CsGy1G015140 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G015140
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	transmembrane protein
Location	Chr1 : 11025944 .. 11026630 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACAACACTTAAGTGAAAGCAGCTTGAATCTGAATAATTATGATGTTATATTTAGATCAACATCATCATCCAAGAATTGCAGCAGCAAAGTTGAGTGGTTGAAAAGGATGGTGAAGCTGACTGTGTTTTGTTTGCTTTTAGGGTTGTTTTTTTCTCTCTTCTCTCTATTTCCTCATTCCTTTAGTGTCTATTTTTCAACTTTCCTCTTCTCCATTCTAACCCATGCTGTGGAAAGAAAATACATGTTCTTGATTTGTAATATTGGAATTCTTTTTCTTCTTGCCACTTCCTCTGTTTCTTCTTCTTCCTCTTCTATTGGGAATTATTGTCCATTTCCCCATTCCCGTCATAATCATCATCACAACTTATTTGAACATGATGTTGTGGCCGCTGTTGCCATTGATGAAGAATCTGATTCTGATCACACCCAAGAAGAAGAAGAAGAAAAGGAAGAAGGAATATGTAGAGGTGAATTATTAGAAGAAGAATTAGAAGAAGATGAAGGGTGTTTTACAGATGAGGTTGAAGAAGAAGAAGAAGAAGATCAAAAAGAAGGAAAAAGGAGAGAATTAGAGATAGTGGTGAGCACAGAAGAATTGAACAAGAAAATTGAAGAGTTCATTAGAAAAATGAAGGAGGAAATGAGGATTGAAGCAGCTCAAACTCACCTCATTGCTGTGTAA

mRNA sequence

ATGGAACAACACTTAAGTGAAAGCAGCTTGAATCTGAATAATTATGATGTTATATTTAGATCAACATCATCATCCAAGAATTGCAGCAGCAAAGTTGAGTGGTTGAAAAGGATGGTGAAGCTGACTGTGTTTTGTTTGCTTTTAGGGTTGTTTTTTTCTCTCTTCTCTCTATTTCCTCATTCCTTTAGTGTCTATTTTTCAACTTTCCTCTTCTCCATTCTAACCCATGCTGTGGAAAGAAAATACATGTTCTTGATTTGTAATATTGGAATTCTTTTTCTTCTTGCCACTTCCTCTGTTTCTTCTTCTTCCTCTTCTATTGGGAATTATTGTCCATTTCCCCATTCCCGTCATAATCATCATCACAACTTATTTGAACATGATGTTGTGGCCGCTGTTGCCATTGATGAAGAATCTGATTCTGATCACACCCAAGAAGAAGAAGAAGAAAAGGAAGAAGGAATATGTAGAGGTGAATTATTAGAAGAAGAATTAGAAGAAGATGAAGGGTGTTTTACAGATGAGGTTGAAGAAGAAGAAGAAGAAGATCAAAAAGAAGGAAAAAGGAGAGAATTAGAGATAGTGGTGAGCACAGAAGAATTGAACAAGAAAATTGAAGAGTTCATTAGAAAAATGAAGGAGGAAATGAGGATTGAAGCAGCTCAAACTCACCTCATTGCTGTGTAA

Coding sequence (CDS)

ATGGAACAACACTTAAGTGAAAGCAGCTTGAATCTGAATAATTATGATGTTATATTTAGATCAACATCATCATCCAAGAATTGCAGCAGCAAAGTTGAGTGGTTGAAAAGGATGGTGAAGCTGACTGTGTTTTGTTTGCTTTTAGGGTTGTTTTTTTCTCTCTTCTCTCTATTTCCTCATTCCTTTAGTGTCTATTTTTCAACTTTCCTCTTCTCCATTCTAACCCATGCTGTGGAAAGAAAATACATGTTCTTGATTTGTAATATTGGAATTCTTTTTCTTCTTGCCACTTCCTCTGTTTCTTCTTCTTCCTCTTCTATTGGGAATTATTGTCCATTTCCCCATTCCCGTCATAATCATCATCACAACTTATTTGAACATGATGTTGTGGCCGCTGTTGCCATTGATGAAGAATCTGATTCTGATCACACCCAAGAAGAAGAAGAAGAAAAGGAAGAAGGAATATGTAGAGGTGAATTATTAGAAGAAGAATTAGAAGAAGATGAAGGGTGTTTTACAGATGAGGTTGAAGAAGAAGAAGAAGAAGATCAAAAAGAAGGAAAAAGGAGAGAATTAGAGATAGTGGTGAGCACAGAAGAATTGAACAAGAAAATTGAAGAGTTCATTAGAAAAATGAAGGAGGAAATGAGGATTGAAGCAGCTCAAACTCACCTCATTGCTGTGTAA

Protein sequence

MEQHLSESSLNLNNYDVIFRSTSSSKNCSSKVEWLKRMVKLTVFCLLLGLFFSLFSLFPHSFSVYFSTFLFSILTHAVERKYMFLICNIGILFLLATSSVSSSSSSIGNYCPFPHSRHNHHHNLFEHDVVAAVAIDEESDSDHTQEEEEEKEEGICRGELLEEELEEDEGCFTDEVEEEEEEDQKEGKRRELEIVVSTEELNKKIEEFIRKMKEEMRIEAAQTHLIAV

Homology

[Close]

BLAST of CsGy1G015140 vs. NCBI nr
Match: XP_011648464.1 (PREDICTED: uncharacterized protein LOC105434473 [Cucumis sativus])

HSP 1 Score: 209.5 bits (532), Expect = 1.2e-50
Identity = 180/230 (78.26%), Postives = 181/230 (78.70%), Query Frame = 0


Query: 1   MEQHLSESSLNLNNYDVIFRSTSSSKNCSSKVEWLKRMVKLTVFCLLLGLFFSLFSLFPH 60
           MEQHLSESSLNLNNYDVIFRSTSSSKNCSSKVEWLKRMVKLTVFCLLLGLFFSLFSLFPH
Sbjct: 1   MEQHLSESSLNLNNYDVIFRSTSSSKNCSSKVEWLKRMVKLTVFCLLLGLFFSLFSLFPH 60

Query: 61  SFSVYFSTFLFSILTHAVERKYMFLICNIGILFL--LATSSVXXXXXXIGNYCPFPHXXX 120
           SFSVYFSTFLFSILTHAVERKYMFLICNIGILFL        XXXXXX         XXX
Sbjct: 61  SFSVYFSTFLFSILTHAVERKYMFLICNIGILFLXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICRGEXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ICRG+                   
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGICRGK------------------- 180

Query: 181 XXXXXXXXXXXXELEIVVSTEELNKKIEEFIRKMKEEMRIEAAQTHLIAV 229
                       ELEIVVSTEELNKKIEEFIRKMKEEMRIEAAQTHLIAV
Sbjct: 181 ----------RRELEIVVSTEELNKKIEEFIRKMKEEMRIEAAQTHLIAV 201

[Close]

BLAST of CsGy1G015140 vs. NCBI nr
Match: KGN64999.1 (hypothetical protein Csa_1G173190 [Cucumis sativus])

HSP 1 Score: 178.3 bits (451), Expect = 2.9e-41
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 1  MEQHLSESSLNLNNYDVIFRSTSSSKNCSSKVEWLKRMVKLTVFCLLLGLFFSLFSLFPH 60
          MEQHLSESSLNLNNYDVIFRSTSSSKNCSSKVEWLKRMVKLTVFCLLLGLFFSLFSLFPH
Sbjct: 1  MEQHLSESSLNLNNYDVIFRSTSSSKNCSSKVEWLKRMVKLTVFCLLLGLFFSLFSLFPH 60

Query: 61 SFSVYFSTFLFSILTHAVERKYMFLICNIGILFL 95
          SFSVYFSTFLFSILTHAVERKYMFLICNIGILFL
Sbjct: 61 SFSVYFSTFLFSILTHAVERKYMFLICNIGILFL 94

[Close]

BLAST of CsGy1G015140 vs. NCBI nr
Match: XP_022927104.1 (X-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like [Cucurbita moschata])

HSP 1 Score: 109.4 bits (272), Expect = 1.6e-20
Identity = 155/243 (63.79%), Postives = 172/243 (70.78%), Query Frame = 0


Query: 9   SLNLNNYDVIFRSTSSSKNCSSKVEWLKRMVK----LTVFCLLLGLFFSLFSLFPHSFSV 68
           ++N+++Y+ +    +SS N  + VE LKRMVK    + VF L+L LFFS FSLFPHSF+V
Sbjct: 7   AINMDSYESLDLDRTSSTN--NNVERLKRMVKFIVSICVFSLVLALFFSFFSLFPHSFTV 66

Query: 69  YFSTFLFSILTHAVERKYMFLICNIGILFLLATSSV------------------XXXXXX 128
           YFSTFLFS+L H +ERK+MFLICN GILFLLATSSV                  XXXXXX
Sbjct: 67  YFSTFLFSLLNHGMERKFMFLICN-GILFLLATSSVLQDSXXXXXXXXXXXXXXXXXXXX 126

Query: 129 IGNYCPFPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICRGEXXXXXXX 188
                    X            XXXXXXXXXXXXXXXXXXXXXXXXXX     XXXXXXX
Sbjct: 127 XXXXXXXXXXLVADASDGYDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186

Query: 189 XXXXXXXXXXXXXXXXXXXXXXXXELEIVVSTEELNKKIEEFIRKMKEEMRIEAAQT-HL 229
           XXXXXX    XXXXXXXXXXXXXX+LE+VVSTEELNKKIEEFIRKMKEEMRIEAAQT  L
Sbjct: 187 XXXXXXGCFTXXXXXXXXXXXXXXDLEVVVSTEELNKKIEEFIRKMKEEMRIEAAQTQQL 246

[Close]

BLAST of CsGy1G015140 vs. NCBI nr
Match: PPD91054.1 (hypothetical protein GOBAR_DD12005 [Gossypium barbadense])

HSP 1 Score: 73.9 bits (180), Expect = 7.7e-10
Identity = 69/198 (34.85%), Postives = 83/198 (41.92%), Query Frame = 0


Query: 31  KVEWLKRMVKLTVFCLLLGLFF-----SLFSLFPHSFSVYFSTFLFSILTHAVERKYMFL 90
           K  +L+  +++ V+   L +F        +SLFPHSF+VYFSTFLFS  TH VERKYMF+
Sbjct: 17  KYHFLRNTLQIVVWVSFLSIFLCHSSGMAYSLFPHSFNVYFSTFLFSFFTHTVERKYMFI 76

Query: 91  ICNIGILFLLATSSVXXXXXXIGN-YCPFPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 150
           ICN GIL  +A SSV        N                                    
Sbjct: 77  ICN-GILAFVAKSSVCSRSESDNNGSLALQISTPPTQTKPSVTNDVGAAEYDQHSLVKEE 136

Query: 151 XXXXXXXXXXICRGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELEIVVSTEELNKK 210
                        GE                               EL I +STEELN+K
Sbjct: 137 EESEGSVIVEDADGE-------GYKEREKGWWGKQEERVGGVGAKEELPISMSTEELNRK 196

Query: 211 IEEFIRKMKEEMRIEAAQ 223
           IEEFIRKMKEE+RIEA Q
Sbjct: 197 IEEFIRKMKEEIRIEAQQ 206

[Close]

BLAST of CsGy1G015140 vs. NCBI nr
Match: PPS05009.1 (hypothetical protein GOBAR_AA15660 [Gossypium barbadense])

HSP 1 Score: 71.2 bits (173), Expect = 5.0e-09
Identity = 99/200 (49.50%), Postives = 112/200 (56.00%), Query Frame = 0


Query: 31  KVEWLKRMVKLTVFCLLLGLFF-----SLFSLFPHSFSVYFSTFLFSILTHAVERKYMFL 90
           K  +L+  +++ V+   L +F        +SLFPHSF+VYFSTFLFS  TH VERKYMFL
Sbjct: 17  KYHFLRNTLQIVVWVAFLSVFLCHSSGMAYSLFPHSFNVYFSTFLFSSFTHTVERKYMFL 76

Query: 91  ICNIGILFLLATSSVXXXXXXIGN---YCPFPHXXXXXXXXXXXXXXXXXXXXXXXXXXX 150
           ICN GIL  +A SSV        N                                    
Sbjct: 77  ICN-GILAFVAKSSVCSRSESDNNRYLALEISTPPTQTKPSVTDEVGAAEYDQHVPLDVA 136

Query: 151 XXXXXXXXXXXXICRGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELEIVVSTEELN 210
                      X     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L I +STEELN
Sbjct: 137 EAEETEDAHENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPISMSTEELN 196

Query: 211 KKIEEFIRKMKEEMRIEAAQ 223
           +KIEEFIRKMKEE+RIEA Q
Sbjct: 197 RKIEEFIRKMKEEIRIEAQQ 215

[Close]

BLAST of CsGy1G015140 vs. TAIR10
Match: AT3G13130.1 (unknown protein)

HSP 1 Score: 41.6 bits (96), Expect = 7.7e-04
Identity = 24/36 (66.67%), Postives = 30/36 (83.33%), Query Frame = 0


Query: 194 IVVST-EELNKKIEEFIRKMKEEMRIEAAQTHLIAV 229
           ++ ST EE+NKK +EFIRKMKEE+RIE A+ HLI V
Sbjct: 167 VMTSTEEEMNKKFDEFIRKMKEELRIE-AKRHLILV 201

[Close]

BLAST of CsGy1G015140 vs. TrEMBL
Match: tr|A0A0A0LVQ2|A0A0A0LVQ2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G173190 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.9e-41
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 1  MEQHLSESSLNLNNYDVIFRSTSSSKNCSSKVEWLKRMVKLTVFCLLLGLFFSLFSLFPH 60
          MEQHLSESSLNLNNYDVIFRSTSSSKNCSSKVEWLKRMVKLTVFCLLLGLFFSLFSLFPH
Sbjct: 1  MEQHLSESSLNLNNYDVIFRSTSSSKNCSSKVEWLKRMVKLTVFCLLLGLFFSLFSLFPH 60

Query: 61 SFSVYFSTFLFSILTHAVERKYMFLICNIGILFL 95
          SFSVYFSTFLFSILTHAVERKYMFLICNIGILFL
Sbjct: 61 SFSVYFSTFLFSILTHAVERKYMFLICNIGILFL 94

[Close]

BLAST of CsGy1G015140 vs. TrEMBL
Match: tr|A0A2P5RW76|A0A2P5RW76_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD12005 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 5.1e-10
Identity = 69/198 (34.85%), Postives = 83/198 (41.92%), Query Frame = 0


Query: 31  KVEWLKRMVKLTVFCLLLGLFF-----SLFSLFPHSFSVYFSTFLFSILTHAVERKYMFL 90
           K  +L+  +++ V+   L +F        +SLFPHSF+VYFSTFLFS  TH VERKYMF+
Sbjct: 17  KYHFLRNTLQIVVWVSFLSIFLCHSSGMAYSLFPHSFNVYFSTFLFSFFTHTVERKYMFI 76

Query: 91  ICNIGILFLLATSSVXXXXXXIGN-YCPFPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 150
           ICN GIL  +A SSV        N                                    
Sbjct: 77  ICN-GILAFVAKSSVCSRSESDNNGSLALQISTPPTQTKPSVTNDVGAAEYDQHSLVKEE 136

Query: 151 XXXXXXXXXXICRGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELEIVVSTEELNKK 210
                        GE                               EL I +STEELN+K
Sbjct: 137 EESEGSVIVEDADGE-------GYKEREKGWWGKQEERVGGVGAKEELPISMSTEELNRK 196

Query: 211 IEEFIRKMKEEMRIEAAQ 223
           IEEFIRKMKEE+RIEA Q
Sbjct: 197 IEEFIRKMKEEIRIEAQQ 206

[Close]

BLAST of CsGy1G015140 vs. TrEMBL
Match: tr|A0A2P5XNS8|A0A2P5XNS8_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA15660 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 3.3e-09
Identity = 99/200 (49.50%), Postives = 112/200 (56.00%), Query Frame = 0


Query: 31  KVEWLKRMVKLTVFCLLLGLFF-----SLFSLFPHSFSVYFSTFLFSILTHAVERKYMFL 90
           K  +L+  +++ V+   L +F        +SLFPHSF+VYFSTFLFS  TH VERKYMFL
Sbjct: 17  KYHFLRNTLQIVVWVAFLSVFLCHSSGMAYSLFPHSFNVYFSTFLFSSFTHTVERKYMFL 76

Query: 91  ICNIGILFLLATSSVXXXXXXIGN---YCPFPHXXXXXXXXXXXXXXXXXXXXXXXXXXX 150
           ICN GIL  +A SSV        N                                    
Sbjct: 77  ICN-GILAFVAKSSVCSRSESDNNRYLALEISTPPTQTKPSVTDEVGAAEYDQHVPLDVA 136

Query: 151 XXXXXXXXXXXXICRGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELEIVVSTEELN 210
                      X     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L I +STEELN
Sbjct: 137 EAEETEDAHENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPISMSTEELN 196

Query: 211 KKIEEFIRKMKEEMRIEAAQ 223
           +KIEEFIRKMKEE+RIEA Q
Sbjct: 197 RKIEEFIRKMKEEIRIEAQQ 215

[Close]

BLAST of CsGy1G015140 vs. TrEMBL
Match: tr|A0A061GIF6|A0A061GIF6_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_030414 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 4.3e-09
Identity = 45/70 (64.29%), Postives = 50/70 (71.43%), Query Frame = 0


Query: 34  WLKRMVKLTVFCLLLGLFF---SLFSLFPHSFSVYFSTFLFSILTHAVERKYMFLICNIG 93
           +LKR ++L V   LL  F    S F +FPHSFSVYFSTFLFS  TH +ERKYMFLICN G
Sbjct: 22  FLKRTLQLVVSVALLSFFLCHSSGFFVFPHSFSVYFSTFLFSFFTHTLERKYMFLICN-G 81

Query: 94  ILFLLATSSV 101
           IL  LA SSV
Sbjct: 82  ILAFLAKSSV 90

[Close]

BLAST of CsGy1G015140 vs. TrEMBL
Match: tr|A0A1U8IZG0|A0A1U8IZG0_GOSHI (uncharacterized protein LOC107900145 OS=Gossypium hirsutum OX=3635 GN=LOC107900145 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.1e-08
Identity = 98/226 (43.36%), Postives = 113/226 (50.00%), Query Frame = 0


Query: 31  KVEWLKRMVKLTVFCLLLGLFF-----SLFSLFPHSFSVYFSTFLFSILTHAVERKYMFL 90
           K  +L+  +++ V+   L +F        +SLFPHSF+VYFSTFLFS  TH VERKYMF+
Sbjct: 17  KYHFLRNTLQIVVWVSFLSIFLCHSSGMAYSLFPHSFNVYFSTFLFSFFTHTVERKYMFI 76

Query: 91  ICNIGILFLLATSSVXXXXXXIGN-----------------------------YCPFPHX 150
           ICN GIL  +A SSV        N                             + P    
Sbjct: 77  ICN-GILAFVAKSSVCSRSESDNNGSLALQISTPPTQTKPSVTDDVGAAEYDQHVPLDVA 136

Query: 151 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICRGEXXXXXXXXXXXXXXXXX 210
                     XXXXXXXXXXXXXXXXXXXXXXXXXXXX   GE                 
Sbjct: 137 EAEETEDAYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGE-------GYKEREKGWW 196

Query: 211 XXXXXXXXXXXXXXELEIVVSTEELNKKIEEFIRKMKEEMRIEAAQ 223
                         EL I +STEELN+KIEEFIRKMKEE+RIEA Q
Sbjct: 197 GKQEERVGGVGAKEELPISMSTEELNRKIEEFIRKMKEEIRIEAQQ 234

The following BLAST results are available for this feature:

BLAST of CsGy1G015140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648464.1	1.2e-50	78.26	PREDICTED: uncharacterized protein LOC105434473 [Cucumis sativus]	[more]
KGN64999.1	2.9e-41	100.00	hypothetical protein Csa_1G173190 [Cucumis sativus]	[more]
XP_022927104.1	1.6e-20	63.79	X-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like [Cucur...	[more]
PPD91054.1	7.7e-10	34.85	hypothetical protein GOBAR_DD12005 [Gossypium barbadense]	[more]
PPS05009.1	5.0e-09	49.50	hypothetical protein GOBAR_AA15660 [Gossypium barbadense]	[more]

BLAST of CsGy1G015140 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G13130.1	7.7e-04	66.67	unknown protein	[more]

BLAST of CsGy1G015140 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy1G015140 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LVQ2\|A0A0A0LVQ2_CUCSA	1.9e-41	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G173190 PE=4 SV=1	[more]
tr\|A0A2P5RW76\|A0A2P5RW76_GOSBA	5.1e-10	34.85	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD12005 PE=4 SV...	[more]
tr\|A0A2P5XNS8\|A0A2P5XNS8_GOSBA	3.3e-09	49.50	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA15660 PE=4 SV...	[more]
tr\|A0A061GIF6\|A0A061GIF6_THECC	4.3e-09	64.29	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_030414 PE=4 SV=1	[more]
tr\|A0A1U8IZG0\|A0A1U8IZG0_GOSHI	2.1e-08	43.36	uncharacterized protein LOC107900145 OS=Gossypium hirsutum OX=3635 GN=LOC1079001...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G015140.1	CsGy1G015140.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 198..218
None	No IPR available	COILS	Coil	Coil	coord: 162..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..191
None	No IPR available	PANTHER	PTHR34947:SF3	SUBFAMILY NOT NAMED	coord: 32..228
None	No IPR available	PANTHER	PTHR34947	FAMILY NOT NAMED	coord: 32..228

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G015140	Cla010971	Watermelon (97103) v1	cgybwmB043
CsGy1G015140	Csa1G173190	Cucumber (Chinese Long) v2	cgybcuB001
CsGy1G015140	MELO3C026071	Melon (DHL92) v3.5.1	cgybmeB016
CsGy1G015140	ClCG01G010940	Watermelon (Charleston Gray)	cgybwcgB021
CsGy1G015140	CSPI01G15380	Wild cucumber (PI 183967)	cgybcpiB001
CsGy1G015140	Lsi02G011600	Bottle gourd (USVL1VR-Ls)	cgyblsiB023
CsGy1G015140	MELO3C026071.2	Melon (DHL92) v3.6.1	cgybmedB015
CsGy1G015140	CsaV3_1G015540	Cucumber (Chinese Long) v3	cgybcucB002
CsGy1G015140	Cla97C01G010660	Watermelon (97103) v2	cgybwmbB009

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G015140	Cucumber (Gy14) v2	cgybcgybB036
CsGy1G015140	Cucurbita maxima (Rimu)	cgybcmaB068
CsGy1G015140	Cucurbita maxima (Rimu)	cgybcmaB071
CsGy1G015140	Cucurbita maxima (Rimu)	cgybcmaB089
CsGy1G015140	Cucurbita maxima (Rimu)	cgybcmaB095
CsGy1G015140	Cucurbita maxima (Rimu)	cgybcmaB128
CsGy1G015140	Cucurbita moschata (Rifu)	cgybcmoB084
CsGy1G015140	Cucurbita moschata (Rifu)	cgybcmoB118
CsGy1G015140	Cucurbita pepo (Zucchini)	cgybcpeB007
CsGy1G015140	Cucurbita pepo (Zucchini)	cgybcpeB024
CsGy1G015140	Cucumber (Chinese Long) v2	cgybcuB041
CsGy1G015140	Cucumber (Chinese Long) v2	cgybcuB045
CsGy1G015140	Bottle gourd (USVL1VR-Ls)	cgyblsiB014
CsGy1G015140	Bottle gourd (USVL1VR-Ls)	cgyblsiB016
CsGy1G015140	Bottle gourd (USVL1VR-Ls)	cgyblsiB029
CsGy1G015140	Bottle gourd (USVL1VR-Ls)	cgyblsiB038
CsGy1G015140	Melon (DHL92) v3.5.1	cgybmeB029
CsGy1G015140	Melon (DHL92) v3.6.1	cgybmedB022
CsGy1G015140	Watermelon (Charleston Gray)	cgybwcgB018
CsGy1G015140	Watermelon (Charleston Gray)	cgybwcgB019
CsGy1G015140	Watermelon (Charleston Gray)	cgybwcgB026
CsGy1G015140	Watermelon (97103) v1	cgybwmB048
CsGy1G015140	Watermelon (97103) v1	cgybwmB059
CsGy1G015140	Watermelon (97103) v1	cgybwmB061
CsGy1G015140	Wild cucumber (PI 183967)	cgybcpiB038
CsGy1G015140	Wild cucumber (PI 183967)	cgybcpiB042
CsGy1G015140	Silver-seed gourd	carcgybB0049
CsGy1G015140	Silver-seed gourd	carcgybB0051
CsGy1G015140	Silver-seed gourd	carcgybB0408
CsGy1G015140	Cucumber (Chinese Long) v3	cgybcucB046
CsGy1G015140	Watermelon (97103) v2	cgybwmbB006
CsGy1G015140	Watermelon (97103) v2	cgybwmbB008
CsGy1G015140	Wax gourd	cgybwgoB032
CsGy1G015140	Wax gourd	cgybwgoB042