Carg09951 (gene) Silver-seed gourd

Overview
NameCarg09951
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionZinc finger, RING-type
LocationCucurbita_argyrosperma_scaffold_030 : 666647 .. 667784 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGGTACGTATGTTGCAGGTATAGTGCCATTTTCCAATCAAATGGATGTGCGGTCAGAAGAGGTTTGTACTCTTTTGTTTTCTTCAGTGAACAGGCAAAAGAATACTTCAATCCTTTCCATTTCTAGGGAAAGCATTTAAGCTAAGTCTTTTCCTTTTACTGAACCACAATCTATTAAACTTATGTTGCATTAAACCAGCAGGATCGGAGTCTCGCCCGTCCAATATTCATGAAACGTTCACGTCATCAGTATAGTCATCAATATTGTCGACGAGGTTCAACCAGTCAAGCAAATGCATCCACCTCCCGCGAAAACCGAGTTCGAACCATACTCGAAAAACGTCCCGCTTTTAAATTTGCAGCTCACTGCAACTCAGAGTTTCCAGATCATATAGGTACCCTTTTTGAGTTTTGGGAATCAGAGTACTTTTCACAATGGCATAAATGTTATAAGATATTTGAAAATCCGTTCTTCGTGTATTACGTGGCGCTCTCTAATTAGACGAAAAGACCTGAAAACATAAACAGTTCTTGTGGTTAGCTGACAAGGCACCTTGTGTGATGTCCCACATTAGTTGGAGAGAAGAACAAACTACCTTTTATAAGAGTGTGGAAACCTCCCCTAGCAAACGCGTTTTAAAGCCTTGAGGGGAGCCCATAAGGAAAAGCCCAAAAAGGATAATATCGGCTAGCGGTGGAATTGGGTTCTTACACCTTGCTTTGAATTAGATATCATGTTCTTTGTGACATCAATATAATGGATATCAGTGGCCTTCGCTTCTTCTACATTGATGATGTTGTTCTCCTTTTACCTTGATTTCAGAGAGCAATGAGAGCACCTTCTTGAGGCCAGAAAGGATAAGGTACAATTCCTTAGGGAAGGATACAATTTCATCTCATGGAAGGAAAATAGTATGTGGGATTTGTCAAAAGCTGATGAGACGAAAGCTTTGCTTCCTCGGTAACACGTTGTCTTCCAGCGAACTTCCCGTTGCTGCGGTTTTGGTATGTGGCCATGTCTATCATGCAGACTGTCTGGAGAACGGGTCAAACGTCGAAGATAGAAGCGATCCCCGTTGTCCATTGTGCATGGAACCGCCTGCAAAAGTCGACGATTCAACCGAGCAGGAATGA

mRNA sequence

ATGTTTGGTACGTATGTTGCAGGTATAGTGCCATTTTCCAATCAAATGGATGTGCGGTCAGAAGAGGATCGGAGTCTCGCCCGTCCAATATTCATGAAACGTTCACGTCATCAGTATAGTCATCAATATTGTCGACGAGGTTCAACCAGTCAAGCAAATGCATCCACCTCCCGCGAAAACCGAGTTCGAACCATACTCGAAAAACGTCCCGCTTTTAAATTTGCAGCTCACTGCAACTCAGAGTTTCCAGATCATATAGAGAGCAATGAGAGCACCTTCTTGAGGCCAGAAAGGATAAGGTACAATTCCTTAGGGAAGGATACAATTTCATCTCATGGAAGGAAAATAGTATGTGGGATTTGTCAAAAGCTGATGAGACGAAAGCTTTGCTTCCTCGGTAACACGTTGTCTTCCAGCGAACTTCCCGTTGCTGCGGTTTTGGTATGTGGCCATGTCTATCATGCAGACTGTCTGGAGAACGGGTCAAACGTCGAAGATAGAAGCGATCCCCGTTGTCCATTGTGCATGGAACCGCCTGCAAAAGTCGACGATTCAACCGAGCAGGAATGA

Coding sequence (CDS)

ATGTTTGGTACGTATGTTGCAGGTATAGTGCCATTTTCCAATCAAATGGATGTGCGGTCAGAAGAGGATCGGAGTCTCGCCCGTCCAATATTCATGAAACGTTCACGTCATCAGTATAGTCATCAATATTGTCGACGAGGTTCAACCAGTCAAGCAAATGCATCCACCTCCCGCGAAAACCGAGTTCGAACCATACTCGAAAAACGTCCCGCTTTTAAATTTGCAGCTCACTGCAACTCAGAGTTTCCAGATCATATAGAGAGCAATGAGAGCACCTTCTTGAGGCCAGAAAGGATAAGGTACAATTCCTTAGGGAAGGATACAATTTCATCTCATGGAAGGAAAATAGTATGTGGGATTTGTCAAAAGCTGATGAGACGAAAGCTTTGCTTCCTCGGTAACACGTTGTCTTCCAGCGAACTTCCCGTTGCTGCGGTTTTGGTATGTGGCCATGTCTATCATGCAGACTGTCTGGAGAACGGGTCAAACGTCGAAGATAGAAGCGATCCCCGTTGTCCATTGTGCATGGAACCGCCTGCAAAAGTCGACGATTCAACCGAGCAGGAATGA

Protein sequence

MFGTYVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDDSTEQE
Homology
[Close]
BLAST of Carg09951 vs. NCBI nr
Match: XP_022961020.1 (uncharacterized protein LOC111461650 isoform X2 [Cucurbita moschata])

HSP 1 Score: 372.5 bits (955), Expect = 8.7e-100
Identity = 179/185 (96.76%), Postives = 184/185 (99.46%), Query Frame = 0 

Query: 5   YVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRT 64
           +++GIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTS+ANASTSRENRVRT
Sbjct: 24  HLSGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVRT 83

Query: 65  ILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKDTISSHGRKIVCGICQKL 124
           ILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKDTISSHGRKIVCGICQKL
Sbjct: 84  ILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKDTISSHGRKIVCGICQKL 143

Query: 125 MRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDD 184
           MRRKLCFLGNTLSSSELP+AAVLVCGHVYHADCLENGSNVEDRSDP CPLCMEPPAKVDD
Sbjct: 144 MRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLCMEPPAKVDD 203

Query: 185 STEQE 190
           STEQE
Sbjct: 204 STEQE 208

[Close]
BLAST of Carg09951 vs. NCBI nr
Match: XP_023516462.1 (uncharacterized protein LOC111780320 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 370.5 bits (950), Expect = 3.3e-99
Identity = 179/185 (96.76%), Postives = 183/185 (98.92%), Query Frame = 0 

Query: 5   YVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRT 64
           +++GIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRT
Sbjct: 24  HLSGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRT 83

Query: 65  ILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKDTISSHGRKIVCGICQKL 124
           ILEKRPAFKFAAHCNSEFP HIESNESTFLRPERIRYNSLGKDTI SHGRKIVCGICQKL
Sbjct: 84  ILEKRPAFKFAAHCNSEFPYHIESNESTFLRPERIRYNSLGKDTILSHGRKIVCGICQKL 143

Query: 125 MRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDD 184
           MRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSN+EDRSDPRCPLCMEPPAKVDD
Sbjct: 144 MRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNIEDRSDPRCPLCMEPPAKVDD 203

Query: 185 STEQE 190
           STEQE
Sbjct: 204 STEQE 208

[Close]
BLAST of Carg09951 vs. NCBI nr
Match: XP_022961019.1 (uncharacterized protein LOC111461650 isoform X1 [Cucurbita moschata])

HSP 1 Score: 367.9 bits (943), Expect = 2.1e-98
Identity = 179/186 (96.24%), Postives = 184/186 (98.92%), Query Frame = 0 

Query: 5   YVAGIVPFSNQMDVRSEE-DRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVR 64
           +++GIVPFSNQMDVRSEE DRSLARPIFMKRSRHQYSHQYCRRGSTS+ANASTSRENRVR
Sbjct: 24  HLSGIVPFSNQMDVRSEEQDRSLARPIFMKRSRHQYSHQYCRRGSTSEANASTSRENRVR 83

Query: 65  TILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKDTISSHGRKIVCGICQK 124
           TILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKDTISSHGRKIVCGICQK
Sbjct: 84  TILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKDTISSHGRKIVCGICQK 143

Query: 125 LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVD 184
           LMRRKLCFLGNTLSSSELP+AAVLVCGHVYHADCLENGSNVEDRSDP CPLCMEPPAKVD
Sbjct: 144 LMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDRSDPGCPLCMEPPAKVD 203

Query: 185 DSTEQE 190
           DSTEQE
Sbjct: 204 DSTEQE 209

[Close]
BLAST of Carg09951 vs. NCBI nr
Match: XP_023516461.1 (uncharacterized protein LOC111780320 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 365.9 bits (938), Expect = 8.1e-98
Identity = 179/186 (96.24%), Postives = 183/186 (98.39%), Query Frame = 0 

Query: 5   YVAGIVPFSNQMDVRSEE-DRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVR 64
           +++GIVPFSNQMDVRSEE DRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVR
Sbjct: 24  HLSGIVPFSNQMDVRSEEQDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVR 83

Query: 65  TILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKDTISSHGRKIVCGICQK 124
           TILEKRPAFKFAAHCNSEFP HIESNESTFLRPERIRYNSLGKDTI SHGRKIVCGICQK
Sbjct: 84  TILEKRPAFKFAAHCNSEFPYHIESNESTFLRPERIRYNSLGKDTILSHGRKIVCGICQK 143

Query: 125 LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVD 184
           LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSN+EDRSDPRCPLCMEPPAKVD
Sbjct: 144 LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNIEDRSDPRCPLCMEPPAKVD 203

Query: 185 DSTEQE 190
           DSTEQE
Sbjct: 204 DSTEQE 209

[Close]
BLAST of Carg09951 vs. NCBI nr
Match: XP_022987873.1 (uncharacterized protein LOC111485281 isoform X2 [Cucurbita maxima])

HSP 1 Score: 364.0 bits (933), Expect = 3.1e-97
Identity = 176/185 (95.14%), Postives = 179/185 (96.76%), Query Frame = 0 

Query: 5   YVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRT 64
           +++GIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQ NASTSRENRVRT
Sbjct: 24  HLSGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQENASTSRENRVRT 83

Query: 65  ILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKDTISSHGRKIVCGICQKL 124
           ILEKRP FKFAAHCNSEFPDHIESNE TFLRPERIRYNS GKDTISSHGRKIVCGICQKL
Sbjct: 84  ILEKRPTFKFAAHCNSEFPDHIESNERTFLRPERIRYNSSGKDTISSHGRKIVCGICQKL 143

Query: 125 MRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDD 184
           MRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDD
Sbjct: 144 MRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDD 203

Query: 185 STEQE 190
           S  QE
Sbjct: 204 SIGQE 208

[Close]
BLAST of Carg09951 vs. TAIR10
Match: AT1G75400.1 (RING/U-box superfamily protein)

HSP 1 Score: 68.2 bits (165), Expect = 6.3e-12
Identity = 28/59 (47.46%), Postives = 41/59 (69.49%), Query Frame = 0 

Query: 117 VCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLC 176
           VCG C KL+  +     +++++ ELP+AAVL CGHVYHA+CLE  +   ++ DP CP+C
Sbjct: 280 VCGACSKLLTER-----SSIATFELPIAAVLACGHVYHAECLETMTTDIEKYDPACPIC 333

[Close]
BLAST of Carg09951 vs. TAIR10
Match: AT1G19680.1 (RING/U-box superfamily protein)

HSP 1 Score: 64.3 bits (155), Expect = 9.2e-11
Identity = 27/60 (45.00%), Postives = 38/60 (63.33%), Query Frame = 0 

Query: 118 CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCME 177
           CG C KL+  +     + ++  +LP+ AVL CGHVYHA CLE  +N  ++ DP CP+C E
Sbjct: 273 CGRCSKLLTER-----SPVARFDLPIPAVLACGHVYHAACLETMTNETEKYDPTCPICTE 327

[Close]
BLAST of Carg09951 vs. TAIR10
Match: AT4G39140.1 (RING/U-box superfamily protein)

HSP 1 Score: 61.6 bits (148), Expect = 5.9e-10
Identity = 45/174 (25.86%), Postives = 75/174 (43.10%), Query Frame = 0 

Query: 11  PFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTI--LEK 70
           P S+Q  +      +L      + S+     Q   + S S+++A+  R+         + 
Sbjct: 145 PLSSQSYLHPASSSTLKLTQHPRLSKQVSDGQIYGQNSLSRSSATEERQGTPTRYDSSQS 204

Query: 71  RPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKDTISSHGRKI------VCGICQ 130
            P+  ++    SE      SN++            L +D I  HG ++       CG C 
Sbjct: 205 GPSEGWSLQAFSEMMSSSRSNKALSYDNYDNDCFGLQRDKIDHHGNRMSKHQQHTCGACS 264

Query: 131 K-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLC 176
           + L  + L        ++EL V+A+L CGHVYH +CLE  +   D+ DP CP+C
Sbjct: 265 RPLSEKSLWSSQKIFMTNELSVSAILACGHVYHGECLEQMTPEIDKFDPSCPIC 318

[Close]
BLAST of Carg09951 vs. TAIR10
Match: AT2G21500.2 (RING/U-box superfamily protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.3e-09
Identity = 26/59 (44.07%), Postives = 37/59 (62.71%), Query Frame = 0 

Query: 118 CGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLC 176
           CG C + L  + L       +++EL VAA+L CGHVYH++CLE  +   D+ DP CP+C
Sbjct: 251 CGACSRSLSEKSLLSSQKIFATNELSVAAILACGHVYHSECLEQMTPEIDKFDPSCPIC 309

[Close]
BLAST of Carg09951 vs. TAIR10
Match: AT5G18260.1 (RING/U-box superfamily protein)

HSP 1 Score: 55.5 bits (132), Expect = 4.3e-08
Identity = 23/59 (38.98%), Postives = 33/59 (55.93%), Query Frame = 0 

Query: 118 CGICQKLMRRKLCFLG-NTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLC 176
           CGIC+KL+ +K  +     L S ++P   V  C HVYH +CL+  +      DP CP+C
Sbjct: 192 CGICKKLLSQKSPWSSYKILRSRDMPATGVFPCHHVYHVECLDKATPTAQTRDPSCPVC 250

[Close]
BLAST of Carg09951 vs. TrEMBL
Match: tr|A0A1S3B956|A0A1S3B956_CUCME (uncharacterized protein LOC103487402 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487402 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 2.2e-83
Identity = 157/187 (83.96%), Postives = 169/187 (90.37%), Query Frame = 0 

Query: 5   YVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRT 64
           +++G+VPFSNQ DVRSEED SLARPIFMKRSRH YSHQYCRRGSTSQANASTSRENRVRT
Sbjct: 18  HLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHYSHQYCRRGSTSQANASTSRENRVRT 77

Query: 65  ILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKDTISSHGRKIVCGICQKL 124
           +LE+RPAFKFAAHCNSEFPD IES ESTF  PERIRYNSLGKD ISSH  ++VCGICQKL
Sbjct: 78  VLEERPAFKFAAHCNSEFPDRIESIESTFRGPERIRYNSLGKDAISSHLMRMVCGICQKL 137

Query: 125 MRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDD 184
           MRRKLCFLGNTLSSSELPVAAVLVCGHVYHA+CLEN S+VEDRSDP CPLC + P +VDD
Sbjct: 138 MRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKLPPEVDD 197

Query: 185 ST--EQE 190
           S   EQE
Sbjct: 198 SKGGEQE 204

[Close]
BLAST of Carg09951 vs. TrEMBL
Match: tr|A0A1S4DUW7|A0A1S4DUW7_CUCME (uncharacterized protein LOC103487402 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487402 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 6.4e-83
Identity = 157/184 (85.33%), Postives = 166/184 (90.22%), Query Frame = 0 

Query: 8   GIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTILE 67
           G+VPFSNQ DVRSEED SLARPIFMKRSRH YSHQYCRRGSTSQANASTSRENRVRT+LE
Sbjct: 22  GMVPFSNQTDVRSEEDTSLARPIFMKRSRHHYSHQYCRRGSTSQANASTSRENRVRTVLE 81

Query: 68  KRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKDTISSHGRKIVCGICQKLMRR 127
           +RPAFKFAAHCNSEFPD IES ESTF  PERIRYNSLGKD ISSH  ++VCGICQKLMRR
Sbjct: 82  ERPAFKFAAHCNSEFPDRIESIESTFRGPERIRYNSLGKDAISSHLMRMVCGICQKLMRR 141

Query: 128 KLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDDST- 187
           KLCFLGNTLSSSELPVAAVLVCGHVYHA+CLEN S+VEDRSDP CPLC + P +VDDS  
Sbjct: 142 KLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKLPPEVDDSKG 201

Query: 188 -EQE 190
            EQE
Sbjct: 202 GEQE 205

[Close]
BLAST of Carg09951 vs. TrEMBL
Match: tr|A0A0A0LT71|A0A0A0LT71_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G217850 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 4.6e-81
Identity = 150/185 (81.08%), Postives = 164/185 (88.65%), Query Frame = 0 

Query: 5   YVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRT 64
           +++G+VPFSNQ DVRSEED SLARPIFMKRSRH +SHQYC RGSTSQANAS SRENRVRT
Sbjct: 18  HLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRT 77

Query: 65  ILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKDTISSHGRKIVCGICQKL 124
           +LE+RPAFKFAAH NSEFPD IES ESTF  PERIRYNSLGKD  SSH  +++CGICQKL
Sbjct: 78  VLEERPAFKFAAHYNSEFPDRIESIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKL 137

Query: 125 MRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDD 184
           MRRKLCFLGNTLSSSELPVAAVLVCGHVYHA+CLEN S+VEDRSDP CPLC +PP +VDD
Sbjct: 138 MRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDD 197

Query: 185 STEQE 190
           S   E
Sbjct: 198 SKRGE 202

[Close]
BLAST of Carg09951 vs. TrEMBL
Match: tr|A0A2N9F746|A0A2N9F746_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14628 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.7e-41
Identity = 93/162 (57.41%), Postives = 109/162 (67.28%), Query Frame = 0 

Query: 14  NQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTILEKRPAFK 73
           N     +   +SL R IF+KRSRH YSHQY RR S +  NASTSR     T  ++R +FK
Sbjct: 42  NAHPTAAHHHQSLGRSIFLKRSRHHYSHQYSRRNSANHPNASTSRGKGAST-RDERLSFK 101

Query: 74  FAAHCNSEFPDHIESNESTFLRPERIRYNSLGKDTISSHGRKIVCGICQKLMRRKLCFLG 133
            A  CNS+   H E+ ES F RPERIR +SL  D +SS   K+VCG CQK +RRK  FLG
Sbjct: 102 LATQCNSQTGHHSENRESVFCRPERIRSSSLVMDAMSSDVVKMVCGTCQKPLRRKPYFLG 161

Query: 134 NTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLC 176
           +TLSS EL V AVLVCGHVYHA+CLE  + VEDR DP CPLC
Sbjct: 162 STLSSGELSVVAVLVCGHVYHAECLEQRTCVEDRRDPTCPLC 202

[Close]
BLAST of Carg09951 vs. TrEMBL
Match: tr|A0A2P5FUX3|A0A2P5FUX3_9ROSA (43kDa postsynaptic protein OS=Trema orientalis OX=63057 GN=TorRG33x02_023420 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.8e-40
Identity = 91/166 (54.82%), Postives = 113/166 (68.07%), Query Frame = 0 

Query: 24  RSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTILEKRPAFKFAAHCNSEFP 83
           +SL R +F+KRSRH Y+HQY RRGS + AN STSR  +V ++ + + +FK AA CNSE  
Sbjct: 73  QSLGRSLFLKRSRHHYAHQYSRRGSANLANPSTSR-GKVTSLRDDKLSFKLAAQCNSELG 132

Query: 84  DHIESNESTFLRPERIRYNSLGKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPV 143
            H E  E  F RPERIR  SL  DT+S+   K +C ICQK +RRKL F G + SS EL V
Sbjct: 133 RHSEFREKAFFRPERIRSRSLVPDTVSTDLAKTICVICQKPLRRKLYFPGISTSSVELSV 192

Query: 144 AAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDDSTEQE 190
            AVLVCGH+YHADCLE  ++ EDR DP CP C    ++VDD  EQ+
Sbjct: 193 VAVLVCGHLYHADCLEPKTSFEDRRDPPCPACTGLLSQVDDEREQD 237

The following BLAST results are available for this feature:
BLAST of Carg09951 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022961020.18.7e-10096.76uncharacterized protein LOC111461650 isoform X2 [Cucurbita moschata][more]
XP_023516462.13.3e-9996.76uncharacterized protein LOC111780320 isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022961019.12.1e-9896.24uncharacterized protein LOC111461650 isoform X1 [Cucurbita moschata][more]
XP_023516461.18.1e-9896.24uncharacterized protein LOC111780320 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022987873.13.1e-9795.14uncharacterized protein LOC111485281 isoform X2 [Cucurbita maxima][more]
BLAST of Carg09951 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G75400.16.3e-1247.46RING/U-box superfamily protein[more]
AT1G19680.19.2e-1145.00RING/U-box superfamily protein[more]
AT4G39140.15.9e-1025.86RING/U-box superfamily protein[more]
AT2G21500.21.3e-0944.07RING/U-box superfamily protein[more]
AT5G18260.14.3e-0838.98RING/U-box superfamily protein[more]
BLAST of Carg09951 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg09951 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B956|A0A1S3B956_CUCME2.2e-8383.96uncharacterized protein LOC103487402 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S4DUW7|A0A1S4DUW7_CUCME6.4e-8385.33uncharacterized protein LOC103487402 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A0A0LT71|A0A0A0LT71_CUCSA4.6e-8181.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G217850 PE=4 SV=1[more]
tr|A0A2N9F746|A0A2N9F746_FAGSY2.7e-4157.41Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14628 PE=4 SV=1[more]
tr|A0A2P5FUX3|A0A2P5FUX3_9ROSA1.8e-4054.8243kDa postsynaptic protein OS=Trema orientalis OX=63057 GN=TorRG33x02_023420 PE=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR027370Znf-RING_LisH
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg09951-RACarg09951-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 118..175
e-value: 1.1E-4
score: 31.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 118..175
score: 10.262
IPR027370RING-type zinc-finger, LisH dimerisation motifPFAMPF13445zf-RING_UBOXcoord: 118..173
e-value: 1.2E-5
score: 25.1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 102..188
e-value: 4.8E-8
score: 34.6
NoneNo IPR availablePANTHERPTHR31150:SF6SUBFAMILY NOT NAMEDcoord: 14..189
NoneNo IPR availablePANTHERPTHR31150FAMILY NOT NAMEDcoord: 14..189
NoneNo IPR availableCDDcd16448RING-H2coord: 118..176
e-value: 2.08888E-4
score: 36.2759
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 117..178

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg09951Cla012188Watermelon (97103) v1carwmB0126
Carg09951Csa1G217850Cucumber (Chinese Long) v2carcuB0137
Carg09951MELO3C010287Melon (DHL92) v3.5.1carmeB0131
Carg09951ClCG06G011730Watermelon (Charleston Gray)carwcgB0125
Carg09951CSPI01G16470Wild cucumber (PI 183967)carcpiB0141
Carg09951CmaCh10G005120Cucurbita maxima (Rimu)carcmaB0166
Carg09951CmaCh11G005120Cucurbita maxima (Rimu)carcmaB0169
Carg09951CmoCh10G005480Cucurbita moschata (Rifu)carcmoB0172
Carg09951CmoCh11G005080Cucurbita moschata (Rifu)carcmoB0175
Carg09951Lsi06G010200Bottle gourd (USVL1VR-Ls)carlsiB115
Carg09951Cp4.1LG04g09080Cucurbita pepo (Zucchini)carcpeB0186
Carg09951Cp4.1LG18g05300Cucurbita pepo (Zucchini)carcpeB0185
Carg09951CsGy1G017240Cucumber (Gy14) v2carcgybB0132
Carg09951MELO3C010287.2Melon (DHL92) v3.6.1carmedB0135
Carg09951CsaV3_1G028040Cucumber (Chinese Long) v3carcucB0142
Carg09951Cla97C06G120890Watermelon (97103) v2carwmbB0133
Carg09951Bhi02G000761Wax gourdcarwgoB0165
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg09951Silver-seed gourdcarcarB154
Carg09951Cucurbita maxima (Rimu)carcmaB0165
Carg09951Cucurbita pepo (Zucchini)carcpeB0181
Carg09951Wild cucumber (PI 183967)carcpiB0138
Carg09951Cucumber (Chinese Long) v2carcuB0133
Carg09951Bottle gourd (USVL1VR-Ls)carlsiB118
Carg09951Melon (DHL92) v3.5.1carmeB0133
Carg09951Watermelon (97103) v2carwmbB0132
Carg09951Watermelon (97103) v2carwmbB0136