Cp4.1LG18g02450 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG18g02450
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionVacuolar protein sorting-associated protein, putative
LocationCp4.1LG18 : 4118270 .. 4136039 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTACAAAACTCACCGGAGAAACTTTCAGGAGGAAGTAGCGGCAAAATTGCAGAGAGAGAGAGGGAGCCGGCGAGATTGAGACGAAGGTTGAGAGAGATTTCCAGGACGGAGAGTGATTGAATGAATCGGCGAGAGCGTGATTTTCCGAGGGAGATAGAGACTAAGTGTAATTGACGGTGAGATTCAGGGAGAGAATCAGAGAGAGCAAATATCAGATGAACTTAGGCGGGTTTACTTGTTGGCGGCAGCGTTTTTAGGGTGGAAAGTGTGAGAATGTTTGAAAGACTTGTTGGACAGTTACTTGTGGGTTATTTGGGCAGATATGTCAAGGATATTCAGAAGGAGAAGCTGAAGATTACGTTTTGGAACGGTTCGTTCTTCTTATTTTACTGTATGAACAATTTTAGCTTTTGGTTGTCTTAATCTTAGTTAAGTAGCTTCGGCGGAGGAGTTGCCATCGTCTCGAATTGATGCTAATACTTCCTTATGCTCTTATAAAATGATTCTCGGAATGTATGATCCATGGCTATCTGGAATGCGCTCCTTGGACAAATGGGTCGCTGCTTTTCTATTATATTGAACTAATCCAAAGTATAACCCGCCATGCGGAAGCCACCATCTTCCTTATCTTCGTTTCACTTATCTTTTTGATTGGAAAATGGAGTTCTGTCTGAAATATTTTTCATCAGGGTTGATCCTAAATAATATCAAACAGAGGAAATTCTACATAGGATAACCCGATTGCTTCAACTACACACTTTCTCTTTAGTAAGTGACTCCGGCATTGTCTGCTCAGAATCCCCCTGTTTCATTAGAAAGTCTGAATTGCTCTTACCCAATACTGCAGCGCTACTCTCTAGGGTTGATCTCCTTTGTGAGTTTCAATTCTACATTCTTTTTTAGATAAGAAATCGAACTTTTATCGAAAACAAAGGTGTACAAAAAAACAAGCTCCAAAAAAAGAATAGGAGTCCAACATAACTACAAAAAGGACTCAAATCCAAAAGAACAAGACCAATATCATATTTACAAAGAAGTCTAGGATCTGATGCCCAAATGAAAACATTAAACCTCACGAATCTTAGTCAAACACTCTATTGGTTGAATATTTTTTGGTATGGTACAAATAATCTATTCTTTGAAATTCTCTCAAGCCAAAGTATTTTTAGGATATGATACCACGCTAGCTTTGAAGTATCCACTTTTGTACAGGCTTTCTCACAACAAAAAAGCCACGATTAAAGAAACGTGGAATGTTGTCAACAAATTTTGGGACTTGAAACTTGGTAGGAATCTAAAGGATAATGAAGCAACGGAGTGGGCCGAATTAAGCCTTGACCTTGCCCCTGTGGTATTGTCAAACAAAGAAGACTCACTAACTTGGCTCCCTAGCGCTGACGGGGTCTTTTCTACAAAATCCTTGATGATGGACATGGGGGAAAAAGTAGAAGCAATGAATCCGACGCTAGCAAAGACAATATGGAAAGGACATCAACCTATAAAGGTGAAGTTCTTCCTTTGGGAAATAGCGCATAAAGCCATCAGCACAAGTGAAAATCTTCAAAAAAGAATGCCTTACATCACTCTCTCCAAATTGGTGTCCACTATGCAAGAAAGCAAACGAATCACAAAGTCACTTGTTTATGCAATGCACATACACTCAAAATTTCTGGACAACGATTCTTAATATATCCGGATGACATCTCACATTTCCTAGGGAGGTAAAGGATTTTTTGGATATGGCCTTAACGTACCACCCTTTCAAGACCGCAAAAGCCTTATTATGGAAAAACCTCATCATGGCCTTCTTTCGGAATCTGTGGAAAGAAAGAAATCAGAGAATATTTGTAGAAACGAACAGACCTACACAAAACTTTTCGACAATGTTGTTTACCAAGCTATATCTTGGTGTAAACAGTCTAATATTTTTACTTCCTATAGTTATACCTCCCTCATTGCAATTTGGGAAGGTCTTTTGTAAACATCATGGATTATACATCCCTCTTGTAAATTTCACTCATCAATGAAATTGTCTCTTATAAAAAAAAAAGAAATTCTCTCAAGCCAAAGTATATAGTCATTGCACATTTACTCAAAAAATGATCTCGTGCCTCTTGGAGAGTAATAGATCCATGAAACAACTGTAAAGCGGAGAGAGACAAAATGAGTAGAGAGTGAAGAAAAGGAAGGTCTCCCAACTTCTTTGATATATCCATTGTGCTATATTAATGAGATATCTTGTTGATGGCCATGTTTTTATTTTTTTATTTTTGGATAGATAGTAGAAGTTTGAGTTAAGACGGAGTTGGTAGGTGTTGTTGTACTGTTCTAATCGATTTTATGATGTTAATTATGTGGTAGGATTTTCCATTGTGACTTTTCTACTGCCAATAAGAAGTTCTTGTTTCTTTCTTCCTTCCTCTTCTTCTTTCTTTCAATTTTATTAAATGAAGTTTAATTATGAAGGGTTGAAGTGCAACAGTGGCTAACAAAAGAATTGGTATTGGTTTTCATTTAAGCATTGCAGTTTCTTTGGTTCTGGTTAGGAATATTTGTTTGTTTTAGGTGTTTTGTTCATAATTGAACTTTTATGCAACGCCTGTAACTTTTGCTCTTAGAAATGAAATTTCCTTGATATGAAAAATAGCTCAAAATGGTTGCACATTCTATGTTATTGCTATTATTTTCAATTTTCTATATCAATCAGTTCTAAGAGCCACACTTCCTAATGCAGAGGAAATATTATTGGAGAATGTTGAGCTCATTCTAGAGGCCTTTGATTATCTTCAATTGCCATTTGCCCTAAAGCAAGGTACTTTTAAGTTCATAAGCAAAATGGAAAAACTGAACATGTTTGGTATCGGTATCCATAACATGTTTTTGTCTTTTCATACACATATTTGGAATATGTATATCATGTTTTCTACACCTTGTTTCTATCTTTTTTATTCATCTTCAATCATTTGGCGCAAATTAGCATTGGGATGTTGCAACATTTTTCTTCCTCTAGTTTTGGAACAAATTGCTTTTGCTTGACTAACAATTGGTTGTCAGGATACTTTAGATTTGAACCTATGCACTCTTTATTGGGGTAAACGCTCTCCCCTTCAAAGATTACAGTTTCCTTAGTCACTTGTTGGTCATTTTTATAATTCATGTATGGTGGCTCGGTTTACCTTTTTTTTTTTGTGTATATTTCATTCCCCATTGTTTCTTATAGAAAAAAAAAACCTATTTTGTTTGGGTGGTTTTACTTCCAAAAACATCCCTATAAAGAAGAAAATATGTCTTTATTGCTGTACTCCCAATACCTATTTCATTATGGGGTTTTGCATGACTTTTTAAAAGGAAAAGAAAACGGACCACAATGTTTCTCCGTTAGGAAAAGGGCTCCCTATACCTCTTAGAAGGTGTCGTTTGCTGAGGCTCTGCAAAATGGTAAACAAGAGGAGAACTCTTAGTTGAAGGTATGGGATGCTTGTGTCTCACAACAAAAAAAAGCAGATAGAAGAGATGCATGACGTCTAAATTGGGAAGAAACCATAGTGATTTCGAAGGGACTTCCATGACGACTAGGGTAAGGTTCTTGAAACCCTCCAAGAATAGACTAAATTTCCCTTCATTATTAAATCCTTTCGACCTGACAAAACCCTCCTTACATGCCCTTAAGCGGAGTGTGCTTGTATTCTTGTTACAAATAATGGTGGGTTACTTTTGGGCCTATTACATTTAATTGGAGGTTTGGAACCCCATTCATGGTCAAATCAATGTTGTCCTTTCTTGGGAATTGGGTTAAATTGAGAAACATCCCCTTGCACCTCTGGTGCCTAAAAACATTTAAAGATTTAAAGCTGTGGGGAATGTCTTTGGAGGTATTTTGGATTATTCTGACCTGAATTCTTGTCTCATTGATTGCTTGGAGGTTGCAATAAAGGTTAAAGGTCACTACTGTGGCGTTCTTGCTTCTAAAATTAAATTATTCAATAGGAGGATCCCTTTCTTGGCTGACTGTATAAGATGGTATCTGATTGGTTGAAAAAAAAAAGTCGAAGGACATGGAGGCTTTTCGTCGGAGGCATCTGAAAATATTTATAGGGGTATGAAATGGGTCCTCGACAAATCTAGATGAATGGAAAGCTTTAGGATGACATCAATTGTCCGGAGGTTAAAATTTGGTATTTTGGCACCTTAGAAACTATTTCTCAAAGGACAATTTCAAAAACCACTTCCAATGGATCGATCATGTGATGCTGAGAATATGGATTTAATGGGTTCCATGAGAAACAATGATCAGATTAAATGCCCCCCATCCCCCCAAAATCATTTGAGCATCCTAGATCCCGTTGGGCCTTTAAACATCCAACTCCCTTTAAATCAGACAGAAAAAAAAGATAATTCTAAAGCGGTTTCTTTTTTCTAAGGATAATCAAGCCTGATTATTTTAGTTGAAAGGCCAAATCTTTTCCACAAATGGAGAAAAAGAATTTAAAGGTTAAAGCTCTAGTCCTCGAGATAAAGGGAAACAAATTTAAAACGAAATTTCATATGATATCTCCTTGGCTAGTCTGAATGGTAGAAAGGAGGAAGACTTGGTAATCAAAATTTCTAGGAGAGAAGACAATGATGACCTTCCAATGCGATTCCATCATTGCTTTAGAGAGGTGAGGCTCGTGGGAGATAATTTTCTTTTCTAAGACAATGAGGTATTGCTAGTAACCCCTCACTCGTAGATGCCAATTTCAAATTCGCACAAAGAAGGTTTGCAGGAAAAAGACAAGGATTCAAATGCAGAGGTAGAGGACAATGACGATCCCTTTTTACATTAAAGATGATTAAATCTCTGAATAATGGAAGTAATGCATTAGGCTGATTTCGTGTAAAGGCAGTGTGGTAGCATAGAAGAAATCGAGGGAAATCACGAATTACGTAAAGGGTTTGGAGATGGAAATTGATGTCGTGTAGTTTAGTAGTCACTGGCCATGACGTTTCCTTATAAAGATTATCTCTTGGAATATTAGAGGGCTCGATGCTCCCCTTAAACATGTTAAACCTTTGTTAATTAGAGTTAGCCTGTATGTTGGGATTCTCCAAGAATCCAAATTAGAGGAGTTAGACAGGAAGATTATTAACTCTCTCTAGAGCTCGAGGTATATTGGCTAGTGTCTTTTAGAGGATGTGAGAACTGCAAGAAGGATTCTTATTTAGTTGGTAGGAACGGTATTGAATTTTCCTACCTCCAATATTTCGATGATACAATCATTTTTTTTGGGGTCAAAATCAAGCTTTTTTTTAATGTAAAACTGGTGGGCCAGTATAGATTTCTATCAATGAAAATTCTTCCATTTCTTTCTAGCAGTAGTCAAATCATTTGCACAAAAACCATTATCTTTCAAATTGTTACCTTCCCCCCACTCCTATATGTGCAATGAAACAATCTTTCAACTCTTCTAGATATAGACTAAAAATTCAGCCATTTCATGCTTGATATGTTTTTTGGTTAATTTTAATAGTTTAAATAAAATTTTAAATTAATATTCTTAAGCTTCATTTTCTTTTTTTGCTATTGTAGGTCGTGTGGGGAGGTTAAGCATCAAGATTCCATGGAAAAAGCTTGGATGGGATCCGATCATTATCATTTTGGAGGATATATATATTTCTGCATCTCAACGGGATGATGAAGAGGTAATTATCAACTTTATATATTTTTCTTAGGTAACAGGTTCTTTGGATGTAGTGAAGGGGAGGCTTCCTCCCTCTAGAGGCAGGAGGGCTTTTTAGGAGGAGATGGGTGAACTTTTTGGTCTGTGTGGTTCATGTTGGTGCTTGGTTGGGAATTTTAATGTGATTAGGAGTCCCAAGAAAAGATGCAAGGGGGAACGAGACGAGATTGATGAGATAGTTTCATTGGTTCATTAAGGATTGTGAGCCCTTTGGTCTCCCTTATTTAATGGGAGATTTACTTGGTCCAATCGTAGTTCTCGAATTAGGATTGTCAAATTCTTTTTTTCAAAATGGTGGATGGATATTTTCCTCAAGGTGCGTCAATCCTTGGGACCTAGACTTACATCTTATCGTTGGCCTTCATTCCTTGATTTTGGATGTTCCAGTTGGGGTTTTGTCCTTTTAGATTTGTAAATATGTGGTTGGATTATCCCTCTTTGAAATCCTTTCTCCCTTCGTGGTGGTAGGTGAGAGTGCCCGGAAATGGGAAAGGTATTGTTTCATTGGTAAGTTGAGGGCTCAAAAAGAAGCTTTGGAAGTGTGGAATAGGGAGGTGATCGAAGATCTAAGTATAAAAAATCAAGAGGTCATGGGTAAAAACACAACTCCAGAGGAGAGGACCTCCCAATAAGGGCGTGTATGTGGAGGTGGTTAGAAGAGAGGGCGGTGAGTTGGAGACAAAGATCTAAGGTGAATTTGGCTAAGGAAGGGAATTCCAATTTCGCCTATTCCCATAGAGTTTCTAGTGGTGGATGAAGTAAGAACTTTTTATCCAATTTTCCTTGGATATTGATCTTGGGGAGCTGGCCTTGGGGATGAAGAGATTAAAGAAGTGCATTGATAATACAATTAATGAAGCCCAACCGAAGAGGACCCTCTGTCCAAGACCTGATCCAAGGTATTGACCCTTCCTTGCAAAACCTACCCAAAGAACTTCACCTTCTGCACCAAGGACTAGAGGCCATAGAAGGGAGGAACGGTATTAATTTTAGAAGAAGATTTTCAAATTAATAATATTCACAAACAAGGATAATTCTGTAAAATCACTACATGATGATTGAATAGACTTGATGGATATCTGGAAAAGAGTTTTGAAGTCATCAGAAACAGAGTACTTGTTATATCTTCTTCACCTAGATGGCTATGCTTCTGAAAATCAACCTCCACGTTACTAACTAATATCAGAATCACAATCTGAGACCTCAATGTAGGGGGGAGAGTGATCATTGTGTGGGAATTTGTTTTAGAAGAAGATAGTAAAACCTTATCAAAATGTGTACCATTGAGCCCAATATTACAGCGTTCCACAACTACGTTGTGTGATAAATCCTTTGGAAGATCTTCTTTCTTTGGGTTGAATGTATCACTTTATGAACCACTAACTTTGTACAAGACTCTTCCACAATATTGACGTTAAGTTGGGGGACGTTTGGATCTTGAGAATCCAAAACACAAAGGGGTATATCGATAGAAACAAGGCGTAGAGTGCTCGATCTCCACAACCACTTATCCTCCAAAAAATTTGTATTCCTCCCATCCCCCACCACATTATGAATAAACTGGGAAGCAAAGGAAACTTCATCAAAATATCTTTTCAAGGGTTTTTGGAGGTGCCTTTAGCCCCACCATCAGTCCAATCAAAGGGATGAGACCCATACTTACTAACAATAACCTTGTGCCATGAAGTGTCGGCTTCATGATACAATGCCAGAAGCTATTTAGTCAACTGGGCCGTGTTCTCACGTTTACTCTACTTATTTATGGGTTTTCTGTACTAGCTTCTATTATTTACATTAGATTGGTTCATCTCCCAGTATTGGTTATTTAGGGTTCCTGCTGGCACACATATATATAGCATTCAAAAAAGCACTCTGGTTTTTTGGCACATAATTGAAGAATTCGAAAAACAACTTGGTTTAGTGGCTTTTGTGCATTTCTTTGGGTGATTTGGGCAGAAAAAACAATTTTTTTTTTAATAATAATCAGAATCAACTTTAAGTTTTGCTCGTGATAAGCTAAGTCTAAATTGTGTTTTTTTTTAATTACTTTTTTTCTTCTAGTTTTTCTACTATATCCGCCACTTGTAGACTCTTTTTGAAACTCGTTTGGCCCTTTGGATATTTCATATCTCAATAACTAATTGTTCTTTGGGATTTCTTTATTGGAGGGCTCAATAAACATAATTTACTTGGTAAAACTATTGAGTTAACGTGCAGCCTTCCAGAAGGAGAATGGATAATTTTAAACTTAATATCCCATTGTGAAATTGCTGGATATCTTTTTCTTTGTTCCAGTGGAGCTCAGATGTGGTTGAAAAAAGAGAATTTGCTGGGAAGAAGGCCAAAATTGCTGCTGCTGAGCTGGCAAAATTATCACGGCGTGTAAGTGGTGAGCTACTTGGCTTCCATTCATTGCATTGTCAATGTCCTTTTTTTTTTGTCTTTTTTATAAACATTTTTCATTTATGTCCAATTTATGAATTCAAAGTCCATTTATTTTTATTGGTTTGGAGTTTCCTTGATGGGGTCCAGAATGAGAAGAAAGTTATATGGGTCCAATTTATTAGGGTTTTTTTGTGGTCTTTGTGAATGGTAAGGAACAACAAAGCGTTCAAGGATTGAGAAAAGTATTTGATAGTTTTTTTGAATCCTCATCTTTTTTGGCTTTCACAGTGTAAAAATTCCGTGCTTTTTCATAGTTATAGCTTGATATATTTTATATTCAATCGGAGTTCTTTTAGCACCCATTGGATTGTGGATTCTCTTGTCCCATCTTTTGTAATTTTATCACATCAATGAAACCGTTTGGAATTTCCTTAGTCAGCACTTTTACTCATGAAATTCAATTTGTAAATATTAATGAGGTATGCTATCAGTTAGAACGAAGGAATAGAAGGATTTCAAGAATAAAGGTGAAGATATTGCATCTTCTTGCGGCAGATATAAGCTACTTGCACATTGAGTCTCTGGGTTTTGGTTTTTCTCTTGCTTTTCTTTATCAAAATGGAGTTGTCTTCGTTGCAGCTTGATTTCATTTGAGACTCAAAACCATAAGTTGCAAGTTTTTCCTTGATTGTAGAAGAATAAATAGAAGTTCATAAAAATTCTTGGATTTGGATGCAACAGAGTTATAAACCAGTTCTCATTGTCGTAATATTCAAGGAAGCTTTAGGCTTGAAAATTAATCTCTCCAAGTCCATGGCCTCGGATTAGTTTGAAGTTGCAAGCTGGTTGTCTTTTCCCTTTTGCATTTAGCAATGTCCCATGGTATCAATACTTGAACTATATCTTCTTCTAGAGCCTTCTTATTGAGAAGATTGAACTCATGAGTAATAAATGGAATAAAGGTCATATTTCCAAAAGGTGGCTGATTAACTTCAATTTAATCTCTGGTCTTCAGTCTTCCAACCTATATATTTGTTTTTATTGTTATGGTTATTATTTGGATAAGGTACGCAACTTGTTATTGAAGAAATGAAAAGAAGCGGCTCAAAAGATACAAACTCAGGGAGTGAATTGAAACAGAAAATAAAGAAAATATAAATGCATCCCGATTCAAATTAATATCTAGCAAACAAGAATCCAACAAAAGACTTGTTGAGAGAACACGATGAAAAAAGCTTTCAATTTGCTGATTCAAGACGATCAAGCCAAGGAAGATATCACTCCAATTATTAATTCCATTAAAAATAAAATGAAGAAATGTATATAAGACATATCGTGTGGGGACTCTTAGAGATGGCAACTTTCTGCAAATTAGGTAGAATTTGGTAAACACTTTAAGGACCAAGCTGATTTTGGCGTTGGTTGGATTTGGTTGAGTTTGGTACTTTAATCTAACTTGTCTCTACTCTATTCCAAGCTCTATAGCTTATTCTTGTCTTTAAGCTAGGCCAAAGCTCTCTTGATACTTAGCTGCAACCGTCTCAACCTTCATGATTCACAGTTCCACAACTTCAATGAGATCTCAAAAGATTCTTTTAAGTCTTGATGAAATGTTGCCTTTTTCTAATCCTCCTTGGATTAAAGACCAAGATATGGTGAAAATGAATTTCAGCGAGCTAATGGTTGTTCTAGGTTGTTTGCTTACAAGAATTGGAAGGAGATTTAAAATGTTTTCGAAGATTATTTTAAGGATTTTGTTTCAATTAATCCCTTCATGGAAAACAAGACTTTACTATAATCCCTTCATGGAAAACAAGACTTTACTAAATTTTAAGTGTGGAAATTCATTAATGATCTTGAATTTGAAGGTTGAAGGTAAATGGAGACTCGATGGTGAGTTTTATTTGCTTATTGAAAAGTGGGCTCGTGAACAATCATCCAAATTTTGTTGAAGGTTATGGTGGATGAATCTCCATCAAGAACTTGCCAATAGCCAATTGGGATCTAGCCTAGTCAAAGTTGTCTGACCATTACTTTGGTGGTCTTGGGAGTTTCTTCTCACACTCTTTATATATGAGATTGCACTGATGCCTGTATAGAAGTCAAAAGGACTTTGTGTAGTTTTCTTCCAGCTACAATTGAAATCAATGATAAAAAAAAGGGAATGTGTATAAGATTTGGTGATGTTAGATCCTCCAAATATCATTAAGAGCTCCTTGAATTACTTCTCCAATTCTCTGGATTTACATCGTTTACATCAAATCACAGGACTTTTTAACGTGAATGATGATGTATTGATCTTCTACCAACTTTAGTTTCAGAGAATAGGGAGATTGTAGTCGCTGAGTTAGTGATGAGTGTTTTTAATGGGTTTACTGTTCATGATCAGCTAACATTTTTTTTTTATGTGATGCTTGCTATCATTTACAACCTTTCTCCCGTTGCAGCATGCTCTGAGATTCTTGAGTCCTTTTTGAGGAATCTATTAAATTTTCGAGTCCTCAAAGCTCTTGACTGCTAGTGACGTTAAAAATTGTTATCCTACTGCTTGTCCATTATACTATACTCAGAGAAGTGAGGTTAAAAATTTAATTAGTGCATAAAAATTAAATTTACCAATAAGTTAAATCATATAAGTCCATTTAAAGAAACCCAATAAAGAGCAAATGCCCAACTTGCCAAACTCCAAATAAAAAGTTTCAAAAAGCTGTATTTTTTTTTAAGACCCGAATTATTTCTTCTTCCTTTTTCTTCACCTTTTGTTTTTGTGATTTCCCTCCCCTCCTTGGTGCCGTTTTCGACTGCCTTTGACAAATGGTGTTGCCTCTACTTTTATGTTTTGAGCTTTTATTTTGTAGGTGTGTCCCTTGCTTGTTTGTGGCGTGTCCACCCCGTTCAAATTTTAAAAAAAAGACATGGAATTTACGTGTTGGACACTTGTCTGAGCGTGTTTGAACATATCCGTGTCTGACTCGTGTATGACACAAACTCTTGTTAAAAAACAGAGGGTCCATGCTTCCTAGGCTTTTGGAGTGTTGAGATCGAGCATATGCCACATCATCCTTGGATCTCCTTGATGTGGCTTGAGGCCATGTATCTTTGTTGCATGCATGTGCTCTCCATGCTCTACTCATTCATGCACTTCACTGTGCTCTTTTAGCACTCGCAACGAGTCCCTATACCTTGCATATGTTTGCCCAATGATATGATGCATTGTGCCACTTGTCCCTTCTTGTAGCAACATGTTTCATATGATCTGAGGCTTCTAAGATATTTGGCACTAGCAGAAGCCAACCAATTCCATGCTTTGTAAAATACAATTGTTTCTAGTTTATTTCCATTACTTAACTCGGTTTTCTGCAGGTGATTTGTTGATGAACTCAGCTTACTTATAAATAGCATCCTGCTTGTGTGACTAAAGATTGCTTTGAATCATCAAATGAGATCACATTGCACTACTTCATGTATTATTTTTGTACCATTTTGATTTAAACAAATTGAGTTCTGATTTACTGCGTTCTTTTTTTTTCAGTATTGTTTGCCCTGATACATTTTGTTTAAATCGTGTCCCAAAAGTAGGTTAAAATGTTTGTCGGGAAGTTCTCTTGTTACTAAAAAAAATAACTTCTTTCATGCTCCTTTTCTGCAGATAATCAGGCTGGGCAATCATTTATCTCTTACATTACTGCAAAGGTGATGCTAATTTCTTGCCTTGTAACATATCTTAGTGTCATTTTATATGCAGTGTTTTTTAAATGTTTATATGATGTTTTTATTCATGTTGAATTTGGATTTGGTCATATTGTGCATGTGCTATGTGCTATGTGCTATGTGCTCATTCATATGTATATGCTCTTGAGACGAGTAAATTTAGGGACTGTTTTGTTGTACGAGTGAGAATTATTGGGCCTACGGGCTGAATTGTTGGTGTCCATTATCAGGCATGGAACTTGCAATACCAAATTTTTTATTCTAGAATAAGTATTATCACGTTTTTTTTTTAATTTGTATATATTTGATTTGGTAGATTTCTTATTATTCGTTTGTTGTCATATGTGGTTCTCGTGTGTTTATATATGTTTTGGATTTTAGTATTCATAATATGATCTCTTTCTTTCTTCTTAGATTCTTGACAACATTCAAATATCCATTAGAAATTTTCACGTCATGTTCCATGATATGACTGGTGACCTGGTAAGTCTTACCTATTATCCTCATTTCTCGTCATATGTTTTTCAATTATCAGTATGTTTGGTCTTTATTGGTTATTGTTGCAAGTCTAAATTAGCTTGCCGTTTTTCTTATTTTATTTGAGAGAGGTACATTTGATTTTTGCCATACACAAATGATAAAATAAATCTTAGATATCACGTAACAAGATAAGATAAATATAAATAAATTTTGTAGATACTAGCTAACAATATAGATAAGATTAATTACTTTCCTTATTTAATGAGATTGCACAAATATTCCTTAAATCAAAGCTTTTTTTTTTTTTACACTCCCCTCAAGTTAAGGAATAGATATTATCCATTCCCAGCCTGGATACTAAATCTTCAATATATGTTTTTATTGTTTCTATTGTAAAGAAAATATATTTTATAAATATGTTGAGGTCTCTACAAAAAANCCATGTTTAAAAAAAAAAAAAAAAAAAAAAAAAGAAACCTCTTAGAAAAACTAAAAACTAGAACGATTAGCCTCTTTGCATTTATTTAATATATATTTTTTCTTGTTAAAAAATTAATAAGAATAAACAATAATAATAATTAAAAAAAAAAGGCAAAACTGGGTGGAGATGGAGAATTGGGCGTGGGGGAGGGGATTCCGTTGAGCTCATGGGAATTTTTTCCCTTCACTCTTCCATTCCCAGCTCCCTTCTCAGCAGAGAAAACGAGCATCCCAGTAGGGAGAGAGAGTGAAAGGAAGAAGAGTTGTTGAAACTTGAGGGTTAGATGTGAGGGGGATATCCTACGTTGGCCAGATGATGATAGGAGAGGTGGGAACCCTATAAGAACCCTACAAGTATACCACCTTCCTTCTCAGCCAGTTTATCCAATTTACTGGACTTTTGATATTGGTCCTTCAAGTCTCTGACTCGTGCCCTTTGAAGTTGAAAGATTCTTTAAGATTCAAATTTATCTTAACTTGTCTTCTATATGGGGGACAATGGAATTCCCACATAGCAACATGTCATCCCATATTCAATACACTGATATGAGTATGTGAATATTGAAGGAAAATTTTGCACCTTTAACACTGCTCATTTCTCCATAAGGCATTTCTTACACCTTTTCTCTGTAATAGAAGGTATGATATTGTTTCTCGAAAACTAATGTTTGATAATTTTCTTTTGATGTTATTGATATTTCTCTACTTTATTTATCTTTTGGAATTTGTCTCTCGAGGGGAAAAAATGAAATACCAAGGTGTATCTGAGATTTTCTCTTAGTTGCTTATACTCCAGTGTCATGATGATCTCATTGTATTCCATGTTGCTGCGAGGCTGCAGGGACATATAAAGCTCGGTTTGAAGTTTTCCAGCCTGAAGATAATGAAGCAAATTTTGTTGGGGTAATTATTTCCCTCGTTTATTTAATTTCTTCTCATGTTAGTTCCTGTGAGTAATTATGTTATGTGGATGGTACGCAAGTACGTTTACTCTCTTATGGTGCATTATTTTCCAGTTGAAGCTGATATTCATTTTAGTAAGATAATTTGTTCTTTTGCTATTGCTATTGGTGTAATATATTTCTTTGACTATTACTGTTTGGCTTTAGACTAAATGCTTGAAATTACCCTCATGTTCAATGCTATCCGTGCAACTGTTATCGTTTTTGGCTTTGTCTTGGTGCAAAGATTACCCTTACTTGCACAATTATGGCGGCCTCTCCTTTCTCACTTCCTAATTGAAATGCTGTTTACAATTCTTTTGGATGGGAGAGATTTTTCTTCTTTTTTATTATGATTGAACAGGTTAGTACAATTATTCAAAGTAGACTCAATAAAAGCAAAAAAGAAAGAGGGAAAGCTAAAGATAGCCCCTATGCAAAAAGTCCCACATTATTACAAATATCATCAAGAAAATAGCTAACAAAACTTTAGGTAAGGAAGACCGAATGATATCTTCCTTTGACGGTTCAAAGAAGATCTTCCTTCGGCAGCAATTTCTGCTTCAGTTTGTCAGTTTGTCCTTCGTGCATGCTGAATTAAGATCAGAATCATTCTTTTTTTCACTCTCCATTTTCAAAGGTTTCCAGCTCCAAATTTCAGCATCGTTTATGGTCCATATCTTCCCACAAAATAAAATATTCTTTGGAGTAATGCTACTAAAGAAATCTTTCTATGTTTGGGTTAATTGTTTTGACCTTCCCTCATCACGACTCTTTTTTTTCCCTCCCTTGGCTCGACATACAGCTTCAGATTGAAAAATTAGTTTGGAAGAGAGAAGACTGCTGAAATTTTTAGAATTGACTGCCGATCTGTATTTGGTCTTGACTTTTCAGCCACAAGTTAAAGACAGCACCAGAATAATGCTCCTATCCCAACTCCATTAACAATTTTTATAATGCACATTTGTACATCTGACTGTAACTAAATAGAATAAGCATTTTATGATGAACTACTTTTTAGAAAATGTTCAAAGAAGATGCTTTAATGGATAAAGTAGAAGCCTCTCAGCTGACTCCTAAGATAAGGCCATGTCACTTACCGATCATTGTATCCTGCCTCATCCAACCCTGAACGTTCAGCTCTTGAAGGAAGCAAGGGATGCAAAAAGTAAACATGTCGTAGTAACATCAGTACCTAGCACTTCATCATGTTTCCTTCTAACCCTTAACTTATTCCGTATTCATTTGCCCACTACTTCCTCTGTGGGTTTCGATACTGGCGTGAGACATCGGGCAAGAGTAGCCCTTGAAGTAGAAGCCCCTCAAATGACTCTTAAGATAAGGCCATGCCACTTACTGATCATTGTATCTTGCCTCATCCAACCTTGAGAACGTTCAGGTCTTGAAGGAAGCAAGGGATGCAAAAAAGAACCATGTTCGTAGTAACATCAGAACCTAGTGTCATAGTCGACTTTTTCAACCATGCAGTGTCGTGATCTTGACACGCTCATGACCAGCCTTGAGGGGAACTCAAGCCCCATGTTCATTTTTCTCCCATATTTGTGGCTTCATCAGACCTTAGGTGAGGTTTTTCTTCGCCTACCGAACACAACTTGTGCGGAATCCAAACTTGTTCGGCCACACATGTTGCCTACATGCGTATGTTCAGTGGTCTGCGACCCAATCGACTTGCCTCTACACTAGGCCGAGTAATCCGGTTCGACCTTGCCTCTACACTATCACAGCCGACTCGGTCATGCCATCAAGAATGGACCCACATGTCTTTCATAATATTGGGACATCCAAACATCCATCCATCCATCCATCTGGGTTTTATCGAGGCATTGGACCTTCCCGTATCCATGCTATATCGTTTACGGATTCCGTATCGGATAATAGGTGTATGATCCAACCTTTGACACATTGGCTGGGGCACAATGTCGACACACTCGTGTCGTCCGACATTGTTCTTGAAAATTCATTTTAAAGGAAGTCACTTGACACACTTGTCTCACAATGCTCGCCCTCACTGTGACGCGCGTATGTGCCACATGGTAGTTCGCTTAGGCCATAGGGCCTAGGGGTGGTGGAGAACTGACACCACGTCTCCTCCTAAGGTACATTATGTGGCATTTTCAATCTGGCAGATGTAGACATGATCTTGACGAACGGTAATACGGTGTTGTGGAGCGTCCATTCGGTGCTCGATTGACACCCAATTTGGCGAGTTTTCATATTTTATATGGACGGACTTGAGTTTAGAACGCATGTGGAAATTCCCTCAAGAACCCCGACTTTTGAAGTTTAGGCCTAGGGCCCTACTTGGCCCTTCAACAAGCATATATTTGACACTCTTGTTTACTCGTTCCTCCTTCTTGCCTATGCTTCGACTTGGCTTCAATGTACACCGTATATGGTATGTTGGATGATGCCCCATCCTCCTTGGTCGCATCGTGACTCTGTCTTTTCTCGGCCCTCGCGTGACCGGTTGGGCGCTACTTTGTGTTGCCACCTTGTCATGACTGCATGTGAGGGTTACAACTCTTCATAGAATGGTTGTGACATCTATCACTTCATCATGTTTCCTTCCAACCCCTAACTTATTCGGTATTCATTTGCTCACTACTTCCTTTGTGGGCACTGAATTTCAATACTAGCACGAGACATCGGGCAAGAGAAGCCACCCCCCTTTGTTGAAGAACTTGAGCATTCTCATGATTTATTTTTCTAAACTTTGCTAGTTGAATGAATGAAAACTCTAAGCTAATAATTATGTCAATAAAAATTCTAGAATCAATGTAGATTCCCATGCACGACTATTTTTACTTTTGACTCCATTCAAAATCAATTTTAATCGCCTAAATAAAATTACTCTCCCAAAATTATACCAAAGTTGCTAGAACAATTACGCATTATCGGTTTTACAAATACTCTTATTAATGGAAATTACTACATCTATTTGATACTTGTATTTTCCAATAATTTTACTAGAATTATGTATGTGCTAGAATTATGCATTTAAGTTTGGAGTTTAATTGATTGAGCCCCAAAGAAGTCTTATATATGTGTTAGAATTATGCATTTAAGGGTTGAAAAATAAAATCTTAATGGAGGGTCTAAATTTTTTATATAGATTAAAATTGATACAATTTTTGTTTGGAGTTTAATTGATTGAGCCCCAAAGTTGTGTGGTATAAATTGATTTTTTTTTTTCTTTCGGAAAACCTTTGTTTTCCTCCACTATTTACTCCTGAAGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCGAAACATTTATTTATTTGCATCTTTTCAACAATAACTTGTTCTTTGTTCTGAGAAGAAAAGGTTTTGTTCTTTCCATATGGTAAATTTGTTATTTGTTTGTTTAGGGTTTTTGAATGTTTAGTAGTTCTCTTATCATGACAGGTAAAATTTTGCAGCTTGGATAGACATGCTATGATATTATATTAAACATTGAACTTTAACTTATGTAAATTTTGATTATCTCATTGTCAAGGGCATTGGCTGGAAGGACAAGAGGAAGCCAAGTCAATAA

mRNA sequence

GTACAAAACTCACCGGAGAAACTTTCAGGAGGAAGTAGCGGCAAAATTGCAGAGAGAGAGAGGGAGCCGGCGAGATTGAGACGAAGGGTGGAAAGTGTGAGAATGTTTGAAAGACTTGTTGGACAGTTACTTGTGGGTTATTTGGGCAGATATGTCAAGGATATTCAGAAGGAGAAGCTGAAGATTACGTTTTGGAACGAGGAAATATTATTGGAGAATGTTGAGCTCATTCTAGAGGCCTTTGATTATCTTCAATTGCCATTTGCCCTAAAGCAAGGTCGTGTGGGGAGGTTAAGCATCAAGATTCCATGGAAAAAGCTTGGATGGGATCCGATCATTATCATTTTGGAGGATATATATATTTCTGCATCTCAACGGGATGATGAAGAGTGGAGCTCAGATGTGGTTGAAAAAAGAGAATTTGCTGGGAAGAAGGCCAAAATTGCTGCTGCTGAGCTGGCAAAATTATCACGGCGTATTCTTGACAACATTCAAATATCCATTAGAAATTTTCACGTCATGTTCCATGATATGACTGGTGACCTGCCTGAAGATAATGAAGCAAATTTTGTTGGGGGCATTGGCTGGAAGGACAAGAGGAAGCCAAGTCAATAA

Coding sequence (CDS)

GTACAAAACTCACCGGAGAAACTTTCAGGAGGAAGTAGCGGCAAAATTGCAGAGAGAGAGAGGGAGCCGGCGAGATTGAGACGAAGGGTGGAAAGTGTGAGAATGTTTGAAAGACTTGTTGGACAGTTACTTGTGGGTTATTTGGGCAGATATGTCAAGGATATTCAGAAGGAGAAGCTGAAGATTACGTTTTGGAACGAGGAAATATTATTGGAGAATGTTGAGCTCATTCTAGAGGCCTTTGATTATCTTCAATTGCCATTTGCCCTAAAGCAAGGTCGTGTGGGGAGGTTAAGCATCAAGATTCCATGGAAAAAGCTTGGATGGGATCCGATCATTATCATTTTGGAGGATATATATATTTCTGCATCTCAACGGGATGATGAAGAGTGGAGCTCAGATGTGGTTGAAAAAAGAGAATTTGCTGGGAAGAAGGCCAAAATTGCTGCTGCTGAGCTGGCAAAATTATCACGGCGTATTCTTGACAACATTCAAATATCCATTAGAAATTTTCACGTCATGTTCCATGATATGACTGGTGACCTGCCTGAAGATAATGAAGCAAATTTTGTTGGGGGCATTGGCTGGAAGGACAAGAGGAAGCCAAGTCAATAA

Protein sequence

VQNSPEKLSGGSSGKIAEREREPARLRRRVESVRMFERLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWSSDVVEKREFAGKKAKIAAAELAKLSRRILDNIQISIRNFHVMFHDMTGDLPEDNEANFVGGIGWKDKRKPSQ
BLAST of Cp4.1LG18g02450 vs. Swiss-Prot
Match: VP13F_DICDI (Putative vacuolar protein sorting-associated protein 13F OS=Dictyostelium discoideum GN=vps13F PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.5e-18
Identity = 39/100 (39.00%), Postives = 64/100 (64.00%), Query Frame = 1

Query: 35  MFERLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGR 94
           MFE +V  LL  YL  Y+K +  + L I+ W+  + LEN+EL   A +   LPF +K+G 
Sbjct: 1   MFESIVSNLLTRYLKEYIKALNTDNLNISIWSGNVSLENLELKSRALEKFNLPFTIKEGF 60

Query: 95  VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWSSD 135
           +G+LS+KIPW  L  +P+I++++ +YI+AS +    W+ +
Sbjct: 61  LGKLSLKIPWNNLKTEPVIVVIDQLYITASPKSTTVWNEE 100

BLAST of Cp4.1LG18g02450 vs. Swiss-Prot
Match: VPS13_YEAST (Vacuolar protein sorting-associated protein 13 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VPS13 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.9e-17
Identity = 51/174 (29.31%), Postives = 85/174 (48.85%), Query Frame = 1

Query: 35  MFERLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGR 94
           M E L   LL   LG YV++    +L +  W+ ++ L+N++L  +  D L LP  +K G 
Sbjct: 1   MLESLAANLLNRLLGSYVENFDPNQLNVGIWSGDVKLKNLKLRKDCLDSLNLPIDVKSGI 60

Query: 95  VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWSSDVVEKREFAGKKAKIAAAELA 154
           +G L + +PW  L   P+ II+ED Y+  S R ++  + + + KR F  K  K++  EL 
Sbjct: 61  LGDLVLTVPWSSLKNKPVKIIIEDCYLLCSPRSEDHENDEEMIKRAFRLKMRKVSEWELT 120

Query: 155 KLSR----------------------------RILDNIQISIRNFHVMFHDMTG 181
             +R                            +I+DN+Q++I+N H+ + DM G
Sbjct: 121 NQARILSTQSENKTSSSSSEKNNAGFMQSLTTKIIDNLQVTIKNIHLRYEDMDG 174

BLAST of Cp4.1LG18g02450 vs. Swiss-Prot
Match: VP13B_DICDI (Putative vacuolar protein sorting-associated protein 13B OS=Dictyostelium discoideum GN=vps13B PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.5e-16
Identity = 46/167 (27.54%), Postives = 91/167 (54.49%), Query Frame = 1

Query: 35  MFERLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGR 94
           MFE LV  ++  Y+G Y+K++  E+LKI  ++  ++L+N+E+  EA    +LP  +++G 
Sbjct: 1   MFESLVADIIAKYIGEYIKNLSSEQLKINVFSGNVVLKNLEIKGEALQSFKLPLHVQKGI 60

Query: 95  VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWSSDVVEKREFAGKKAKIAAAELA 154
           +G L++KIPW  L   P+I  ++ I + A  +   +++ +  +K +   K+ K+   EL 
Sbjct: 61  IGTLTLKIPWTNLKSSPVIFDIDCISLYAIPQTGFDYNEEEEKKNQLELKRKKLEKFELI 120

Query: 155 K---------------------LSRRILDNIQISIRNFHVMFHDMTG 181
           +                     +  +IL+NIQ+ I++FH+ + ++ G
Sbjct: 121 RSFKEGSGADQKTTKQDTFMTSVMTKILNNIQVKIQSFHLRYEEIKG 167

BLAST of Cp4.1LG18g02450 vs. Swiss-Prot
Match: VP13B_SCHPO (Vacuolar protein sorting-associated protein 13b OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vps13b PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.0e-14
Identity = 50/162 (30.86%), Postives = 82/162 (50.62%), Query Frame = 1

Query: 35  MFERLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGR 94
           M E L+   L   LG Y+++    +LK+  WN ++ L N++L   AF  L+LP +++ G 
Sbjct: 1   MLEGLLANFLNRLLGEYIENFDATQLKVAVWNGDVTLRNLQLKRSAFRKLELPISVQYGL 60

Query: 95  VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWSSDVVEKREFAGKK--------A 154
           V  L++KIPW  L   P+ I +  I   AS  ++ +  S+V   +    K+        +
Sbjct: 61  VEELTLKIPWSSLKNKPVEIYIVGIRALASMEENVKSQSEVDPHQVLESKRRQMQLWEAS 120

Query: 155 KIAAAELA----------KLSRRILDNIQISIRNFHVMFHDM 179
           +I  AE A           L  R++DNIQI+IR+ H+ F  +
Sbjct: 121 QIGKAETAYDPKTQTFTESLITRMIDNIQINIRDIHIRFEHL 162

BLAST of Cp4.1LG18g02450 vs. Swiss-Prot
Match: VP13A_DICDI (Putative vacuolar protein sorting-associated protein 13A OS=Dictyostelium discoideum GN=vps13A PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.6e-13
Identity = 49/170 (28.82%), Postives = 87/170 (51.18%), Query Frame = 1

Query: 35  MFERLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYL--QLPFALKQ 94
           +FE LV  +L   LG YVK++ K++LKI  +   + L+N+EL  +A   L   LP  +K+
Sbjct: 2   VFEGLVSDVLSRVLGEYVKNLNKDQLKIGIFGGSVQLQNLELKEDALANLPINLPITVKK 61

Query: 95  GRVGRLSIKIPWKKLGWDPIIIILEDIY-----------------------ISASQRDDE 154
           G +G+L +K+PWK L   P+II ++ IY                       +   + ++ 
Sbjct: 62  GFLGKLDLKVPWKDLKSKPVIINIDCIYALAVPQTQNYKYDEKEEAKKQAELKKKKLENY 121

Query: 155 EWSSDV--VEKREFAGKKAKIAAAELAKLSRRILDNIQISIRNFHVMFHD 178
           EW   +   E+ E +  +++ + +   +L  +I+DN+QI I   H+ F +
Sbjct: 122 EWIKSIKDAEENEISSLQSEKSDSFTDRLVTKIIDNLQIVINKVHIRFEN 171

BLAST of Cp4.1LG18g02450 vs. TrEMBL
Match: W9QCF3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010462 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.0e-60
Identity = 119/164 (72.56%), Postives = 138/164 (84.15%), Query Frame = 1

Query: 35  MFERLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGR 94
           MFE  V QL++GYLGRYVKDIQ E+LKIT WNEE+LLENVEL LEAFDYLQLPFALKQGR
Sbjct: 1   MFEGFVRQLILGYLGRYVKDIQSEQLKITLWNEEVLLENVELTLEAFDYLQLPFALKQGR 60

Query: 95  VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWSSDVVEKREFAGKKAKIAAAELA 154
           VG+LSI+IPWKKLGWDPI+IILED+++ ASQRDDEEWSSDVVE+REFA KKAK+AAAELA
Sbjct: 61  VGKLSIRIPWKKLGWDPIVIILEDVFVCASQRDDEEWSSDVVERREFAAKKAKLAAAELA 120

Query: 155 KLSRR-----------------ILDNIQISIRNFHVMFHDMTGD 182
           KLS+R                 ILD+IQ+SIR+FHV++HD+ GD
Sbjct: 121 KLSKRVCDNRAGRSFTSYISAKILDSIQVSIRSFHVLYHDIRGD 164

BLAST of Cp4.1LG18g02450 vs. TrEMBL
Match: A0A078DG18_BRANA (BnaA06g27210D protein OS=Brassica napus GN=BnaA06g27210D PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 7.1e-58
Identity = 115/167 (68.86%), Postives = 139/167 (83.23%), Query Frame = 1

Query: 35  MFERLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGR 94
           MFE LV +LL+GYLGRY+KDIQ+E+LKIT WNEE+LLENVELILEAFDYLQLP ALKQGR
Sbjct: 1   MFEGLVQKLLLGYLGRYIKDIQREQLKITVWNEEVLLENVELILEAFDYLQLPIALKQGR 60

Query: 95  VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWSSDVVEKREFAGKKAKIAAAELA 154
           VG+LSIKIPWKK+GW+PIII LED++ISA+QR D+EWSSDVVEKREFAGKKAK+AAAELA
Sbjct: 61  VGKLSIKIPWKKIGWEPIIIKLEDVFISATQRSDQEWSSDVVEKREFAGKKAKLAAAELA 120

Query: 155 KLSRR-----------------ILDNIQISIRNFHVMFHDMTGDLPE 185
           KLS+R                 +LD+IQ+SI+NFH+++ D   +L +
Sbjct: 121 KLSKRVFDSPAGNYVTSYIAAKVLDSIQLSIKNFHIVYSDAQSELEQ 167

BLAST of Cp4.1LG18g02450 vs. TrEMBL
Match: A0A068VB32_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00019460001 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 7.1e-58
Identity = 116/161 (72.05%), Postives = 133/161 (82.61%), Query Frame = 1

Query: 35  MFERLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGR 94
           MFE LV QL++GYLGRY++DIQKE+LKIT WNEE+LLENVELILEAFDYLQLPFALK GR
Sbjct: 1   MFEGLVRQLILGYLGRYIRDIQKEQLKITLWNEEVLLENVELILEAFDYLQLPFALKHGR 60

Query: 95  VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWSSDVVEKREFAGKKAKIAAAELA 154
           VG+LSIKIPWKKLGWDPIII+LED++ISA QR+D+EWS D +EKREFAGKKAK+AAAEL 
Sbjct: 61  VGKLSIKIPWKKLGWDPIIIVLEDVFISACQREDKEWSVDEIEKREFAGKKAKLAAAELG 120

Query: 155 KLSRR-----------------ILDNIQISIRNFHVMFHDM 179
           KLSRR                 ILD IQ+SIRN HV++ DM
Sbjct: 121 KLSRRVCDDHAGKSFSSYITAKILDGIQVSIRNVHVLYRDM 161

BLAST of Cp4.1LG18g02450 vs. TrEMBL
Match: A0A087GCZ4_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G423700 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.6e-57
Identity = 117/160 (73.12%), Postives = 136/160 (85.00%), Query Frame = 1

Query: 35  MFERLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGR 94
           MFE LV QLL+GYLGRY+KDIQK++LKIT WNEE+LLENVELILEAF+YLQLP ALKQGR
Sbjct: 1   MFEGLVRQLLLGYLGRYIKDIQKDQLKITVWNEEVLLENVELILEAFEYLQLPIALKQGR 60

Query: 95  VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWSSDVVEKREFAGKKAKIAAAELA 154
           VG+LSIKIPWKKLG DPIII+LED+++ ASQR+D+EWSSDVVEKREFAGKKAK+AAAELA
Sbjct: 61  VGKLSIKIPWKKLGRDPIIIMLEDVFVCASQRNDQEWSSDVVEKREFAGKKAKLAAAELA 120

Query: 155 KLSRR-----------------ILDNIQISIRNFHVMFHD 178
           KLSRR                 ILD+IQ+SIRNFH+++ D
Sbjct: 121 KLSRRVFDSPAGNPFMSYIAAKILDSIQVSIRNFHILYSD 160

BLAST of Cp4.1LG18g02450 vs. TrEMBL
Match: V4T0K9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012577mg PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.1e-57
Identity = 118/164 (71.95%), Postives = 135/164 (82.32%), Query Frame = 1

Query: 35  MFERLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGR 94
           MFERLV QLL+GYLGRYVKDIQKE+LKIT WNEE+LLENVELILEAFDYLQLPFALKQGR
Sbjct: 1   MFERLVRQLLLGYLGRYVKDIQKEQLKITLWNEEVLLENVELILEAFDYLQLPFALKQGR 60

Query: 95  VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWSSDVVEKREFAGKKAKIAAAELA 154
           VG+LSIKIPWKKLG DP+II LED+++SA QRDD+EWS D VE+REFAGKKAK+AAAELA
Sbjct: 61  VGKLSIKIPWKKLGRDPLIISLEDVFVSACQRDDQEWSMDAVERREFAGKKAKLAAAELA 120

Query: 155 KLSRR-----------------ILDNIQISIRNFHVMFHDMTGD 182
           KLSRR                 +LD+IQ+ I NFHV++ +M  D
Sbjct: 121 KLSRRVSDNYAGQSFTSYITAKVLDSIQVYISNFHVLYSNMKLD 164

BLAST of Cp4.1LG18g02450 vs. TAIR10
Match: AT5G24740.1 (AT5G24740.1 Protein of unknown function (DUF1162))

HSP 1 Score: 203.4 bits (516), Expect = 1.4e-52
Identity = 101/152 (66.45%), Postives = 125/152 (82.24%), Query Frame = 1

Query: 43  LLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKI 102
           LL+GYLGRY+KDIQK++LKI+ WN E+LLENVEL  EAF+YLQLP ALKQGRVG+LSIKI
Sbjct: 12  LLLGYLGRYIKDIQKDQLKISLWNGEVLLENVELNPEAFEYLQLPIALKQGRVGKLSIKI 71

Query: 103 PWKKLGWDPIIIILEDIYISASQRDDEEWSSDVVEKREFAGKKAKIAAAELAKLSRR--- 162
           PWKKL  DP+ I++ED++I ASQR+D+EWSSDVVEKREFAGKKAK+A+AELAKLSRR   
Sbjct: 72  PWKKLHRDPVTIMIEDVFICASQRNDQEWSSDVVEKREFAGKKAKLASAELAKLSRRVFD 131

Query: 163 --------------ILDNIQISIRNFHVMFHD 178
                         ILD++Q+SI+NFH+++ D
Sbjct: 132 NPGGNSYMSYITAKILDSVQVSIKNFHILYSD 163

BLAST of Cp4.1LG18g02450 vs. TAIR10
Match: AT4G17140.3 (AT4G17140.3 pleckstrin homology (PH) domain-containing protein)

HSP 1 Score: 90.1 bits (222), Expect = 1.7e-18
Identity = 53/159 (33.33%), Postives = 90/159 (56.60%), Query Frame = 1

Query: 35  MFERLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGR 94
           M E  V  LL  YLG YV+ + KE LKI+ W  ++ L+N++L  EA + L+LP  +K G 
Sbjct: 1   MLEDQVAYLLQRYLGNYVRGLNKEALKISVWQGDVELKNMQLKPEALNALKLPVRVKAGF 60

Query: 95  VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDD-EEWSSDVVEK------REFAGK--- 154
           +G + +K+PW +LG +P+++ L+ I++ A    D E  S D +++      RE   K   
Sbjct: 61  LGSVKLKVPWTRLGQEPVVVYLDRIFVLAEPATDVEGLSEDSIQEAKRNLIREMETKLVE 120

Query: 155 KAKIAAAELAK-----LSRRILDNIQISIRNFHVMFHDM 179
           +A+    E+ K     +   I+ N+++SI N H+ + D+
Sbjct: 121 RARRLQTEMNKSWMGSVINTIVGNLKLSISNIHIRYEDL 159

BLAST of Cp4.1LG18g02450 vs. TAIR10
Match: AT1G48090.1 (AT1G48090.1 calcium-dependent lipid-binding family protein)

HSP 1 Score: 82.4 bits (202), Expect = 3.5e-16
Identity = 40/117 (34.19%), Postives = 71/117 (60.68%), Query Frame = 1

Query: 43  LLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGRVGRLSIKI 102
           LL  YLG YV  +  E L+I+ W  +++L++++L  EA + L+LP A+K G VG +++K+
Sbjct: 28  LLRRYLGEYVHGLSTEALRISVWKGDVVLKDLKLKAEALNSLKLPVAVKSGFVGTITLKV 87

Query: 103 PWKKLGWDPIIIILEDIYISASQRDDEEWSSDVVEKREFAGKKAKIAAAELAKLSRR 160
           PWK LG +P+I++++ +++ A    D+    +   ++    K  +I  AE A L  R
Sbjct: 88  PWKSLGKEPVIVLIDRVFVLAYPAPDDRTLKEEDREKLLETKLQQIEEAETATLEAR 144

BLAST of Cp4.1LG18g02450 vs. NCBI nr
Match: gi|778664064|ref|XP_011660209.1| (PREDICTED: uncharacterized protein LOC101204937 isoform X1 [Cucumis sativus])

HSP 1 Score: 270.0 bits (689), Expect = 3.4e-69
Identity = 143/165 (86.67%), Postives = 144/165 (87.27%), Query Frame = 1

Query: 35  MFERLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGR 94
           MFE LVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALK+GR
Sbjct: 1   MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGR 60

Query: 95  VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWSSDVVEKREFAGKKAKIAAAELA 154
           VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDD EWSSD VEKREFAGKKAKIAAAELA
Sbjct: 61  VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGEWSSDAVEKREFAGKKAKIAAAELA 120

Query: 155 KLSRR-----------------ILDNIQISIRNFHVMFHDMTGDL 183
           KLSRR                 ILDNIQISIRNFHVMF DMTGDL
Sbjct: 121 KLSRRVCDNHAGQSFISYITAKILDNIQISIRNFHVMFLDMTGDL 165

BLAST of Cp4.1LG18g02450 vs. NCBI nr
Match: gi|659085896|ref|XP_008443663.1| (PREDICTED: putative vacuolar protein sorting-associated protein 13A [Cucumis melo])

HSP 1 Score: 270.0 bits (689), Expect = 3.4e-69
Identity = 143/165 (86.67%), Postives = 144/165 (87.27%), Query Frame = 1

Query: 35  MFERLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGR 94
           MFE LVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALK+GR
Sbjct: 1   MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGR 60

Query: 95  VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWSSDVVEKREFAGKKAKIAAAELA 154
           VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDD EWSSD VEKREFAGKKAKIAAAELA
Sbjct: 61  VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGEWSSDAVEKREFAGKKAKIAAAELA 120

Query: 155 KLSRR-----------------ILDNIQISIRNFHVMFHDMTGDL 183
           KLSRR                 ILDNIQISIRNFHVMF DMTGDL
Sbjct: 121 KLSRRVCDNHAGQSFISYITAKILDNIQISIRNFHVMFLDMTGDL 165

BLAST of Cp4.1LG18g02450 vs. NCBI nr
Match: gi|778664067|ref|XP_011660210.1| (PREDICTED: uncharacterized protein LOC101204937 isoform X2 [Cucumis sativus])

HSP 1 Score: 270.0 bits (689), Expect = 3.4e-69
Identity = 143/165 (86.67%), Postives = 144/165 (87.27%), Query Frame = 1

Query: 35  MFERLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGR 94
           MFE LVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALK+GR
Sbjct: 1   MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGR 60

Query: 95  VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWSSDVVEKREFAGKKAKIAAAELA 154
           VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDD EWSSD VEKREFAGKKAKIAAAELA
Sbjct: 61  VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGEWSSDAVEKREFAGKKAKIAAAELA 120

Query: 155 KLSRR-----------------ILDNIQISIRNFHVMFHDMTGDL 183
           KLSRR                 ILDNIQISIRNFHVMF DMTGDL
Sbjct: 121 KLSRRVCDNHAGQSFISYITAKILDNIQISIRNFHVMFLDMTGDL 165

BLAST of Cp4.1LG18g02450 vs. NCBI nr
Match: gi|703063989|ref|XP_010087090.1| (hypothetical protein L484_010462 [Morus notabilis])

HSP 1 Score: 240.4 bits (612), Expect = 2.9e-60
Identity = 119/164 (72.56%), Postives = 138/164 (84.15%), Query Frame = 1

Query: 35  MFERLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGR 94
           MFE  V QL++GYLGRYVKDIQ E+LKIT WNEE+LLENVEL LEAFDYLQLPFALKQGR
Sbjct: 1   MFEGFVRQLILGYLGRYVKDIQSEQLKITLWNEEVLLENVELTLEAFDYLQLPFALKQGR 60

Query: 95  VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWSSDVVEKREFAGKKAKIAAAELA 154
           VG+LSI+IPWKKLGWDPI+IILED+++ ASQRDDEEWSSDVVE+REFA KKAK+AAAELA
Sbjct: 61  VGKLSIRIPWKKLGWDPIVIILEDVFVCASQRDDEEWSSDVVERREFAAKKAKLAAAELA 120

Query: 155 KLSRR-----------------ILDNIQISIRNFHVMFHDMTGD 182
           KLS+R                 ILD+IQ+SIR+FHV++HD+ GD
Sbjct: 121 KLSKRVCDNRAGRSFTSYISAKILDSIQVSIRSFHVLYHDIRGD 164

BLAST of Cp4.1LG18g02450 vs. NCBI nr
Match: gi|296090219|emb|CBI40038.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 236.1 bits (601), Expect = 5.4e-59
Identity = 119/164 (72.56%), Postives = 134/164 (81.71%), Query Frame = 1

Query: 35  MFERLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKQGR 94
           MFE LV QLL+GYLGRY+KDIQKE+LKIT WNEE+LLENVELILEAFDYLQLPFALKQGR
Sbjct: 1   MFEGLVSQLLLGYLGRYIKDIQKEQLKITLWNEEVLLENVELILEAFDYLQLPFALKQGR 60

Query: 95  VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDEEWSSDVVEKREFAGKKAKIAAAELA 154
           VGRLSIKIPWKKLGWDPIIIILED++I A QRDD+EWS D +E+RE AGKKAK+AAAELA
Sbjct: 61  VGRLSIKIPWKKLGWDPIIIILEDVFICACQRDDQEWSLDAIERRELAGKKAKLAAAELA 120

Query: 155 KLSRR-----------------ILDNIQISIRNFHVMFHDMTGD 182
           KLS+R                 ILD IQ+SIRN HV++ D+  D
Sbjct: 121 KLSKRVCDNQAGKSFISYITAKILDGIQVSIRNVHVLYRDVQND 164

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
VP13F_DICDI3.5e-1839.00Putative vacuolar protein sorting-associated protein 13F OS=Dictyostelium discoi... [more]
VPS13_YEAST3.9e-1729.31Vacuolar protein sorting-associated protein 13 OS=Saccharomyces cerevisiae (stra... [more]
VP13B_DICDI2.5e-1627.54Putative vacuolar protein sorting-associated protein 13B OS=Dictyostelium discoi... [more]
VP13B_SCHPO4.0e-1430.86Vacuolar protein sorting-associated protein 13b OS=Schizosaccharomyces pombe (st... [more]
VP13A_DICDI2.6e-1328.82Putative vacuolar protein sorting-associated protein 13A OS=Dictyostelium discoi... [more]
Match NameE-valueIdentityDescription
W9QCF3_9ROSA2.0e-6072.56Uncharacterized protein OS=Morus notabilis GN=L484_010462 PE=4 SV=1[more]
A0A078DG18_BRANA7.1e-5868.86BnaA06g27210D protein OS=Brassica napus GN=BnaA06g27210D PE=4 SV=1[more]
A0A068VB32_COFCA7.1e-5872.05Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00019460001 PE=4 SV=1[more]
A0A087GCZ4_ARAAL1.6e-5773.13Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G423700 PE=4 SV=1[more]
V4T0K9_9ROSI2.1e-5771.95Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012577mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G24740.11.4e-5266.45 Protein of unknown function (DUF1162)[more]
AT4G17140.31.7e-1833.33 pleckstrin homology (PH) domain-containing protein[more]
AT1G48090.13.5e-1634.19 calcium-dependent lipid-binding family protein[more]
Match NameE-valueIdentityDescription
gi|778664064|ref|XP_011660209.1|3.4e-6986.67PREDICTED: uncharacterized protein LOC101204937 isoform X1 [Cucumis sativus][more]
gi|659085896|ref|XP_008443663.1|3.4e-6986.67PREDICTED: putative vacuolar protein sorting-associated protein 13A [Cucumis mel... [more]
gi|778664067|ref|XP_011660210.1|3.4e-6986.67PREDICTED: uncharacterized protein LOC101204937 isoform X2 [Cucumis sativus][more]
gi|703063989|ref|XP_010087090.1|2.9e-6072.56hypothetical protein L484_010462 [Morus notabilis][more]
gi|296090219|emb|CBI40038.3|5.4e-5972.56unnamed protein product [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR026854VPS13_N
IPR026847VPS13
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG18g02450.1Cp4.1LG18g02450.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026847Vacuolar protein sorting-associated protein 13PANTHERPTHR16166VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13coord: 36..177
score: 4.6
IPR026854Vacuolar protein sorting-associated protein 13, N-terminal domainPFAMPF12624Chorein_Ncoord: 36..149
score: 9.9
NoneNo IPR availablePANTHERPTHR16166:SF100SUBFAMILY NOT NAMEDcoord: 36..177
score: 4.6

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG18g02450Cucumber (Gy14) v2cgybcpeB039
Cp4.1LG18g02450Silver-seed gourdcarcpeB0757
Cp4.1LG18g02450Wax gourdcpewgoB0468
Cp4.1LG18g02450Wax gourdcpewgoB0473
Cp4.1LG18g02450Cucurbita pepo (Zucchini)cpecpeB006
Cp4.1LG18g02450Cucumber (Gy14) v1cgycpeB0928
Cp4.1LG18g02450Cucurbita maxima (Rimu)cmacpeB080
Cp4.1LG18g02450Cucurbita maxima (Rimu)cmacpeB126
Cp4.1LG18g02450Cucurbita moschata (Rifu)cmocpeB104