CSPI01G16470 (gene) Wild cucumber (PI 183967)

NameCSPI01G16470
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionRING-H2 zinc finger protein
LocationChr1 : 12002056 .. 12004928 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGATTTAGGAAGGGCATCGGTCAAAAAGGAAAAGGGAATAATATGAAAGGAAGAGGAAGAGGGTTAGAAGAAGTCGAATAAATCATACATACAACAAATCAATTGTTCATCTCTTCTTTACTCATTTTCTTGAACCGTAAATCCCCAGCAATTACAATTATATCAAATCCACCTTTCTGTTTCTGCTCCCAAAAGGCCCCAAACAAAACAAAGAAACCATTCTTTCAATCCATTTCAAAGCATCATCGCCTAAATTTAACCTCCAAATTATATCAATCATCACTCTCTTCGCTTCATTTACAATCTTAATTACTATGGGGAAGCGCAAGCGAGGCTCTGATCAGACCCACCACGATCCTCCTCTTCATCTCTCCGGTATATGCTCTTTCTTTCTCCGATCATATAATCATGCCCGCTTTCTATTTGATAAAATGTCTCAAAGGGACGATTCATTTGTATACGTACACGGTTTTTCTTGTGTGGGGTGTCTCTCGATACGGCGAATCTTATTTTTCTTGAGCTTTGAGAATCAATGGGGTGTATGGGTTTTCTAAGTAATTGGCATTTTTGGATTTCTTTTGAAGAATGAAAATTTTGGATGGCTGGGGGAAATAAAGAATGAAGGGTAGTTTTTCTTTCCCTTTTTAAGTAATATTGGGGTTGGTTTGGGCCTCTTTAAGGATGCATTCTGATTTAGAGATGTAGTTTGATGACTAATCTAAGTCATTTGGCTACTTCATTACCTTTTGGTATGAGCTTTGGCTGGATGCATTTGGGTTGTGTTTCATTTGATTATATCAAGATCAAGATGTGTTGTTCTAGATATCAAGGTGGGGTTGAGTTAATTTTACGCTTTACAACTGATAATTAAGTGAACTCTATGTATGTTTTGTAGTTGGGGTTTCACAAGGTGGGGTTGATGGAATTCCAATTATCCTTTATTTTGAATAATGAAATGTAACATGATTTGTATGTATGTTGTAGGTATGGTTCCTTTTTCTAATCAGACGGATGTGCGGTCGGAAGAGGTCTGTACTCTTTTGTTTGCTTAAGTGAGTAGACAAAAGAATATTTTAATGTTTTCCCTTAGTAGAGAGCATTGAAGTCAGTTTTTTTTTTTTCTTTCTTTTTCCTGCTAGTGGACCACATTCTATTAAACTTACACTGCATTGAATCAACAGGATACGAGTCTTGCCCGTCCAATATTCATGAAACGTTCACGTCATCACCATAGCCATCAATATTGTTGGCGAGGTTCAACCAGTCAAGCAAATGCATCTGCGTCCCGTGAAAACCGAGTCAGAACTGTCCTTGAGGAACGACCCGCTTTTAAATTTGCTGCTCATTACAACTCAGAGTTTCCAGACCGTATAGGTACCCTTTTTGAATGAGAGTACTTCTCATGATGGCATGCTAAGTACTTGTTCTTTAAATGTTATAAAGATATTTGAAAATTCATACCCTATATATTATTATGTGCCTCTCTCTAATCAGATGAGAAGACCTGAAAACCTAAATAATGCTAGACATAGGTGTTATGTAAATGTACACCACATCTCAAGTTAATTAAATTTCAACGTTTCTTCTAGTTGGATGATCAGACACCTTGCTTTCAAATATGTTTTGACTGTGTTTGGAGTGACTTGTGACTTATAAAAAATGTGCTTTTAAGCATTTAGAAAATCATTCCACATGGGCAATTCACATTCTTTTTTATGTAAATATATTAGATATCAGTTGCCTGTTTTTTTCTCTCATTTATTTGTAGTTTTGGTGATTTTGGTTCTTGAATTTTGAATAAAGAACAGTCAATTGTTTGGCACGAAACACTTATTTTATGAAGGAAGACGTCCTAAATAAACACATCTTAGGTATTAGAGACCTGAGCCAAATTAAATCCTAATGATCATCTACAAAATGATTAATGAAGATGAAGTATATAACAATATATTAGCCTGTCATCCCACACCATTTGAAGCTCTCGCTCCAGTGGGTGAAGATAGTTGCTTCTTCTACATTGATAATGTTGTTCTTCTGTATTAACTAAATTTTTGCTTCAATTTTAGAGAGCATTGAGAGCACCTTTAGGGAGCCAGAAAGGATAAGGTACAATTCCTTGGGGAAGGATGCTTTTTCATCTCATGTAATGAGAATGATATGTGGTATTTGCCAGAAGCTGATGAGACGAAAGCTTTGCTTTCTAGGGAACACACTTTCTTCTAGTGAACTTCCCGTTGCTGCGGTTTTAGTTTGTGGCCATGTCTATCATGCAGAATGTCTGGAGAACAGGTCAAGTGTGGAAGATAGAAGCGACCCACCTTGTCCATTGTGCACAAAACCGCCTCCTGAAGTCGATGATTCAAAAAGAGGAGAACAAGAATGAGTGGAGTTGTACATATGTTATCACATAGCACCAACATAGGAAATAGAGAACTTGGTTCTGACTTGAATGGGCATATCAAAAAGTGGAGTTTTTGCATCCTCGATTGATTTTCCAAACTAATCAATCACTGTTTTCTCTGGATGGCTGTGATTTAGAAACAGAAAATAGTAACTTTGAATCACAACCATTCAGAAAATAGCGATAATGGGTTGAAAGGTAACAAGGATTTGCCCTCCTTAGATTTCTTTTTGTGTAGAGCTAGATTGACATATGGAAGTCCTTTGGTACCTTATGGAAACATTGTTATCTTGCATAGCAGCAGAGGATTTTAGTCGAGACATCTTCATGGTATTTTGTACTTTTTATATCAATGTCTAAAATAGTATATTTTAGAAAGTATCGATGTTAGCAAAGTTATAATGGAAGTAGATTTTTGTGTTTTCCTTGTAGAAAAAATGATGGTAATGAGTAATCTATTTCAAAGGTTGTG

mRNA sequence

ATGGGGAAGCGCAAGCGAGGCTCTGATCAGACCCACCACGATCCTCCTCTTCATCTCTCCGGTATGGTTCCTTTTTCTAATCAGACGGATGTGCGGTCGGAAGAGGATACGAGTCTTGCCCGTCCAATATTCATGAAACGTTCACGTCATCACCATAGCCATCAATATTGTTGGCGAGGTTCAACCAGTCAAGCAAATGCATCTGCGTCCCGTGAAAACCGAGTCAGAACTGTCCTTGAGGAACGACCCGCTTTTAAATTTGCTGCTCATTACAACTCAGAGTTTCCAGACCGTATAGAGAGCATTGAGAGCACCTTTAGGGAGCCAGAAAGGATAAGGTACAATTCCTTGGGGAAGGATGCTTTTTCATCTCATGTAATGAGAATGATATGTGGTATTTGCCAGAAGCTGATGAGACGAAAGCTTTGCTTTCTAGGGAACACACTTTCTTCTAGTGAACTTCCCGTTGCTGCGGTTTTAGTTTGTGGCCATGTCTATCATGCAGAATGTCTGGAGAACAGGTCAAGTGTGGAAGATAGAAGCGACCCACCTTGTCCATTGTGCACAAAACCGCCTCCTGAAGTCGATGATTCAAAAAGAGGAGAACAAGAATGA

Coding sequence (CDS)

ATGGGGAAGCGCAAGCGAGGCTCTGATCAGACCCACCACGATCCTCCTCTTCATCTCTCCGGTATGGTTCCTTTTTCTAATCAGACGGATGTGCGGTCGGAAGAGGATACGAGTCTTGCCCGTCCAATATTCATGAAACGTTCACGTCATCACCATAGCCATCAATATTGTTGGCGAGGTTCAACCAGTCAAGCAAATGCATCTGCGTCCCGTGAAAACCGAGTCAGAACTGTCCTTGAGGAACGACCCGCTTTTAAATTTGCTGCTCATTACAACTCAGAGTTTCCAGACCGTATAGAGAGCATTGAGAGCACCTTTAGGGAGCCAGAAAGGATAAGGTACAATTCCTTGGGGAAGGATGCTTTTTCATCTCATGTAATGAGAATGATATGTGGTATTTGCCAGAAGCTGATGAGACGAAAGCTTTGCTTTCTAGGGAACACACTTTCTTCTAGTGAACTTCCCGTTGCTGCGGTTTTAGTTTGTGGCCATGTCTATCATGCAGAATGTCTGGAGAACAGGTCAAGTGTGGAAGATAGAAGCGACCCACCTTGTCCATTGTGCACAAAACCGCCTCCTGAAGTCGATGATTCAAAAAGAGGAGAACAAGAATGA
BLAST of CSPI01G16470 vs. TrEMBL
Match: A0A0A0LT71_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G217850 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 2.8e-115
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 1

Query: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRG 60
           MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRG
Sbjct: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRG 60

Query: 61  STSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIESIESTFREPERIRYNSLGKD 120
           STSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIESIESTFREPERIRYNSLGKD
Sbjct: 61  STSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIESIESTFREPERIRYNSLGKD 120

Query: 121 AFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180
           AFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR
Sbjct: 121 AFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180

Query: 181 SDPPCPLCTKPPPEVDDSKRGEQE 205
           SDPPCPLCTKPPPEVDDSKRGEQE
Sbjct: 181 SDPPCPLCTKPPPEVDDSKRGEQE 204

BLAST of CSPI01G16470 vs. TrEMBL
Match: A9P889_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0025s00570g PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.4e-37
Identity = 84/182 (46.15%), Postives = 115/182 (63.19%), Query Frame = 1

Query: 21  GMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLE 80
           G +   N     + ++ +L R I +KRSRHH+ HQY  R S S A+AS SR  +     +
Sbjct: 57  GSLKLLNVHHSHAHQNYNLGRSIVLKRSRHHYGHQYSRRNSGSHADASTSR-GKTALSCD 116

Query: 81  ERPAFKFAAHYNSEFPDRIESIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRR 140
           ER  FK ++H  SE     E+ E  F  P+R+R+NSL  DA SS  ++++CGICQKL+RR
Sbjct: 117 ERLTFKLSSHLGSEPGCHTENKELEFSRPDRVRFNSLVMDAVSSDALKIVCGICQKLVRR 176

Query: 141 KLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKR 200
           K  F+GN L++ E  V A+LVCGHVYH+ECLE ++S+ED  DPPCPLC+    E D  + 
Sbjct: 177 KPYFIGNALTAGEFSVVAILVCGHVYHSECLEQKTSLEDMRDPPCPLCSGLLSEEDAPRE 236

Query: 201 GE 203
            E
Sbjct: 237 QE 237

BLAST of CSPI01G16470 vs. TrEMBL
Match: A5AFH6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009874 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 7.6e-36
Identity = 89/179 (49.72%), Postives = 112/179 (62.57%), Query Frame = 1

Query: 26  SNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLEERPAF 85
           SN     S    +L+R + ++RSRHH+ HQY  R S + A+AS S   ++    +E+ +F
Sbjct: 58  SNPHHPLSHHHYNLSRTLLLRRSRHHYGHQYSRRNSANHADASTSH-GKITPSCDEKLSF 117

Query: 86  KFAAHYNSEFPDRIESIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRRKLCFL 145
           K A H  S+F     S E  F  PERIR +S   DA S  ++RM+CGICQ+ +RRK   L
Sbjct: 118 KLANHSKSDFGQHTGSREKAFFRPERIRSSSSVVDAVSLDMVRMVCGICQRPLRRKPYCL 177

Query: 146 GNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKRGEQE 205
            N LSSSEL V AVLVCGHVYHA+CLE R+  EDR DPPCPLC     +VDDS  G QE
Sbjct: 178 ENVLSSSELSVVAVLVCGHVYHADCLEQRTCHEDRQDPPCPLCVGLLSKVDDS--GGQE 233

BLAST of CSPI01G16470 vs. TrEMBL
Match: D7T4X1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0118g00330 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 7.6e-36
Identity = 89/179 (49.72%), Postives = 112/179 (62.57%), Query Frame = 1

Query: 26  SNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLEERPAF 85
           SN     S    +L+R + ++RSRHH+ HQY  R S + A+AS S   ++    +E+ +F
Sbjct: 71  SNPHHPLSHHHYNLSRTLLLRRSRHHYGHQYSRRNSANHADASTSH-GKITPSCDEKLSF 130

Query: 86  KFAAHYNSEFPDRIESIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRRKLCFL 145
           K A H  S+F     S E  F  PERIR +S   DA S  ++RM+CGICQ+ +RRK   L
Sbjct: 131 KLANHSKSDFGQHTGSREKAFFRPERIRSSSSVVDAVSLDMVRMVCGICQRPLRRKPYCL 190

Query: 146 GNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKRGEQE 205
            N LSSSEL V AVLVCGHVYHA+CLE R+  EDR DPPCPLC     +VDDS  G QE
Sbjct: 191 ENVLSSSELSVVAVLVCGHVYHADCLEQRTCHEDRQDPPCPLCVGLLSKVDDS--GGQE 246

BLAST of CSPI01G16470 vs. TrEMBL
Match: V4UUQ1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009344mg PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 7.6e-36
Identity = 102/240 (42.50%), Postives = 132/240 (55.00%), Query Frame = 1

Query: 1   MGKRKRGSDQTHH--DPPLHLSGMVPFSNQTDVRSEEDTS-------------------- 60
           MGKRKRG+DQ H+  DPP   S  +P S+ T+  S++  S                    
Sbjct: 1   MGKRKRGADQHHNSNDPPAS-SDNIPCSSGTEALSKQKPSQFVDSSDLKPFSSGMEITDN 60

Query: 61  ------------LARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLEERPAFK 120
                       L R +F+KRSRHH+SHQY  R   +  N S+S   +     EER +FK
Sbjct: 61  SVKLLNAHHHYNLGRSVFLKRSRHHYSHQYSRRNLGNHGNGSSSL-GKGPPSREERLSFK 120

Query: 121 FAAHYNSEFPDRIESIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRRK--LCF 180
            A+H N+E     E  E  F   ERIR++SL  +A S   +++ICGICQKL+RRK  L  
Sbjct: 121 LASHCNTEPGSHAEKREKPFSRSERIRFSSLVTNAASPDTVKIICGICQKLLRRKSHLLG 180

Query: 181 LGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKRGEQE 205
           +G+T+ S E    AVLVCGHVYHA+CLE R+S ED  DPPCPLC     +V+ S  G QE
Sbjct: 181 MGSTIPSGEQHAVAVLVCGHVYHADCLEQRTSAEDIRDPPCPLCLGSLTQVESS--GVQE 236

BLAST of CSPI01G16470 vs. TAIR10
Match: AT1G75400.1 (AT1G75400.1 RING/U-box superfamily protein)

HSP 1 Score: 73.2 bits (178), Expect = 2.1e-13
Identity = 34/75 (45.33%), Postives = 49/75 (65.33%), Query Frame = 1

Query: 118 GKDAFS---SHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENR 177
           G   FS   S V + +CG C KL+  +     +++++ ELP+AAVL CGHVYHAECLE  
Sbjct: 265 GSSRFSFSPSVVDQQVCGACSKLLTER-----SSIATFELPIAAVLACGHVYHAECLETM 324

Query: 178 SSVEDRSDPPCPLCT 190
           ++  ++ DP CP+CT
Sbjct: 325 TTDIEKYDPACPICT 334

BLAST of CSPI01G16470 vs. TAIR10
Match: AT1G19680.1 (AT1G19680.1 RING/U-box superfamily protein)

HSP 1 Score: 64.7 bits (156), Expect = 7.6e-11
Identity = 28/68 (41.18%), Postives = 42/68 (61.76%), Query Frame = 1

Query: 123 SSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSD 182
           S  V +  CG C KL+  +     + ++  +LP+ AVL CGHVYHA CLE  ++  ++ D
Sbjct: 265 SPSVDQQTCGRCSKLLTER-----SPVARFDLPIPAVLACGHVYHAACLETMTNETEKYD 324

Query: 183 PPCPLCTK 191
           P CP+CT+
Sbjct: 325 PTCPICTE 327

BLAST of CSPI01G16470 vs. TAIR10
Match: AT2G21500.2 (AT2G21500.2 RING/U-box superfamily protein)

HSP 1 Score: 63.9 bits (154), Expect = 1.3e-10
Identity = 28/60 (46.67%), Postives = 38/60 (63.33%), Query Frame = 1

Query: 131 CGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCT 190
           CG C + L  + L       +++EL VAA+L CGHVYH+ECLE  +   D+ DP CP+CT
Sbjct: 251 CGACSRSLSEKSLLSSQKIFATNELSVAAILACGHVYHSECLEQMTPEIDKFDPSCPICT 310

BLAST of CSPI01G16470 vs. TAIR10
Match: AT4G39140.1 (AT4G39140.1 RING/U-box superfamily protein)

HSP 1 Score: 63.2 bits (152), Expect = 2.2e-10
Identity = 31/80 (38.75%), Postives = 43/80 (53.75%), Query Frame = 1

Query: 117 LGKDAFSSHVMRM------ICGICQKLMRRKLCFLGNTL-SSSELPVAAVLVCGHVYHAE 176
           L +D    H  RM       CG C + +  K  +    +  ++EL V+A+L CGHVYH E
Sbjct: 240 LQRDKIDHHGNRMSKHQQHTCGACSRPLSEKSLWSSQKIFMTNELSVSAILACGHVYHGE 299

Query: 177 CLENRSSVEDRSDPPCPLCT 190
           CLE  +   D+ DP CP+CT
Sbjct: 300 CLEQMTPEIDKFDPSCPICT 319

BLAST of CSPI01G16470 vs. TAIR10
Match: AT1G14180.1 (AT1G14180.1 RING/U-box superfamily protein)

HSP 1 Score: 57.0 bits (136), Expect = 1.6e-08
Identity = 33/108 (30.56%), Postives = 55/108 (50.93%), Query Frame = 1

Query: 88  AAHYNSEFPDRIESIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRRKLCFLGN 147
           A  ++S  P  I+S++    EP     N+  K    +      CG+C + + +K  +   
Sbjct: 144 ACSWSSGTPSSIDSVDVP--EPVLDWNNNSTKAQQVAASSTFKCGLCNRYLSQKSPWGSR 203

Query: 148 TL-SSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPE 195
           ++  + ++PV  VL C HV+H ECL+  +    R+DP CP+CTK   E
Sbjct: 204 SIVRNRDMPVTGVLSCQHVFHVECLDQSTPKIQRNDPLCPICTKQEGE 249

BLAST of CSPI01G16470 vs. NCBI nr
Match: gi|449465583|ref|XP_004150507.1| (PREDICTED: uncharacterized protein LOC101222911 [Cucumis sativus])

HSP 1 Score: 422.5 bits (1085), Expect = 4.1e-115
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 1

Query: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRG 60
           MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRG
Sbjct: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRG 60

Query: 61  STSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIESIESTFREPERIRYNSLGKD 120
           STSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIESIESTFREPERIRYNSLGKD
Sbjct: 61  STSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIESIESTFREPERIRYNSLGKD 120

Query: 121 AFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180
           AFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR
Sbjct: 121 AFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180

Query: 181 SDPPCPLCTKPPPEVDDSKRGEQE 205
           SDPPCPLCTKPPPEVDDSKRGEQE
Sbjct: 181 SDPPCPLCTKPPPEVDDSKRGEQE 204

BLAST of CSPI01G16470 vs. NCBI nr
Match: gi|659086424|ref|XP_008443927.1| (PREDICTED: uncharacterized protein LOC103487402 [Cucumis melo])

HSP 1 Score: 396.7 bits (1018), Expect = 2.4e-107
Identity = 194/204 (95.10%), Postives = 197/204 (96.57%), Query Frame = 1

Query: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRG 60
           MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHH+SHQYC RG
Sbjct: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHYSHQYCRRG 60

Query: 61  STSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIESIESTFREPERIRYNSLGKD 120
           STSQANAS SRENRVRTVLEERPAFKFAAH NSEFPDRIESIESTFR PERIRYNSLGKD
Sbjct: 61  STSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPDRIESIESTFRGPERIRYNSLGKD 120

Query: 121 AFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180
           A SSH+MRM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR
Sbjct: 121 AISSHLMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180

Query: 181 SDPPCPLCTKPPPEVDDSKRGEQE 205
           SDPPCPLCTK PPEVDDSK GEQE
Sbjct: 181 SDPPCPLCTKLPPEVDDSKGGEQE 204

BLAST of CSPI01G16470 vs. NCBI nr
Match: gi|694354804|ref|XP_009358549.1| (PREDICTED: uncharacterized protein LOC103949173 isoform X1 [Pyrus x bretschneideri])

HSP 1 Score: 164.5 bits (415), Expect = 2.0e-37
Identity = 96/203 (47.29%), Postives = 127/203 (62.56%), Query Frame = 1

Query: 1   MGKRKRGSDQTHHDPPL---HLSGMVPFSNQTDVRSEED-TSLARPIFMKRSRHHHSHQY 60
           M KRK  SD   H PP    H S  +P S+  D+ ++E   SL R +F++RSRHH++HQY
Sbjct: 1   MSKRKLPSDD--HSPPSFSPHSSDTMPCSSGMDLLTQEHHPSLGRSMFLRRSRHHYAHQY 60

Query: 61  CWRGSTSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIESIESTFREPERIRYNS 120
             R S + AN S SR   V  + +++ ++K A   +SE     E+ E  F  P RIR   
Sbjct: 61  SRRTSGNLANPSTSRGKGV-PLHDDKLSYKLATQSSSESRRHSEAKEKPFLWPARIRSRF 120

Query: 121 LGKDAFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSS 180
           L  DA S    +M+CGIC KL RRK  FLG+TLSS+E+ V AVLVCGH+YHA+CLE ++S
Sbjct: 121 LATDAVSPDPGKMVCGICDKLFRRKPFFLGSTLSSTEVSVVAVLVCGHLYHADCLEQKTS 180

Query: 181 VEDRSDPPCPLCTKPPPEVDDSK 200
            EDR DP CPLC    P+V+DS+
Sbjct: 181 FEDRHDPHCPLCAGLLPKVEDSR 200

BLAST of CSPI01G16470 vs. NCBI nr
Match: gi|566259735|ref|XP_006389423.1| (hypothetical protein POPTR_0025s00570g [Populus trichocarpa])

HSP 1 Score: 163.7 bits (413), Expect = 3.4e-37
Identity = 84/182 (46.15%), Postives = 115/182 (63.19%), Query Frame = 1

Query: 21  GMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLE 80
           G +   N     + ++ +L R I +KRSRHH+ HQY  R S S A+AS SR  +     +
Sbjct: 57  GSLKLLNVHHSHAHQNYNLGRSIVLKRSRHHYGHQYSRRNSGSHADASTSR-GKTALSCD 116

Query: 81  ERPAFKFAAHYNSEFPDRIESIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRR 140
           ER  FK ++H  SE     E+ E  F  P+R+R+NSL  DA SS  ++++CGICQKL+RR
Sbjct: 117 ERLTFKLSSHLGSEPGCHTENKELEFSRPDRVRFNSLVMDAVSSDALKIVCGICQKLVRR 176

Query: 141 KLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKR 200
           K  F+GN L++ E  V A+LVCGHVYH+ECLE ++S+ED  DPPCPLC+    E D  + 
Sbjct: 177 KPYFIGNALTAGEFSVVAILVCGHVYHSECLEQKTSLEDMRDPPCPLCSGLLSEEDAPRE 236

Query: 201 GE 203
            E
Sbjct: 237 QE 237

BLAST of CSPI01G16470 vs. NCBI nr
Match: gi|743806256|ref|XP_011017872.1| (PREDICTED: uncharacterized protein LOC105121076 isoform X1 [Populus euphratica])

HSP 1 Score: 161.4 bits (407), Expect = 1.7e-36
Identity = 83/182 (45.60%), Postives = 115/182 (63.19%), Query Frame = 1

Query: 21  GMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLE 80
           G +   N     + ++ +L R I +KRSRHH+ HQY  R S S A+AS SR  +     +
Sbjct: 59  GSLKLLNVHHSHARQNYNLGRSIVLKRSRHHYGHQYSRRNSGSHADASTSR-GKAALSCD 118

Query: 81  ERPAFKFAAHYNSEFPDRIESIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRR 140
           ER  FK ++H  SE    + + E  F  P+R+R+NSL  DA  S  ++++CGICQKL+RR
Sbjct: 119 ERLTFKLSSHLGSEPGCHMGNKELEFSRPDRVRFNSLVMDAVLSDALKVVCGICQKLVRR 178

Query: 141 KLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKR 200
           K  F+GN L++ E  V A+LVCGHVYH+ECLE ++S+ED  DPPCPLC+    E D S+ 
Sbjct: 179 KPYFIGNALTAGEFSVVAILVCGHVYHSECLEQKTSLEDMRDPPCPLCSGLLSEEDASRE 238

Query: 201 GE 203
            E
Sbjct: 239 QE 239

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LT71_CUCSA2.8e-115100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G217850 PE=4 SV=1[more]
A9P889_POPTR2.4e-3746.15Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0025s00570g PE=2 SV=1[more]
A5AFH6_VITVI7.6e-3649.72Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009874 PE=4 SV=1[more]
D7T4X1_VITVI7.6e-3649.72Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0118g00330 PE=4 SV=... [more]
V4UUQ1_9ROSI7.6e-3642.50Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009344mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G75400.12.1e-1345.33 RING/U-box superfamily protein[more]
AT1G19680.17.6e-1141.18 RING/U-box superfamily protein[more]
AT2G21500.21.3e-1046.67 RING/U-box superfamily protein[more]
AT4G39140.12.2e-1038.75 RING/U-box superfamily protein[more]
AT1G14180.11.6e-0830.56 RING/U-box superfamily protein[more]
Match NameE-valueIdentityDescription
gi|449465583|ref|XP_004150507.1|4.1e-115100.00PREDICTED: uncharacterized protein LOC101222911 [Cucumis sativus][more]
gi|659086424|ref|XP_008443927.1|2.4e-10795.10PREDICTED: uncharacterized protein LOC103487402 [Cucumis melo][more]
gi|694354804|ref|XP_009358549.1|2.0e-3747.29PREDICTED: uncharacterized protein LOC103949173 isoform X1 [Pyrus x bretschneide... [more]
gi|566259735|ref|XP_006389423.1|3.4e-3746.15hypothetical protein POPTR_0025s00570g [Populus trichocarpa][more]
gi|743806256|ref|XP_011017872.1|1.7e-3645.60PREDICTED: uncharacterized protein LOC105121076 isoform X1 [Populus euphratica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR027370Znf-RING_LisH
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G16470.1CSPI01G16470.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 131..188
score: 1.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 131..189
score: 10
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 128..193
score: 1.
IPR027370RING-type zinc-finger, LisH dimerisation motifPFAMPF13445zf-RING_UBOXcoord: 131..185
score: 1.
NoneNo IPR availablePANTHERPTHR31150FAMILY NOT NAMEDcoord: 39..198
score: 2.4
NoneNo IPR availablePANTHERPTHR31150:SF6SUBFAMILY NOT NAMEDcoord: 39..198
score: 2.4
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 130..193
score: 5.98