACGAAACACTTATTTTATGAAGGAAGACGTCCTAAATAAACACATCTTAGGTATTAGAGACCTGAGCCAAATTAAATCCTAATGATCATCTACAAAATGATTAATGAAGATGAAGTATATAACAATATATTAGCCTGTCATCCCACACCATTTGAAGCTCTCGCTCCAGTGGGTGAAGATAGTTGCTTCTTCTACATTGATAATGTTGTTCTTCTGTATTAACTAAATTTTTGCTTCAATTTTAGAGAGCATTGAGAGCACCTTTAGGGAGCCAGAAAGGATAAGGTACAATTCCTTGGGGAAGGATGCTTTTTCATCTCATGTAATGAGAATGATATGTGGTATTTGCCAGAAGCTGATGAGACGAAAGCTTTGCTTTCTAGGGAACACACTTTCTTCTAGTGAACTTCCCGTTGCTGCGGTTTTAGTTTGTGGCCATGTCTATCATGCAGAATGTCTGGAGAACAGGTCAAGTGTGGAAGATAGAAGCGACCCACCTTGTCCATTGTGCACAAAACCGCCTCCTGAAGTCGATGATTCAAAAAGAGGAGAACAAGAATGAGTGGAGTTGTACATATGTTATCACATAGCACCAACATAGGAAATAGAGAACTTGGTTCTGACTTGAATGGGCATATCAAAAAGTGGAGTTTTTGCATCCTCGATTGATTTTCCAAACTAATCAATCACTGTTTTCTCTGGATGGCTGTGATTTAGAAACAGAAAATAGTAACTTTGAATCACAACCATTCAGAAAATAGCGATAATGGGTCGAAAGGTAACAAGGATTTGCCCTCCTTAGATTTCTTTTTGTGTAGAGCTAGATTGACATATGGAAGTCCTTTGGTACCTTATGGAAACATTGTTATCTTGCATAGCAGCAGAGGATTTTAGTCGAGACATCTTCATGGTATTTTGTACTTTTTATATCAATGTCTAAAATAGTATATTTTAGAAAGTATCGATGTTAGCAAAGTTATAATGGAAGTAGATTTTTGTGTTTTCCTTGTAGAAAAAATGATGGTAATGAGTAATCTATTTCAAAGGTTGTGTTTGTTTGATTTGGCACTGACATAAAAGTCTGTAGGTGAAGCAGTGATTGAAAATTAGGAGAGATTCAAGAAATGTATAATCAACACGAGCTTCATAAGTTTACCATGGATATACTTTTGTTTTTTTTAGTATTTGTATTCCGTTGGAGTTAATTTTAATTTTAA

mRNA sequence

TTTTTTTAAAATAAAAAAATAAAAAAAATAAAAAAGAGAAAAAAGAAAGAAAAAGAAAGAACAAAAGTAATTGGGATTTCGATTTAGGAAGGGCATCGGTCAAAAAGGAAAAGGGAATAATATGAAAGGAAGAGGAAGAGGGTTAGAAGAAGTCGAATAAATCATACATACAACAAATCAATTGTTCATCTCTTCTTTACTCATTTTCTTGAACCGTAAATCCCCAGCAATTACAATTATATCAAATCCACCTTTCTGTTTCTGCTCCCAAAAGGCCCCAAACAAAACAAAGAAACCATTCTTTCAATCCATTTCAAAGCATCATCGCCTAAATTTAACCTCCAAATTATATCAATCATCACTCTCTTCGCTTCATTTACAATCTTAATTACTATGGGGAAGCGCAAGCGAGGCTCTGATCAGACCCACCACGATCCTCCTCTTCATCTCTCCGGTATGGTTCCTTTTTCTAATCAGACGGATGTGCGGTCGGAAGAGGATACGAGTCTTGCCCGTCCAATATTCATGAAACGTTCACGTCATCACCATAGCCATCAATATTGTTGGCGAGGTTCAACCAGTCAAGCAAATGCATCTGCGTCCCGTGAAAACCGAGTCAGAACTGTCCTTGAGGAACGACCCGCTTTTAAATTTGCTGCTCATTACAACTCAGAGTTTCCAGACCGTATAGAGAGCATTGAGAGCACCTTTAGGGAGCCAGAAAGGATAAGGTACAATTCCTTGGGGAAGGATGCTTTTTCATCTCATGTAATGAGAATGATATGTGGTATTTGCCAGAAGCTGATGAGACGAAAGCTTTGCTTTCTAGGGAACACACTTTCTTCTAGTGAACTTCCCGTTGCTGCGGTTTTAGTTTGTGGCCATGTCTATCATGCAGAATGTCTGGAGAACAGGTCAAGTGTGGAAGATAGAAGCGACCCACCTTGTCCATTGTGCACAAAACCGCCTCCTGAAGTCGATGATTCAAAAAGAGGAGAACAAGAATGAGTGGAGTTGTACATATGTTATCACATAGCACCAACATAGGAAATAGAGAACTTGGTTCTGACTTGAATGGGCATATCAAAAAGTGGAGTTTTTGCATCCTCGATTGATTTTCCAAACTAATCAATCACTGTTTTCTCTGGATGGCTGTGATTTAGAAACAGAAAATAGTAACTTTGAATCACAACCATTCAGAAAATAGCGATAATGGGTCGAAAGGTAACAAGGATTTGCCCTCCTTAGATTTCTTTTTGTGTAGAGCTAGATTGACATATGGAAGTCCTTTGGTACCTTATGGAAACATTGTTATCTTGCATAGCAGCAGAGGATTTTAGTCGAGACATCTTCATGGTATTTTGTACTTTTTATATCAATGTCTAAAATAGTATATTTTAGAAAGTATCGATGTTAGCAAAGTTATAATGGAAGTAGATTTTTGTGTTTTCCTTGTAGAAAAAATGATGGTAATGAGTAATCTATTTCAAAGGTTGTGTTTGTTTGATTTGGCACTGACATAAAAGTCTGTAGGTGAAGCAGTGATTGAAAATTAGGAGAGATTCAAGAAATGTATAATCAACACGAGCTTCATAAGTTTACCATGGATATACTTTTGTTTTTTTTAGTATTTGTATTCCGTTGGAGTTAATTTTAATTTTAA

Coding sequence (CDS)

ATGGGGAAGCGCAAGCGAGGCTCTGATCAGACCCACCACGATCCTCCTCTTCATCTCTCCGGTATGGTTCCTTTTTCTAATCAGACGGATGTGCGGTCGGAAGAGGATACGAGTCTTGCCCGTCCAATATTCATGAAACGTTCACGTCATCACCATAGCCATCAATATTGTTGGCGAGGTTCAACCAGTCAAGCAAATGCATCTGCGTCCCGTGAAAACCGAGTCAGAACTGTCCTTGAGGAACGACCCGCTTTTAAATTTGCTGCTCATTACAACTCAGAGTTTCCAGACCGTATAGAGAGCATTGAGAGCACCTTTAGGGAGCCAGAAAGGATAAGGTACAATTCCTTGGGGAAGGATGCTTTTTCATCTCATGTAATGAGAATGATATGTGGTATTTGCCAGAAGCTGATGAGACGAAAGCTTTGCTTTCTAGGGAACACACTTTCTTCTAGTGAACTTCCCGTTGCTGCGGTTTTAGTTTGTGGCCATGTCTATCATGCAGAATGTCTGGAGAACAGGTCAAGTGTGGAAGATAGAAGCGACCCACCTTGTCCATTGTGCACAAAACCGCCTCCTGAAGTCGATGATTCAAAAAGAGGAGAACAAGAATGA

Protein sequence

MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIESIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKRGEQE
Homology
[Close]
BLAST of CsGy1G017240 vs. NCBI nr
Match: XP_004150507.1 (PREDICTED: uncharacterized protein LOC101222911 [Cucumis sativus] >KGN65100.1 hypothetical protein Csa_1G217850 [Cucumis sativus])

HSP 1 Score: 421.8 bits (1083), Expect = 1.3e-114
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0 

Query: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRG 60
           MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRG
Sbjct: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRG 60

Query: 61  STSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIESIESTFREPERIRYNSLGKD 120
           STSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIESIESTFREPERIRYNSLGKD
Sbjct: 61  STSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIESIESTFREPERIRYNSLGKD 120

Query: 121 AFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180
           AFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR
Sbjct: 121 AFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180

Query: 181 SDPPCPLCTKPPPEVDDSKRGEQE 205
           SDPPCPLCTKPPPEVDDSKRGEQE
Sbjct: 181 SDPPCPLCTKPPPEVDDSKRGEQE 204

[Close]
BLAST of CsGy1G017240 vs. NCBI nr
Match: XP_008443927.1 (PREDICTED: uncharacterized protein LOC103487402 isoform X2 [Cucumis melo])

HSP 1 Score: 396.0 bits (1016), Expect = 7.9e-107
Identity = 194/204 (95.10%), Postives = 197/204 (96.57%), Query Frame = 0 

Query: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRG 60
           MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHH+SHQYC RG
Sbjct: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHYSHQYCRRG 60

Query: 61  STSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIESIESTFREPERIRYNSLGKD 120
           STSQANAS SRENRVRTVLEERPAFKFAAH NSEFPDRIESIESTFR PERIRYNSLGKD
Sbjct: 61  STSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPDRIESIESTFRGPERIRYNSLGKD 120

Query: 121 AFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180
           A SSH+MRM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR
Sbjct: 121 AISSHLMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180

Query: 181 SDPPCPLCTKPPPEVDDSKRGEQE 205
           SDPPCPLCTK PPEVDDSK GEQE
Sbjct: 181 SDPPCPLCTKLPPEVDDSKGGEQE 204

[Close]
BLAST of CsGy1G017240 vs. NCBI nr
Match: XP_016899782.1 (PREDICTED: uncharacterized protein LOC103487402 isoform X1 [Cucumis melo])

HSP 1 Score: 352.8 bits (904), Expect = 7.7e-94
Identity = 174/184 (94.57%), Postives = 177/184 (96.20%), Query Frame = 0 

Query: 21  GMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLE 80
           GMVPFSNQTDVRSEEDTSLARPIFMKRSRHH+SHQYC RGSTSQANAS SRENRVRTVLE
Sbjct: 22  GMVPFSNQTDVRSEEDTSLARPIFMKRSRHHYSHQYCRRGSTSQANASTSRENRVRTVLE 81

Query: 81  ERPAFKFAAHYNSEFPDRIESIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRR 140
           ERPAFKFAAH NSEFPDRIESIESTFR PERIRYNSLGKDA SSH+MRM+CGICQKLMRR
Sbjct: 82  ERPAFKFAAHCNSEFPDRIESIESTFRGPERIRYNSLGKDAISSHLMRMVCGICQKLMRR 141

Query: 141 KLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKR 200
           KLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTK PPEVDDSK 
Sbjct: 142 KLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKLPPEVDDSKG 201

Query: 201 GEQE 205
           GEQE
Sbjct: 202 GEQE 205

[Close]
BLAST of CsGy1G017240 vs. NCBI nr
Match: XP_022134599.1 (uncharacterized protein LOC111006826 [Momordica charantia])

HSP 1 Score: 340.5 bits (872), Expect = 3.9e-90
Identity = 169/203 (83.25%), Postives = 182/203 (89.66%), Query Frame = 0 

Query: 1   MGKRKR-GSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWR 60
           MGKRKR  SD TH DPPLHLSG+VPFSNQ DV SEED SLARP+FMKRSRH +SHQYC R
Sbjct: 1   MGKRKRASSDHTHPDPPLHLSGVVPFSNQMDVLSEEDQSLARPVFMKRSRHQYSHQYCRR 60

Query: 61  GSTSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIESIESTFREPERIRYNSLGK 120
           GSTSQANAS SRENRVRTVLEERPAFKFAAH NSEFP+ IESIE+TF  PERIRY+SLGK
Sbjct: 61  GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPNHIESIENTFWGPERIRYSSLGK 120

Query: 121 DAFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVED 180
           DA SSH +RM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHA+CLE RS VED
Sbjct: 121 DAISSHGVRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLEIRSKVED 180

Query: 181 RSDPPCPLCTKPPPEVDDSKRGE 203
           RSDPPCPLCT+P  ++DDSK G+
Sbjct: 181 RSDPPCPLCTEPSTKIDDSKGGQ 203

[Close]
BLAST of CsGy1G017240 vs. NCBI nr
Match: XP_022961020.1 (uncharacterized protein LOC111461650 isoform X2 [Cucurbita moschata])

HSP 1 Score: 338.2 bits (866), Expect = 2.0e-89
Identity = 165/202 (81.68%), Postives = 178/202 (88.12%), Query Frame = 0 

Query: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRG 60
           MGKRK GSDQTHHD P HLSG+VPFSNQ DVRSEED SLARPIFMKRSRH +SHQYC RG
Sbjct: 7   MGKRKPGSDQTHHDRPHHLSGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRG 66

Query: 61  STSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIESIESTFREPERIRYNSLGKD 120
           STS+ANAS SRENRVRT+LE+RPAFKFAAH NSEFPD IES ESTF  PERIRYNSLGKD
Sbjct: 67  STSEANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKD 126

Query: 121 AFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180
             SSH  +++CGICQKLMRRKLCFLGNTLSSSELP+AAVLVCGHVYHA+CLEN S+VEDR
Sbjct: 127 TISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDR 186

Query: 181 SDPPCPLCTKPPPEVDDSKRGE 203
           SDP CPLC +PP +VDDS   E
Sbjct: 187 SDPGCPLCMEPPAKVDDSTEQE 208

[Close]
BLAST of CsGy1G017240 vs. TAIR10
Match: AT1G75400.1 (RING/U-box superfamily protein)

HSP 1 Score: 73.2 bits (178), Expect = 2.1e-13
Identity = 34/75 (45.33%), Postives = 49/75 (65.33%), Query Frame = 0 

Query: 118 GKDAFS---SHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENR 177
           G   FS   S V + +CG C KL+  +     +++++ ELP+AAVL CGHVYHAECLE  
Sbjct: 265 GSSRFSFSPSVVDQQVCGACSKLLTER-----SSIATFELPIAAVLACGHVYHAECLETM 324

Query: 178 SSVEDRSDPPCPLCT 190
           ++  ++ DP CP+CT
Sbjct: 325 TTDIEKYDPACPICT 334

[Close]
BLAST of CsGy1G017240 vs. TAIR10
Match: AT1G19680.1 (RING/U-box superfamily protein)

HSP 1 Score: 64.3 bits (155), Expect = 9.9e-11
Identity = 28/68 (41.18%), Postives = 42/68 (61.76%), Query Frame = 0 

Query: 123 SSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSD 182
           S  V +  CG C KL+  +     + ++  +LP+ AVL CGHVYHA CLE  ++  ++ D
Sbjct: 265 SPSVDQQTCGRCSKLLTER-----SPVARFDLPIPAVLACGHVYHAACLETMTNETEKYD 324

Query: 183 PPCPLCTK 191
           P CP+CT+
Sbjct: 325 PTCPICTE 327

[Close]
BLAST of CsGy1G017240 vs. TAIR10
Match: AT2G21500.2 (RING/U-box superfamily protein)

HSP 1 Score: 63.9 bits (154), Expect = 1.3e-10
Identity = 28/60 (46.67%), Postives = 38/60 (63.33%), Query Frame = 0 

Query: 131 CGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCT 190
           CG C + L  + L       +++EL VAA+L CGHVYH+ECLE  +   D+ DP CP+CT
Sbjct: 251 CGACSRSLSEKSLLSSQKIFATNELSVAAILACGHVYHSECLEQMTPEIDKFDPSCPICT 310

[Close]
BLAST of CsGy1G017240 vs. TAIR10
Match: AT4G39140.1 (RING/U-box superfamily protein)

HSP 1 Score: 62.8 bits (151), Expect = 2.9e-10
Identity = 32/80 (40.00%), Postives = 42/80 (52.50%), Query Frame = 0 

Query: 117 LGKDAFSSHVMRM------ICGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAE 176
           L +D    H  RM       CG C + L  + L        ++EL V+A+L CGHVYH E
Sbjct: 240 LQRDKIDHHGNRMSKHQQHTCGACSRPLSEKSLWSSQKIFMTNELSVSAILACGHVYHGE 299

Query: 177 CLENRSSVEDRSDPPCPLCT 190
           CLE  +   D+ DP CP+CT
Sbjct: 300 CLEQMTPEIDKFDPSCPICT 319

[Close]
BLAST of CsGy1G017240 vs. TAIR10
Match: AT1G14180.1 (RING/U-box superfamily protein)

HSP 1 Score: 56.6 bits (135), Expect = 2.1e-08
Identity = 33/108 (30.56%), Postives = 55/108 (50.93%), Query Frame = 0 

Query: 88  AAHYNSEFPDRIESIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRRKLCFLGN 147
           A  ++S  P  I+S++    EP     N+  K    +      CG+C + + +K  +   
Sbjct: 144 ACSWSSGTPSSIDSVD--VPEPVLDWNNNSTKAQQVAASSTFKCGLCNRYLSQKSPWGSR 203

Query: 148 TL-SSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPE 195
           ++  + ++PV  VL C HV+H ECL+  +    R+DP CP+CTK   E
Sbjct: 204 SIVRNRDMPVTGVLSCQHVFHVECLDQSTPKIQRNDPLCPICTKQEGE 249

[Close]
BLAST of CsGy1G017240 vs. TrEMBL
Match: tr|A0A0A0LT71|A0A0A0LT71_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G217850 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 8.9e-115
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0 

Query: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRG 60
           MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRG
Sbjct: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRG 60

Query: 61  STSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIESIESTFREPERIRYNSLGKD 120
           STSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIESIESTFREPERIRYNSLGKD
Sbjct: 61  STSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIESIESTFREPERIRYNSLGKD 120

Query: 121 AFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180
           AFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR
Sbjct: 121 AFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180

Query: 181 SDPPCPLCTKPPPEVDDSKRGEQE 205
           SDPPCPLCTKPPPEVDDSKRGEQE
Sbjct: 181 SDPPCPLCTKPPPEVDDSKRGEQE 204

[Close]
BLAST of CsGy1G017240 vs. TrEMBL
Match: tr|A0A1S3B956|A0A1S3B956_CUCME (uncharacterized protein LOC103487402 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487402 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 5.2e-107
Identity = 194/204 (95.10%), Postives = 197/204 (96.57%), Query Frame = 0 

Query: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRG 60
           MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHH+SHQYC RG
Sbjct: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHYSHQYCRRG 60

Query: 61  STSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIESIESTFREPERIRYNSLGKD 120
           STSQANAS SRENRVRTVLEERPAFKFAAH NSEFPDRIESIESTFR PERIRYNSLGKD
Sbjct: 61  STSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPDRIESIESTFRGPERIRYNSLGKD 120

Query: 121 AFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180
           A SSH+MRM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR
Sbjct: 121 AISSHLMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180

Query: 181 SDPPCPLCTKPPPEVDDSKRGEQE 205
           SDPPCPLCTK PPEVDDSK GEQE
Sbjct: 181 SDPPCPLCTKLPPEVDDSKGGEQE 204

[Close]
BLAST of CsGy1G017240 vs. TrEMBL
Match: tr|A0A1S4DUW7|A0A1S4DUW7_CUCME (uncharacterized protein LOC103487402 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487402 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 5.1e-94
Identity = 174/184 (94.57%), Postives = 177/184 (96.20%), Query Frame = 0 

Query: 21  GMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLE 80
           GMVPFSNQTDVRSEEDTSLARPIFMKRSRHH+SHQYC RGSTSQANAS SRENRVRTVLE
Sbjct: 22  GMVPFSNQTDVRSEEDTSLARPIFMKRSRHHYSHQYCRRGSTSQANASTSRENRVRTVLE 81

Query: 81  ERPAFKFAAHYNSEFPDRIESIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRR 140
           ERPAFKFAAH NSEFPDRIESIESTFR PERIRYNSLGKDA SSH+MRM+CGICQKLMRR
Sbjct: 82  ERPAFKFAAHCNSEFPDRIESIESTFRGPERIRYNSLGKDAISSHLMRMVCGICQKLMRR 141

Query: 141 KLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKR 200
           KLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTK PPEVDDSK 
Sbjct: 142 KLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKLPPEVDDSKG 201

Query: 201 GEQE 205
           GEQE
Sbjct: 202 GEQE 205

[Close]
BLAST of CsGy1G017240 vs. TrEMBL
Match: tr|A0A2N9F746|A0A2N9F746_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14628 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.6e-39
Identity = 99/198 (50.00%), Postives = 119/198 (60.10%), Query Frame = 0 

Query: 7   GSDQTHHDPPLHL---SGMVPFSNQTDV-------------RSEEDTSLARPIFMKRSRH 66
           G +    + PLH    S + P S+  D+              +    SL R IF+KRSRH
Sbjct: 6   GMEFLAEEKPLHAVDSSALNPLSSVLDITDSSIRLLNAHPTAAHHHQSLGRSIFLKRSRH 65

Query: 67  HHSHQYCWRGSTSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIESIESTFREPE 126
           H+SHQY  R S +  NAS SR     T  +ER +FK A   NS+     E+ ES F  PE
Sbjct: 66  HYSHQYSRRNSANHPNASTSRGKGAST-RDERLSFKLATQCNSQTGHHSENRESVFCRPE 125

Query: 127 RIRYNSLGKDAFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAEC 186
           RIR +SL  DA SS V++M+CG CQK +RRK  FLG+TLSS EL V AVLVCGHVYHAEC
Sbjct: 126 RIRSSSLVMDAMSSDVVKMVCGTCQKPLRRKPYFLGSTLSSGELSVVAVLVCGHVYHAEC 185

Query: 187 LENRSSVEDRSDPPCPLC 189
           LE R+ VEDR DP CPLC
Sbjct: 186 LEQRTCVEDRRDPTCPLC 202

[Close]
BLAST of CsGy1G017240 vs. TrEMBL
Match: tr|A0A2P4LY27|A0A2P4LY27_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_15707 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.6e-39
Identity = 105/236 (44.49%), Postives = 133/236 (56.36%), Query Frame = 0 

Query: 1   MGKRKRGSDQTHHDPPLHL----SGMVPFSNQTDVRSEEDT------------------- 60
           MGKRKR  D  +  PP       SGM   S +T + + + +                   
Sbjct: 1   MGKRKRIPDHINTQPPSDTMPCSSGMELMSEETPLHAVDSSALNPLSSVLDLTDSSMKLL 60

Query: 61  ----------SLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLEERPAFKF 120
                     +L R IF+KRSRHH+SHQY  R S + AN S SR  +V ++ +ER +FK 
Sbjct: 61  NAHPTAAHHQNLGRSIFLKRSRHHYSHQYSRRNSANHANPSTSR-GKVASLRDERLSFKL 120

Query: 121 AAHYNSEFPDRIESIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRRKLCFLGN 180
           A   NS+     E  E+ F  PERIR +S+  DA SS V++M CG CQK +RRK  FLG+
Sbjct: 121 ATQCNSQIGHHSEFRENMFCRPERIRSSSMVMDAISSDVVKMECGTCQKQLRRKPYFLGS 180

Query: 181 TLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKRGEQ 204
           TLSS EL V AVLVCGHVYHAECLE R+ +ED+ DPPCPLC       DD  RG++
Sbjct: 181 TLSSGELSVVAVLVCGHVYHAECLEQRTCLEDKRDPPCPLCLNLFSN-DDESRGQK 234

The following BLAST results are available for this feature:
BLAST of CsGy1G017240 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004150507.11.3e-114100.00PREDICTED: uncharacterized protein LOC101222911 [Cucumis sativus] >KGN65100.1 hy... [more]
XP_008443927.17.9e-10795.10PREDICTED: uncharacterized protein LOC103487402 isoform X2 [Cucumis melo][more]
XP_016899782.17.7e-9494.57PREDICTED: uncharacterized protein LOC103487402 isoform X1 [Cucumis melo][more]
XP_022134599.13.9e-9083.25uncharacterized protein LOC111006826 [Momordica charantia][more]
XP_022961020.12.0e-8981.68uncharacterized protein LOC111461650 isoform X2 [Cucurbita moschata][more]
BLAST of CsGy1G017240 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G75400.12.1e-1345.33RING/U-box superfamily protein[more]
AT1G19680.19.9e-1141.18RING/U-box superfamily protein[more]
AT2G21500.21.3e-1046.67RING/U-box superfamily protein[more]
AT4G39140.12.9e-1040.00RING/U-box superfamily protein[more]
AT1G14180.12.1e-0830.56RING/U-box superfamily protein[more]
BLAST of CsGy1G017240 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy1G017240 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LT71|A0A0A0LT71_CUCSA8.9e-115100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G217850 PE=4 SV=1[more]
tr|A0A1S3B956|A0A1S3B956_CUCME5.2e-10795.10uncharacterized protein LOC103487402 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S4DUW7|A0A1S4DUW7_CUCME5.1e-9494.57uncharacterized protein LOC103487402 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A2N9F746|A0A2N9F746_FAGSY1.6e-3950.00Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14628 PE=4 SV=1[more]
tr|A0A2P4LY27|A0A2P4LY27_QUESU1.6e-3944.49Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_15707 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR027370Znf-RING_LisH
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G017240.1CsGy1G017240.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 131..188
e-value: 1.9E-4
score: 30.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 131..189
score: 10.291
IPR027370RING-type zinc-finger, LisH dimerisation motifPFAMPF13445zf-RING_UBOXcoord: 131..185
e-value: 1.1E-5
score: 25.2
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 118..202
e-value: 1.7E-7
score: 32.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..204
NoneNo IPR availablePANTHERPTHR31150FAMILY NOT NAMEDcoord: 27..199
NoneNo IPR availablePANTHERPTHR31150:SF6SUBFAMILY NOT NAMEDcoord: 27..199
NoneNo IPR availableCDDcd16448RING-H2coord: 131..188
e-value: 2.21527E-4
score: 36.2759
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 130..193

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G017240Cla012188Watermelon (97103) v1cgybwmB079
CsGy1G017240Csa1G217850Cucumber (Chinese Long) v2cgybcuB009
CsGy1G017240MELO3C010287Melon (DHL92) v3.5.1cgybmeB049
CsGy1G017240ClCG06G011730Watermelon (Charleston Gray)cgybwcgB063
CsGy1G017240CSPI01G16470Wild cucumber (PI 183967)cgybcpiB008
CsGy1G017240CmaCh10G005120Cucurbita maxima (Rimu)cgybcmaB014
CsGy1G017240CmaCh11G005120Cucurbita maxima (Rimu)cgybcmaB039
CsGy1G017240CmoCh11G005080Cucurbita moschata (Rifu)cgybcmoB037
CsGy1G017240CmoCh10G005480Cucurbita moschata (Rifu)cgybcmoB014
CsGy1G017240Lsi06G010200Bottle gourd (USVL1VR-Ls)cgyblsiB063
CsGy1G017240Cp4.1LG04g09080Cucurbita pepo (Zucchini)cgybcpeB109
CsGy1G017240Cp4.1LG18g05300Cucurbita pepo (Zucchini)cgybcpeB040
CsGy1G017240MELO3C010287.2Melon (DHL92) v3.6.1cgybmedB045
CsGy1G017240CsaV3_1G028040Cucumber (Chinese Long) v3cgybcucB001
CsGy1G017240Cla97C06G120890Watermelon (97103) v2cgybwmbB063
CsGy1G017240Bhi02G000761Wax gourdcgybwgoB093
CsGy1G017240Carg09951Silver-seed gourdcarcgybB0132
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G017240Cucumber (Chinese Long) v2cgybcuB003
CsGy1G017240Bottle gourd (USVL1VR-Ls)cgyblsiB051
CsGy1G017240Bottle gourd (USVL1VR-Ls)cgyblsiB070
CsGy1G017240Watermelon (Charleston Gray)cgybwcgB061
CsGy1G017240Watermelon (97103) v1cgybwmB039
CsGy1G017240Silver-seed gourdcarcgybB0628
CsGy1G017240Watermelon (97103) v2cgybwmbB060