CSPI01G15380 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACAACACTTAAGTGAAAGCAGCTTGAATCTGAATAATTATGATGTTATATTTAGATCAACATCATCATCCAAGAATTGCAGCAGCAAAGTTGAGTGGTTGAAAAGGATGGTGAAGCTGACTGTGTTTTGTTTGCTTTTAGGGTTGTTTTTTTCTCTCTTCTCTCTATTTCCTCATTCCTTTAGTGTCTATTTTTCAACTTTCCTCTTCTCCATTCTAACCCATGCTGTGGAAAGAAAATACATGTTCTTGATTTGTAATATTGGAATTCTTTTTCTTCTTGCCACTTCCTCTGTTTCTTCTTCTTCCTCTTCCTCTTCTTTTGGGAATTATTGTCCATTTCCCCATTCCCGTCATAATCATCATCACAACTTATTTGAACATGATGTTGTGGCCGCTGTTGCCATTGATGAAGAATCTGATTCTGATCACACCCAAGAAGAAGAAGAAGAAAAGGAAGAAGGAATATGTAGAGGTGAATTATTAGAAGAAGAATTAGAAGAAGATGAAGGGTGTTTTACAGATGAGGTTGAAGAAGAAGAAGAAGAAGAAGATCAAAAAGAAGGAAAAAGGAGAGAATTAGAGATAGTGGTGAGCACAGAAGAATTGAACAAGAAAATTGAAGAGTTCATTAGAAAAATGAAGGAGGAAATGAGGATTGAAGCAGCTCAAACTCACCTCATTGCTGTGTAA ATGGAACAACACTTAAGTGAAAGCAGCTTGAATCTGAATAATTATGATGTTATATTTAGATCAACATCATCATCCAAGAATTGCAGCAGCAAAGTTGAGTGGTTGAAAAGGATGGTGAAGCTGACTGTGTTTTGTTTGCTTTTAGGGTTGTTTTTTTCTCTCTTCTCTCTATTTCCTCATTCCTTTAGTGTCTATTTTTCAACTTTCCTCTTCTCCATTCTAACCCATGCTGTGGAAAGAAAATACATGTTCTTGATTTGTAATATTGGAATTCTTTTTCTTCTTGCCACTTCCTCTGTTTCTTCTTCTTCCTCTTCCTCTTCTTTTGGGAATTATTGTCCATTTCCCCATTCCCGTCATAATCATCATCACAACTTATTTGAACATGATGTTGTGGCCGCTGTTGCCATTGATGAAGAATCTGATTCTGATCACACCCAAGAAGAAGAAGAAGAAAAGGAAGAAGGAATATGTAGAGGTGAATTATTAGAAGAAGAATTAGAAGAAGATGAAGGGTGTTTTACAGATGAGGTTGAAGAAGAAGAAGAAGAAGAAGATCAAAAAGAAGGAAAAAGGAGAGAATTAGAGATAGTGGTGAGCACAGAAGAATTGAACAAGAAAATTGAAGAGTTCATTAGAAAAATGAAGGAGGAAATGAGGATTGAAGCAGCTCAAACTCACCTCATTGCTGTGTAA ATGGAACAACACTTAAGTGAAAGCAGCTTGAATCTGAATAATTATGATGTTATATTTAGATCAACATCATCATCCAAGAATTGCAGCAGCAAAGTTGAGTGGTTGAAAAGGATGGTGAAGCTGACTGTGTTTTGTTTGCTTTTAGGGTTGTTTTTTTCTCTCTTCTCTCTATTTCCTCATTCCTTTAGTGTCTATTTTTCAACTTTCCTCTTCTCCATTCTAACCCATGCTGTGGAAAGAAAATACATGTTCTTGATTTGTAATATTGGAATTCTTTTTCTTCTTGCCACTTCCTCTGTTTCTTCTTCTTCCTCTTCCTCTTCTTTTGGGAATTATTGTCCATTTCCCCATTCCCGTCATAATCATCATCACAACTTATTTGAACATGATGTTGTGGCCGCTGTTGCCATTGATGAAGAATCTGATTCTGATCACACCCAAGAAGAAGAAGAAGAAAAGGAAGAAGGAATATGTAGAGGTGAATTATTAGAAGAAGAATTAGAAGAAGATGAAGGGTGTTTTACAGATGAGGTTGAAGAAGAAGAAGAAGAAGAAGATCAAAAAGAAGGAAAAAGGAGAGAATTAGAGATAGTGGTGAGCACAGAAGAATTGAACAAGAAAATTGAAGAGTTCATTAGAAAAATGAAGGAGGAAATGAGGATTGAAGCAGCTCAAACTCACCTCATTGCTGTGTAA
BLAST of CSPI01G15380 vs. TrEMBL
Match: A0A0A0LVQ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G173190 PE=4 SV=1) HSP 1 Score: 341.7 bits (875), Expect = 7.2e-91 Identity = 191/210 (90.95%), Postives = 198/210 (94.29%), Query Frame = 1
BLAST of CSPI01G15380 vs. TrEMBL
Match: B9SA78_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0863250 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 4.8e-18 Identity = 92/206 (44.66%), Postives = 129/206 (62.62%), Query Frame = 1
BLAST of CSPI01G15380 vs. TrEMBL
Match: A0A0D2VCB4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G189400 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.3e-15 Identity = 91/222 (40.99%), Postives = 125/222 (56.31%), Query Frame = 1
BLAST of CSPI01G15380 vs. TrEMBL
Match: A0A061GIF6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_030414 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 2.9e-15 Identity = 100/227 (44.05%), Postives = 127/227 (55.95%), Query Frame = 1
BLAST of CSPI01G15380 vs. TrEMBL
Match: B9IH27_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s00910g PE=4 SV=2) HSP 1 Score: 81.3 bits (199), Expect = 1.8e-12 Identity = 87/204 (42.65%), Postives = 112/204 (54.90%), Query Frame = 1
BLAST of CSPI01G15380 vs. TAIR10
Match: AT3G13130.1 (AT3G13130.1 unknown protein) HSP 1 Score: 52.8 bits (125), Expect = 3.4e-07 Identity = 68/218 (31.19%), Postives = 108/218 (49.54%), Query Frame = 1
BLAST of CSPI01G15380 vs. NCBI nr
Match: gi|778665009|ref|XP_011648464.1| (PREDICTED: uncharacterized protein LOC105434473 [Cucumis sativus]) HSP 1 Score: 356.3 bits (913), Expect = 4.1e-95 Identity = 200/231 (86.58%), Postives = 200/231 (86.58%), Query Frame = 1
BLAST of CSPI01G15380 vs. NCBI nr
Match: gi|700209903|gb|KGN64999.1| (hypothetical protein Csa_1G173190 [Cucumis sativus]) HSP 1 Score: 341.7 bits (875), Expect = 1.0e-90 Identity = 191/210 (90.95%), Postives = 198/210 (94.29%), Query Frame = 1
BLAST of CSPI01G15380 vs. NCBI nr
Match: gi|1009107325|ref|XP_015879154.1| (PREDICTED: glutamic acid-rich protein-like [Ziziphus jujuba]) HSP 1 Score: 102.4 bits (254), Expect = 1.1e-18 Identity = 99/240 (41.25%), Postives = 139/240 (57.92%), Query Frame = 1
BLAST of CSPI01G15380 vs. NCBI nr
Match: gi|255563792|ref|XP_002522897.1| (PREDICTED: cyclic nucleotide-gated cation channel beta-1 [Ricinus communis]) HSP 1 Score: 99.8 bits (247), Expect = 6.8e-18 Identity = 92/206 (44.66%), Postives = 129/206 (62.62%), Query Frame = 1
BLAST of CSPI01G15380 vs. NCBI nr
Match: gi|823232304|ref|XP_012448867.1| (PREDICTED: uncharacterized protein LOC105772072 [Gossypium raimondii]) HSP 1 Score: 91.7 bits (226), Expect = 1.9e-15 Identity = 91/222 (40.99%), Postives = 125/222 (56.31%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |