CsGy1G007150 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G007150
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Location	Chr1 : 4558690 .. 4560063 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAAAGAAGATTTGGTTTCCATGTTAACGTGTGTCTTGCGATATTGGTTCGATTCAATCAAATGACTATATATATATCTTAGTTGCTCATGTCTAAGTTAGAGTAGTTTTGCTTGAGCCGTGCTATAACCTATACCGTGTGAAAGTTGATCTTATATTTGATTTATTGTAAATTTACTCAATTGTTTTATAAGGATGAAAATGAAAGAACACACACAACCAGCTGGGCTTATTGACAATTTGGAAGAATTTCGAGAGATTATACATAAAATTCATAGTAATGAATCACTGCGATGAGCGGAAAATCTGTAACTGCCGCGCGAAATGGTTGAAGCAATGGCGAGAAAGAAGGCGTAGCCGCGTACGTGTTCTTAATCCAATGAAAATTACCCTATAAGTTTTCCCACTCCATTGCTCTCAAGCCTAATAACTATTCCCAATTTCTGCTTTCAGAAAATCAATATCAGATTTTCAACAATACAATAATAATGGCGGCGCGGACAATATTATTCTTCGCCGTCCTAACTCTCTTGATTGTTTCTTCTGTCGGATTTTCTGAAGAACTTGACGGGTTTTTCAAAGGAATGGATGAGGCTACAAAAATTCCACAGTGTATGCAGAAGATTCTTCCATGTCAACCGTTCTTCAAATTGCCGGAAATTCCGTCGTCGATATGTTGTTTGCCGTTGAAGGAGATGCTGGTCGGCGATCTTCAGTGTTTTTGCTCCTTCTTCAACGATTCGGAAATGTTGAAGGTTTTGAATGCTACCCAGAGCCAAGTGTTGAATCTTCCCAAGGCTTGCGGTGCCGACGATGCTGATATTTCTGCATGTGACAATGGTGAATTTCAATTTCTCATAAATTTAATTAATAATTCTTGAGTTATCACCTTCGTAATCATTCTGTTTTTCCCTCGAATAATTTTCAGACGCCCAGCCACCGACCGGTTCAACGGATGCGCCTCCGTCGCCACCCGCTAAAACTGCCGATGGTAATTAATTTCTGTGTGATTTTGTTTTTTCAAACGGACCCTTTGATTATAATCCCTCTCTCCAAGATTTGTTGATTACAGATTTGTAAATTTTGAATTCAGGTTCTAAAGCTAACAGCTCAAGAAGGAATTATAACAATCCAAGCAACATCATTGGTTATGGCTTTGCAGCTGCTTCATCATTTGTGGCTTTGCTGCTTTCACCATTATTATAAGCACTTTCCTTTTGATTTCAATCCAAATCCTCATTTTTCCCTTCCTTTGAAGCAAACTAACCAAATACTTTTTGTAAGCAAGTCCGAGTTTTTTTATGTAAGAGAAGTTTTCACGTTGATATATCTGATTCATTTTTTGGTTTCTATTGTTCTTTCCTTTGTACACGA

mRNA sequence

CTAAAAGAAGATTTGGTTTCCATGTTAACGTGTGTCTTGCGATATTGGTTCGATTCAATCAAATGACTATATATATATCTTAGTTGCTCATGTCTAAGTTAGAGTAGTTTTGCTTGAGCCGTGCTATAACCTATACCGTGTGAAAGTTGATCTTATATTTGATTTATTGTAAATTTACTCAATTGTTTTATAAGGATGAAAATGAAAGAACACACACAACCAGCTGGGCTTATTGACAATTTGGAAGAATTTCGAGAGATTATACATAAAATTCATAGTAATGAATCACTGCGATGAGCGGAAAATCTGTAACTGCCGCGCGAAATGGTTGAAGCAATGGCGAGAAAGAAGGCGTAGCCGCGTACGTGTTCTTAATCCAATGAAAATTACCCTATAAGTTTTCCCACTCCATTGCTCTCAAGCCTAATAACTATTCCCAATTTCTGCTTTCAGAAAATCAATATCAGATTTTCAACAATACAATAATAATGGCGGCGCGGACAATATTATTCTTCGCCGTCCTAACTCTCTTGATTGTTTCTTCTGTCGGATTTTCTGAAGAACTTGACGGGTTTTTCAAAGGAATGGATGAGGCTACAAAAATTCCACAGTGTATGCAGAAGATTCTTCCATGTCAACCGTTCTTCAAATTGCCGGAAATTCCGTCGTCGATATGTTGTTTGCCGTTGAAGGAGATGCTGGTCGGCGATCTTCAGTGTTTTTGCTCCTTCTTCAACGATTCGGAAATGTTGAAGGTTTTGAATGCTACCCAGAGCCAAGTGTTGAATCTTCCCAAGGCTTGCGGTGCCGACGATGCTGATATTTCTGCATGTGACAATGACGCCCAGCCACCGACCGGTTCAACGGATGCGCCTCCGTCGCCACCCGCTAAAACTGCCGATGGTTCTAAAGCTAACAGCTCAAGAAGGAATTATAACAATCCAAGCAACATCATTGGTTATGGCTTTGCAGCTGCTTCATCATTTGTGGCTTTGCTGCTTTCACCATTATTATAAGCACTTTCCTTTTGATTTCAATCCAAATCCTCATTTTTCCCTTCCTTTGAAGCAAACTAACCAAATACTTTTTGTAAGCAAGTCCGAGTTTTTTTATGTAAGAGAAGTTTTCACGTTGATATATCTGATTCATTTTTTGGTTTCTATTGTTCTTTCCTTTGTACACGA

Coding sequence (CDS)

ATGGCGGCGCGGACAATATTATTCTTCGCCGTCCTAACTCTCTTGATTGTTTCTTCTGTCGGATTTTCTGAAGAACTTGACGGGTTTTTCAAAGGAATGGATGAGGCTACAAAAATTCCACAGTGTATGCAGAAGATTCTTCCATGTCAACCGTTCTTCAAATTGCCGGAAATTCCGTCGTCGATATGTTGTTTGCCGTTGAAGGAGATGCTGGTCGGCGATCTTCAGTGTTTTTGCTCCTTCTTCAACGATTCGGAAATGTTGAAGGTTTTGAATGCTACCCAGAGCCAAGTGTTGAATCTTCCCAAGGCTTGCGGTGCCGACGATGCTGATATTTCTGCATGTGACAATGACGCCCAGCCACCGACCGGTTCAACGGATGCGCCTCCGTCGCCACCCGCTAAAACTGCCGATGGTTCTAAAGCTAACAGCTCAAGAAGGAATTATAACAATCCAAGCAACATCATTGGTTATGGCTTTGCAGCTGCTTCATCATTTGTGGCTTTGCTGCTTTCACCATTATTATAA

Protein sequence

MAARTILFFAVLTLLIVSSVGFSEELDGFFKGMDEATKIPQCMQKILPCQPFFKLPEIPSSICCLPLKEMLVGDLQCFCSFFNDSEMLKVLNATQSQVLNLPKACGADDADISACDNDAQPPTGSTDAPPSPPAKTADGSKANSSRRNYNNPSNIIGYGFAAASSFVALLLSPLL

Homology

[Close]

BLAST of CsGy1G007150 vs. NCBI nr
Match: XP_011650886.1 (PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Cucumis sativus] >KGN64183.1 hypothetical protein Csa_1G042900 [Cucumis sativus])

HSP 1 Score: 342.8 bits (878), Expect = 6.8e-91
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MAARTILFFAVLTLLIVSSVGFSEELDGFFKGMDEATKIPQCMQKILPCQPFFKLPEIPS 60
           MAARTILFFAVLTLLIVSSVGFSEELDGFFKGMDEATKIPQCMQKILPCQPFFKLPEIPS
Sbjct: 1   MAARTILFFAVLTLLIVSSVGFSEELDGFFKGMDEATKIPQCMQKILPCQPFFKLPEIPS 60

Query: 61  SICCLPLKEMLVGDLQCFCSFFNDSEMLKVLNATQSQVLNLPKACGADDADISACDNDAQ 120
           SICCLPLKEMLVGDLQCFCSFFNDSEMLKVLNATQSQVLNLPKACGADDADISACDNDAQ
Sbjct: 61  SICCLPLKEMLVGDLQCFCSFFNDSEMLKVLNATQSQVLNLPKACGADDADISACDNDAQ 120

Query: 121 PPTGSTDAPPSPPAKTADGSKANSSRRNYNNPSNIIGYGFAAASSFVALLLSPLL 176
           PPTGSTDAPPSPPAKTADGSKANSSRRNYNNPSNIIGYGFAAASSFVALLLSPLL
Sbjct: 121 PPTGSTDAPPSPPAKTADGSKANSSRRNYNNPSNIIGYGFAAASSFVALLLSPLL 175

[Close]

BLAST of CsGy1G007150 vs. NCBI nr
Match: XP_008465997.1 (PREDICTED: lipid transfer-like protein VAS [Cucumis melo])

HSP 1 Score: 193.7 bits (491), Expect = 5.1e-46
Identity = 111/175 (63.43%), Postives = 121/175 (69.14%), Query Frame = 0


Query: 1   MAARTILFFAVLTLLIVSSVGFSEELDGFFKGMDEATKIPQCMQKILPCQPFFKLPEIPS 60
           MA+RT+LFFA L LL+ SSVGFS++LD FFKGM E+ KIPQCMQKILPCQPF KLPE PS
Sbjct: 1   MASRTMLFFAFLILLMFSSVGFSQDLDAFFKGM-ESGKIPQCMQKILPCQPFIKLPENPS 60

Query: 61  SICCLPLKEMLVGDLQCFCSFFNDSEMLKVLNATQSQVLNLPKACGADDADISACDNDAQ 120
           ++CCLPLKEMLVGD+QC CSFFND +MLK LN TQSQ L LPKACGA D DISAC     
Sbjct: 61  AMCCLPLKEMLVGDVQCLCSFFNDVDMLKALNVTQSQALKLPKACGAADVDISACG---- 120

Query: 121 PPTGSTDAPPSPPAKTADGSKANSSRRNYNNPSNIIGYGFAAASSFVALLLSPLL 176
           P                               S  IGYGFAAASSFVALLLSPLL
Sbjct: 121 PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKGIGYGFAAASSFVALLLSPLL 170

[Close]

BLAST of CsGy1G007150 vs. NCBI nr
Match: XP_023520350.1 (protein YLS3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 143.7 bits (361), Expect = 6.1e-31
Identity = 88/176 (50.00%), Postives = 114/176 (64.77%), Query Frame = 0


Query: 8   FFAVLTLLIVSS---VGFSEELDGFFKGMDEAT--KIPQCMQKILPCQPFFKLPEIPSSI 67
           FFA   LL++SS   VGFS++L  F KG +     K+P CM+++L CQP+ K PE P   
Sbjct: 6   FFAF--LLLISSQMFVGFSQDLSEFLKGTESILDGKLPPCMRQMLTCQPYIKSPENPPPA 65

Query: 68  CCLPLKEMLVGDLQCFCSFFNDSEMLKVLNATQSQVLNLPKACGADDADISACDNDAQPP 127
           CC PLKE+L  DL C CSFFN+ +MLK LN +QS+ L LPK CGA + DIS C +DA+ P
Sbjct: 66  CCTPLKELLDSDLPCLCSFFNNEKMLKTLNVSQSRALELPKNCGA-ELDISGC-SDAESP 125

Query: 128 TGSTDAPPS------PPAKTADGSKANSSRRNYNNPSNIIGYGFAAASSFVALLLS 173
           TGST+ P S      P A T+  + +++     NNP+   G+G AAASS VALLLS
Sbjct: 126 TGSTEGPSSSTTPLTPTANTSGLNDSSTGGATRNNPTYGFGHGVAAASSVVALLLS 177

[Close]

BLAST of CsGy1G007150 vs. NCBI nr
Match: XP_023001811.1 (protein YLS3-like [Cucurbita maxima])

HSP 1 Score: 125.2 bits (313), Expect = 2.2e-25
Identity = 81/175 (46.29%), Postives = 104/175 (59.43%), Query Frame = 0


Query: 8   FFAVLTLLIVSS---VGFSEELDGFFKGMDEA--TKIPQCMQKILPCQPFFKLPEIPSSI 67
           FFA   LL++SS   VGFS++L  F KG +     ++P CM+++L CQP+ K PE P + 
Sbjct: 6   FFAF--LLLISSQMFVGFSQDLSEFLKGTESILDRQLPPCMRQMLSCQPYIKSPENPPTA 65

Query: 68  CCLPLKEMLVGDLQCFCSFFNDSEMLKVLNATQSQVLNLPKACGADDADISACDNDAQPP 127
           CC PLKE+L  DL C CSFFN+ +ML  LN +QS+ L LPK CGA + DIS C + A+ P
Sbjct: 66  CCTPLKELLNSDLPCLCSFFNNEKMLNTLNVSQSRALELPKNCGA-ELDISGCSH-AESP 125

Query: 128 TGSTDAPPS-----PPAKTADGSKANSSRRNYNNPSNIIGYGFAAASSFVALLLS 173
           TGST+ P S                         P+  IG+G AAASS VALLLS
Sbjct: 126 TGSTEGPSSXXXXXXXXXXXXXXXXXXXXXXXXXPTYGIGHGVAAASSVVALLLS 176

[Close]

BLAST of CsGy1G007150 vs. NCBI nr
Match: XP_022924146.1 (protein YLS3-like [Cucurbita moschata])

HSP 1 Score: 121.3 bits (303), Expect = 3.2e-24
Identity = 78/173 (45.09%), Postives = 100/173 (57.80%), Query Frame = 0


Query: 11  VLTLLIVSS---VGFSEELDGFFKGMDEAT--KIPQCMQKILPCQPFFKLPEIPSSICCL 70
           V  LL++SS   VGFS++L  F KG +      +P CM+++L CQP+ K PE P   CC 
Sbjct: 7   VAFLLLISSQMFVGFSQDLSEFLKGTESILDGNLPPCMRQMLSCQPYIKSPENPPPACCT 66

Query: 71  PLKEMLVGDLQCFCSFFNDSEMLKVLNATQSQVLNLPKACGADDADISACDNDAQPPTG- 130
           PLKE+L  D+ C CSFF++ +MLK LN +QS+ L LPK CGA D DIS C +DA+ PTG 
Sbjct: 67  PLKELLDSDVPCLCSFFSNEKMLKTLNVSQSRALELPKNCGA-DLDISGC-SDAESPTGX 126

Query: 131 -----STDAPPSPPAKTADGSKANSSRRNYNNPSNIIGYGFAAASSFVALLLS 173
                                   +     NNP+  IG+G AAASS VALLLS
Sbjct: 127 XXXXXXXXXXXXXXXXXXXXXXXXTGGATRNNPTYGIGHGVAAASSVVALLLS 177

[Close]

BLAST of CsGy1G007150 vs. TAIR10
Match: AT1G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 87.8 bits (216), Expect = 7.2e-18
Identity = 44/97 (45.36%), Postives = 62/97 (63.92%), Query Frame = 0


Query: 35  EATKIPQCMQKILPCQPFFKLPEIPSSICCLPLKEMLVGDLQCFCSFFNDSEMLKVLNAT 94
           +A  +P C+QK++PCQP+  L   P + CC+PL E++  D  C C+ FN+ +MLK LN T
Sbjct: 35  DAHSLP-CIQKLMPCQPYLHLATPPPATCCMPLNEIVAKDATCLCAVFNNVDMLKSLNLT 94

Query: 95  QSQVLNLPKACGADDADISACDNDAQPPTGSTDAPPS 132
           +   L+LPKACGA  AD+S C   A   T S+  PP+
Sbjct: 95  KENALDLPKACGA-KADVSLCKTSA--GTNSSSTPPA 127

[Close]

BLAST of CsGy1G007150 vs. TAIR10
Match: AT1G73560.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 64.3 bits (155), Expect = 8.5e-11
Identity = 46/134 (34.33%), Postives = 67/134 (50.00%), Query Frame = 0


Query: 38  KIPQCMQKILPCQPFF-KLPEIPSSICCLPLKEMLVGDLQCFCSFFNDSEMLKVLNATQS 97
           ++  C+QK+LPCQP+   L          P+KE++  D  C C  FN+ E+LK LN T+ 
Sbjct: 29  QLTACLQKLLPCQPYIHSLNPXXXXXXXGPMKEIVEKDAPCLCIAFNNPEVLKALNLTKE 88

Query: 98  QVLNLPKACGADDADISACDNDAQPPTGSTDAPPSPPAKTADGSKANSSRRNYNNPSNII 157
             L LPKACG  + D+S C   A P      +P + P  T   S A++   N        
Sbjct: 89  NALLLPKACGV-NPDVSLCSKIATP------SPIASPGSTNGTSSASTISFN-------- 145

Query: 158 GYGFAAASSFVALL 171
              F+  S+FVA++
Sbjct: 149 --RFSFLSAFVAMI 145

[Close]

BLAST of CsGy1G007150 vs. TAIR10
Match: AT1G73550.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 60.1 bits (144), Expect = 1.6e-09
Identity = 43/157 (27.39%), Postives = 74/157 (47.13%), Query Frame = 0


Query: 5   TILFFAVLTLLIVSSVGFSEELDGFFKGMDEATKIPQCMQKILPCQPFFKLPEIPSSICC 64
           T +   V T++I+ SV  + +   FF  + +A +   C+ K++PCQP+  L   P  +CC
Sbjct: 4   TRILGVVTTVVILYSVQVTAQ---FFGDVQQAMR---CVAKLMPCQPYIHLSIPPPPLCC 63

Query: 65  LPLKEMLVGDLQCFCSFFNDSEMLKVLNATQSQVLNLPKACGADDADISACDNDAQPPTG 124
            P+K++   D+ C C+ F   ++L+ L  T+   + +  +CG +  D S C+        
Sbjct: 64  NPMKQIAEKDVSCLCTAFKHPDLLRFLALTKENAIKILDSCGINH-DPSVCNK------- 123

Query: 125 STDAPPSPPAKTADGSKANSSRRNYNNPSNIIGYGFA 162
               P SP A     +  NS     N    I  +GF+
Sbjct: 124 --TNPSSPAALPEAATSGNSFSTKKNTALAITFFGFS 144

[Close]

BLAST of CsGy1G007150 vs. TAIR10
Match: AT1G62790.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 50.4 bits (119), Expect = 1.3e-06
Identity = 29/109 (26.61%), Postives = 47/109 (43.12%), Query Frame = 0


Query: 41  QCMQKILPCQPFFKLPEIPSSICCLPLKEMLVGDLQCFCSFFNDSEMLKVLNATQSQVLN 100
           +C+ K++PC         P   CC  +KE +  +L C C+ +    +L   N T  + L 
Sbjct: 28  ECVSKLVPCFNDLNTTTTPVKECCDSIKEAVEKELTCLCTIYTSPGLLAQFNVTTEKALG 87

Query: 101 LPKACGADDADISACDNDAQPPTGSTDAPPSPPAKTADGSKANSSRRNY 150
           L + C     D+SAC     P   ++  PP+P   T   + A +    Y
Sbjct: 88  LSRRCNV-TTDLSACTAKGAPSPKASLPPPAPAGNTKKDAGAGNKLAGY 135

[Close]

BLAST of CsGy1G007150 vs. TrEMBL
Match: tr|A0A0A0LQX5|A0A0A0LQX5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042900 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 4.5e-91
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MAARTILFFAVLTLLIVSSVGFSEELDGFFKGMDEATKIPQCMQKILPCQPFFKLPEIPS 60
           MAARTILFFAVLTLLIVSSVGFSEELDGFFKGMDEATKIPQCMQKILPCQPFFKLPEIPS
Sbjct: 1   MAARTILFFAVLTLLIVSSVGFSEELDGFFKGMDEATKIPQCMQKILPCQPFFKLPEIPS 60

Query: 61  SICCLPLKEMLVGDLQCFCSFFNDSEMLKVLNATQSQVLNLPKACGADDADISACDNDAQ 120
           SICCLPLKEMLVGDLQCFCSFFNDSEMLKVLNATQSQVLNLPKACGADDADISACDNDAQ
Sbjct: 61  SICCLPLKEMLVGDLQCFCSFFNDSEMLKVLNATQSQVLNLPKACGADDADISACDNDAQ 120

Query: 121 PPTGSTDAPPSPPAKTADGSKANSSRRNYNNPSNIIGYGFAAASSFVALLLSPLL 176
           PPTGSTDAPPSPPAKTADGSKANSSRRNYNNPSNIIGYGFAAASSFVALLLSPLL
Sbjct: 121 PPTGSTDAPPSPPAKTADGSKANSSRRNYNNPSNIIGYGFAAASSFVALLLSPLL 175

[Close]

BLAST of CsGy1G007150 vs. TrEMBL
Match: tr|A0A1S3CQ75|A0A1S3CQ75_CUCME (lipid transfer-like protein VAS OS=Cucumis melo OX=3656 GN=LOC103503471 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.4e-46
Identity = 111/175 (63.43%), Postives = 121/175 (69.14%), Query Frame = 0


Query: 1   MAARTILFFAVLTLLIVSSVGFSEELDGFFKGMDEATKIPQCMQKILPCQPFFKLPEIPS 60
           MA+RT+LFFA L LL+ SSVGFS++LD FFKGM E+ KIPQCMQKILPCQPF KLPE PS
Sbjct: 1   MASRTMLFFAFLILLMFSSVGFSQDLDAFFKGM-ESGKIPQCMQKILPCQPFIKLPENPS 60

Query: 61  SICCLPLKEMLVGDLQCFCSFFNDSEMLKVLNATQSQVLNLPKACGADDADISACDNDAQ 120
           ++CCLPLKEMLVGD+QC CSFFND +MLK LN TQSQ L LPKACGA D DISAC     
Sbjct: 61  AMCCLPLKEMLVGDVQCLCSFFNDVDMLKALNVTQSQALKLPKACGAADVDISACG---- 120

Query: 121 PPTGSTDAPPSPPAKTADGSKANSSRRNYNNPSNIIGYGFAAASSFVALLLSPLL 176
           P                               S  IGYGFAAASSFVALLLSPLL
Sbjct: 121 PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKGIGYGFAAASSFVALLLSPLL 170

[Close]

BLAST of CsGy1G007150 vs. TrEMBL
Match: tr|A0A2P6P1S4|A0A2P6P1S4_ROSCH (Putative bifunctional inhibitor/plant lipid transfer protein/seed storage helical OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0178151 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.3e-18
Identity = 74/176 (42.05%), Postives = 101/176 (57.39%), Query Frame = 0


Query: 3   ARTILFFAVLTL--LIVSSVGFS-EELDGFFKG---MDEATKIPQCMQKILPCQPFFKLP 62
           A   LF  VL L  L+ S+  FS   L G   G    D +  +P C++K++PCQP+   P
Sbjct: 2   ASKCLFLMVLGLVGLVGSAAEFSGGGLAGLVHGGGDGDPSDSMP-CVKKLIPCQPYLHAP 61

Query: 63  EIPSSICCLPLKEMLVGDLQCFCSFFNDSEMLKVLNATQSQVLNLPKACGADDADISACD 122
           E     CCLPLK+M+  D +C C  FN+ +MLK LN TQ + L LPKACGA +ADIS C 
Sbjct: 62  EKVPVSCCLPLKQMVSDDKKCLCGLFNNVDMLKKLNVTQDEALKLPKACGA-NADISICK 121

Query: 123 NDAQPPTGSTDAPPSPPAKTADGSKANSSRRNYNNPSNIIGYGFAAASSFVALLLS 173
            D      ST  P SP   +A  S ++ ++   ++PS+  G GFAA   F+AL++S
Sbjct: 122 KD------STSPPKSPETPSASNS-SSPTKNAAHSPSHFSGSGFAA--FFMALIIS 166

[Close]

BLAST of CsGy1G007150 vs. TrEMBL
Match: tr|A0A2R6QHK0|A0A2R6QHK0_ACTCH (Uncharacterized protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc18437 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.1e-17
Identity = 51/113 (45.13%), Postives = 67/113 (59.29%), Query Frame = 0


Query: 17  VSSVGFSEELDGFFKGMDEATKIPQCMQKILPCQPFFKL----PEIPSSICCLPLKEMLV 76
           VS  G     DG   G DE++    C+QK++PCQP+ +        P + CC+PLKEM+ 
Sbjct: 36  VSGTGMXXXXDG---GGDESSNSLPCLQKLMPCQPYLQSGGSGSGAPPASCCVPLKEMIS 95

Query: 77  GDLQCFCSFFNDSEMLKVLNATQSQVLNLPKACGADDADISACDNDAQPPTGS 126
           GD  C C  FN+ ++LK  N TQ Q L LPKAC A +ADIS C  D+  P+GS
Sbjct: 96  GDTACLCGIFNNVDLLKTFNLTQDQALKLPKACSA-NADISVCKTDSAAPSGS 144

[Close]

BLAST of CsGy1G007150 vs. TrEMBL
Match: tr|A0A251PCU3|A0A251PCU3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G235000 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.3e-17
Identity = 59/131 (45.04%), Postives = 76/131 (58.02%), Query Frame = 0


Query: 1   MAARTILFFAVLTLLIVSSVGFSEELDGFFKGM-------DEAT-----KIPQCMQKILP 60
           MA+ +  FF+ L ++I S +GF     GF +G         E T        QC+QK++P
Sbjct: 56  MASISKRFFSFLFVIIFSLLGFV----GFSQGRKLSGLSDQEGTGGGSGASMQCVQKLIP 115

Query: 61  CQPFFKLPEIPSSICCLPLKEMLVGDLQCFCSFFNDSEMLKVLNATQSQVLNLPKACGAD 120
           CQPF K PE   + CC PLK+M+  D +C CS FN+  ML  LN TQ   L LPKACGA 
Sbjct: 116 CQPFLKAPEKAPAACCSPLKQMVSDDTKCLCSVFNNPGMLSNLNITQDDALKLPKACGA- 175

The following BLAST results are available for this feature:

BLAST of CsGy1G007150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650886.1	6.8e-91	100.00	PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Cucumis s...	[more]
XP_008465997.1	5.1e-46	63.43	PREDICTED: lipid transfer-like protein VAS [Cucumis melo]	[more]
XP_023520350.1	6.1e-31	50.00	protein YLS3-like [Cucurbita pepo subsp. pepo]	[more]
XP_023001811.1	2.2e-25	46.29	protein YLS3-like [Cucurbita maxima]	[more]
XP_022924146.1	3.2e-24	45.09	protein YLS3-like [Cucurbita moschata]	[more]

BLAST of CsGy1G007150 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G18280.1	7.2e-18	45.36	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G73560.1	8.5e-11	34.33	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G73550.1	1.6e-09	27.39	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G62790.1	1.3e-06	26.61	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

BLAST of CsGy1G007150 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy1G007150 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LQX5\|A0A0A0LQX5_CUCSA	4.5e-91	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042900 PE=4 SV=1	[more]
tr\|A0A1S3CQ75\|A0A1S3CQ75_CUCME	3.4e-46	63.43	lipid transfer-like protein VAS OS=Cucumis melo OX=3656 GN=LOC103503471 PE=4 SV=...	[more]
tr\|A0A2P6P1S4\|A0A2P6P1S4_ROSCH	1.3e-18	42.05	Putative bifunctional inhibitor/plant lipid transfer protein/seed storage helica...	[more]
tr\|A0A2R6QHK0\|A0A2R6QHK0_ACTCH	1.1e-17	45.13	Uncharacterized protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY0...	[more]
tr\|A0A251PCU3\|A0A251PCU3_PRUPE	3.3e-17	45.04	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G235000 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036312	Bifun_inhib/LTP/seed_sf
IPR016140	Bifunc_inhib/LTP/seed_store

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G007150.1	CsGy1G007150.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 35..115 e-value: 1.1E-12 score: 47.9
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 39..131 e-value: 1.9E-9 score: 39.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..148
None	No IPR available	PANTHER	PTHR33044	FAMILY NOT NAMED	coord: 2..159
None	No IPR available	PANTHER	PTHR33044:SF11	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 2..159
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 46..106 e-value: 1.60945E-9 score: 49.7327
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 40..109

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G007150	Cla018447	Watermelon (97103) v1	cgybwmB064
CsGy1G007150	Csa1G042900	Cucumber (Chinese Long) v2	cgybcuB001
CsGy1G007150	MELO3C002141	Melon (DHL92) v3.5.1	cgybmeB022
CsGy1G007150	ClCG04G010550	Watermelon (Charleston Gray)	cgybwcgB053
CsGy1G007150	CSPI01G07300	Wild cucumber (PI 183967)	cgybcpiB001
CsGy1G007150	CmaCh13G009830	Cucurbita maxima (Rimu)	cgybcmaB073
CsGy1G007150	Lsi02G002430	Bottle gourd (USVL1VR-Ls)	cgyblsiB018
CsGy1G007150	Cp4.1LG20g01700	Cucurbita pepo (Zucchini)	cgybcpeB069
CsGy1G007150	MELO3C002141.2	Melon (DHL92) v3.6.1	cgybmedB020
CsGy1G007150	CsaV3_1G007240	Cucumber (Chinese Long) v3	cgybcucB002
CsGy1G007150	Cla97C04G077370	Watermelon (97103) v2	cgybwmbB053
CsGy1G007150	Bhi08G001084	Wax gourd	cgybwgoB025
CsGy1G007150	Carg04854	Silver-seed gourd	carcgybB0393

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G007150	Cucurbita maxima (Rimu)	cgybcmaB085
CsGy1G007150	Cucurbita moschata (Rifu)	cgybcmoB067
CsGy1G007150	Cucurbita moschata (Rifu)	cgybcmoB082
CsGy1G007150	Cucurbita pepo (Zucchini)	cgybcpeB018
CsGy1G007150	Silver-seed gourd	carcgybB0500