Cla97C04G077370 (gene) Watermelon (97103) v2

Overview
NameCla97C04G077370
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionLipid transfer protein
LocationCla97Chr04 : 24938439 .. 24940158 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTCCTTGAGATTCTTCGCGTTGTTCCTCCTCTTGATTTTTTCTCGGATTTTCCTCGGTTTTTCTTACGATCTCGACGACTTTTTCAAAGGAATAGCATCGGACCTAATTCCGCCGTGTATGCAGAAGATTCTTCCGTGTCAACCATTCATCAAATTGCCGGGAAATCCGTCGCCGATGTGCTGTTTTCCATTGAAGGAGATGCTGGCCGGCGATCTTCCTTGCCTTTGCTCCTTCTTCAACAATATGGATCTGTTGAAGGCTCTGAATGTTACGCAGAGCCAAGCCTTGCAGCTTCCTAAGGCTTGCGGTGCTGCCGACGCTGATATTTCTGCCTGCAACCATGGTGAACTTCAAATTTCTCCCCTTATTTTTAACTTCACTGAATTCCATTTCCATTTTTCTTTATTTATACTATTAAAATAATGTGAACAGTATACGAGTCGTTTAAGTGACCTTCGTAGTTCGTAATTCTGTTTTCCCCCAAATTTTCAGCCGGGCCGCCGCCAACCGGTTCAACGGACGCGCCGCCGCCTCCTCCAGCCCCTAAAACTTCCGATGGTAAATTTCTGTGGTTTTTTCATAAATTAATTTAACTCTCTTAGTGCCCAAAATTTTGACTATGAATTGTGTGTGCTTTGTTGTTCGTTCTTGCATGAATTATTAATTGGTTAATTTGTGGATGATTTTGAGTGTTTTGTTGCTGAATTTTGTATTGATGTAATTAGTTAACTTTTTGTATAAATTATTAGTTAATTGTGTCTAAGATTTTAATTAAAATTTGATGAGTGTCAATTTCATAAAATATTAATCTTTAGGTTTCAGATTGTTCATACTTTTATATTTTTATTTTCATCCAATTTAGCATTTTATTGAGTGTTTTGATTGTTGTAACTGAAATAAAATTGAAACTCCAAACCGGTTATAATATTTAAAAAGTATCTAATATAGATCATCTAGTGAATATATGGTTTTGGGCCTATTCAATATGTTTAAAAAATTATGGATGAACCTAACAATAGAAATTCGAACACAAATATGTATTTTGTAGCAAATTCATAAATTGGATTCTAATTTAAATAGTTGTTTAAAATGGGCTTGAAACTATATATTTATAAATCATAAAACTAGTTGTAATTACTTCTATTATTTAGTTTACAATAAATTATTATTAATTTATTTATAAATATAATTTAGGTTAAAAATTTTATATAATTAATATTTTGTAATATTATATAATTTATACTACATCACATAATATATATTACATTAAAAAAAATTGAATTTATAACCTGACATATTGTATTTTTAAATGTTTTTATATTTATTTAATATAATTTTGTATTTTAAAATTTGAAATTCAAAATTTGGATACAATAAAAAGATATAAATGTTGTTTTCAAAATTTGCACCAACCATTTTCAAAACTAAAAATCACATGGTCATGCAAAGAATTATTAGGAGCCAAGTAGTCGGGACACTTGCAAATATAACAAAAGTTTAGATCTTAAAGTTAAGTTTTGGTTTATTTGTAATTGTCTTGAAATGTTGCTGTAATACATCATTATTATCCCTAAAAATGATACTTATTTTGTGATTAAAATGTTAATGTTGTAAATTGAATTCAGGTTCTTCTCCCAGCAAACCAACATACGGGATTGGCTATGGCTATGGCTTCGCAGCCTCGTTTGTGGCTTTGTTGCTTTCACCATTATAG

mRNA sequence

ATGTCGTCCTTGAGATTCTTCGCGTTGTTCCTCCTCTTGATTTTTTCTCGGATTTTCCTCGGTTTTTCTTACGATCTCGACGACTTTTTCAAAGGAATAGCATCGGACCTAATTCCGCCGTGTATGCAGAAGATTCTTCCGTGTCAACCATTCATCAAATTGCCGGGAAATCCGTCGCCGATGTGCTGTTTTCCATTGAAGGAGATGCTGGCCGGCGATCTTCCTTGCCTTTGCTCCTTCTTCAACAATATGGATCTGTTGAAGGCTCTGAATGTTACGCAGAGCCAAGCCTTGCAGCTTCCTAAGGCTTGCGGTGCTGCCGACGCTGATATTTCTGCCTGCAACCATGCCGGGCCGCCGCCAACCGGTTCAACGGACGCGCCGCCGCCTCCTCCAGCCCCTAAAACTTCCGATGGTTCTTCTCCCAGCAAACCAACATACGGGATTGGCTATGGCTATGGCTTCGCAGCCTCGTTTGTGGCTTTGTTGCTTTCACCATTATAG

Coding sequence (CDS)

ATGTCGTCCTTGAGATTCTTCGCGTTGTTCCTCCTCTTGATTTTTTCTCGGATTTTCCTCGGTTTTTCTTACGATCTCGACGACTTTTTCAAAGGAATAGCATCGGACCTAATTCCGCCGTGTATGCAGAAGATTCTTCCGTGTCAACCATTCATCAAATTGCCGGGAAATCCGTCGCCGATGTGCTGTTTTCCATTGAAGGAGATGCTGGCCGGCGATCTTCCTTGCCTTTGCTCCTTCTTCAACAATATGGATCTGTTGAAGGCTCTGAATGTTACGCAGAGCCAAGCCTTGCAGCTTCCTAAGGCTTGCGGTGCTGCCGACGCTGATATTTCTGCCTGCAACCATGCCGGGCCGCCGCCAACCGGTTCAACGGACGCGCCGCCGCCTCCTCCAGCCCCTAAAACTTCCGATGGTTCTTCTCCCAGCAAACCAACATACGGGATTGGCTATGGCTATGGCTTCGCAGCCTCGTTTGTGGCTTTGTTGCTTTCACCATTATAG

Protein sequence

MSSLRFFALFLLLIFSRIFLGFSYDLDDFFKGIASDLIPPCMQKILPCQPFIKLPGNPSPMCCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQLPKACGAADADISACNHAGPPPTGSTDAPPPPPAPKTSDGSSPSKPTYGIGYGYGFAASFVALLLSPL
Homology
[Close]
BLAST of Cla97C04G077370 vs. NCBI nr
Match: XP_008465997.1 (PREDICTED: lipid transfer-like protein VAS [Cucumis melo])

HSP 1 Score: 168.3 bits (425), Expect = 2.2e-38
Identity = 83/112 (74.11%), Postives = 94/112 (83.93%), Query Frame = 0 

Query: 3   SLRFFALFLLLIFSRIFLGFSYDLDDFFKGIASDLIPPCMQKILPCQPFIKLPGNPSPMC 62
           ++ FFA  +LL+FS +  GFS DLD FFKG+ S  IP CMQKILPCQPFIKLP NPS MC
Sbjct: 5   TMLFFAFLILLMFSSV--GFSQDLDAFFKGMESGKIPQCMQKILPCQPFIKLPENPSAMC 64

Query: 63  CFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQLPKACGAADADISAC 115
           C PLKEML GD+ CLCSFFN++D+LKALNVTQSQAL+LPKACGAAD DISAC
Sbjct: 65  CLPLKEMLVGDVQCLCSFFNDVDMLKALNVTQSQALKLPKACGAADVDISAC 114

[Close]
BLAST of Cla97C04G077370 vs. NCBI nr
Match: XP_011650886.1 (PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Cucumis sativus] >KGN64183.1 hypothetical protein Csa_1G042900 [Cucumis sativus])

HSP 1 Score: 149.8 bits (377), Expect = 8.1e-33
Identity = 77/121 (63.64%), Postives = 90/121 (74.38%), Query Frame = 0 

Query: 3   SLRFFALFLLLIFSRIFLGFSYDLDDFFKGI-ASDLIPPCMQKILPCQPFIKLPGNPSPM 62
           ++ FFA+  LLI S +  GFS +LD FFKG+  +  IP CMQKILPCQPF KLP  PS +
Sbjct: 5   TILFFAVLTLLIVSSV--GFSEELDGFFKGMDEATKIPQCMQKILPCQPFFKLPEIPSSI 64

Query: 63  CCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQLPKACGAADADISACNHAGPPP 122
           CC PLKEML GDL C CSFFN+ ++LK LN TQSQ L LPKACGA DADISAC++   PP
Sbjct: 65  CCLPLKEMLVGDLQCFCSFFNDSEMLKVLNATQSQVLNLPKACGADDADISACDNDAQPP 123

[Close]
BLAST of Cla97C04G077370 vs. NCBI nr
Match: XP_023520350.1 (protein YLS3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 142.9 bits (359), Expect = 9.9e-31
Identity = 76/123 (61.79%), Postives = 93/123 (75.61%), Query Frame = 0 

Query: 1   MSSLRFFALFLLLIFSRIFLGFSYDLDDFFKGIASDL---IPPCMQKILPCQPFIKLPGN 60
           M+S RFFA FLLLI S++F+GFS DL +F KG  S L   +PPCM+++L CQP+IK P N
Sbjct: 1   MASSRFFA-FLLLISSQMFVGFSQDLSEFLKGTESILDGKLPPCMRQMLTCQPYIKSPEN 60

Query: 61  PSPMCCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQLPKACGAADADISACNHA 120
           P P CC PLKE+L  DLPCLCSFFNN  +LK LNV+QS+AL+LPK CG A+ DIS C+ A
Sbjct: 61  PPPACCTPLKELLDSDLPCLCSFFNNEKMLKTLNVSQSRALELPKNCG-AELDISGCSDA 120

[Close]
BLAST of Cla97C04G077370 vs. NCBI nr
Match: XP_023001811.1 (protein YLS3-like [Cucurbita maxima])

HSP 1 Score: 141.4 bits (355), Expect = 2.9e-30
Identity = 75/123 (60.98%), Postives = 92/123 (74.80%), Query Frame = 0 

Query: 1   MSSLRFFALFLLLIFSRIFLGFSYDLDDFFKGIASDL---IPPCMQKILPCQPFIKLPGN 60
           M+S RFFA FLLLI S++F+GFS DL +F KG  S L   +PPCM+++L CQP+IK P N
Sbjct: 1   MASSRFFA-FLLLISSQMFVGFSQDLSEFLKGTESILDRQLPPCMRQMLSCQPYIKSPEN 60

Query: 61  PSPMCCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQLPKACGAADADISACNHA 120
           P   CC PLKE+L  DLPCLCSFFNN  +L  LNV+QS+AL+LPK CG A+ DIS C+HA
Sbjct: 61  PPTACCTPLKELLNSDLPCLCSFFNNEKMLNTLNVSQSRALELPKNCG-AELDISGCSHA 120

[Close]
BLAST of Cla97C04G077370 vs. NCBI nr
Match: XP_022924146.1 (protein YLS3-like [Cucurbita moschata])

HSP 1 Score: 138.7 bits (348), Expect = 1.9e-29
Identity = 74/123 (60.16%), Postives = 92/123 (74.80%), Query Frame = 0 

Query: 1   MSSLRFFALFLLLIFSRIFLGFSYDLDDFFKGIASDL---IPPCMQKILPCQPFIKLPGN 60
           M+S RF A FLLLI S++F+GFS DL +F KG  S L   +PPCM+++L CQP+IK P N
Sbjct: 1   MASSRFVA-FLLLISSQMFVGFSQDLSEFLKGTESILDGNLPPCMRQMLSCQPYIKSPEN 60

Query: 61  PSPMCCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQLPKACGAADADISACNHA 120
           P P CC PLKE+L  D+PCLCSFF+N  +LK LNV+QS+AL+LPK CG AD DIS C+ A
Sbjct: 61  PPPACCTPLKELLDSDVPCLCSFFSNEKMLKTLNVSQSRALELPKNCG-ADLDISGCSDA 120

[Close]
BLAST of Cla97C04G077370 vs. TrEMBL
Match: tr|A0A1S3CQ75|A0A1S3CQ75_CUCME (lipid transfer-like protein VAS OS=Cucumis melo OX=3656 GN=LOC103503471 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.5e-38
Identity = 83/112 (74.11%), Postives = 94/112 (83.93%), Query Frame = 0 

Query: 3   SLRFFALFLLLIFSRIFLGFSYDLDDFFKGIASDLIPPCMQKILPCQPFIKLPGNPSPMC 62
           ++ FFA  +LL+FS +  GFS DLD FFKG+ S  IP CMQKILPCQPFIKLP NPS MC
Sbjct: 5   TMLFFAFLILLMFSSV--GFSQDLDAFFKGMESGKIPQCMQKILPCQPFIKLPENPSAMC 64

Query: 63  CFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQLPKACGAADADISAC 115
           C PLKEML GD+ CLCSFFN++D+LKALNVTQSQAL+LPKACGAAD DISAC
Sbjct: 65  CLPLKEMLVGDVQCLCSFFNDVDMLKALNVTQSQALKLPKACGAADVDISAC 114

[Close]
BLAST of Cla97C04G077370 vs. TrEMBL
Match: tr|A0A0A0LQX5|A0A0A0LQX5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042900 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 5.3e-33
Identity = 77/121 (63.64%), Postives = 90/121 (74.38%), Query Frame = 0 

Query: 3   SLRFFALFLLLIFSRIFLGFSYDLDDFFKGI-ASDLIPPCMQKILPCQPFIKLPGNPSPM 62
           ++ FFA+  LLI S +  GFS +LD FFKG+  +  IP CMQKILPCQPF KLP  PS +
Sbjct: 5   TILFFAVLTLLIVSSV--GFSEELDGFFKGMDEATKIPQCMQKILPCQPFFKLPEIPSSI 64

Query: 63  CCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQLPKACGAADADISACNHAGPPP 122
           CC PLKEML GDL C CSFFN+ ++LK LN TQSQ L LPKACGA DADISAC++   PP
Sbjct: 65  CCLPLKEMLVGDLQCFCSFFNDSEMLKVLNATQSQVLNLPKACGADDADISACDNDAQPP 123

[Close]
BLAST of Cla97C04G077370 vs. TrEMBL
Match: tr|A0A200QFW3|A0A200QFW3_9MAGN (Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain OS=Macleaya cordata OX=56857 GN=BVC80_7819g10 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.7e-18
Identity = 59/128 (46.09%), Postives = 74/128 (57.81%), Query Frame = 0 

Query: 1   MSSLRFFALFLLLIFSRIFLGFSYDLDDFFKGIASDL----------IPPCMQKILPCQP 60
           M S +FF   +LL  S +FLGFS       +GI   L             C QK+LPCQ 
Sbjct: 1   MGSAKFFLSVILLFSSWVFLGFSQ-----LEGIIGALXXXXXXXXXXXXECAQKLLPCQA 60

Query: 61  FIKLPGNPSPMCCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQLPKACGAADAD 119
           ++K P +P   CC PLK+M+  D+ CLC  FNN DLLK  +VTQ +AL+L   CG A AD
Sbjct: 61  YLKPPSSPPDTCCVPLKQMITDDVKCLCGIFNNQDLLKTFHVTQEEALKLLGECG-AKAD 120

[Close]
BLAST of Cla97C04G077370 vs. TrEMBL
Match: tr|A0A251PCU3|A0A251PCU3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G235000 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.3e-18
Identity = 57/119 (47.90%), Postives = 73/119 (61.34%), Query Frame = 0 

Query: 3   SLRFFALFLLLIFSRI-FLGFSYD------LDDFFKGIASDLIPPCMQKILPCQPFIKLP 62
           S RFF+   ++IFS + F+GFS         D    G  S     C+QK++PCQPF+K P
Sbjct: 60  SKRFFSFLFVIIFSLLGFVGFSQGRKLSGLSDQEGTGGGSGASMQCVQKLIPCQPFLKAP 119

Query: 63  GNPSPMCCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQLPKACGAADADISAC 115
                 CC PLK+M++ D  CLCS FNN  +L  LN+TQ  AL+LPKACG A+ADIS C
Sbjct: 120 EKAPAACCSPLKQMVSDDTKCLCSVFNNPGMLSNLNITQDDALKLPKACG-ANADISIC 177

[Close]
BLAST of Cla97C04G077370 vs. TrEMBL
Match: tr|M5WVS4|M5WVS4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa012361mg PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.3e-18
Identity = 57/119 (47.90%), Postives = 73/119 (61.34%), Query Frame = 0 

Query: 3   SLRFFALFLLLIFSRI-FLGFSYD------LDDFFKGIASDLIPPCMQKILPCQPFIKLP 62
           S RFF+   ++IFS + F+GFS         D    G  S     C+QK++PCQPF+K P
Sbjct: 5   SKRFFSFLFVIIFSLLGFVGFSQGRKLSGLSDQEGTGGGSGASMQCVQKLIPCQPFLKAP 64

Query: 63  GNPSPMCCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQLPKACGAADADISAC 115
                 CC PLK+M++ D  CLCS FNN  +L  LN+TQ  AL+LPKACG A+ADIS C
Sbjct: 65  EKAPAACCSPLKQMVSDDTKCLCSVFNNPGMLSNLNITQDDALKLPKACG-ANADISIC 122

[Close]
BLAST of Cla97C04G077370 vs. TAIR10
Match: AT1G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 96.7 bits (239), Expect = 1.5e-20
Identity = 45/88 (51.14%), Postives = 60/88 (68.18%), Query Frame = 0 

Query: 40  PCMQKILPCQPFIKLPGNPSPMCCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQ 99
           PC+QK++PCQP++ L   P   CC PL E++A D  CLC+ FNN+D+LK+LN+T+  AL 
Sbjct: 40  PCIQKLMPCQPYLHLATPPPATCCMPLNEIVAKDATCLCAVFNNVDMLKSLNLTKENALD 99

Query: 100 LPKACGAADADISAC------NHAGPPP 122
           LPKACG A AD+S C      N +  PP
Sbjct: 100 LPKACG-AKADVSLCKTSAGTNSSSTPP 126

[Close]
BLAST of Cla97C04G077370 vs. TAIR10
Match: AT1G73560.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 76.6 bits (187), Expect = 1.6e-14
Identity = 39/81 (48.15%), Postives = 52/81 (64.20%), Query Frame = 0 

Query: 41  CMQKILPCQPFI-KLPGNPSPMCCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQ 100
           C+QK+LPCQP+I  L          P+KE++  D PCLC  FNN ++LKALN+T+  AL 
Sbjct: 33  CLQKLLPCQPYIHSLNPXXXXXXXGPMKEIVEKDAPCLCIAFNNPEVLKALNLTKENALL 92

Query: 101 LPKACGAADADISACNHAGPP 121
           LPKACG  + D+S C+    P
Sbjct: 93  LPKACG-VNPDVSLCSKIATP 112

[Close]
BLAST of Cla97C04G077370 vs. TAIR10
Match: AT1G73550.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 73.2 bits (178), Expect = 1.7e-13
Identity = 32/79 (40.51%), Postives = 51/79 (64.56%), Query Frame = 0 

Query: 41  CMQKILPCQPFIKLPGNPSPMCCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQL 100
           C+ K++PCQP+I L   P P+CC P+K++   D+ CLC+ F + DLL+ L +T+  A+++
Sbjct: 35  CVAKLMPCQPYIHLSIPPPPLCCNPMKQIAEKDVSCLCTAFKHPDLLRFLALTKENAIKI 94

Query: 101 PKACGAADADISACNHAGP 120
             +CG  + D S CN   P
Sbjct: 95  LDSCG-INHDPSVCNKTNP 112

[Close]
BLAST of Cla97C04G077370 vs. TAIR10
Match: AT1G62790.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 56.2 bits (134), Expect = 2.2e-08
Identity = 28/80 (35.00%), Postives = 41/80 (51.25%), Query Frame = 0 

Query: 41  CMQKILPCQPFIKLPGNPSPMCCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQL 100
           C+ K++PC   +     P   CC  +KE +  +L CLC+ + +  LL   NVT  +AL L
Sbjct: 29  CVSKLVPCFNDLNTTTTPVKECCDSIKEAVEKELTCLCTIYTSPGLLAQFNVTTEKALGL 88

Query: 101 PKACGAADADISACNHAGPP 121
            + C     D+SAC   G P
Sbjct: 89  SRRCNVT-TDLSACTAKGAP 107

[Close]
BLAST of Cla97C04G077370 vs. TAIR10
Match: AT3G22600.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 47.0 bits (110), Expect = 1.3e-05
Identity = 25/79 (31.65%), Postives = 36/79 (45.57%), Query Frame = 0 

Query: 41  CMQKILPCQPFIK-LPGN---PSPMCCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQ 100
           C   ++   P +  + GN   P+  CC  L  ++     CLC   N       +NV Q+Q
Sbjct: 28  CTNALISMSPCLNYITGNSTSPNQQCCNQLSRVVQSSPDCLCQVLNGGGSQLGINVNQTQ 87

Query: 101 ALQLPKACGAADADISACN 116
           AL LP+AC      +S CN
Sbjct: 88  ALGLPRACNVQTPPVSRCN 106

The following BLAST results are available for this feature:
BLAST of Cla97C04G077370 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008465997.12.2e-3874.11PREDICTED: lipid transfer-like protein VAS [Cucumis melo][more]
XP_011650886.18.1e-3363.64PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Cucumis s... [more]
XP_023520350.19.9e-3161.79protein YLS3-like [Cucurbita pepo subsp. pepo][more]
XP_023001811.12.9e-3060.98protein YLS3-like [Cucurbita maxima][more]
XP_022924146.11.9e-2960.16protein YLS3-like [Cucurbita moschata][more]
BLAST of Cla97C04G077370 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CQ75|A0A1S3CQ75_CUCME1.5e-3874.11lipid transfer-like protein VAS OS=Cucumis melo OX=3656 GN=LOC103503471 PE=4 SV=... [more]
tr|A0A0A0LQX5|A0A0A0LQX5_CUCSA5.3e-3363.64Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042900 PE=4 SV=1[more]
tr|A0A200QFW3|A0A200QFW3_9MAGN1.7e-1846.09Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain ... [more]
tr|A0A251PCU3|A0A251PCU3_PRUPE6.3e-1847.90Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G235000 PE=4 SV=1[more]
tr|M5WVS4|M5WVS4_PRUPE6.3e-1847.90Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa012361mg PE=4 SV=1[more]
BLAST of Cla97C04G077370 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C04G077370 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G18280.11.5e-2051.14Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT1G73560.11.6e-1448.15Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT1G73550.11.7e-1340.51Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT1G62790.12.2e-0835.00Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT3G22600.11.3e-0531.65Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036312Bifun_inhib/LTP/seed_sf
IPR016140Bifunc_inhib/LTP/seed_store
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C04G077370.1Cla97C04G077370.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 40..110
e-value: 9.1E-12
score: 46.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..143
NoneNo IPR availablePANTHERPTHR33044FAMILY NOT NAMEDcoord: 5..143
NoneNo IPR availablePANTHERPTHR33044:SF11BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEINcoord: 5..143
NoneNo IPR availableCDDcd00010AAI_LTSScoord: 45..105
e-value: 4.02634E-11
score: 54.3551
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 39..114
e-value: 1.5E-13
score: 50.6
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilySUPERFAMILYSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 41..108

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C04G077370Cla018447Watermelon (97103) v1wmwmbB291
Cla97C04G077370Csa1G042900Cucumber (Chinese Long) v2cuwmbB054
Cla97C04G077370MELO3C002141Melon (DHL92) v3.5.1mewmbB159
Cla97C04G077370ClCG04G010550Watermelon (Charleston Gray)wcgwmbB200
Cla97C04G077370CSPI01G07300Wild cucumber (PI 183967)cpiwmbB055
Cla97C04G077370CmaCh13G009830Cucurbita maxima (Rimu)cmawmbB233
Cla97C04G077370Lsi02G002430Bottle gourd (USVL1VR-Ls)lsiwmbB184
Cla97C04G077370CsGy1G007150Cucumber (Gy14) v2cgybwmbB053
Cla97C04G077370MELO3C002141.2Melon (DHL92) v3.6.1medwmbB147
Cla97C04G077370Carg04854Silver-seed gourdcarwmbB0409
Cla97C04G077370CsaV3_1G007240Cucumber (Chinese Long) v3cucwmbB054
Cla97C04G077370Bhi08G001084Wax gourdwgowmbB490
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C04G077370Silver-seed gourdcarwmbB0518
Cla97C04G077370Cucumber (Gy14) v1cgywmbB186
Cla97C04G077370Cucurbita maxima (Rimu)cmawmbB422
Cla97C04G077370Cucurbita moschata (Rifu)cmowmbB216
Cla97C04G077370Cucurbita moschata (Rifu)cmowmbB402