CmaCh13G001840 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh13G001840
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionFASCICLIN-like arabinogalactan-protein 11
LocationCma_Chr13 : 1405013 .. 1406918 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTTTGTATAAAAAGCCCCTTTGGCTCCTTTCCACTTCGCCACCAAAATAATCTTCATTTTTGGTGTTTTTGGCGATCGAGAGGGAAGGATCATGAATACCCTCTTCTCTCTCATAATCTTCTTTCTCTACCTCTTCGTTGGTGGCAGTTTTGGGCAGTCGCCGGCGGAGGCTCCGGGACCGCCGCCGCCGATGAATATATCAAGAATACTGGAAAAGGGTGGGCAGTTCAGTATTCTGATAAGGCTTTTGAAGAGCACTCAAGTGGCCAACCAAATCAACACTCAGCTTAATGACTCCAATTCTGAACTCACCATTTTTGCCCCCACTGATAATGCTTTCTCCAACCTCCAATCGGGTACCATTTATTTTATTTTATTTTTATTTTTTATTTCCCTCAATATATAATTATTTAATTTAATTAGTATTAGTTATTTCTTTCGTTGATAATAAATTATTTTAATATTTGATTTTGGATCATTTCTATTTTCTTATAAAGTTACCTATAAAAAAAAAGTAAATTGTTTTAATAAATTTAATAATTTTTATAAAGAAAAATATAAATGAAATGGGTCGGGTTTGGGGTAGAGGTTAAGGATGTTGACGAGATGTAAGATCCCACATCGGTTGGGGAGGAAAACAAAACATTTTGTATAAAGATGTGAAAACTTCTCCCTACTAGACATTTTTAAAATTTTAAGGGAAAACCCGAAAGAAAAAGCTCAATGAAGACAATATTTGCTAGCAGTAGGCTTAAGTTGTTACAAATGGTATCAGAGCCTGACACTAGGCGGTGTGCTAGTAACGAGGTTGAGCCCCAAAGGGGATGGACACAAGGCAGTGTACTAGCAAGGATGCTGGGCCCCGAATAGGGTAGATAGGGGGGACACGAGGCAATGTGCCAGCAAGGATGCTGGGACCCGAAAAAGGTAGATTAGGGGGCCCACATCGATTGGAGAAAGTAACGAGTATCAGCAAGGATGTTGAGCCCTAAAAGGGTGGATTATAAGATCCCACATCCATTGGGTGAGGATGCTGACCTCGAAGGGAGGTAGATTGTCTCTACTAACAAAAAAATACACTAGAAATATAATCTCTACTTCCGACTCCGACTTCTTAGCTACTAAAGAAGAATCTCGACTTCTTCCCGTACTAAAGAAGAATCTTTTTTCTTTATTTAAGCCGAAATTTTGGTATGCTATTTATTTTAAATAGATGAAATAATTGAATGATTGATGAATACAAAACAGGCACACTCAACTCCCTCAACGACCAAGAAAAGGTAGAGCTTCTCCAATTCCACATGATCCCAACCTTCCTCTCTCTCTCAAACTTCCAAACAGTCAGCAATCCGGTGAGAACTCAGGCTGGCGACGCCTATGAGTTCCCTCTCAACGTCACCACCTCCGGCAACTCTGTCAACGTCTCCTCCGGCCTCACCAACACCTCCATCTCGGGCACCGTCTACTCCGACAACCAGCTCGCCGTCTACCAGATCGACTCAGTTCTCAAGCCAATTGGCGTCTTCCAGCCCCGCCCACCACCCCCTGCTCCCGCGCCGGAGAAGTCTAAGAAGAAGGCCAAGGCCATTTCTGAGGATCCCAAGGATTCGACCGATGACAACTCCTCCGCCGTTCCACTTACCGGAATGCCGGTCTTCTTCACCGGAGCTGCCGCCGTCGCCGGAATAATGCTGGTATGGATAAATACCTGATCTAATTTTCAAGGTGTATTGTGGGAGAACTTTCATCTATTGCTTTTGAAATTGGTTTTATTTCTGTATTATAAATTGATGTTCGATTGTGTTTGTTTTTTCTGTTTAAAGTTTGTGTTAAATTTATTTTAAGAATCTTTATGAGAAAAATTGTATGATACTTTTTTTATTAAAAGATTTTGTTAGAATTATT

mRNA sequence

GCTTTGTATAAAAAGCCCCTTTGGCTCCTTTCCACTTCGCCACCAAAATAATCTTCATTTTTGGTGTTTTTGGCGATCGAGAGGGAAGGATCATGAATACCCTCTTCTCTCTCATAATCTTCTTTCTCTACCTCTTCGTTGGTGGCAGTTTTGGGCAGTCGCCGGCGGAGGCTCCGGGACCGCCGCCGCCGATGAATATATCAAGAATACTGGAAAAGGGTGGGCAGTTCAGTATTCTGATAAGGCTTTTGAAGAGCACTCAAGTGGCCAACCAAATCAACACTCAGCTTAATGACTCCAATTCTGAACTCACCATTTTTGCCCCCACTGATAATGCTTTCTCCAACCTCCAATCGGGCACACTCAACTCCCTCAACGACCAAGAAAAGGTAGAGCTTCTCCAATTCCACATGATCCCAACCTTCCTCTCTCTCTCAAACTTCCAAACAGTCAGCAATCCGGTGAGAACTCAGGCTGGCGACGCCTATGAGTTCCCTCTCAACGTCACCACCTCCGGCAACTCTGTCAACGTCTCCTCCGGCCTCACCAACACCTCCATCTCGGGCACCGTCTACTCCGACAACCAGCTCGCCGTCTACCAGATCGACTCAGTTCTCAAGCCAATTGGCGTCTTCCAGCCCCGCCCACCACCCCCTGCTCCCGCGCCGGAGAAGTCTAAGAAGAAGGCCAAGGCCATTTCTGAGGATCCCAAGGATTCGACCGATGACAACTCCTCCGCCGTTCCACTTACCGGAATGCCGGTCTTCTTCACCGGAGCTGCCGCCGTCGCCGGAATAATGCTGGTATGGATAAATACCTGATCTAATTTTCAAGGTGTATTGTGGGAGAACTTTCATCTATTGCTTTTGAAATTGGTTTTATTTCTGTATTATAAATTGATGTTCGATTGTGTTTGTTTTTTCTGTTTAAAGTTTGTGTTAAATTTATTTTAAGAATCTTTATGAGAAAAATTGTATGATACTTTTTTTATTAAAAGATTTTGTTAGAATTATT

Coding sequence (CDS)

ATGAATACCCTCTTCTCTCTCATAATCTTCTTTCTCTACCTCTTCGTTGGTGGCAGTTTTGGGCAGTCGCCGGCGGAGGCTCCGGGACCGCCGCCGCCGATGAATATATCAAGAATACTGGAAAAGGGTGGGCAGTTCAGTATTCTGATAAGGCTTTTGAAGAGCACTCAAGTGGCCAACCAAATCAACACTCAGCTTAATGACTCCAATTCTGAACTCACCATTTTTGCCCCCACTGATAATGCTTTCTCCAACCTCCAATCGGGCACACTCAACTCCCTCAACGACCAAGAAAAGGTAGAGCTTCTCCAATTCCACATGATCCCAACCTTCCTCTCTCTCTCAAACTTCCAAACAGTCAGCAATCCGGTGAGAACTCAGGCTGGCGACGCCTATGAGTTCCCTCTCAACGTCACCACCTCCGGCAACTCTGTCAACGTCTCCTCCGGCCTCACCAACACCTCCATCTCGGGCACCGTCTACTCCGACAACCAGCTCGCCGTCTACCAGATCGACTCAGTTCTCAAGCCAATTGGCGTCTTCCAGCCCCGCCCACCACCCCCTGCTCCCGCGCCGGAGAAGTCTAAGAAGAAGGCCAAGGCCATTTCTGAGGATCCCAAGGATTCGACCGATGACAACTCCTCCGCCGTTCCACTTACCGGAATGCCGGTCTTCTTCACCGGAGCTGCCGCCGTCGCCGGAATAATGCTGGTATGGATAAATACCTGA

Protein sequence

MNTLFSLIIFFLYLFVGGSFGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGVFQPRPPPPAPAPEKSKKKAKAISEDPKDSTDDNSSAVPLTGMPVFFTGAAAVAGIMLVWINT
Homology
[Close]
BLAST of CmaCh13G001840 vs. Swiss-Prot
Match: FLA12_ARATH (Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana GN=FLA12 PE=2 SV=2)

HSP 1 Score: 239.2 bits (609), Expect = 4.7e-62
Identity = 123/196 (62.76%), Postives = 161/196 (82.14%), Query Frame = 1 

Query: 23  SPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQINTQLNDSNSELTIFAPTDNA 82
           SPA AP PP P N+++ILEK GQF++ IRLLKST VANQ+  QLN+S++ +TIFAP+D++
Sbjct: 27  SPAVAPAPPGPTNVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNSDNGITIFAPSDSS 86

Query: 83  FSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNPVRTQAGDAYE--FPLNVTT 142
           F+ L++GTLNSL D+++VEL+QFH+IP+++S SNFQT+SNP+RTQAGD+ +  FPLNVTT
Sbjct: 87  FTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSNFQTISNPLRTQAGDSADGHFPLNVTT 146

Query: 143 SGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGVFQPRPPPPAPAPEKSKKKAK 202
           SGN+VN++SG+TNT++SG VYSD QLAVYQ+D VL P  VF PRPP PAPAP  SK K K
Sbjct: 147 SGNTVNITSGVTNTTVSGNVYSDGQLAVYQVDKVLLPQQVFDPRPPAPAPAPSVSKSKKK 206

Query: 203 AISEDPKDSTDDNSSA 217
              +D  DS+ D+S A
Sbjct: 207 ---KDDSDSSSDDSPA 219

[Close]
BLAST of CmaCh13G001840 vs. Swiss-Prot
Match: FLA11_ARATH (Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana GN=FLA11 PE=2 SV=2)

HSP 1 Score: 221.9 bits (564), Expect = 7.8e-57
Identity = 123/238 (51.68%), Postives = 172/238 (72.27%), Query Frame = 1 

Query: 9   IFFLYLFVGGSFGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQINTQLND 68
           +F  +L +  ++GQ+PA  PGP  P NI+ ILEK GQF++ IRLLKSTQ ++QINTQLN 
Sbjct: 12  LFIFFLVIATTYGQAPA--PGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNS 71

Query: 69  SNSE-LTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNPVRTQ 128
           S+S  LT+FAPTDNAF++L+SGTLNSL+DQ+KV+L+QFH++PT +++  FQTVSNP+RTQ
Sbjct: 72  SSSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRTQ 131

Query: 129 AGDAY--EFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGVFQPRP 188
           AGD    +FPLN+T+SGN VN+++G+ + +++ +VYSD QLAVYQ+D VL P+ +F    
Sbjct: 132 AGDGQNGKFPLNITSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMF-GSS 191

Query: 189 PPPAPAPEKSKKKAKAIS---EDPKDSTDDNSSAVPLTGMPVFFTGAAAVAGIMLVWI 241
             PAPAPEK    +K  +   +D  DSTD + +     G  +  T  AA+A    +WI
Sbjct: 192 VAPAPAPEKGGSVSKGSASGGDDGGDSTDSSDAERTGFGFGIRITTVAAIAASSSLWI 246

[Close]
BLAST of CmaCh13G001840 vs. Swiss-Prot
Match: FLA13_ARATH (Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana GN=FLA13 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.8e-38
Identity = 96/212 (45.28%), Postives = 133/212 (62.74%), Query Frame = 1 

Query: 22  QSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQINTQLNDSNSELTIFAPTDN 81
           Q  A APGP  P+NI+ ILEKGGQF  LIRLL +TQ+ NQIN Q+N S+  +T+ APTDN
Sbjct: 23  QRAAPAPGPAGPINITAILEKGGQFVTLIRLLNTTQIGNQINIQINSSSEGMTVLAPTDN 82

Query: 82  AFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNPVRTQAGD---AYEFPLNV 141
           AF NL+ GTLN L+  ++V+L+ +H+ P F +L +  +VSNPVRTQA        + LN 
Sbjct: 83  AFQNLKPGTLNKLSPDDQVKLILYHVSPKFYTLEDLLSVSNPVRTQASGRDVGGVYGLNF 142

Query: 142 TTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGVFQPR------PPPPAPAP 201
           T  GN VNVS+G+  T +S ++  +  LAVY +D VL P  +F  R      PPP + +P
Sbjct: 143 TGQGNQVNVSTGVVETRLSTSLRQERPLAVYVVDMVLLPEEMFGERKISPMAPPPKSKSP 202

Query: 202 E-----KSKKKAKAISEDPKDSTDDNSSAVPL 220
           +     +S KKA A SE  K  + + ++ + L
Sbjct: 203 DVSDDSESSKKAAAPSESEKSGSGEMNTGLGL 234

[Close]
BLAST of CmaCh13G001840 vs. Swiss-Prot
Match: FLA9_ARATH (Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana GN=FLA9 PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.1e-34
Identity = 89/206 (43.20%), Postives = 127/206 (61.65%), Query Frame = 1 

Query: 3   TLFSLIIFFLYLFVGGSFGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQI 62
           TL  L++    L    +  Q  A AP P  P+N++ ILEKGGQF+  I LL  TQV +Q+
Sbjct: 7   TLAPLLLIAAVLLATKATAQPAAPAPEPAGPINLTAILEKGGQFTTFIHLLNITQVGSQV 66

Query: 63  NTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSN 122
           N Q+N S+  +T+FAPTDNAF NL+ GTLN L+  ++V+L+ +H+ P + S+ +  +VSN
Sbjct: 67  NIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQLSPDDQVKLILYHVSPKYYSMDDLLSVSN 126

Query: 123 PVRTQAG--DAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGV 182
           PVRTQA   D   + LN T   N +NVS+G   T IS ++     LAVY +D VL P  +
Sbjct: 127 PVRTQASGRDNGVYGLNFTGQTNQINVSTGYVETRISNSLRQQRPLAVYVVDMVLLPGEM 186

Query: 183 F-QPRPPPPAPAPEKSKKKAKAISED 206
           F + +  P APAP   K K+  +++D
Sbjct: 187 FGEHKLSPIAPAP---KSKSGGVTDD 209

[Close]
BLAST of CmaCh13G001840 vs. Swiss-Prot
Match: FLA6_ARATH (Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana GN=FLA6 PE=2 SV=2)

HSP 1 Score: 146.4 bits (368), Expect = 4.2e-34
Identity = 99/245 (40.41%), Postives = 143/245 (58.37%), Query Frame = 1 

Query: 2   NTLFSLIIFFLYLFVGGSFGQSPAEAPGPPP---PMNISRILEKGGQFSILIRLLKSTQV 61
           ++LFS ++  ++LF    + QS   AP P     P+N++ ILE G QF+ LI+LL +TQV
Sbjct: 3   SSLFSYVVLLIFLFTI-PYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQV 62

Query: 62  ANQINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQ 121
             Q++ QLN S+  +TIFAPTDNAF+ L+ GTLNSL  Q++++L+ +H+IP + SLS+  
Sbjct: 63  GFQVSVQLNSSDQGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSDLL 122

Query: 122 TVSNPVRTQA--GDAYEFPLNVT--TSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSV 181
             SNPVRTQA   D   F LN T     N VNVS+G+  T I+  +     LAVY +DSV
Sbjct: 123 LASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVDSV 182

Query: 182 LKPIGVFQPRPPPP-APAPEKSKKKAKAISEDPKDSTDDNSSAVPLTGMPVFFTGAAAVA 239
           L P  +F  +  P  APAP+ S   + A S    D      S+V  T + +  + A    
Sbjct: 183 LLPEELFGTKTTPTGAPAPKSSTSSSDADSPAADDEHKSAGSSVKRTSLGIVVSFALFCC 242

[Close]
BLAST of CmaCh13G001840 vs. TrEMBL
Match: A0A0A0LVA0_CUCSA (Arabinogalactan protein 2 OS=Cucumis sativus GN=Csa_1G085380 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 1.1e-110
Identity = 208/241 (86.31%), Postives = 225/241 (93.36%), Query Frame = 1 

Query: 2   NTLFSLIIFFLYLFVGGSFGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQ 61
           N+LFSL+I  ++ F+  S+GQSPAEAPGPPPPMNI++ILEKGGQF++LIRLLK+TQVANQ
Sbjct: 3   NSLFSLVILLIFFFLDCSYGQSPAEAPGPPPPMNITKILEKGGQFNVLIRLLKNTQVANQ 62

Query: 62  INTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVS 121
           INTQLNDSNSELT+FAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT+S
Sbjct: 63  INTQLNDSNSELTLFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTIS 122

Query: 122 NPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGVF 181
           NPVRTQAGDAYEFPLNVTTSGNSVNVSSGL NTSISGTVY+DNQLA+YQIDSVLKPIGVF
Sbjct: 123 NPVRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYTDNQLAIYQIDSVLKPIGVF 182

Query: 182 QPRPPPPAPAPEKSKKKAKAISEDPKDSTDDNSSAVPLTGMPVFFTGAAAVAGIMLVWIN 241
           QPRPPPPAPAPEKSKKKAK  SE PKDS DDNSSAVPL G+ V  TGAA V GIMLVWIN
Sbjct: 183 QPRPPPPAPAPEKSKKKAKGNSESPKDSDDDNSSAVPLAGVSVISTGAAVVVGIMLVWIN 242

Query: 242 T 243
           +
Sbjct: 243 S 243

[Close]
BLAST of CmaCh13G001840 vs. TrEMBL
Match: A9PAK7_POPTR (Fasciclin-like AGP 15 family protein OS=Populus trichocarpa GN=POPTR_0012s14510g PE=2 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 3.1e-68
Identity = 146/232 (62.93%), Postives = 182/232 (78.45%), Query Frame = 1 

Query: 5   FSLIIFFLYLFVGGSFGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQINT 64
           FSLI+ FL L    +  QSPA APGPP P N+++ILEKGGQFS+ IRLLK+TQ    +N 
Sbjct: 9   FSLILSFL-LHCPPTLAQSPAAAPGPPGPTNVTKILEKGGQFSVFIRLLKATQEDVTLNG 68

Query: 65  QLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNPV 124
           QLN++N+ +TIFAP+DNAFS+L+SGTLNSLNDQEK EL+QFH+IP +LS S FQTVSNP+
Sbjct: 69  QLNNTNNAITIFAPSDNAFSSLKSGTLNSLNDQEKAELVQFHIIPQYLSSSQFQTVSNPL 128

Query: 125 RTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGVFQPR 184
            TQAG      LNVTT+GNSVN+++GLTNTS+SGT+Y+DNQLAVYQ+D VL P+ +F P+
Sbjct: 129 TTQAGSGGRLELNVTTTGNSVNITTGLTNTSVSGTIYTDNQLAVYQVDKVLLPVDIFTPK 188

Query: 185 PPPPAPAPEKSKKKAKAISEDPKDSTDDNSSAVPLTGM-PVFFTGAAAVAGI 236
           PP PAPAPEK KK++KA +E P D+ +DNS AV LT +  V F G   VA I
Sbjct: 189 PPTPAPAPEKPKKRSKA-AESP-DAPEDNSGAVSLTVLNDVVFFGVGIVAAI 237

[Close]
BLAST of CmaCh13G001840 vs. TrEMBL
Match: A0A061GV39_THECC (FASCICLIN-like arabinogalactan-protein 11 OS=Theobroma cacao GN=TCM_041052 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.2e-67
Identity = 137/213 (64.32%), Postives = 178/213 (83.57%), Query Frame = 1 

Query: 23  SPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQINTQLNDSNSELTIFAPTDNA 82
           +PA AP PP P N+++ILEK GQF++ IRLLK+T VANQ+  QLN++N+ +TIFAPTDNA
Sbjct: 32  APALAPAPPGPTNVTKILEKAGQFTLFIRLLKATAVANQLLGQLNNTNNGMTIFAPTDNA 91

Query: 83  FSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNPVRTQAGDAYE--FPLNVTT 142
           FS+L+SGTLNSL+D++KVEL+QFH+IPT+LS + FQT+SNP+RTQAGD+ +  FPLNVTT
Sbjct: 92  FSSLKSGTLNSLSDEQKVELVQFHIIPTYLSSTQFQTISNPLRTQAGDSADGKFPLNVTT 151

Query: 143 SGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGVFQPRPPPPAPAPEKSKKKAK 202
           SGNSVN+++GLTNTS+SGT+Y+D QLAVYQ+D VL+P+ +F PRPP PAPAP KSKKKA 
Sbjct: 152 SGNSVNITTGLTNTSVSGTIYTDGQLAVYQVDKVLQPLQIFDPRPPAPAPAPAKSKKKA- 211

Query: 203 AISEDPKDSTDDNSSAV-PLTGMPVFFTGAAAV 233
           A+++ P D+  DNS AV  LT   V F G +A+
Sbjct: 212 AVADSPDDTPADNSKAVSTLTMQNVVFWGVSAI 243

[Close]
BLAST of CmaCh13G001840 vs. TrEMBL
Match: A9XTK6_GOSHI (Arabinogalactan protein 2 OS=Gossypium hirsutum GN=FLA1 PE=2 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 9.9e-67
Identity = 139/234 (59.40%), Postives = 182/234 (77.78%), Query Frame = 1 

Query: 3   TLFSLIIFFLYLFVGGSFGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQI 62
           T  +L+I F  L    +  QSPA AP P  P N+++ILEK GQF++ IRLLKSTQVANQ+
Sbjct: 8   TTLTLLILFS-LSCSTTLAQSPALAPAPSGPTNVTKILEKAGQFTLFIRLLKSTQVANQL 67

Query: 63  NTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSN 122
             QLN+SN+ +T+FAPTDNAFS+L+SGTLNSL D++KV+L+QFH++PT+L+ S FQT+SN
Sbjct: 68  LGQLNNSNNGMTVFAPTDNAFSSLKSGTLNSLTDEQKVQLVQFHIVPTYLTSSQFQTISN 127

Query: 123 PVRTQAGDAYE--FPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGV 182
           P+RTQAGD+ +  FPLNVTTSGNSVN+++GLTNTS+SGT+Y+D QLAVYQID VL+P+ +
Sbjct: 128 PLRTQAGDSGDGKFPLNVTTSGNSVNITTGLTNTSVSGTIYTDGQLAVYQIDQVLQPLQI 187

Query: 183 FQPRPPPPAPAPEKSK-KKAKAISEDPKDSTDDNSSAVPLTGMPVFFTGAAAVA 234
           F PRPP PAPAP KSK KKA  +++ P  +  DNS A  L  + +F   A  +A
Sbjct: 188 FAPRPPAPAPAPAKSKNKKATTVADSPDVTPADNSKAATLQNVGLFGVAALVIA 240

[Close]
BLAST of CmaCh13G001840 vs. TrEMBL
Match: Q7Y250_GOSHI (Arabinogalactan protein OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.3e-66
Identity = 138/234 (58.97%), Postives = 182/234 (77.78%), Query Frame = 1 

Query: 3   TLFSLIIFFLYLFVGGSFGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQI 62
           T  +L+I F  L    +  Q+PA AP P  P N+++ILEK GQF++ IRLLKSTQVANQ+
Sbjct: 8   TTLTLLILFS-LSCSTTLAQAPALAPAPSGPTNVTKILEKAGQFTLFIRLLKSTQVANQL 67

Query: 63  NTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSN 122
             QLN+SN+ +T+FAPTDNAFS+L+SGTLNSL D++KVEL+QFH++PT+L+ S FQT+SN
Sbjct: 68  LGQLNNSNNGMTVFAPTDNAFSSLKSGTLNSLTDEQKVELVQFHIVPTYLTSSQFQTISN 127

Query: 123 PVRTQAGDAYE--FPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGV 182
           P+RTQAGD+ +  FPLN+TTSGNSVN+++GLTNTS+SGT+Y+D QLAVYQID VL+P+ +
Sbjct: 128 PLRTQAGDSGDGKFPLNITTSGNSVNITTGLTNTSVSGTIYTDGQLAVYQIDQVLQPLQI 187

Query: 183 FQPRPPPPAPAPEKSK-KKAKAISEDPKDSTDDNSSAVPLTGMPVFFTGAAAVA 234
           F PRPP PAPAP KSK KKA  +++ P  +  DNS A  L  + +F   A  +A
Sbjct: 188 FAPRPPAPAPAPAKSKNKKATTVADSPDVTPADNSKAATLQNVGLFGVAALVIA 240

[Close]
BLAST of CmaCh13G001840 vs. TAIR10
Match: AT5G60490.1 (AT5G60490.1 FASCICLIN-like arabinogalactan-protein 12)

HSP 1 Score: 239.2 bits (609), Expect = 2.7e-63
Identity = 123/196 (62.76%), Postives = 161/196 (82.14%), Query Frame = 1 

Query: 23  SPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQINTQLNDSNSELTIFAPTDNA 82
           SPA AP PP P N+++ILEK GQF++ IRLLKST VANQ+  QLN+S++ +TIFAP+D++
Sbjct: 27  SPAVAPAPPGPTNVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNSDNGITIFAPSDSS 86

Query: 83  FSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNPVRTQAGDAYE--FPLNVTT 142
           F+ L++GTLNSL D+++VEL+QFH+IP+++S SNFQT+SNP+RTQAGD+ +  FPLNVTT
Sbjct: 87  FTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSNFQTISNPLRTQAGDSADGHFPLNVTT 146

Query: 143 SGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGVFQPRPPPPAPAPEKSKKKAK 202
           SGN+VN++SG+TNT++SG VYSD QLAVYQ+D VL P  VF PRPP PAPAP  SK K K
Sbjct: 147 SGNTVNITSGVTNTTVSGNVYSDGQLAVYQVDKVLLPQQVFDPRPPAPAPAPSVSKSKKK 206

Query: 203 AISEDPKDSTDDNSSA 217
              +D  DS+ D+S A
Sbjct: 207 ---KDDSDSSSDDSPA 219

[Close]
BLAST of CmaCh13G001840 vs. TAIR10
Match: AT5G03170.1 (AT5G03170.1 FASCICLIN-like arabinogalactan-protein 11)

HSP 1 Score: 221.9 bits (564), Expect = 4.4e-58
Identity = 123/238 (51.68%), Postives = 172/238 (72.27%), Query Frame = 1 

Query: 9   IFFLYLFVGGSFGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQINTQLND 68
           +F  +L +  ++GQ+PA  PGP  P NI+ ILEK GQF++ IRLLKSTQ ++QINTQLN 
Sbjct: 12  LFIFFLVIATTYGQAPA--PGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNS 71

Query: 69  SNSE-LTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNPVRTQ 128
           S+S  LT+FAPTDNAF++L+SGTLNSL+DQ+KV+L+QFH++PT +++  FQTVSNP+RTQ
Sbjct: 72  SSSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRTQ 131

Query: 129 AGDAY--EFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGVFQPRP 188
           AGD    +FPLN+T+SGN VN+++G+ + +++ +VYSD QLAVYQ+D VL P+ +F    
Sbjct: 132 AGDGQNGKFPLNITSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMF-GSS 191

Query: 189 PPPAPAPEKSKKKAKAIS---EDPKDSTDDNSSAVPLTGMPVFFTGAAAVAGIMLVWI 241
             PAPAPEK    +K  +   +D  DSTD + +     G  +  T  AA+A    +WI
Sbjct: 192 VAPAPAPEKGGSVSKGSASGGDDGGDSTDSSDAERTGFGFGIRITTVAAIAASSSLWI 246

[Close]
BLAST of CmaCh13G001840 vs. TAIR10
Match: AT5G44130.1 (AT5G44130.1 FASCICLIN-like arabinogalactan protein 13 precursor)

HSP 1 Score: 160.2 bits (404), Expect = 1.6e-39
Identity = 96/212 (45.28%), Postives = 133/212 (62.74%), Query Frame = 1 

Query: 22  QSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQINTQLNDSNSELTIFAPTDN 81
           Q  A APGP  P+NI+ ILEKGGQF  LIRLL +TQ+ NQIN Q+N S+  +T+ APTDN
Sbjct: 23  QRAAPAPGPAGPINITAILEKGGQFVTLIRLLNTTQIGNQINIQINSSSEGMTVLAPTDN 82

Query: 82  AFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNPVRTQAGD---AYEFPLNV 141
           AF NL+ GTLN L+  ++V+L+ +H+ P F +L +  +VSNPVRTQA        + LN 
Sbjct: 83  AFQNLKPGTLNKLSPDDQVKLILYHVSPKFYTLEDLLSVSNPVRTQASGRDVGGVYGLNF 142

Query: 142 TTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGVFQPR------PPPPAPAP 201
           T  GN VNVS+G+  T +S ++  +  LAVY +D VL P  +F  R      PPP + +P
Sbjct: 143 TGQGNQVNVSTGVVETRLSTSLRQERPLAVYVVDMVLLPEEMFGERKISPMAPPPKSKSP 202

Query: 202 E-----KSKKKAKAISEDPKDSTDDNSSAVPL 220
           +     +S KKA A SE  K  + + ++ + L
Sbjct: 203 DVSDDSESSKKAAAPSESEKSGSGEMNTGLGL 234

[Close]
BLAST of CmaCh13G001840 vs. TAIR10
Match: AT1G03870.1 (AT1G03870.1 FASCICLIN-like arabinoogalactan 9)

HSP 1 Score: 148.3 bits (373), Expect = 6.2e-36
Identity = 89/206 (43.20%), Postives = 127/206 (61.65%), Query Frame = 1 

Query: 3   TLFSLIIFFLYLFVGGSFGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQI 62
           TL  L++    L    +  Q  A AP P  P+N++ ILEKGGQF+  I LL  TQV +Q+
Sbjct: 7   TLAPLLLIAAVLLATKATAQPAAPAPEPAGPINLTAILEKGGQFTTFIHLLNITQVGSQV 66

Query: 63  NTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSN 122
           N Q+N S+  +T+FAPTDNAF NL+ GTLN L+  ++V+L+ +H+ P + S+ +  +VSN
Sbjct: 67  NIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQLSPDDQVKLILYHVSPKYYSMDDLLSVSN 126

Query: 123 PVRTQAG--DAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGV 182
           PVRTQA   D   + LN T   N +NVS+G   T IS ++     LAVY +D VL P  +
Sbjct: 127 PVRTQASGRDNGVYGLNFTGQTNQINVSTGYVETRISNSLRQQRPLAVYVVDMVLLPGEM 186

Query: 183 F-QPRPPPPAPAPEKSKKKAKAISED 206
           F + +  P APAP   K K+  +++D
Sbjct: 187 FGEHKLSPIAPAP---KSKSGGVTDD 209

[Close]
BLAST of CmaCh13G001840 vs. TAIR10
Match: AT2G20520.1 (AT2G20520.1 FASCICLIN-like arabinogalactan 6)

HSP 1 Score: 146.4 bits (368), Expect = 2.3e-35
Identity = 99/245 (40.41%), Postives = 143/245 (58.37%), Query Frame = 1 

Query: 2   NTLFSLIIFFLYLFVGGSFGQSPAEAPGPPP---PMNISRILEKGGQFSILIRLLKSTQV 61
           ++LFS ++  ++LF    + QS   AP P     P+N++ ILE G QF+ LI+LL +TQV
Sbjct: 3   SSLFSYVVLLIFLFTI-PYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQV 62

Query: 62  ANQINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQ 121
             Q++ QLN S+  +TIFAPTDNAF+ L+ GTLNSL  Q++++L+ +H+IP + SLS+  
Sbjct: 63  GFQVSVQLNSSDQGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSDLL 122

Query: 122 TVSNPVRTQA--GDAYEFPLNVT--TSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSV 181
             SNPVRTQA   D   F LN T     N VNVS+G+  T I+  +     LAVY +DSV
Sbjct: 123 LASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVDSV 182

Query: 182 LKPIGVFQPRPPPP-APAPEKSKKKAKAISEDPKDSTDDNSSAVPLTGMPVFFTGAAAVA 239
           L P  +F  +  P  APAP+ S   + A S    D      S+V  T + +  + A    
Sbjct: 183 LLPEELFGTKTTPTGAPAPKSSTSSSDADSPAADDEHKSAGSSVKRTSLGIVVSFALFCC 242

[Close]
BLAST of CmaCh13G001840 vs. NCBI nr
Match: gi|659072184|ref|XP_008463798.1| (PREDICTED: fasciclin-like arabinogalactan protein 12 [Cucumis melo])

HSP 1 Score: 410.6 bits (1054), Expect = 1.9e-111
Identity = 210/241 (87.14%), Postives = 225/241 (93.36%), Query Frame = 1 

Query: 2   NTLFSLIIFFLYLFVGGSFGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQ 61
           N+LFSL+I  ++ F+  S+GQSPAEAPGPPPPMNIS+ILEKGGQF++LIRLLKSTQVANQ
Sbjct: 3   NSLFSLVILLIFFFIDCSYGQSPAEAPGPPPPMNISKILEKGGQFNVLIRLLKSTQVANQ 62

Query: 62  INTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVS 121
           INTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT+S
Sbjct: 63  INTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTIS 122

Query: 122 NPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGVF 181
           NPVRTQAGDAYEFPLNVTTSGNSVN+SSGL NTSISGTVY+DNQLA+YQIDSVLKPIGVF
Sbjct: 123 NPVRTQAGDAYEFPLNVTTSGNSVNISSGLVNTSISGTVYTDNQLAIYQIDSVLKPIGVF 182

Query: 182 QPRPPPPAPAPEKSKKKAKAISEDPKDSTDDNSSAVPLTGMPVFFTGAAAVAGIMLVWIN 241
           QPRPPPPAPAPEKSKKKAK ISE PKDS DDNSSAVPL G+  F T AA V GIMLVWIN
Sbjct: 183 QPRPPPPAPAPEKSKKKAKGISESPKDSDDDNSSAVPLAGISSFSTEAAVVVGIMLVWIN 242

Query: 242 T 243
           +
Sbjct: 243 S 243

[Close]
BLAST of CmaCh13G001840 vs. NCBI nr
Match: gi|449462077|ref|XP_004148768.1| (PREDICTED: fasciclin-like arabinogalactan protein 12 [Cucumis sativus])

HSP 1 Score: 407.5 bits (1046), Expect = 1.6e-110
Identity = 208/241 (86.31%), Postives = 225/241 (93.36%), Query Frame = 1 

Query: 2   NTLFSLIIFFLYLFVGGSFGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQ 61
           N+LFSL+I  ++ F+  S+GQSPAEAPGPPPPMNI++ILEKGGQF++LIRLLK+TQVANQ
Sbjct: 3   NSLFSLVILLIFFFLDCSYGQSPAEAPGPPPPMNITKILEKGGQFNVLIRLLKNTQVANQ 62

Query: 62  INTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVS 121
           INTQLNDSNSELT+FAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT+S
Sbjct: 63  INTQLNDSNSELTLFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTIS 122

Query: 122 NPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGVF 181
           NPVRTQAGDAYEFPLNVTTSGNSVNVSSGL NTSISGTVY+DNQLA+YQIDSVLKPIGVF
Sbjct: 123 NPVRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYTDNQLAIYQIDSVLKPIGVF 182

Query: 182 QPRPPPPAPAPEKSKKKAKAISEDPKDSTDDNSSAVPLTGMPVFFTGAAAVAGIMLVWIN 241
           QPRPPPPAPAPEKSKKKAK  SE PKDS DDNSSAVPL G+ V  TGAA V GIMLVWIN
Sbjct: 183 QPRPPPPAPAPEKSKKKAKGNSESPKDSDDDNSSAVPLAGVSVISTGAAVVVGIMLVWIN 242

Query: 242 T 243
           +
Sbjct: 243 S 243

[Close]
BLAST of CmaCh13G001840 vs. NCBI nr
Match: gi|1009115649|ref|XP_015874343.1| (PREDICTED: fasciclin-like arabinogalactan protein 12 [Ziziphus jujuba])

HSP 1 Score: 269.2 bits (687), Expect = 6.8e-69
Identity = 144/235 (61.28%), Postives = 186/235 (79.15%), Query Frame = 1 

Query: 5   FSLIIFFLYLFVGGSF-GQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQIN 64
           F+L +  L+LF   +  GQ+PA +PGP  P++I +IL K GQF+ILIRLL+STQV NQIN
Sbjct: 6   FTLSLLLLFLFHCTTISGQAPAASPGPAAPLDIYKILTKAGQFTILIRLLRSTQVGNQIN 65

Query: 65  TQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNP 124
           +QL DSNSELT FAPTDNAFS+L++GTLNSL+DQ+KV L+QFH+IP+F+S+SNFQT+SNP
Sbjct: 66  SQLGDSNSELTFFAPTDNAFSSLKTGTLNSLSDQQKVMLVQFHLIPSFISISNFQTMSNP 125

Query: 125 VRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGVFQP 184
           V+TQA + YEFPLN+TTSG+ VN+++GL NTSISGTVYSDNQLAVYQ++ VL+P+G+F P
Sbjct: 126 VQTQASNTYEFPLNITTSGSQVNITTGLVNTSISGTVYSDNQLAVYQVEKVLQPLGIFAP 185

Query: 185 R--PPPPAPAPEKSKKKAKAISEDPKDSTDDNSSAVPLTGMPVFFTGAAAVAGIM 237
           R  PP PAPAP KSKKK+   S+ P  S  D S AV +T   +   G + V  ++
Sbjct: 186 RSLPPAPAPAPPKSKKKSATSSDSPVASV-DASGAVGVTRNVLVSVGVSIVVSVL 239

[Close]
BLAST of CmaCh13G001840 vs. NCBI nr
Match: gi|743856642|ref|XP_011029966.1| (PREDICTED: fasciclin-like arabinogalactan protein 12 [Populus euphratica])

HSP 1 Score: 266.5 bits (680), Expect = 4.4e-68
Identity = 146/232 (62.93%), Postives = 182/232 (78.45%), Query Frame = 1 

Query: 5   FSLIIFFLYLFVGGSFGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQINT 64
           FSLI+ FL L    +  QSPA APGPP P N+++ILEKGGQFS+ IRLLK+TQ    +N 
Sbjct: 9   FSLILSFL-LHCPPTLAQSPAAAPGPPGPANVTKILEKGGQFSVFIRLLKATQEDVTLNG 68

Query: 65  QLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNPV 124
           QLN++N+ +TIFAP+DNAFS+L+SGTLNSLNDQEK EL+QFH+IP +LS S FQTVSNP+
Sbjct: 69  QLNNTNNAITIFAPSDNAFSSLKSGTLNSLNDQEKAELVQFHIIPQYLSSSQFQTVSNPL 128

Query: 125 RTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGVFQPR 184
            TQAG      LNVTT+GNSVN+++GLTNTS+SGT+Y+DNQLAVYQ+D VL P+ +F P+
Sbjct: 129 TTQAGSGGRLELNVTTTGNSVNITTGLTNTSVSGTIYTDNQLAVYQVDKVLLPVDIFTPK 188

Query: 185 PPPPAPAPEKSKKKAKAISEDPKDSTDDNSSAVPLTGM-PVFFTGAAAVAGI 236
           PP PAPAPEK KK++KA +E P D+ +DNS AV LT +  V F G   VA I
Sbjct: 189 PPTPAPAPEKPKKRSKA-AESP-DAPEDNSGAVSLTVLNDVVFFGVGIVAAI 237

[Close]
BLAST of CmaCh13G001840 vs. NCBI nr
Match: gi|224122602|ref|XP_002318877.1| (fasciclin-like AGP 15 family protein [Populus trichocarpa])

HSP 1 Score: 266.5 bits (680), Expect = 4.4e-68
Identity = 146/232 (62.93%), Postives = 182/232 (78.45%), Query Frame = 1 

Query: 5   FSLIIFFLYLFVGGSFGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQINT 64
           FSLI+ FL L    +  QSPA APGPP P N+++ILEKGGQFS+ IRLLK+TQ    +N 
Sbjct: 9   FSLILSFL-LHCPPTLAQSPAAAPGPPGPTNVTKILEKGGQFSVFIRLLKATQEDVTLNG 68

Query: 65  QLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNPV 124
           QLN++N+ +TIFAP+DNAFS+L+SGTLNSLNDQEK EL+QFH+IP +LS S FQTVSNP+
Sbjct: 69  QLNNTNNAITIFAPSDNAFSSLKSGTLNSLNDQEKAELVQFHIIPQYLSSSQFQTVSNPL 128

Query: 125 RTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGVFQPR 184
            TQAG      LNVTT+GNSVN+++GLTNTS+SGT+Y+DNQLAVYQ+D VL P+ +F P+
Sbjct: 129 TTQAGSGGRLELNVTTTGNSVNITTGLTNTSVSGTIYTDNQLAVYQVDKVLLPVDIFTPK 188

Query: 185 PPPPAPAPEKSKKKAKAISEDPKDSTDDNSSAVPLTGM-PVFFTGAAAVAGI 236
           PP PAPAPEK KK++KA +E P D+ +DNS AV LT +  V F G   VA I
Sbjct: 189 PPTPAPAPEKPKKRSKA-AESP-DAPEDNSGAVSLTVLNDVVFFGVGIVAAI 237

The following BLAST results are available for this feature:
BLAST of CmaCh13G001840 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FLA12_ARATH4.7e-6262.76Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana GN=FLA12 PE=2 ... [more]
FLA11_ARATH7.8e-5751.68Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana GN=FLA11 PE=2 ... [more]
FLA13_ARATH2.8e-3845.28Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana GN=FLA13 PE=1 ... [more]
FLA9_ARATH1.1e-3443.20Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana GN=FLA9 PE=1 SV... [more]
FLA6_ARATH4.2e-3440.41Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana GN=FLA6 PE=2 SV... [more]
BLAST of CmaCh13G001840 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVA0_CUCSA1.1e-11086.31Arabinogalactan protein 2 OS=Cucumis sativus GN=Csa_1G085380 PE=4 SV=1[more]
A9PAK7_POPTR3.1e-6862.93Fasciclin-like AGP 15 family protein OS=Populus trichocarpa GN=POPTR_0012s14510g... [more]
A0A061GV39_THECC1.2e-6764.32FASCICLIN-like arabinogalactan-protein 11 OS=Theobroma cacao GN=TCM_041052 PE=4 ... [more]
A9XTK6_GOSHI9.9e-6759.40Arabinogalactan protein 2 OS=Gossypium hirsutum GN=FLA1 PE=2 SV=1[more]
Q7Y250_GOSHI1.3e-6658.97Arabinogalactan protein OS=Gossypium hirsutum PE=2 SV=1[more]
BLAST of CmaCh13G001840 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G60490.12.7e-6362.76 FASCICLIN-like arabinogalactan-protein 12[more]
AT5G03170.14.4e-5851.68 FASCICLIN-like arabinogalactan-protein 11[more]
AT5G44130.11.6e-3945.28 FASCICLIN-like arabinogalactan protein 13 precursor[more]
AT1G03870.16.2e-3643.20 FASCICLIN-like arabinoogalactan 9[more]
AT2G20520.12.3e-3540.41 FASCICLIN-like arabinogalactan 6[more]
BLAST of CmaCh13G001840 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659072184|ref|XP_008463798.1|1.9e-11187.14PREDICTED: fasciclin-like arabinogalactan protein 12 [Cucumis melo][more]
gi|449462077|ref|XP_004148768.1|1.6e-11086.31PREDICTED: fasciclin-like arabinogalactan protein 12 [Cucumis sativus][more]
gi|1009115649|ref|XP_015874343.1|6.8e-6961.28PREDICTED: fasciclin-like arabinogalactan protein 12 [Ziziphus jujuba][more]
gi|743856642|ref|XP_011029966.1|4.4e-6862.93PREDICTED: fasciclin-like arabinogalactan protein 12 [Populus euphratica][more]
gi|224122602|ref|XP_002318877.1|4.4e-6862.93fasciclin-like AGP 15 family protein [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000782FAS1_domain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009834 plant-type secondary cell wall biogenesis
biological_process GO:0008150 biological_process
biological_process GO:0009737 response to abscisic acid
biological_process GO:0009733 response to auxin
biological_process GO:0009735 response to cytokinin
biological_process GO:0009739 response to gibberellin
biological_process GO:0009651 response to salt stress
biological_process GO:0090376 seed trichome differentiation
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh13G001840.1CmaCh13G001840.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000782FAS1 domainGENE3DG3DSA:2.30.180.10coord: 34..177
score: 4.0
IPR000782FAS1 domainPFAMPF02469Fasciclincoord: 45..177
score: 2.3
IPR000782FAS1 domainSMARTSM00554fasc_3coord: 74..178
score: 6.8
IPR000782FAS1 domainPROFILEPS50213FAS1coord: 33..175
score: 21
IPR000782FAS1 domainunknownSSF82153FAS1 domaincoord: 28..177
score: 1.44
NoneNo IPR availablePANTHERPTHR32077FAMILY NOT NAMEDcoord: 1..218
score: 2.1E
NoneNo IPR availablePANTHERPTHR32077:SF10FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 12coord: 1..218
score: 2.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh13G001840Cucsa.207270Cucumber (Gy14) v1cgycmaB0610
CmaCh13G001840Cla005042Watermelon (97103) v1cmawmB185
CmaCh13G001840Csa1G085380Cucumber (Chinese Long) v2cmacuB203
CmaCh13G001840MELO3C005051Melon (DHL92) v3.5.1cmameB194
CmaCh13G001840ClCG03G002250Watermelon (Charleston Gray)cmawcgB194
CmaCh13G001840CSPI01G12740Wild cucumber (PI 183967)cmacpiB205
CmaCh13G001840CmoCh01G005690Cucurbita moschata (Rifu)cmacmoB226
CmaCh13G001840CmoCh13G001870Cucurbita moschata (Rifu)cmacmoB218
CmaCh13G001840Cp4.1LG02g12840Cucurbita pepo (Zucchini)cmacpeB237
CmaCh13G001840Cp4.1LG20g08990Cucurbita pepo (Zucchini)cmacpeB235
CmaCh13G001840MELO3C005051.2Melon (DHL92) v3.6.1cmamedB215
CmaCh13G001840CsaV3_1G012930Cucumber (Chinese Long) v3cmacucB0234
CmaCh13G001840Cla97C03G053260Watermelon (97103) v2cmawmbB225
CmaCh13G001840Bhi08G000270Wax gourdcmawgoB0259
CmaCh13G001840CsGy1G012780Cucumber (Gy14) v2cgybcmaB061
CmaCh13G001840Carg21061Silver-seed gourdcarcmaB1017
CmaCh13G001840Carg12314Silver-seed gourdcarcmaB0610
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh13G001840CmaCh01G005390Cucurbita maxima (Rimu)cmacmaB220
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh13G001840Cucurbita maxima (Rimu)cmacmaB208
CmaCh13G001840Cucurbita maxima (Rimu)cmacmaB226
CmaCh13G001840Cucurbita maxima (Rimu)cmacmaB229
CmaCh13G001840Cucurbita maxima (Rimu)cmacmaB234
CmaCh13G001840Cucurbita moschata (Rifu)cmacmoB231
CmaCh13G001840Cucurbita moschata (Rifu)cmacmoB233
CmaCh13G001840Wild cucumber (PI 183967)cmacpiB232
CmaCh13G001840Cucumber (Chinese Long) v2cmacuB230
CmaCh13G001840Melon (DHL92) v3.5.1cmameB190
CmaCh13G001840Watermelon (Charleston Gray)cmawcgB189
CmaCh13G001840Watermelon (Charleston Gray)cmawcgB193
CmaCh13G001840Watermelon (97103) v1cmawmB209
CmaCh13G001840Watermelon (97103) v1cmawmB211
CmaCh13G001840Cucurbita pepo (Zucchini)cmacpeB225
CmaCh13G001840Cucurbita pepo (Zucchini)cmacpeB226
CmaCh13G001840Bottle gourd (USVL1VR-Ls)cmalsiB193
CmaCh13G001840Bottle gourd (USVL1VR-Ls)cmalsiB196
CmaCh13G001840Bottle gourd (USVL1VR-Ls)cmalsiB201
CmaCh13G001840Bottle gourd (USVL1VR-Ls)cmalsiB216
CmaCh13G001840Cucumber (Gy14) v2cgybcmaB727
CmaCh13G001840Melon (DHL92) v3.6.1cmamedB212
CmaCh13G001840Silver-seed gourdcarcmaB0468
CmaCh13G001840Silver-seed gourdcarcmaB0469
CmaCh13G001840Cucumber (Chinese Long) v3cmacucB0266
CmaCh13G001840Watermelon (97103) v2cmawmbB220
CmaCh13G001840Watermelon (97103) v2cmawmbB223
CmaCh13G001840Wax gourdcmawgoB0242
CmaCh13G001840Wax gourdcmawgoB0244