Cp4.1LG20g08990 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG20g08990
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Fasciclin-like arabinogalactan protein
Location	Cp4.1LG20 : 6841086 .. 6843996 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTAAGAGTAATGAAAGCTTTTCTTGTTTTGAAAAGATCCAAAAATAATGATTTCAAATACAATATAAAGTTATAATTTTACATAAAGTTTCATCTCTAATTTAACTTTTTTATTTGTTTAAATAAATTATTAATTATTAATGGTTACTAAAAGTTTAAAATTCTTGAACGGGCCCATTCTCCTTGCTAGCACCCTGTCTAGTGTCCACTCCCCAGCGTCCTCGAGGCACACGGCCTGATGTCTGTCTCTGATACCATTTGTAACAACCCAAGTCCATCCCTAGCAGATATGGTCATATTTGGTCTTTCCCTCTTAGCTTCCCCTCAAAGTTTTCAAGAAGCGTATGCTATGAAAATGTTTCCACATTTTATAAAGAATGTTTCGTTTTCCTCTCTAACTGACGTGGGATCTCACAGTTTCGACCCGACCTCCCCATCTAATTCGTCTTTTAATTTGTTTCAGACATTTTTAACCAAAATCTGACACAAAAGTTTAGAGACCAAAATGATACTTAAACAAATAATAATAATAATCAAAACAATTTATTCTTACAAGCTTTTTTTATTTATCTTCAGCCTTACAGTTTGGATAGTTTGGCTAGTTACCGTCAGCCTCACAATTCTAAAACTGGCCTACGAGGGAGAGGTTCTCAAACCCTTATAATAATTACTTCATTCCCCTCCCCAACAAACCTGAGATCTCAAATCCACCGGTCCAACGTCCTTGCTGGCACGCTGCCCTATTTGGCCTTGTTGGCACACTGTCCTATTGTCCTATTTGGCCTTGATACCATTTGTAATAGCCAAATCCTATTAAATATTGTCAACTTACTAATTTTAAAAAGCATTTATTAAAAGGAATACTTAATTCTCCCCTCTAACCGACGTGGAATCTCACAATCGTTCATGAAAAGAGCAAAGCTTCTCCGAGCTATGTCCTAACGCACCCTCTTAGAAGCTTGACGTAGACACCTAACTTTCCCATCCTTTATCTCAGCTTTGTATAAAAAGGCCCTTTGGGTCCTTTCCTCTTGGCCACCAAAATAATCTTCTTTTTTTTTTTTGGTGTTTTTGGCAATCGAGAGGGAAGGATCATGAACAGCCTCTTCTCTCTCGTAATCTTCTTTCTCTACCTCTTCGTTGGTGGCAGTTATGGGCAGTCGCCGGCGGAGGCTCCGGGACCGCCGCCGCCGATGAATATATCAAGAATACTGGAAAAGGGTGGGCAGTTCAGTATTCTGATAAGGCTTTTGAAGAGCACTCAAGTGGCCAACCAAATCAACACTCAGCTTAATGACTCCAATTCTGAACTCACCATTTTTGCCCCCACTGATAATGCTTTCTCCAACCTCCAATCCGGTACCTTTTTTTTTTATTTTTTTTATTTTATTTTATTTTATTTTATTTATTTCCCCGATATATAATTATTGAATTTAATTAGTATTAGTTATTTCTTTAGTCATAATAGATTATTTTAATATTTGATTTTAGAGATGTTCATGGAATGAGTCGGGAATGTGGAAGCTTTTCGGGTCTTTATTACCACCTCCTAATTCATTTTCTATCTCTATGAAATTTTACATTTTTTTTTCCAAGAACGGATTTTTTTTCACCTTTATATCTATTAAAATATTCATTTCAATAATTTTTAATTGATAATTTTATTTTCTTATAAAGTTTCTAAAAAAAAAAATAAAAAAAAAAATAATAAATTTAATAATTTTTATAAAGAAAAATTTAAATGAGATCAGTTGGGTTTGGGGTAGGGATCAAGACGTGAGATCTGACCTTGGCGGGAAAAGAGAACGTAGCGTCTTTTATATAGGTGTGGAAACCTTTTAGTAGCGGACGTGTTTTAAAAACCTTGAAGGAAAGTCTGGAAGAGAAAGCTCAAAGAAATAATATTTGCTAGCAATGGGCTTGAACCGTTACAAATAGTATCAGAGTAAGACACCGGGGTGATGTGCCAGTGAGGAGGTTGAGCCCTGAAGGGGGGTGGACACAAGGCGGTGTGCCAATAAGGATGTTGGGACTCGAAGAGGGTGGATTGGAGAATCCCACATCGATTGGAAAAGAGAATGAGTGCTAGCAAGAGGATGCGCGGCCCTGAACGAGATGGATTGTGAGGTCCCACATCAGTTGGGGAGGAGAACGAACATTCTTTGTTGGGTCCCGAACAAGGGTGGATTATGAGATCCCACAACTGTTGGGGAGAAAAAATGAAACATTTTTTATAAAGATGTGAAACCTCTCCTTACCGTACTCATTTTAAAAATTTCAACGGAAAATCCGAGAGCACAATATCAATTAGGCTTGTGCTGTTACACTAGAAATATAATCTCTATCCCGACCTTTTTAACCTAAAATTTTTATATGCGATTAACTTTTAAATAGTTGAAATAATTGAATGATTGATGAATACAAAACAGGCACACTCAACTCCCTCAACGACCAAGAAAAAGTAGAGCTTCTCCAATTCCACATGATCCCAACTTTCCTCTCTCTCTCAAACTTCCAAACAGTCAGCAATCCGGTCAGAACTCAGGCCGGCGNGTCAGCAATCCGGTCAGAACTCAGGCCGGCGACGCCTATGAGTTCCCTCTCAACGTCACCACCTCCGGCAACTCCGTCAACGTCTCCTCCGGCCTCACCAACACCTCCATCTCCGGCACCGTCTACTCCGACAACCAGCTCGCCGTCTACCAGATCGACTCAGTTCTCAAGCCAATTGGCATCTTCCAGCCCCGCCCACCACCCCCGGCTCCCGCGCCGGAGAAGTCTAAGAAGAAGGCCAAGGCCATTTCTGAGGATCCCAAGGATTCGACCAATGACAACTCCTCCGCCGTTCCGCTTGCCGGAATGTCGGCCTTCTTCACCGGAGCTGCTGCCGTCGCCGGAATAATGCTG

mRNA sequence

ATGAAGATCATGAACAGCCTCTTCTCTCTCGTAATCTTCTTTCTCTACCTCTTCGTTGGTGGCAGTTATGGGCAGTCGCCGGCGGAGGCTCCGGGACCGCCGCCGCCGATGAATATATCAAGAATACTGGAAAAGGGTGGGCAGTTCAGTATTCTGATAAGGCTTTTGAAGAGCACTCAAGTGGCCAACCAAATCAACACTCAGCTTAATGACTCCAATTCTGAACTCACCATTTTTGCCCCCACTGATAATGCTTTCTCCAACCTCCAATCCGGCACACTCAACTCCCTCAACGACCAAGAAAAAGTAGAGCTTCTCCAATTCCACATGATCCCAACTTTCCTCTCTCTCTCAAACTTCCAAACAGTCAGCAATCCGAACTCAGGCCGGCGNGTCAGCAATCCGGTCAGAACTCAGGCCGGCGACGCCTATGAGTTCCCTCTCAACGTCACCACCTCCGGCAACTCCGTCAACGTCTCCTCCGGCCTCACCAACACCTCCATCTCCGGCACCGTCTACTCCGACAACCAGCTCGCCGTCTACCAGATCGACTCAGTTCTCAAGCCAATTGGCATCTTCCAGCCCCGCCCACCACCCCCGGCTCCCGCGCCGGAGAAGTCTAAGAAGAAGGCCAAGGCCATTTCTGAGGATCCCAAGGATTCGACCAATGACAACTCCTCCGCCGTTCCGCTTGCCGGAATGTCGGCCTTCTTCACCGGAGCTGCTGCCGTCGCCGGAATAATGCTG

Coding sequence (CDS)

ATGAAGATCATGAACAGCCTCTTCTCTCTCGTAATCTTCTTTCTCTACCTCTTCGTTGGTGGCAGTTATGGGCAGTCGCCGGCGGAGGCTCCGGGACCGCCGCCGCCGATGAATATATCAAGAATACTGGAAAAGGGTGGGCAGTTCAGTATTCTGATAAGGCTTTTGAAGAGCACTCAAGTGGCCAACCAAATCAACACTCAGCTTAATGACTCCAATTCTGAACTCACCATTTTTGCCCCCACTGATAATGCTTTCTCCAACCTCCAATCCGGCACACTCAACTCCCTCAACGACCAAGAAAAAGTAGAGCTTCTCCAATTCCACATGATCCCAACTTTCCTCTCTCTCTCAAACTTCCAAACAGTCAGCAATCCGAACTCAGGCCGGCGNGTCAGCAATCCGGTCAGAACTCAGGCCGGCGACGCCTATGAGTTCCCTCTCAACGTCACCACCTCCGGCAACTCCGTCAACGTCTCCTCCGGCCTCACCAACACCTCCATCTCCGGCACCGTCTACTCCGACAACCAGCTCGCCGTCTACCAGATCGACTCAGTTCTCAAGCCAATTGGCATCTTCCAGCCCCGCCCACCACCCCCGGCTCCCGCGCCGGAGAAGTCTAAGAAGAAGGCCAAGGCCATTTCTGAGGATCCCAAGGATTCGACCAATGACAACTCCTCCGCCGTTCCGCTTGCCGGAATGTCGGCCTTCTTCACCGGAGCTGCTGCCGTCGCCGGAATAATGCTG

Protein sequence

MKIMNSLFSLVIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNPNSGRRVSNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGIFQPRPPPPAPAPEKSKKKAKAISEDPKDSTNDNSSAVPLAGMSAFFTGAAAVAGIML

Homology

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BLAST of Cp4.1LG20g08990 vs. Swiss-Prot
Match: FLA12_ARATH (Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana GN=FLA12 PE=2 SV=2)

HSP 1 Score: 231.5 bits (589), Expect = 1.0e-59
Identity = 122/205 (59.51%), Postives = 162/205 (79.02%), Query Frame = 1


Query: 26  SPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQINTQLNDSNSELTIFAPTDNA 85
           SPA AP PP P N+++ILEK GQF++ IRLLKST VANQ+  QLN+S++ +TIFAP+D++
Sbjct: 27  SPAVAPAPPGPTNVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNSDNGITIFAPSDSS 86

Query: 86  FSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNPNSGRRVSNPVRTQAGDAYE 145
           F+ L++GTLNSL D+++VEL+QFH+IP+++S SNFQT+SNP         +RTQAGD+ +
Sbjct: 87  FTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSNFQTISNP---------LRTQAGDSAD 146

Query: 146 --FPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGIFQPRPPPPAPA 205
             FPLNVTTSGN+VN++SG+TNT++SG VYSD QLAVYQ+D VL P  +F PRPP PAPA
Sbjct: 147 GHFPLNVTTSGNTVNITSGVTNTTVSGNVYSDGQLAVYQVDKVLLPQQVFDPRPPAPAPA 206

Query: 206 PEKSKKKAKAISEDPKDSTNDNSSA 229
           P  SK K K   +D  DS++D+S A
Sbjct: 207 PSVSKSKKK---KDDSDSSSDDSPA 219

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BLAST of Cp4.1LG20g08990 vs. Swiss-Prot
Match: FLA11_ARATH (Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana GN=FLA11 PE=2 SV=2)

HSP 1 Score: 208.4 bits (529), Expect = 9.2e-53
Identity = 121/240 (50.42%), Postives = 168/240 (70.00%), Query Frame = 1


Query: 12  IFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQINTQLND 71
           +F  +L +  +YGQ+PA  PGP  P NI+ ILEK GQF++ IRLLKSTQ ++QINTQLN 
Sbjct: 12  LFIFFLVIATTYGQAPA--PGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNS 71

Query: 72  SNSE-LTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNPNSGR 131
           S+S  LT+FAPTDNAF++L+SGTLNSL+DQ+KV+L+QFH++PT +++  FQT        
Sbjct: 72  SSSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQT-------- 131

Query: 132 RVSNPVRTQAGDAY--EFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLK 191
            VSNP+RTQAGD    +FPLN+T+SGN VN+++G+ + +++ +VYSD QLAVYQ+D VL 
Sbjct: 132 -VSNPLRTQAGDGQNGKFPLNITSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLL 191

Query: 192 PIGIFQPRPPPPAPAPEKSKKKAKAIS---EDPKDSTNDNSSAVPLAGMSAFFTGAAAVA 246
           P+ +F      PAPAPEK    +K  +   +D  DST+ + +     G     T  AA+A
Sbjct: 192 PLAMF-GSSVAPAPAPEKGGSVSKGSASGGDDGGDSTDSSDAERTGFGFGIRITTVAAIA 239

[Close]

BLAST of Cp4.1LG20g08990 vs. Swiss-Prot
Match: FLA13_ARATH (Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana GN=FLA13 PE=1 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 4.6e-36
Identity = 96/221 (43.44%), Postives = 133/221 (60.18%), Query Frame = 1


Query: 25  QSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQINTQLNDSNSELTIFAPTDN 84
           Q  A APGP  P+NI+ ILEKGGQF  LIRLL +TQ+ NQIN Q+N S+  +T+ APTDN
Sbjct: 23  QRAAPAPGPAGPINITAILEKGGQFVTLIRLLNTTQIGNQINIQINSSSEGMTVLAPTDN 82

Query: 85  AFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNPNSGRRVSNPVRTQAGD-- 144
           AF NL+ GTLN L+  ++V+L+ +H+ P F +L +  +VSNP         VRTQA    
Sbjct: 83  AFQNLKPGTLNKLSPDDQVKLILYHVSPKFYTLEDLLSVSNP---------VRTQASGRD 142

Query: 145 -AYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGIFQPR----- 204
               + LN T  GN VNVS+G+  T +S ++  +  LAVY +D VL P  +F  R     
Sbjct: 143 VGGVYGLNFTGQGNQVNVSTGVVETRLSTSLRQERPLAVYVVDMVLLPEEMFGERKISPM 202

Query: 205 -PPPPAPAPE-----KSKKKAKAISEDPKDSTNDNSSAVPL 232
            PPP + +P+     +S KKA A SE  K  + + ++ + L
Sbjct: 203 APPPKSKSPDVSDDSESSKKAAAPSESEKSGSGEMNTGLGL 234

[Close]

BLAST of Cp4.1LG20g08990 vs. Swiss-Prot
Match: FLA6_ARATH (Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana GN=FLA6 PE=2 SV=2)

HSP 1 Score: 141.7 bits (356), Expect = 1.1e-32
Identity = 100/233 (42.92%), Postives = 135/233 (57.94%), Query Frame = 1


Query: 5   NSLFSLVIFFLYLFVGGSYGQSPAEAPGPPP---PMNISRILEKGGQFSILIRLLKSTQV 64
           +SLFS V+  ++LF    Y QS   AP P     P+N++ ILE G QF+ LI+LL +TQV
Sbjct: 3   SSLFSYVVLLIFLFTI-PYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQV 62

Query: 65  ANQINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQ 124
             Q++ QLN S+  +TIFAPTDNAF+ L+ GTLNSL  Q++++L+ +H+IP + SLS+  
Sbjct: 63  GFQVSVQLNSSDQGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSDLL 122

Query: 125 TVSNPNSGRRVSNPVRTQA--GDAYEFPLNVT--TSGNSVNVSSGLTNTSISGTVYSDNQ 184
                      SNPVRTQA   D   F LN T     N VNVS+G+  T I+  +     
Sbjct: 123 L---------ASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFP 182

Query: 185 LAVYQIDSVLKPIGIFQPRPPPP-APAPEKSKKKAKAISEDPKDSTNDNSSAV 230
           LAVY +DSVL P  +F  +  P  APAP+ S   + A S    D      S+V
Sbjct: 183 LAVYVVDSVLLPEELFGTKTTPTGAPAPKSSTSSSDADSPAADDEHKSAGSSV 225

[Close]

BLAST of Cp4.1LG20g08990 vs. Swiss-Prot
Match: FLA9_ARATH (Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana GN=FLA9 PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 8.9e-32
Identity = 88/215 (40.93%), Postives = 127/215 (59.07%), Query Frame = 1


Query: 6   SLFSLVIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQI 65
           +L  L++    L    +  Q  A AP P  P+N++ ILEKGGQF+  I LL  TQV +Q+
Sbjct: 7   TLAPLLLIAAVLLATKATAQPAAPAPEPAGPINLTAILEKGGQFTTFIHLLNITQVGSQV 66

Query: 66  NTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSN 125
           N Q+N S+  +T+FAPTDNAF NL+ GTLN L+  ++V+L+ +H+ P + S+ +  +   
Sbjct: 67  NIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQLSPDDQVKLILYHVSPKYYSMDDLLS--- 126

Query: 126 PNSGRRVSNPVRTQAG--DAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQI 185
                 VSNPVRTQA   D   + LN T   N +NVS+G   T IS ++     LAVY +
Sbjct: 127 ------VSNPVRTQASGRDNGVYGLNFTGQTNQINVSTGYVETRISNSLRQQRPLAVYVV 186

Query: 186 DSVLKPIGIF-QPRPPPPAPAPEKSKKKAKAISED 218
           D VL P  +F + +  P APAP   K K+  +++D
Sbjct: 187 DMVLLPGEMFGEHKLSPIAPAP---KSKSGGVTDD 209

[Close]

BLAST of Cp4.1LG20g08990 vs. TrEMBL
Match: A0A0A0LVA0_CUCSA (Arabinogalactan protein 2 OS=Cucumis sativus GN=Csa_1G085380 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 1.1e-105
Identity = 206/245 (84.08%), Postives = 221/245 (90.20%), Query Frame = 1


Query: 5   NSLFSLVIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQ 64
           NSLFSLVI  ++ F+  SYGQSPAEAPGPPPPMNI++ILEKGGQF++LIRLLK+TQVANQ
Sbjct: 3   NSLFSLVILLIFFFLDCSYGQSPAEAPGPPPPMNITKILEKGGQFNVLIRLLKNTQVANQ 62

Query: 65  INTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVS 124
           INTQLNDSNSELT+FAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT  
Sbjct: 63  INTQLNDSNSELTLFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT-- 122

Query: 125 NPNSGRRVSNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQID 184
                  +SNPVRTQAGDAYEFPLNVTTSGNSVNVSSGL NTSISGTVY+DNQLA+YQID
Sbjct: 123 -------ISNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYTDNQLAIYQID 182

Query: 185 SVLKPIGIFQPRPPPPAPAPEKSKKKAKAISEDPKDSTNDNSSAVPLAGMSAFFTGAAAV 244
           SVLKPIG+FQPRPPPPAPAPEKSKKKAK  SE PKDS +DNSSAVPLAG+S   TGAA V
Sbjct: 183 SVLKPIGVFQPRPPPPAPAPEKSKKKAKGNSESPKDSDDDNSSAVPLAGVSVISTGAAVV 238

Query: 245 AGIML 250
            GIML
Sbjct: 243 VGIML 238

[Close]

BLAST of Cp4.1LG20g08990 vs. TrEMBL
Match: A0A061GV39_THECC (FASCICLIN-like arabinogalactan-protein 11 OS=Theobroma cacao GN=TCM_041052 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 2.1e-64
Identity = 136/222 (61.26%), Postives = 177/222 (79.73%), Query Frame = 1


Query: 26  SPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQINTQLNDSNSELTIFAPTDNA 85
           +PA AP PP P N+++ILEK GQF++ IRLLK+T VANQ+  QLN++N+ +TIFAPTDNA
Sbjct: 32  APALAPAPPGPTNVTKILEKAGQFTLFIRLLKATAVANQLLGQLNNTNNGMTIFAPTDNA 91

Query: 86  FSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNPNSGRRVSNPVRTQAGDAYE 145
           FS+L+SGTLNSL+D++KVEL+QFH+IPT+LS + FQT+SNP         +RTQAGD+ +
Sbjct: 92  FSSLKSGTLNSLSDEQKVELVQFHIIPTYLSSTQFQTISNP---------LRTQAGDSAD 151

Query: 146 --FPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGIFQPRPPPPAPA 205
             FPLNVTTSGNSVN+++GLTNTS+SGT+Y+D QLAVYQ+D VL+P+ IF PRPP PAPA
Sbjct: 152 GKFPLNVTTSGNSVNITTGLTNTSVSGTIYTDGQLAVYQVDKVLQPLQIFDPRPPAPAPA 211

Query: 206 PEKSKKKAKAISEDPKDSTNDNSSAV-PLAGMSAFFTGAAAV 245
           P KSKKKA A+++ P D+  DNS AV  L   +  F G +A+
Sbjct: 212 PAKSKKKA-AVADSPDDTPADNSKAVSTLTMQNVVFWGVSAI 243

[Close]

BLAST of Cp4.1LG20g08990 vs. TrEMBL
Match: A9PAK7_POPTR (Fasciclin-like AGP 15 family protein OS=Populus trichocarpa GN=POPTR_0012s14510g PE=2 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 2.8e-64
Identity = 144/241 (59.75%), Postives = 180/241 (74.69%), Query Frame = 1


Query: 8   FSLVIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQINT 67
           FSL++ FL L    +  QSPA APGPP P N+++ILEKGGQFS+ IRLLK+TQ    +N 
Sbjct: 9   FSLILSFL-LHCPPTLAQSPAAAPGPPGPTNVTKILEKGGQFSVFIRLLKATQEDVTLNG 68

Query: 68  QLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNPN 127
           QLN++N+ +TIFAP+DNAFS+L+SGTLNSLNDQEK EL+QFH+IP +LS S FQT     
Sbjct: 69  QLNNTNNAITIFAPSDNAFSSLKSGTLNSLNDQEKAELVQFHIIPQYLSSSQFQT----- 128

Query: 128 SGRRVSNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVL 187
               VSNP+ TQAG      LNVTT+GNSVN+++GLTNTS+SGT+Y+DNQLAVYQ+D VL
Sbjct: 129 ----VSNPLTTQAGSGGRLELNVTTTGNSVNITTGLTNTSVSGTIYTDNQLAVYQVDKVL 188

Query: 188 KPIGIFQPRPPPPAPAPEKSKKKAKAISEDPKDSTNDNSSAVPLAGMS-AFFTGAAAVAG 247
            P+ IF P+PP PAPAPEK KK++KA +E P D+  DNS AV L  ++   F G   VA 
Sbjct: 189 LPVDIFTPKPPTPAPAPEKPKKRSKA-AESP-DAPEDNSGAVSLTVLNDVVFFGVGIVAA 237

[Close]

BLAST of Cp4.1LG20g08990 vs. TrEMBL
Match: A9XTK6_GOSHI (Arabinogalactan protein 2 OS=Gossypium hirsutum GN=FLA1 PE=2 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.8e-63
Identity = 139/246 (56.50%), Postives = 182/246 (73.98%), Query Frame = 1


Query: 3   IMNSLFSLVIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVA 62
           +  +L  L++F L      +  QSPA AP P  P N+++ILEK GQF++ IRLLKSTQVA
Sbjct: 6   VFTTLTLLILFSLSCST--TLAQSPALAPAPSGPTNVTKILEKAGQFTLFIRLLKSTQVA 65

Query: 63  NQINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT 122
           NQ+  QLN+SN+ +T+FAPTDNAFS+L+SGTLNSL D++KV+L+QFH++PT+L+ S FQT
Sbjct: 66  NQLLGQLNNSNNGMTVFAPTDNAFSSLKSGTLNSLTDEQKVQLVQFHIVPTYLTSSQFQT 125

Query: 123 VSNPNSGRRVSNPVRTQAGDAYE--FPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAV 182
                    +SNP+RTQAGD+ +  FPLNVTTSGNSVN+++GLTNTS+SGT+Y+D QLAV
Sbjct: 126 ---------ISNPLRTQAGDSGDGKFPLNVTTSGNSVNITTGLTNTSVSGTIYTDGQLAV 185

Query: 183 YQIDSVLKPIGIFQPRPPPPAPAPEKSK-KKAKAISEDPKDSTNDNSSAVPLAGMSAFFT 242
           YQID VL+P+ IF PRPP PAPAP KSK KKA  +++ P  +  DNS A  L  +  F  
Sbjct: 186 YQIDQVLQPLQIFAPRPPAPAPAPAKSKNKKATTVADSPDVTPADNSKAATLQNVGLFGV 240

Query: 243 GAAAVA 246
            A  +A
Sbjct: 246 AALVIA 240

[Close]

BLAST of Cp4.1LG20g08990 vs. TrEMBL
Match: Q7Y250_GOSHI (Arabinogalactan protein OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 2.3e-63
Identity = 138/246 (56.10%), Postives = 182/246 (73.98%), Query Frame = 1


Query: 3   IMNSLFSLVIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVA 62
           +  +L  L++F L      +  Q+PA AP P  P N+++ILEK GQF++ IRLLKSTQVA
Sbjct: 6   VFTTLTLLILFSLSCST--TLAQAPALAPAPSGPTNVTKILEKAGQFTLFIRLLKSTQVA 65

Query: 63  NQINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT 122
           NQ+  QLN+SN+ +T+FAPTDNAFS+L+SGTLNSL D++KVEL+QFH++PT+L+ S FQT
Sbjct: 66  NQLLGQLNNSNNGMTVFAPTDNAFSSLKSGTLNSLTDEQKVELVQFHIVPTYLTSSQFQT 125

Query: 123 VSNPNSGRRVSNPVRTQAGDAYE--FPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAV 182
                    +SNP+RTQAGD+ +  FPLN+TTSGNSVN+++GLTNTS+SGT+Y+D QLAV
Sbjct: 126 ---------ISNPLRTQAGDSGDGKFPLNITTSGNSVNITTGLTNTSVSGTIYTDGQLAV 185

Query: 183 YQIDSVLKPIGIFQPRPPPPAPAPEKSK-KKAKAISEDPKDSTNDNSSAVPLAGMSAFFT 242
           YQID VL+P+ IF PRPP PAPAP KSK KKA  +++ P  +  DNS A  L  +  F  
Sbjct: 186 YQIDQVLQPLQIFAPRPPAPAPAPAKSKNKKATTVADSPDVTPADNSKAATLQNVGLFGV 240

Query: 243 GAAAVA 246
            A  +A
Sbjct: 246 AALVIA 240

[Close]

BLAST of Cp4.1LG20g08990 vs. TAIR10
Match: AT5G60490.1 (AT5G60490.1 FASCICLIN-like arabinogalactan-protein 12)

HSP 1 Score: 231.5 bits (589), Expect = 5.7e-61
Identity = 122/205 (59.51%), Postives = 162/205 (79.02%), Query Frame = 1


Query: 26  SPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQINTQLNDSNSELTIFAPTDNA 85
           SPA AP PP P N+++ILEK GQF++ IRLLKST VANQ+  QLN+S++ +TIFAP+D++
Sbjct: 27  SPAVAPAPPGPTNVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNSDNGITIFAPSDSS 86

Query: 86  FSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNPNSGRRVSNPVRTQAGDAYE 145
           F+ L++GTLNSL D+++VEL+QFH+IP+++S SNFQT+SNP         +RTQAGD+ +
Sbjct: 87  FTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSNFQTISNP---------LRTQAGDSAD 146

Query: 146 --FPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGIFQPRPPPPAPA 205
             FPLNVTTSGN+VN++SG+TNT++SG VYSD QLAVYQ+D VL P  +F PRPP PAPA
Sbjct: 147 GHFPLNVTTSGNTVNITSGVTNTTVSGNVYSDGQLAVYQVDKVLLPQQVFDPRPPAPAPA 206

Query: 206 PEKSKKKAKAISEDPKDSTNDNSSA 229
           P  SK K K   +D  DS++D+S A
Sbjct: 207 PSVSKSKKK---KDDSDSSSDDSPA 219

[Close]

BLAST of Cp4.1LG20g08990 vs. TAIR10
Match: AT5G03170.1 (AT5G03170.1 FASCICLIN-like arabinogalactan-protein 11)

HSP 1 Score: 208.4 bits (529), Expect = 5.2e-54
Identity = 121/240 (50.42%), Postives = 168/240 (70.00%), Query Frame = 1


Query: 12  IFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQINTQLND 71
           +F  +L +  +YGQ+PA  PGP  P NI+ ILEK GQF++ IRLLKSTQ ++QINTQLN 
Sbjct: 12  LFIFFLVIATTYGQAPA--PGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNS 71

Query: 72  SNSE-LTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNPNSGR 131
           S+S  LT+FAPTDNAF++L+SGTLNSL+DQ+KV+L+QFH++PT +++  FQT        
Sbjct: 72  SSSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQT-------- 131

Query: 132 RVSNPVRTQAGDAY--EFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLK 191
            VSNP+RTQAGD    +FPLN+T+SGN VN+++G+ + +++ +VYSD QLAVYQ+D VL 
Sbjct: 132 -VSNPLRTQAGDGQNGKFPLNITSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLL 191

Query: 192 PIGIFQPRPPPPAPAPEKSKKKAKAIS---EDPKDSTNDNSSAVPLAGMSAFFTGAAAVA 246
           P+ +F      PAPAPEK    +K  +   +D  DST+ + +     G     T  AA+A
Sbjct: 192 PLAMF-GSSVAPAPAPEKGGSVSKGSASGGDDGGDSTDSSDAERTGFGFGIRITTVAAIA 239

[Close]

BLAST of Cp4.1LG20g08990 vs. TAIR10
Match: AT5G44130.1 (AT5G44130.1 FASCICLIN-like arabinogalactan protein 13 precursor)

HSP 1 Score: 152.9 bits (385), Expect = 2.6e-37
Identity = 96/221 (43.44%), Postives = 133/221 (60.18%), Query Frame = 1


Query: 25  QSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQINTQLNDSNSELTIFAPTDN 84
           Q  A APGP  P+NI+ ILEKGGQF  LIRLL +TQ+ NQIN Q+N S+  +T+ APTDN
Sbjct: 23  QRAAPAPGPAGPINITAILEKGGQFVTLIRLLNTTQIGNQINIQINSSSEGMTVLAPTDN 82

Query: 85  AFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNPNSGRRVSNPVRTQAGD-- 144
           AF NL+ GTLN L+  ++V+L+ +H+ P F +L +  +VSNP         VRTQA    
Sbjct: 83  AFQNLKPGTLNKLSPDDQVKLILYHVSPKFYTLEDLLSVSNP---------VRTQASGRD 142

Query: 145 -AYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGIFQPR----- 204
               + LN T  GN VNVS+G+  T +S ++  +  LAVY +D VL P  +F  R     
Sbjct: 143 VGGVYGLNFTGQGNQVNVSTGVVETRLSTSLRQERPLAVYVVDMVLLPEEMFGERKISPM 202

Query: 205 -PPPPAPAPE-----KSKKKAKAISEDPKDSTNDNSSAVPL 232
            PPP + +P+     +S KKA A SE  K  + + ++ + L
Sbjct: 203 APPPKSKSPDVSDDSESSKKAAAPSESEKSGSGEMNTGLGL 234

[Close]

BLAST of Cp4.1LG20g08990 vs. TAIR10
Match: AT2G20520.1 (AT2G20520.1 FASCICLIN-like arabinogalactan 6)

HSP 1 Score: 141.7 bits (356), Expect = 5.9e-34
Identity = 100/233 (42.92%), Postives = 135/233 (57.94%), Query Frame = 1


Query: 5   NSLFSLVIFFLYLFVGGSYGQSPAEAPGPPP---PMNISRILEKGGQFSILIRLLKSTQV 64
           +SLFS V+  ++LF    Y QS   AP P     P+N++ ILE G QF+ LI+LL +TQV
Sbjct: 3   SSLFSYVVLLIFLFTI-PYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQV 62

Query: 65  ANQINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQ 124
             Q++ QLN S+  +TIFAPTDNAF+ L+ GTLNSL  Q++++L+ +H+IP + SLS+  
Sbjct: 63  GFQVSVQLNSSDQGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSDLL 122

Query: 125 TVSNPNSGRRVSNPVRTQA--GDAYEFPLNVT--TSGNSVNVSSGLTNTSISGTVYSDNQ 184
                      SNPVRTQA   D   F LN T     N VNVS+G+  T I+  +     
Sbjct: 123 L---------ASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFP 182

Query: 185 LAVYQIDSVLKPIGIFQPRPPPP-APAPEKSKKKAKAISEDPKDSTNDNSSAV 230
           LAVY +DSVL P  +F  +  P  APAP+ S   + A S    D      S+V
Sbjct: 183 LAVYVVDSVLLPEELFGTKTTPTGAPAPKSSTSSSDADSPAADDEHKSAGSSV 225

[Close]

BLAST of Cp4.1LG20g08990 vs. TAIR10
Match: AT1G03870.1 (AT1G03870.1 FASCICLIN-like arabinoogalactan 9)

HSP 1 Score: 138.7 bits (348), Expect = 5.0e-33
Identity = 88/215 (40.93%), Postives = 127/215 (59.07%), Query Frame = 1


Query: 6   SLFSLVIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQI 65
           +L  L++    L    +  Q  A AP P  P+N++ ILEKGGQF+  I LL  TQV +Q+
Sbjct: 7   TLAPLLLIAAVLLATKATAQPAAPAPEPAGPINLTAILEKGGQFTTFIHLLNITQVGSQV 66

Query: 66  NTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSN 125
           N Q+N S+  +T+FAPTDNAF NL+ GTLN L+  ++V+L+ +H+ P + S+ +  +   
Sbjct: 67  NIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQLSPDDQVKLILYHVSPKYYSMDDLLS--- 126

Query: 126 PNSGRRVSNPVRTQAG--DAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQI 185
                 VSNPVRTQA   D   + LN T   N +NVS+G   T IS ++     LAVY +
Sbjct: 127 ------VSNPVRTQASGRDNGVYGLNFTGQTNQINVSTGYVETRISNSLRQQRPLAVYVV 186

Query: 186 DSVLKPIGIF-QPRPPPPAPAPEKSKKKAKAISED 218
           D VL P  +F + +  P APAP   K K+  +++D
Sbjct: 187 DMVLLPGEMFGEHKLSPIAPAP---KSKSGGVTDD 209

[Close]

BLAST of Cp4.1LG20g08990 vs. NCBI nr
Match: gi|659072184|ref|XP_008463798.1| (PREDICTED: fasciclin-like arabinogalactan protein 12 [Cucumis melo])

HSP 1 Score: 396.7 bits (1018), Expect = 2.9e-107
Identity = 209/245 (85.31%), Postives = 223/245 (91.02%), Query Frame = 1


Query: 5   NSLFSLVIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQ 64
           NSLFSLVI  ++ F+  SYGQSPAEAPGPPPPMNIS+ILEKGGQF++LIRLLKSTQVANQ
Sbjct: 3   NSLFSLVILLIFFFIDCSYGQSPAEAPGPPPPMNISKILEKGGQFNVLIRLLKSTQVANQ 62

Query: 65  INTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVS 124
           INTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT  
Sbjct: 63  INTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT-- 122

Query: 125 NPNSGRRVSNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQID 184
                  +SNPVRTQAGDAYEFPLNVTTSGNSVN+SSGL NTSISGTVY+DNQLA+YQID
Sbjct: 123 -------ISNPVRTQAGDAYEFPLNVTTSGNSVNISSGLVNTSISGTVYTDNQLAIYQID 182

Query: 185 SVLKPIGIFQPRPPPPAPAPEKSKKKAKAISEDPKDSTNDNSSAVPLAGMSAFFTGAAAV 244
           SVLKPIG+FQPRPPPPAPAPEKSKKKAK ISE PKDS +DNSSAVPLAG+S+F T AA V
Sbjct: 183 SVLKPIGVFQPRPPPPAPAPEKSKKKAKGISESPKDSDDDNSSAVPLAGISSFSTEAAVV 238

Query: 245 AGIML 250
            GIML
Sbjct: 243 VGIML 238

[Close]

BLAST of Cp4.1LG20g08990 vs. NCBI nr
Match: gi|449462077|ref|XP_004148768.1| (PREDICTED: fasciclin-like arabinogalactan protein 12 [Cucumis sativus])

HSP 1 Score: 391.0 bits (1003), Expect = 1.6e-105
Identity = 206/245 (84.08%), Postives = 221/245 (90.20%), Query Frame = 1


Query: 5   NSLFSLVIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQ 64
           NSLFSLVI  ++ F+  SYGQSPAEAPGPPPPMNI++ILEKGGQF++LIRLLK+TQVANQ
Sbjct: 3   NSLFSLVILLIFFFLDCSYGQSPAEAPGPPPPMNITKILEKGGQFNVLIRLLKNTQVANQ 62

Query: 65  INTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVS 124
           INTQLNDSNSELT+FAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT  
Sbjct: 63  INTQLNDSNSELTLFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT-- 122

Query: 125 NPNSGRRVSNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQID 184
                  +SNPVRTQAGDAYEFPLNVTTSGNSVNVSSGL NTSISGTVY+DNQLA+YQID
Sbjct: 123 -------ISNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYTDNQLAIYQID 182

Query: 185 SVLKPIGIFQPRPPPPAPAPEKSKKKAKAISEDPKDSTNDNSSAVPLAGMSAFFTGAAAV 244
           SVLKPIG+FQPRPPPPAPAPEKSKKKAK  SE PKDS +DNSSAVPLAG+S   TGAA V
Sbjct: 183 SVLKPIGVFQPRPPPPAPAPEKSKKKAKGNSESPKDSDDDNSSAVPLAGVSVISTGAAVV 238

Query: 245 AGIML 250
            GIML
Sbjct: 243 VGIML 238

[Close]

BLAST of Cp4.1LG20g08990 vs. NCBI nr
Match: gi|1009115649|ref|XP_015874343.1| (PREDICTED: fasciclin-like arabinogalactan protein 12 [Ziziphus jujuba])

HSP 1 Score: 258.8 bits (660), Expect = 9.5e-66
Identity = 146/250 (58.40%), Postives = 187/250 (74.80%), Query Frame = 1


Query: 1   MKIMNSLFSLVIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQ 60
           MK+ +   SL++ FL+     S GQ+PA +PGP  P++I +IL K GQF+ILIRLL+STQ
Sbjct: 1   MKMPHFTLSLLLLFLFHCTTIS-GQAPAASPGPAAPLDIYKILTKAGQFTILIRLLRSTQ 60

Query: 61  VANQINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNF 120
           V NQIN+QL DSNSELT FAPTDNAFS+L++GTLNSL+DQ+KV L+QFH+IP+F+S+SNF
Sbjct: 61  VGNQINSQLGDSNSELTFFAPTDNAFSSLKTGTLNSLSDQQKVMLVQFHLIPSFISISNF 120

Query: 121 QTVSNPNSGRRVSNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAV 180
           QT+SNP         V+TQA + YEFPLN+TTSG+ VN+++GL NTSISGTVYSDNQLAV
Sbjct: 121 QTMSNP---------VQTQASNTYEFPLNITTSGSQVNITTGLVNTSISGTVYSDNQLAV 180

Query: 181 YQIDSVLKPIGIFQPR--PPPPAPAPEKSKKKAKAISEDPKDSTNDNSSAVPLAGMSAFF 240
           YQ++ VL+P+GIF PR  PP PAPAP KSKKK+   S+ P  S  D S AV +       
Sbjct: 181 YQVEKVLQPLGIFAPRSLPPAPAPAPPKSKKKSATSSDSPVASV-DASGAVGVTRNVLVS 239

Query: 241 TGAAAVAGIM 249
            G + V  ++
Sbjct: 241 VGVSIVVSVL 239

[Close]

BLAST of Cp4.1LG20g08990 vs. NCBI nr
Match: gi|590585366|ref|XP_007015428.1| (FASCICLIN-like arabinogalactan-protein 11 [Theobroma cacao])

HSP 1 Score: 253.8 bits (647), Expect = 3.0e-64
Identity = 136/222 (61.26%), Postives = 177/222 (79.73%), Query Frame = 1


Query: 26  SPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQINTQLNDSNSELTIFAPTDNA 85
           +PA AP PP P N+++ILEK GQF++ IRLLK+T VANQ+  QLN++N+ +TIFAPTDNA
Sbjct: 32  APALAPAPPGPTNVTKILEKAGQFTLFIRLLKATAVANQLLGQLNNTNNGMTIFAPTDNA 91

Query: 86  FSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNPNSGRRVSNPVRTQAGDAYE 145
           FS+L+SGTLNSL+D++KVEL+QFH+IPT+LS + FQT+SNP         +RTQAGD+ +
Sbjct: 92  FSSLKSGTLNSLSDEQKVELVQFHIIPTYLSSTQFQTISNP---------LRTQAGDSAD 151

Query: 146 --FPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGIFQPRPPPPAPA 205
             FPLNVTTSGNSVN+++GLTNTS+SGT+Y+D QLAVYQ+D VL+P+ IF PRPP PAPA
Sbjct: 152 GKFPLNVTTSGNSVNITTGLTNTSVSGTIYTDGQLAVYQVDKVLQPLQIFDPRPPAPAPA 211

Query: 206 PEKSKKKAKAISEDPKDSTNDNSSAV-PLAGMSAFFTGAAAV 245
           P KSKKKA A+++ P D+  DNS AV  L   +  F G +A+
Sbjct: 212 PAKSKKKA-AVADSPDDTPADNSKAVSTLTMQNVVFWGVSAI 243

[Close]

BLAST of Cp4.1LG20g08990 vs. NCBI nr
Match: gi|743856642|ref|XP_011029966.1| (PREDICTED: fasciclin-like arabinogalactan protein 12 [Populus euphratica])

HSP 1 Score: 253.4 bits (646), Expect = 4.0e-64
Identity = 144/241 (59.75%), Postives = 180/241 (74.69%), Query Frame = 1


Query: 8   FSLVIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQINT 67
           FSL++ FL L    +  QSPA APGPP P N+++ILEKGGQFS+ IRLLK+TQ    +N 
Sbjct: 9   FSLILSFL-LHCPPTLAQSPAAAPGPPGPANVTKILEKGGQFSVFIRLLKATQEDVTLNG 68

Query: 68  QLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNPN 127
           QLN++N+ +TIFAP+DNAFS+L+SGTLNSLNDQEK EL+QFH+IP +LS S FQT     
Sbjct: 69  QLNNTNNAITIFAPSDNAFSSLKSGTLNSLNDQEKAELVQFHIIPQYLSSSQFQT----- 128

Query: 128 SGRRVSNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVL 187
               VSNP+ TQAG      LNVTT+GNSVN+++GLTNTS+SGT+Y+DNQLAVYQ+D VL
Sbjct: 129 ----VSNPLTTQAGSGGRLELNVTTTGNSVNITTGLTNTSVSGTIYTDNQLAVYQVDKVL 188

Query: 188 KPIGIFQPRPPPPAPAPEKSKKKAKAISEDPKDSTNDNSSAVPLAGMS-AFFTGAAAVAG 247
            P+ IF P+PP PAPAPEK KK++KA +E P D+  DNS AV L  ++   F G   VA 
Sbjct: 189 LPVDIFTPKPPTPAPAPEKPKKRSKA-AESP-DAPEDNSGAVSLTVLNDVVFFGVGIVAA 237

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g08990 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FLA12_ARATH	1.0e-59	59.51	Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana GN=FLA12 PE=2 ...	[more]
FLA11_ARATH	9.2e-53	50.42	Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana GN=FLA11 PE=2 ...	[more]
FLA13_ARATH	4.6e-36	43.44	Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana GN=FLA13 PE=1 ...	[more]
FLA6_ARATH	1.1e-32	42.92	Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana GN=FLA6 PE=2 SV...	[more]
FLA9_ARATH	8.9e-32	40.93	Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana GN=FLA9 PE=1 SV...	[more]

BLAST of Cp4.1LG20g08990 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVA0_CUCSA	1.1e-105	84.08	Arabinogalactan protein 2 OS=Cucumis sativus GN=Csa_1G085380 PE=4 SV=1	[more]
A0A061GV39_THECC	2.1e-64	61.26	FASCICLIN-like arabinogalactan-protein 11 OS=Theobroma cacao GN=TCM_041052 PE=4 ...	[more]
A9PAK7_POPTR	2.8e-64	59.75	Fasciclin-like AGP 15 family protein OS=Populus trichocarpa GN=POPTR_0012s14510g...	[more]
A9XTK6_GOSHI	1.8e-63	56.50	Arabinogalactan protein 2 OS=Gossypium hirsutum GN=FLA1 PE=2 SV=1	[more]
Q7Y250_GOSHI	2.3e-63	56.10	Arabinogalactan protein OS=Gossypium hirsutum PE=2 SV=1	[more]

BLAST of Cp4.1LG20g08990 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G60490.1	5.7e-61	59.51	FASCICLIN-like arabinogalactan-protein 12	[more]
AT5G03170.1	5.2e-54	50.42	FASCICLIN-like arabinogalactan-protein 11	[more]
AT5G44130.1	2.6e-37	43.44	FASCICLIN-like arabinogalactan protein 13 precursor	[more]
AT2G20520.1	5.9e-34	42.92	FASCICLIN-like arabinogalactan 6	[more]
AT1G03870.1	5.0e-33	40.93	FASCICLIN-like arabinoogalactan 9	[more]

BLAST of Cp4.1LG20g08990 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659072184\|ref\|XP_008463798.1\|	2.9e-107	85.31	PREDICTED: fasciclin-like arabinogalactan protein 12 [Cucumis melo]	[more]
gi\|449462077\|ref\|XP_004148768.1\|	1.6e-105	84.08	PREDICTED: fasciclin-like arabinogalactan protein 12 [Cucumis sativus]	[more]
gi\|1009115649\|ref\|XP_015874343.1\|	9.5e-66	58.40	PREDICTED: fasciclin-like arabinogalactan protein 12 [Ziziphus jujuba]	[more]
gi\|590585366\|ref\|XP_007015428.1\|	3.0e-64	61.26	FASCICLIN-like arabinogalactan-protein 11 [Theobroma cacao]	[more]
gi\|743856642\|ref\|XP_011029966.1\|	4.0e-64	59.75	PREDICTED: fasciclin-like arabinogalactan protein 12 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000782	FAS1_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009834	plant-type secondary cell wall biogenesis
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009733	response to auxin
biological_process	GO:0009735	response to cytokinin
biological_process	GO:0009739	response to gibberellin
biological_process	GO:0009651	response to salt stress
biological_process	GO:0090376	seed trichome differentiation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG20g08990.1	Cp4.1LG20g08990.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000782	FAS1 domain	GENE3D	G3DSA:2.30.180.10		coord: 37..189 score: 4.6
IPR000782	FAS1 domain	PFAM	PF02469	Fasciclin	coord: 48..189 score: 2.5
IPR000782	FAS1 domain	SMART	SM00554	fasc_3	coord: 77..190 score: 3.0
IPR000782	FAS1 domain	PROFILE	PS50213	FAS1	coord: 36..187 score: 20
IPR000782	FAS1 domain	unknown	SSF82153	FAS1 domain	coord: 31..189 score: 2.35
None	No IPR available	PANTHER	PTHR32077	FAMILY NOT NAMED	coord: 1..249 score: 1.9E
None	No IPR available	PANTHER	PTHR32077:SF10	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 12	coord: 1..249 score: 1.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG20g08990	Cucsa.207270	Cucumber (Gy14) v1	cgycpeB0582
Cp4.1LG20g08990	CmaCh13G001840	Cucurbita maxima (Rimu)	cmacpeB235
Cp4.1LG20g08990	CmaCh01G005390	Cucurbita maxima (Rimu)	cmacpeB483
Cp4.1LG20g08990	CmoCh01G005690	Cucurbita moschata (Rifu)	cmocpeB441
Cp4.1LG20g08990	CmoCh13G001870	Cucurbita moschata (Rifu)	cmocpeB202
Cp4.1LG20g08990	Cla005042	Watermelon (97103) v1	cpewmB507
Cp4.1LG20g08990	Csa1G085380	Cucumber (Chinese Long) v2	cpecuB516
Cp4.1LG20g08990	MELO3C005051	Melon (DHL92) v3.5.1	cpemeB479
Cp4.1LG20g08990	ClCG03G002250	Watermelon (Charleston Gray)	cpewcgB467
Cp4.1LG20g08990	CSPI01G12740	Wild cucumber (PI 183967)	cpecpiB518
Cp4.1LG20g08990	Lsi02G014260	Bottle gourd (USVL1VR-Ls)	cpelsiB422
Cp4.1LG20g08990	MELO3C005051.2	Melon (DHL92) v3.6.1	cpemedB561
Cp4.1LG20g08990	CsaV3_1G012930	Cucumber (Chinese Long) v3	cpecucB0635
Cp4.1LG20g08990	Bhi08G000270	Wax gourd	cpewgoB0636
Cp4.1LG20g08990	CsGy1G012780	Cucumber (Gy14) v2	cgybcpeB084
Cp4.1LG20g08990	Carg21061	Silver-seed gourd	carcpeB1022
Cp4.1LG20g08990	Carg12314	Silver-seed gourd	carcpeB0620

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG20g08990	Cp4.1LG19g04040	Cucurbita pepo (Zucchini)	cpecpeB413
Cp4.1LG20g08990	Cp4.1LG02g12840	Cucurbita pepo (Zucchini)	cpecpeB432

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG20g08990	Wax gourd	cpewgoB0628
Cp4.1LG20g08990	Wax gourd	cpewgoB0657
Cp4.1LG20g08990	Cucurbita pepo (Zucchini)	cpecpeB296
Cp4.1LG20g08990	Cucurbita pepo (Zucchini)	cpecpeB386
Cp4.1LG20g08990	Cucurbita pepo (Zucchini)	cpecpeB388
Cp4.1LG20g08990	Watermelon (Charleston Gray)	cpewcgB462
Cp4.1LG20g08990	Melon (DHL92) v3.5.1	cpemeB469
Cp4.1LG20g08990	Cucumber (Gy14) v2	cgybcpeB817
Cp4.1LG20g08990	Silver-seed gourd	carcpeB0469
Cp4.1LG20g08990	Cucumber (Chinese Long) v3	cpecucB0651