CSPI01G16470 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGATTTAGGAAGGGCATCGGTCAAAAAGGAAAAGGGAATAATATGAAAGGAAGAGGAAGAGGGTTAGAAGAAGTCGAATAAATCATACATACAACAAATCAATTGTTCATCTCTTCTTTACTCATTTTCTTGAACCGTAAATCCCCAGCAATTACAATTATATCAAATCCACCTTTCTGTTTCTGCTCCCAAAAGGCCCCAAACAAAACAAAGAAACCATTCTTTCAATCCATTTCAAAGCATCATCGCCTAAATTTAACCTCCAAATTATATCAATCATCACTCTCTTCGCTTCATTTACAATCTTAATTACTATGGGGAAGCGCAAGCGAGGCTCTGATCAGACCCACCACGATCCTCCTCTTCATCTCTCCGGTATATGCTCTTTCTTTCTCCGATCATATAATCATGCCCGCTTTCTATTTGATAAAATGTCTCAAAGGGACGATTCATTTGTATACGTACACGGTTTTTCTTGTGTGGGGTGTCTCTCGATACGGCGAATCTTATTTTTCTTGAGCTTTGAGAATCAATGGGGTGTATGGGTTTTCTAAGTAATTGGCATTTTTGGATTTCTTTTGAAGAATGAAAATTTTGGATGGCTGGGGGAAATAAAGAATGAAGGGTAGTTTTTCTTTCCCTTTTTAAGTAATATTGGGGTTGGTTTGGGCCTCTTTAAGGATGCATTCTGATTTAGAGATGTAGTTTGATGACTAATCTAAGTCATTTGGCTACTTCATTACCTTTTGGTATGAGCTTTGGCTGGATGCATTTGGGTTGTGTTTCATTTGATTATATCAAGATCAAGATGTGTTGTTCTAGATATCAAGGTGGGGTTGAGTTAATTTTACGCTTTACAACTGATAATTAAGTGAACTCTATGTATGTTTTGTAGTTGGGGTTTCACAAGGTGGGGTTGATGGAATTCCAATTATCCTTTATTTTGAATAATGAAATGTAACATGATTTGTATGTATGTTGTAGGTATGGTTCCTTTTTCTAATCAGACGGATGTGCGGTCGGAAGAGGTCTGTACTCTTTTGTTTGCTTAAGTGAGTAGACAAAAGAATATTTTAATGTTTTCCCTTAGTAGAGAGCATTGAAGTCAGTTTTTTTTTTTTCTTTCTTTTTCCTGCTAGTGGACCACATTCTATTAAACTTACACTGCATTGAATCAACAGGATACGAGTCTTGCCCGTCCAATATTCATGAAACGTTCACGTCATCACCATAGCCATCAATATTGTTGGCGAGGTTCAACCAGTCAAGCAAATGCATCTGCGTCCCGTGAAAACCGAGTCAGAACTGTCCTTGAGGAACGACCCGCTTTTAAATTTGCTGCTCATTACAACTCAGAGTTTCCAGACCGTATAGGTACCCTTTTTGAATGAGAGTACTTCTCATGATGGCATGCTAAGTACTTGTTCTTTAAATGTTATAAAGATATTTGAAAATTCATACCCTATATATTATTATGTGCCTCTCTCTAATCAGATGAGAAGACCTGAAAACCTAAATAATGCTAGACATAGGTGTTATGTAAATGTACACCACATCTCAAGTTAATTAAATTTCAACGTTTCTTCTAGTTGGATGATCAGACACCTTGCTTTCAAATATGTTTTGACTGTGTTTGGAGTGACTTGTGACTTATAAAAAATGTGCTTTTAAGCATTTAGAAAATCATTCCACATGGGCAATTCACATTCTTTTTTATGTAAATATATTAGATATCAGTTGCCTGTTTTTTTCTCTCATTTATTTGTAGTTTTGGTGATTTTGGTTCTTGAATTTTGAATAAAGAACAGTCAATTGTTTGGCACGAAACACTTATTTTATGAAGGAAGACGTCCTAAATAAACACATCTTAGGTATTAGAGACCTGAGCCAAATTAAATCCTAATGATCATCTACAAAATGATTAATGAAGATGAAGTATATAACAATATATTAGCCTGTCATCCCACACCATTTGAAGCTCTCGCTCCAGTGGGTGAAGATAGTTGCTTCTTCTACATTGATAATGTTGTTCTTCTGTATTAACTAAATTTTTGCTTCAATTTTAGAGAGCATTGAGAGCACCTTTAGGGAGCCAGAAAGGATAAGGTACAATTCCTTGGGGAAGGATGCTTTTTCATCTCATGTAATGAGAATGATATGTGGTATTTGCCAGAAGCTGATGAGACGAAAGCTTTGCTTTCTAGGGAACACACTTTCTTCTAGTGAACTTCCCGTTGCTGCGGTTTTAGTTTGTGGCCATGTCTATCATGCAGAATGTCTGGAGAACAGGTCAAGTGTGGAAGATAGAAGCGACCCACCTTGTCCATTGTGCACAAAACCGCCTCCTGAAGTCGATGATTCAAAAAGAGGAGAACAAGAATGAGTGGAGTTGTACATATGTTATCACATAGCACCAACATAGGAAATAGAGAACTTGGTTCTGACTTGAATGGGCATATCAAAAAGTGGAGTTTTTGCATCCTCGATTGATTTTCCAAACTAATCAATCACTGTTTTCTCTGGATGGCTGTGATTTAGAAACAGAAAATAGTAACTTTGAATCACAACCATTCAGAAAATAGCGATAATGGGTTGAAAGGTAACAAGGATTTGCCCTCCTTAGATTTCTTTTTGTGTAGAGCTAGATTGACATATGGAAGTCCTTTGGTACCTTATGGAAACATTGTTATCTTGCATAGCAGCAGAGGATTTTAGTCGAGACATCTTCATGGTATTTTGTACTTTTTATATCAATGTCTAAAATAGTATATTTTAGAAAGTATCGATGTTAGCAAAGTTATAATGGAAGTAGATTTTTGTGTTTTCCTTGTAGAAAAAATGATGGTAATGAGTAATCTATTTCAAAGGTTGTG ATGGGGAAGCGCAAGCGAGGCTCTGATCAGACCCACCACGATCCTCCTCTTCATCTCTCCGGTATGGTTCCTTTTTCTAATCAGACGGATGTGCGGTCGGAAGAGGATACGAGTCTTGCCCGTCCAATATTCATGAAACGTTCACGTCATCACCATAGCCATCAATATTGTTGGCGAGGTTCAACCAGTCAAGCAAATGCATCTGCGTCCCGTGAAAACCGAGTCAGAACTGTCCTTGAGGAACGACCCGCTTTTAAATTTGCTGCTCATTACAACTCAGAGTTTCCAGACCGTATAGAGAGCATTGAGAGCACCTTTAGGGAGCCAGAAAGGATAAGGTACAATTCCTTGGGGAAGGATGCTTTTTCATCTCATGTAATGAGAATGATATGTGGTATTTGCCAGAAGCTGATGAGACGAAAGCTTTGCTTTCTAGGGAACACACTTTCTTCTAGTGAACTTCCCGTTGCTGCGGTTTTAGTTTGTGGCCATGTCTATCATGCAGAATGTCTGGAGAACAGGTCAAGTGTGGAAGATAGAAGCGACCCACCTTGTCCATTGTGCACAAAACCGCCTCCTGAAGTCGATGATTCAAAAAGAGGAGAACAAGAATGA ATGGGGAAGCGCAAGCGAGGCTCTGATCAGACCCACCACGATCCTCCTCTTCATCTCTCCGGTATGGTTCCTTTTTCTAATCAGACGGATGTGCGGTCGGAAGAGGATACGAGTCTTGCCCGTCCAATATTCATGAAACGTTCACGTCATCACCATAGCCATCAATATTGTTGGCGAGGTTCAACCAGTCAAGCAAATGCATCTGCGTCCCGTGAAAACCGAGTCAGAACTGTCCTTGAGGAACGACCCGCTTTTAAATTTGCTGCTCATTACAACTCAGAGTTTCCAGACCGTATAGAGAGCATTGAGAGCACCTTTAGGGAGCCAGAAAGGATAAGGTACAATTCCTTGGGGAAGGATGCTTTTTCATCTCATGTAATGAGAATGATATGTGGTATTTGCCAGAAGCTGATGAGACGAAAGCTTTGCTTTCTAGGGAACACACTTTCTTCTAGTGAACTTCCCGTTGCTGCGGTTTTAGTTTGTGGCCATGTCTATCATGCAGAATGTCTGGAGAACAGGTCAAGTGTGGAAGATAGAAGCGACCCACCTTGTCCATTGTGCACAAAACCGCCTCCTGAAGTCGATGATTCAAAAAGAGGAGAACAAGAATGA
BLAST of CSPI01G16470 vs. TrEMBL
Match: A0A0A0LT71_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G217850 PE=4 SV=1) HSP 1 Score: 422.5 bits (1085), Expect = 2.8e-115 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 1
BLAST of CSPI01G16470 vs. TrEMBL
Match: A9P889_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0025s00570g PE=2 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 2.4e-37 Identity = 84/182 (46.15%), Postives = 115/182 (63.19%), Query Frame = 1
BLAST of CSPI01G16470 vs. TrEMBL
Match: A5AFH6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009874 PE=4 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 7.6e-36 Identity = 89/179 (49.72%), Postives = 112/179 (62.57%), Query Frame = 1
BLAST of CSPI01G16470 vs. TrEMBL
Match: D7T4X1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0118g00330 PE=4 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 7.6e-36 Identity = 89/179 (49.72%), Postives = 112/179 (62.57%), Query Frame = 1
BLAST of CSPI01G16470 vs. TrEMBL
Match: V4UUQ1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009344mg PE=4 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 7.6e-36 Identity = 102/240 (42.50%), Postives = 132/240 (55.00%), Query Frame = 1
BLAST of CSPI01G16470 vs. TAIR10
Match: AT1G75400.1 (AT1G75400.1 RING/U-box superfamily protein) HSP 1 Score: 73.2 bits (178), Expect = 2.1e-13 Identity = 34/75 (45.33%), Postives = 49/75 (65.33%), Query Frame = 1
BLAST of CSPI01G16470 vs. TAIR10
Match: AT1G19680.1 (AT1G19680.1 RING/U-box superfamily protein) HSP 1 Score: 64.7 bits (156), Expect = 7.6e-11 Identity = 28/68 (41.18%), Postives = 42/68 (61.76%), Query Frame = 1
BLAST of CSPI01G16470 vs. TAIR10
Match: AT2G21500.2 (AT2G21500.2 RING/U-box superfamily protein) HSP 1 Score: 63.9 bits (154), Expect = 1.3e-10 Identity = 28/60 (46.67%), Postives = 38/60 (63.33%), Query Frame = 1
BLAST of CSPI01G16470 vs. TAIR10
Match: AT4G39140.1 (AT4G39140.1 RING/U-box superfamily protein) HSP 1 Score: 63.2 bits (152), Expect = 2.2e-10 Identity = 31/80 (38.75%), Postives = 43/80 (53.75%), Query Frame = 1
BLAST of CSPI01G16470 vs. TAIR10
Match: AT1G14180.1 (AT1G14180.1 RING/U-box superfamily protein) HSP 1 Score: 57.0 bits (136), Expect = 1.6e-08 Identity = 33/108 (30.56%), Postives = 55/108 (50.93%), Query Frame = 1
BLAST of CSPI01G16470 vs. NCBI nr
Match: gi|449465583|ref|XP_004150507.1| (PREDICTED: uncharacterized protein LOC101222911 [Cucumis sativus]) HSP 1 Score: 422.5 bits (1085), Expect = 4.1e-115 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 1
BLAST of CSPI01G16470 vs. NCBI nr
Match: gi|659086424|ref|XP_008443927.1| (PREDICTED: uncharacterized protein LOC103487402 [Cucumis melo]) HSP 1 Score: 396.7 bits (1018), Expect = 2.4e-107 Identity = 194/204 (95.10%), Postives = 197/204 (96.57%), Query Frame = 1
BLAST of CSPI01G16470 vs. NCBI nr
Match: gi|694354804|ref|XP_009358549.1| (PREDICTED: uncharacterized protein LOC103949173 isoform X1 [Pyrus x bretschneideri]) HSP 1 Score: 164.5 bits (415), Expect = 2.0e-37 Identity = 96/203 (47.29%), Postives = 127/203 (62.56%), Query Frame = 1
BLAST of CSPI01G16470 vs. NCBI nr
Match: gi|566259735|ref|XP_006389423.1| (hypothetical protein POPTR_0025s00570g [Populus trichocarpa]) HSP 1 Score: 163.7 bits (413), Expect = 3.4e-37 Identity = 84/182 (46.15%), Postives = 115/182 (63.19%), Query Frame = 1
BLAST of CSPI01G16470 vs. NCBI nr
Match: gi|743806256|ref|XP_011017872.1| (PREDICTED: uncharacterized protein LOC105121076 isoform X1 [Populus euphratica]) HSP 1 Score: 161.4 bits (407), Expect = 1.7e-36 Identity = 83/182 (45.60%), Postives = 115/182 (63.19%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |