MELO3C010033 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C010033
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionVacuolar protein sorting-associated protein, putative
Locationchr2 : 11347673 .. 11355392 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAATTTGTGTCGTTGCGCTTGAAACCTCTAGAGAAGCCAAAGAGACGGACGAAATAAAATAGCGGCAAAATTGGCGAGAGAGATATAGAAAGAATGATTCGACGGAGCCGGCGAGATTGAGCCAGAGCTCGAGAGAGATTGAATGAATCGGTGAGAGCATGATTGATTGAGGACGAGATTCAGGGAGAGAAGTAGAGACGGTTCGTGTTCTTCAGTCAAATAATCCCAGACTAACCTGCTAAAAAACCCAACAATAATCAGATGAACTTAGACGGGGTTACTTGTTGTTGGTAGTGTTTTTAGGGAGAATATCGTGTGAGAATGTTTGAAGGACTCGTTGGACAGTTGCTTGTGGGTTATTTGGGCCGATATGTCAAGGATATTCAGAAGGAGAAGCTAAAGATTACATTCTGGAACGGTTTGTTCATCTGATTGTACTCTATGAACAATTTTAGCTTTGTTTGGATTGTCTTTTTATTTGTTGAACTAGTTAAGTAGCTTCGATGTTGTCATCGTCTCAAACTGATGCAAATACTTCCTTGTGCCCTCATATAATGATTATCGGACTGCGGTTCATCGCTATCTTGAATATGATCATTGGACAATTGGGTCGCCGCTTTTCTTTACATCGAACTAAGCCATAGCATAAACTGCCATGCCCGACGCTACTATTTCCCTTATACCACTCATCTTATATTTGGAAAATAAAGTCTTGTCTTAATATTTATTCATTAGGATTGGTCCTGCCTATCAAACAGCGAAAATTCTACATTCCTCTTCGTCAATTGATCTTCACGTCTAGTTTATTTTCATCACTCTTCCTCTGTAATTAAAGGATACCATGGTTGCTTCCTCTCACTTTCTTATTAGTAAGCGACTCTGGCGCCGTTTGGATAGAGCCTTCCAAAAGAACAAGTTCGACGGTGCTCAAACAGAAACTTCAAACCTTACTAACTTCTCTATATTTCTTCACAACTCTAAAATTTCTACTATTTCACTCCAGACAAGTACGCCGCAAAATAGCTTGAATATTTTGATCTTGTTGTTAGAAAGAGGGTCAAAGGATGGTTGATAGCTAAGTTCAAGAATCTGGTTTTTGGGTTCTTCAGAATTCAAGCTGTCCTAGTAGAAGTCGTTCTTCATTTGGGTTATGATCTGAGGGTCTTCTGGTGTTCCCTTTCCAAATTTTATTGCAGATTACTTGTTAGACGTTTAATCTGAAATGTTTTATCTTCTCTACTATTATTTGAAATCTCGGTCTAGTTTTGTTTTTCTCTTCTTGTACCGGCAAGCTTTTGGTAGCTTTATGTTTTGTATCATCTTGAGCATTAGTCTCATTACATTATTTTAATTTGAATAAAAAGTCATCTTTTAGTTTCATCAAAAAAAGAAGATAGGTGTATCTGTTTACATTGAGGATTCTTTTTGCTGGTAGACTTTTATAAACATTTGCAACTTTTCTTCCTATAAATGAAATTAACTTGATATGAAAAATTGCTCAAAATGGTTGCACATTCTATATTATATCTATTATTTTGAATTTTCTATATCAATCAGTCCTAAGAGGCACACTTACTACTTATGCAGAGGAAATTTTATTGGAGAATGTTGAGCTCATTCTAGAGGCCTTTGATTATCTTCAATTGCCATTCGCCCTAAAGGAAGGTATTTTTTAAATTCATAGGCAAAAATAGAAAAGCAGAATGTGTTTGGTATTGATATGAACATGTTTTGCTTTTTCTTTTCTTTTTCCATTCACTTATTAGGAATGTACAAGCTTTGCTTAATGGATTATTTTCTGCATTTTGTTATTAGCTTTTTTAATTCATCTTCCAATTAATTGGCTCAACTTAACATTGAGATATTGCAACCTTTTATTCCTCTTTTTTTGGTGCAATTACTTTTGCTTGATCAACATTTGTTTTCTCAGTATACTTAAGGTTTGAACCTATACTCTGAAATTCCATTTCACCTGCACCATAACCTCTAGGCCAACCACTATTAGCTTTGAAAATTTGTATTCAAAGTACAAATTTGTATTCTCTTAGAATCACATGACCACATTTCCTACTTTTGTGATTGTGCATATCATTTTGTTTTTACTCCTTGTGGAGTTTGTTTCTCTTGAACATTAGTCTCCTTTCATTATATGACTGAAAAAGGTTCGTTTCCTATTAAGAAATACATGTGATCAATCAAGAAAATAACATCAGAAGTTCTCTTTTATGGTTAACTACCTTTAATTTGCAGATACCAATTTGTTATTTTCGGCTATAGGTCCTATAGTGCTTAAGATTTTTTTGGATCTCATTCATATCTTTGGATTGCCATTGAGTCCCAACAAAAGTTATGTTAAGAATGAGTTGCAAGAGATGCTGGGAATTAGCTTAACGTTCAGGGCCTCACAAGATTATACTACTTACTATTTAGAACTCAAGGACACAAATGTACAACATATAGAACAGATCCTGTTCAAGAAAGTCGTAAGATCTTACTACTTACTCATGGCTACAAATTTGGAGTTTGACCAACAATTTATGTTGATCTTCCTTTGGGTGGCAAGCAAAGGAATTCACAATTGAGGAAGCCCATCTTTGAGAAAATCCATCATAAATTTTGTATTTGGAAAGAGACCTTCAACTCGAAAGGTCAAAGACATACACTCATCCTATTAACACTTTTCAAAAAGAAATGTGATTCAGGTTTTGACTCTCCTTTTAGTGTGAGCAGTGAAGAAGTTGATCATTTGGGGTAGCCAAATGGGTTGGAGGATCATTCTTTGAAGGACCCCTTTGAAATTGATCTCAATGATTTGTTTTAGAATGAAGAGGAATTGAATGTTGGAAAACAGACCTCTGAAAACCCTCTCTGTCTTAGCATTGCGAAATTCCAGCCCATTTAAAGCTGCTGGTAGATGAGTGCAAACAAGTTTTTGTTTGAGATCTGATTTTACTCACTTGTTTGGTTCAATAATCGGTTACAGTAGGAACTTGTGTGGTTTGAAGGTTGCAGATAAAGAGATTGAGATTCAAGTCTCTTGAAACACTTAATTCAGAACTAATACTCTCCCCTAGAATCAAAGAAGAAGCTGAGCTCAAGAAATGTTTCCTACCAGTTGAACAATTATTGCTTCTTAGCAGTTTTGTGGTTTCATCTTTGTGAAGATTCAGCTAGGCTGGTTGTTGTTCTCTTGGTGTTCCTTCTTCACTCATCTCAAAGCTTATTGTGGGCAAGATCTCAAAGTACAAGAGAATTATACAAAGAGAGCAATAAGGAAGTCGTAAGCAAGGGAAAGCAAGACAAAACTTCTTTATTGATTAGCTTGCTGTTATTGCTGAGTTTGATTTGGTTATTGTTTGTATTTGTTTTAGCCCCTTTTACTCTTTGTATAATTCTTTTGTACATTGAGCATTAGTCTCTCTTATTATTGAGGCTTGTCTTTGTTTTTTAAAAAAAAAAAAAAGAATATGCCAATTTATTAGTCTTGTTTCCTTTGAAAAAAATATGTCAATTTCTTACTTATCTTTTGTCAAAATGCCTTCAAAGGTCACTAAATCTATTGAAAAGCTTTTAAGAGACTTCCTATGGGAAGGCCCAAACCTTGAGGGTGGAGTCTACCATGCTAATTATAAGAAAACAAACCACCTAAATCCATGGGAAGTTTAGGAATTGGCAACCTAAATTAGGGGAATGATGCATTTTTTTGCTAAATGGACAAGGAGATTCCTTCGTACAACAAAGGCTCTTTGGTGCAAGGCAATTAAAACTAAATATGACTATACTACCAATGAGCAAGTTTGGCCTTCCCCTTCAAAGAAATGTAATGCTAAAGTGGTATCCTTTTCAAAAAAGAAAAAAAAAAAAGAAAAGGAAAAGTAAAAGGAAACATTCATGGAGGAGGAAGTCTCTATGGCGCCAAGTAGTCAAAAGCATTCACGGTAAAGAGCCTTTCAATTAGCATACTATCGGTAAATCTGGAAATAATCTAAAAAGTTCTTGAATAGGTATTTCTAGAGTATGGGGAAAGGTAGAAACTTTGTCCACCTTCAAGCTGGGAAACTCGAATTGCTTTTCAGAATGATGTGTGGGCTGACAATATCCCCCTTAGATCTCGTTTCCAAAAGCTGTTTAGAATCACGTTGCTGCCTAATGGATCAGTAGCTGCACATTGGGACCACTCCACCCTATCTTGGTCTATAATTTTTAGAAGACTCCTTAAAGAAGAGGAAATTTCAGAATTTCAACAACTGCTTCACCTCCTTTCGCAAAGACAGGTGGTAGATTCTACAGATAGAAGGATTTGGTCTCTAGAACCATCCGGTAAGTTTTCAGTCAAATCCCTCGTGAATCACTTTTCAGCATCTTCTTCGATGACTAGAGAGACCTCACGAAGTCTTGTGGAAATCCAACGAACCTAGAAGAGTCAACATCTTAGTTTGGATTATGCTATTTGGGTTACTAAATTGCTCTTTGGTCATGCAAAGAAAACTCCCAAACAGTTGTTTTCTGCCCTCTTTGCTTCCTTGGTGAAGAGGATTTGCAACATCTGTTCTTCTGTCCATATTCAGCTAAATGTTGGGGCAGTCTTCTCTCTTTATTTAAAGTAAGTTGGGTGTTTGACAGAACATTCAACTCAAACATGAGACAGATTATATTGGGCCCACTTTAGAAAAAGGGGCCACGACTTCTTTGGACTAACTTGTCCAAATCACTACTTGAAGAAATTTGGTTCAAATGAAATCAAAGGGTAATCGATGATAAGTTCATGGCTTGTTCTGATCGAATGGACATCGTATAAAGAAACATAGTCACTTGGTGCACTTTAAACAAGGAGTTTAGCCATACTCTATTCAAGATTTGTGTTCGAATTGGTCGCCTTTTACATGCTAAGATATCTGGATTTTTGTGTATCTATACTATGTATTACCCTGATGCTTCCTTATTATAATACAATTTTATATTCTACTAGTTTTTGTATGGACATGATGAAGACGCTAAGGGGGTGTCAACCTAGTTGAGATGTTTGGGTGTGTCTCCTAATCCCTAGGTCTCTTCATTTGTATTCTTAGTATATTTCTCTTGTACTTTGAGTTTATTTTGAAATAATAAAGAGACTTTCTCCAATTCTCCTTTTAAAAAAATGGGAACATTCATCTAAAGCCCTCTTGGGAGCCATATCAAGTGTAAATAGAACCATTGGCAGCCCATTTTCAACAAGAAAAAACAACTTTTTGATGGTTGATGAAAAAATAAGTTCAAGGAAACAACATCCCAATGGGAGGATATATGGAAACAACTAGCAAACAGAAAAACTAGGTGTTAAGGGGTTGTCAATCTAGTTGAGATGCCCGGGTGCACCTCCTGATCCCGTCTGCTTTTTGCTCTTTAAGCTTCTTTATTACACTCATTGTATATCTCTTTTGTACTTCGAGTTTCTATTATTAATAAAGAAGTTTCTCTCCGTTTAGAAAAAAACAAAAAAAACTATAAAAGAAAAACAAGACTTAAGCCAACAGATGGCAGATGTTTGATATGCCTGTATATGTTCTTTCATTTCTCTTAACGTGACCTTTTTAGAGGGCCATCTCTCTCCCTAGTTCCCTCAATGGAAATTCCTTCCAATATGATCCACCCCTTGCTCCCAACCGACTTCCTCTTTTTATAACTGAAAACCCTAACAAACTCTTTTAGCTAATTACTTAGATGCCCTTCCCCATGGACATACTATTAATCCTAATAGAACCTTAGCTAGGGGTCTCAGACAGTGTTGCAGCCTCATATATTTTCCAATATATTTTCCTTCTTGCTCTTCGCTTCTTTGCATTGTCCTTGTTGGTCTTTTATTTTCTTATATACTTTTTTGTTTCTTCAAGGTATTCTTCCCTTGTACTTTTTATATATTGTGTTCTTTATTTCTCTCCCATATTCAACTTATATCCCTGATTTTTTTTGAAGAGGAACCAAGTCTCAATATTATTAATGATTAAAATAAAAAGACAAAAGGTTATAGTATAAGAGGGTTATACAATGAGCAAAGAAAAGAGAAAGGTGGATTAGCAGATGCACCTAGGCATCTCAACTAGGTCAACACCCCCTTAGTACCCTCATCATGTCCATTGTGCGGAAAGAAATAAAAGTTATTCTTTCTCTTGGTTGATAGTAGCCAATACAAAAGCAAAACACAAGGCCAAAATAAAGTAGTCTGCCCATACCAAACATAAACCAAAACAACATTAGAGATACATTAGAAAAGCAGTCCTCGATTATGCTAGGATCCGGTTGAAGCAGAAGGCTATCCAAAATCATGCTGTCCAGGACTTCAAAGTGGGGGGGGGGGGTGGGGCTATAAAGGCTGGCCAGCAAAGTCTCCTGTTGAGAGTACTTCTGAAAAACTTTGGATAAGGAACACCATGATGTTGCATTCAGGCTAGCAGATTTAAAACGGTCCATCCATGTCGAAGGGTTGTCATGGAAAACCCTCTGGTTTCTTTCAAACCAAACTTCAACTAATAATGCTTTCACTGCATAATAAATGAGATTCATTTCCTTTTCAAAAGAACTAATACTGCATTAAACCACAGCAAGGGAGCTGTCTTCTTCTTCAAAGCTGGACCAGCAATGATTTGGACCACATTCAAGGAGTTGGTACCAGCAATTTGTTGCATAAACAGTCCAATAAAAGGTTCTAGATATCCTCCTGATTGTCTAGACAAAGGGGGGCAAATATGTGGTGACAGAGCATGGGAAAAATTTGTTGCATGGGCTTATATCCATGATCATTAGTCTCTTTTTTATTTTCAAAACGAAAAATTTCGATCTTGATAAAAAGAACAATAACTTCCATAACTAGTCATAATTTCTATCAATGAAAATTCTTCCATTGTTTTCTAGAAGAAGTCAAATCAGTGTACAAAACCAGTGTCTTTCAAATTGTTACTTCCCCACTCTTGTATGTTCAATAAAAACAATCTTTGAACTTTTTTACAGACTAAAAACTCAGCATTCCATGTTTGACATTTTTTTGGGTTAATTTTAATAGTTGTTCAAATAGAATGTTAAATTAACGATCTCAAGTTTCATTTTCTTTTTTCAATTTGGTAGGTCGTGTAGGGAGGTTAAGCATCAAGATTCCATGGAAAAAGCTTGGATGGGATCCAATCATTATTATTTTAGAGGATATATATATTTCTGCATCTCAGCGGGATGATGGTGAGGTAATTAACCAAAGTTGCAACCATTGATCCAAAGGGATGAGGCCCATACTTACTCAATAAACTTATGCCATATTGTGTTGGCTTCATGGTTATTTAGGGCTCTTGCTCGCACATATATGTAGAATTATCAAAACAACTCTGTTTTAGTGTATTTGTTTGGGTGATTTTGGCAGGAAAAAATAAGAAATTTCAATAATAATCAGAATCAACTTTGAGTTTTGCTTGTTTTGTTTCAAGTCCGAGCCTAAATTTCGTGTTTTCTTTTTTTCTTTCTTTTTTCTTAAAACAAGTTCATGTTTTGTTAAACTAACTTTTTTTAATTAATATTTTCCTGTATTTTACTATATCGGTCTGTCAAAACTCTTTTTGTGTTTTCTTTCTGAGGTTTCTTTTCTGAAGGACTCAATAACTTAATACTTACTTACAAATCCACTATTGAATTAATGTGGGGCCTTAAAAAAGGAGAATGGATTATTTTAAAATTACTATCCCCTTGCGGAATTTC

mRNA sequence

ATAATTTGTGTCGTTGCGCTTGAAACCTCTAGAGAAGCCAAAGAGACGGACGAAATAAAATAGCGGCAAAATTGGCGAGAGAGATATAGAAAGAATGATTCGACGGAGCCGGCGAGATTGAGCCAGAGCTCGAGAGAGATTGAATGAATCGGTGAGAGCATGATTGATTGAGGACGAGATTCAGGGAGAGAAGTAGAGACGGTTCGTGTTCTTCAGTCAAATAATCCCAGACTAACCTGCTAAAAAACCCAACAATAATCAGATGAACTTAGACGGGGTTACTTGTTGTTGGTAGTGTTTTTAGGGAGAATATCGTGTGAGAATGTTTGAAGGACTCGTTGGACAGTTGCTTGTGGGTTATTTGGGCCGATATGTCAAGGATATTCAGAAGGAGAAGCTAAAGATTACATTCTGGAACGAGGAAATTTTATTGGAGAATGTTGAGCTCATTCTAGAGGCCTTTGATTATCTTCAATTGCCATTCGCCCTAAAGGAAGGTCGTGTAGGGAGGTTAAGCATCAAGATTCCATGGAAAAAGCTTGGATGGGATCCAATCATTATTATTTTAGAGGATATATATATTTCTGCATCTCAGCGGGATGATGGTGAGGTAATTAACCAAAGTTGCAACCATTGATCCAAAGGGATGAGGCCCATACTTACTCAATAAACTTATGCCATATTGTGTTGGCTTCATGGTTATTTAGGGCTCTTGCTCGCACATATATGTAGAATTATCAAAACAACTCTGTTTTAGTGTATTTGTTTGGGTGATTTTGGCAGGAAAAAATAAGAAATTTCAATAATAATCAGAATCAACTTTGAGTTTTGCTTGTTTTGTTTCAAGTCCGAGCCTAAATTTCGTGTTTTCTTTTTTTCTTTCTTTTTTCTTAAAACAAGTTCATGTTTTGTTAAACTAACTTTTTTTAATTAATATTTTCCTGTATTTTACTATATCGGTCTGTCAAAACTCTTTTTGTGTTTTCTTTCTGAGGTTTCTTTTCTGAAGGACTCAATAACTTAATACTTACTTACAAATCCACTATTGAATTAATGTGGGGCCTTAAAAAAGGAGAATGGATTATTTTAAAATTACTATCCCCTTGCGGAATTTC

Coding sequence (CDS)

ATGTTTGAAGGACTCGTTGGACAGTTGCTTGTGGGTTATTTGGGCCGATATGTCAAGGATATTCAGAAGGAGAAGCTAAAGATTACATTCTGGAACGAGGAAATTTTATTGGAGAATGTTGAGCTCATTCTAGAGGCCTTTGATTATCTTCAATTGCCATTCGCCCTAAAGGAAGGTCGTGTAGGGAGGTTAAGCATCAAGATTCCATGGAAAAAGCTTGGATGGGATCCAATCATTATTATTTTAGAGGATATATATATTTCTGCATCTCAGCGGGATGATGGTGAGGTAATTAACCAAAGTTGCAACCATTGA

Protein sequence

MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGEVINQSCNH*
Homology
[Close]
BLAST of MELO3C010033 vs. Swiss-Prot
Match: VP13F_DICDI (Putative vacuolar protein sorting-associated protein 13F OS=Dictyostelium discoideum GN=vps13F PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 9.0e-18
Identity = 39/92 (42.39%), Postives = 60/92 (65.22%), Query Frame = 1 

Query: 1  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGR 60
          MFE +V  LL  YL  Y+K +  + L I+ W+  + LEN+EL   A +   LPF +KEG 
Sbjct: 1  MFESIVSNLLTRYLKEYIKALNTDNLNISIWSGNVSLENLELKSRALEKFNLPFTIKEGF 60

Query: 61 VGRLSIKIPWKKLGWDPIIIILEDIYISASQR 93
          +G+LS+KIPW  L  +P+I++++ +YI+AS +
Sbjct: 61 LGKLSLKIPWNNLKTEPVIVVIDQLYITASPK 92

[Close]
BLAST of MELO3C010033 vs. Swiss-Prot
Match: VP13D_DICDI (Putative vacuolar protein sorting-associated protein 13D OS=Dictyostelium discoideum GN=vps13D PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.3e-13
Identity = 36/101 (35.64%), Postives = 63/101 (62.38%), Query Frame = 1 

Query: 1   MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGR 60
           +FE +V +++  +LG +++++ K++LKI   N  ++L+N+E+  EAF    LP ++  G 
Sbjct: 2   VFESVVAEVIDRFLGSFLQEVGKKQLKIGVLNGNVVLKNIEVKPEAFKAFDLPLSIDRGI 61

Query: 61  VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGEVINQS 102
           VG+L+IK+PW  L  + +++ L+DIYI AS        N S
Sbjct: 62  VGKLTIKVPWTSLKSESVVVHLQDIYILASSSSTNVSSNYS 102

[Close]
BLAST of MELO3C010033 vs. Swiss-Prot
Match: VP13A_DICDI (Putative vacuolar protein sorting-associated protein 13A OS=Dictyostelium discoideum GN=vps13A PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 4.3e-12
Identity = 38/91 (41.76%), Postives = 57/91 (62.64%), Query Frame = 1 

Query: 1  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYL--QLPFALKE 60
          +FEGLV  +L   LG YVK++ K++LKI  +   + L+N+EL  +A   L   LP  +K+
Sbjct: 2  VFEGLVSDVLSRVLGEYVKNLNKDQLKIGIFGGSVQLQNLELKEDALANLPINLPITVKK 61

Query: 61 GRVGRLSIKIPWKKLGWDPIIIILEDIYISA 90
          G +G+L +K+PWK L   P+II ++ IY  A
Sbjct: 62 GFLGKLDLKVPWKDLKSKPVIINIDCIYALA 92

[Close]
BLAST of MELO3C010033 vs. Swiss-Prot
Match: VP13C_MOUSE (Vacuolar protein sorting-associated protein 13C OS=Mus musculus GN=Vps13c PE=1 SV=2)

HSP 1 Score: 71.6 bits (174), Expect = 5.7e-12
Identity = 30/87 (34.48%), Postives = 53/87 (60.92%), Query Frame = 1 

Query: 1  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGR 60
          + E +V  LL  +LG YV+++ K +LK+  W   + L+N+++   A   L +PF +K G+
Sbjct: 2  VLESVVADLLNRFLGDYVENLNKSQLKLGIWGGNVALDNLQIKENALSELDVPFKVKAGQ 61

Query: 61 VGRLSIKIPWKKLGWDPIIIILEDIYI 88
          + +L++KIPWK L  + ++  LE +Y+
Sbjct: 62 IDKLTLKIPWKNLYGEAVVATLEGLYL 88

[Close]
BLAST of MELO3C010033 vs. Swiss-Prot
Match: VP13C_HUMAN (Vacuolar protein sorting-associated protein 13C OS=Homo sapiens GN=VPS13C PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 5.7e-12
Identity = 30/87 (34.48%), Postives = 53/87 (60.92%), Query Frame = 1 

Query: 1  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGR 60
          + E +V  LL  +LG YV+++ K +LK+  W   + L+N+++   A   L +PF +K G+
Sbjct: 2  VLESVVADLLNRFLGDYVENLNKSQLKLGIWGGNVALDNLQIKENALSELDVPFKVKAGQ 61

Query: 61 VGRLSIKIPWKKLGWDPIIIILEDIYI 88
          + +L++KIPWK L  + ++  LE +Y+
Sbjct: 62 IDKLTLKIPWKNLYGEAVVATLEGLYL 88

[Close]
BLAST of MELO3C010033 vs. TrEMBL
Match: F6I5I5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0024g00090 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.4e-41
Identity = 84/96 (87.50%), Postives = 91/96 (94.79%), Query Frame = 1 

Query: 1  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGR 60
          MFEGLV QLL+GYLGRY+KDIQKE+LKIT WNEE+LLENVELILEAFDYLQLPFALK+GR
Sbjct: 1  MFEGLVSQLLLGYLGRYIKDIQKEQLKITLWNEEVLLENVELILEAFDYLQLPFALKQGR 60

Query: 61 VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE 97
          VGRLSIKIPWKKLGWDPIIIILED++I A QRDD E
Sbjct: 61 VGRLSIKIPWKKLGWDPIIIILEDVFICACQRDDQE 96

[Close]
BLAST of MELO3C010033 vs. TrEMBL
Match: A0A068VB32_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00019460001 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 3.4e-40
Identity = 80/96 (83.33%), Postives = 91/96 (94.79%), Query Frame = 1 

Query: 1  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGR 60
          MFEGLV QL++GYLGRY++DIQKE+LKIT WNEE+LLENVELILEAFDYLQLPFALK GR
Sbjct: 1  MFEGLVRQLILGYLGRYIRDIQKEQLKITLWNEEVLLENVELILEAFDYLQLPFALKHGR 60

Query: 61 VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE 97
          VG+LSIKIPWKKLGWDPIII+LED++ISA QR+D E
Sbjct: 61 VGKLSIKIPWKKLGWDPIIIVLEDVFISACQREDKE 96

[Close]
BLAST of MELO3C010033 vs. TrEMBL
Match: K4D8H8_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.7e-39
Identity = 80/96 (83.33%), Postives = 90/96 (93.75%), Query Frame = 1 

Query: 1  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGR 60
          MFEGLV QL++GYLG+Y+KDIQKEKLKIT WNEE+LLE+VELILEAFDYLQLPFALK+GR
Sbjct: 1  MFEGLVRQLILGYLGQYIKDIQKEKLKITLWNEEVLLEDVELILEAFDYLQLPFALKQGR 60

Query: 61 VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE 97
          VG+LSIKIPWKKLGWDP+II LED+ I ASQRDD E
Sbjct: 61 VGKLSIKIPWKKLGWDPVIISLEDVLICASQRDDKE 96

[Close]
BLAST of MELO3C010033 vs. TrEMBL
Match: A0A0V0J1W3_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.7e-39
Identity = 80/96 (83.33%), Postives = 90/96 (93.75%), Query Frame = 1 

Query: 1  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGR 60
          MFEGLV QL++GYLG+Y+KDIQKEKLKIT WNEE+LLE+VELILEAFDYLQLPFALK+GR
Sbjct: 1  MFEGLVRQLILGYLGQYIKDIQKEKLKITLWNEEVLLEDVELILEAFDYLQLPFALKQGR 60

Query: 61 VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE 97
          VG+LSIKIPWKKLGWDP+II LED+ I ASQRDD E
Sbjct: 61 VGKLSIKIPWKKLGWDPVIISLEDVLICASQRDDKE 96

[Close]
BLAST of MELO3C010033 vs. TrEMBL
Match: A0A022QJV8_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a018079mg PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.7e-39
Identity = 79/96 (82.29%), Postives = 90/96 (93.75%), Query Frame = 1 

Query: 1  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGR 60
          MFEGLV QL++GYLG+Y+KDIQKE+LKIT WNEE+LLENVELILEAFDYL+LPFA K+GR
Sbjct: 1  MFEGLVRQLILGYLGQYIKDIQKEQLKITLWNEEVLLENVELILEAFDYLRLPFAFKQGR 60

Query: 61 VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE 97
          VG+LSIKIPWKKLGWDPIIIILE++YI  SQRDD E
Sbjct: 61 VGKLSIKIPWKKLGWDPIIIILEEVYICVSQRDDTE 96

[Close]
BLAST of MELO3C010033 vs. TAIR10
Match: AT5G24740.1 (AT5G24740.1 Protein of unknown function (DUF1162))

HSP 1 Score: 136.0 bits (341), Expect = 1.4e-32
Identity = 67/99 (67.68%), Postives = 80/99 (80.81%), Query Frame = 1 

Query: 1  MFEGLVG---QLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALK 60
          M EG V     LL+GYLGRY+KDIQK++LKI+ WN E+LLENVEL  EAF+YLQLP ALK
Sbjct: 1  MLEGYVQGFVNLLLGYLGRYIKDIQKDQLKISLWNGEVLLENVELNPEAFEYLQLPIALK 60

Query: 61 EGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE 97
          +GRVG+LSIKIPWKKL  DP+ I++ED++I ASQR+D E
Sbjct: 61 QGRVGKLSIKIPWKKLHRDPVTIMIEDVFICASQRNDQE 99

[Close]
BLAST of MELO3C010033 vs. TAIR10
Match: AT4G17140.3 (AT4G17140.3 pleckstrin homology (PH) domain-containing protein)

HSP 1 Score: 83.2 bits (204), Expect = 1.1e-16
Identity = 38/100 (38.00%), Postives = 62/100 (62.00%), Query Frame = 1 

Query: 1   MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGR 60
           M E  V  LL  YLG YV+ + KE LKI+ W  ++ L+N++L  EA + L+LP  +K G 
Sbjct: 1   MLEDQVAYLLQRYLGNYVRGLNKEALKISVWQGDVELKNMQLKPEALNALKLPVRVKAGF 60

Query: 61  VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGEVINQ 101
           +G + +K+PW +LG +P+++ L+ I++ A    D E +++
Sbjct: 61  LGSVKLKVPWTRLGQEPVVVYLDRIFVLAEPATDVEGLSE 100

[Close]
BLAST of MELO3C010033 vs. TAIR10
Match: AT1G48090.1 (AT1G48090.1 calcium-dependent lipid-binding family protein)

HSP 1 Score: 80.1 bits (196), Expect = 9.0e-16
Identity = 35/97 (36.08%), Postives = 61/97 (62.89%), Query Frame = 1 

Query: 4   GLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGR 63
           G V  LL  YLG YV  +  E L+I+ W  +++L++++L  EA + L+LP A+K G VG 
Sbjct: 23  GEVLHLLRRYLGEYVHGLSTEALRISVWKGDVVLKDLKLKAEALNSLKLPVAVKSGFVGT 82

Query: 64  LSIKIPWKKLGWDPIIIILEDIYISASQRDDGEVINQ 101
           +++K+PWK LG +P+I++++ +++ A    D   + +
Sbjct: 83  ITLKVPWKSLGKEPVIVLIDRVFVLAYPAPDDRTLKE 119

[Close]
BLAST of MELO3C010033 vs. NCBI nr
Match: gi|778664064|ref|XP_011660209.1| (PREDICTED: uncharacterized protein LOC101204937 isoform X1 [Cucumis sativus])

HSP 1 Score: 194.9 bits (494), Expect = 7.1e-47
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 1 

Query: 1  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGR 60
          MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGR
Sbjct: 1  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGR 60

Query: 61 VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE 97
          VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE
Sbjct: 61 VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE 96

[Close]
BLAST of MELO3C010033 vs. NCBI nr
Match: gi|659085896|ref|XP_008443663.1| (PREDICTED: putative vacuolar protein sorting-associated protein 13A [Cucumis melo])

HSP 1 Score: 194.9 bits (494), Expect = 7.1e-47
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 1 

Query: 1  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGR 60
          MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGR
Sbjct: 1  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGR 60

Query: 61 VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE 97
          VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE
Sbjct: 61 VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE 96

[Close]
BLAST of MELO3C010033 vs. NCBI nr
Match: gi|778664067|ref|XP_011660210.1| (PREDICTED: uncharacterized protein LOC101204937 isoform X2 [Cucumis sativus])

HSP 1 Score: 194.9 bits (494), Expect = 7.1e-47
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 1 

Query: 1  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGR 60
          MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGR
Sbjct: 1  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGR 60

Query: 61 VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE 97
          VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE
Sbjct: 61 VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE 96

[Close]
BLAST of MELO3C010033 vs. NCBI nr
Match: gi|296090219|emb|CBI40038.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 176.8 bits (447), Expect = 2.0e-41
Identity = 84/96 (87.50%), Postives = 91/96 (94.79%), Query Frame = 1 

Query: 1  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGR 60
          MFEGLV QLL+GYLGRY+KDIQKE+LKIT WNEE+LLENVELILEAFDYLQLPFALK+GR
Sbjct: 1  MFEGLVSQLLLGYLGRYIKDIQKEQLKITLWNEEVLLENVELILEAFDYLQLPFALKQGR 60

Query: 61 VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE 97
          VGRLSIKIPWKKLGWDPIIIILED++I A QRDD E
Sbjct: 61 VGRLSIKIPWKKLGWDPIIIILEDVFICACQRDDQE 96

[Close]
BLAST of MELO3C010033 vs. NCBI nr
Match: gi|731419934|ref|XP_010661192.1| (PREDICTED: putative vacuolar protein sorting-associated protein 13A isoform X2 [Vitis vinifera])

HSP 1 Score: 176.8 bits (447), Expect = 2.0e-41
Identity = 84/96 (87.50%), Postives = 91/96 (94.79%), Query Frame = 1 

Query: 1  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGR 60
          MFEGLV QLL+GYLGRY+KDIQKE+LKIT WNEE+LLENVELILEAFDYLQLPFALK+GR
Sbjct: 1  MFEGLVSQLLLGYLGRYIKDIQKEQLKITLWNEEVLLENVELILEAFDYLQLPFALKQGR 60

Query: 61 VGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE 97
          VGRLSIKIPWKKLGWDPIIIILED++I A QRDD E
Sbjct: 61 VGRLSIKIPWKKLGWDPIIIILEDVFICACQRDDQE 96

The following BLAST results are available for this feature:
BLAST of MELO3C010033 vs. Swiss-Prot
Match NameE-valueIdentityDescription
VP13F_DICDI9.0e-1842.39Putative vacuolar protein sorting-associated protein 13F OS=Dictyostelium discoi... [more]
VP13D_DICDI1.3e-1335.64Putative vacuolar protein sorting-associated protein 13D OS=Dictyostelium discoi... [more]
VP13A_DICDI4.3e-1241.76Putative vacuolar protein sorting-associated protein 13A OS=Dictyostelium discoi... [more]
VP13C_MOUSE5.7e-1234.48Vacuolar protein sorting-associated protein 13C OS=Mus musculus GN=Vps13c PE=1 S... [more]
VP13C_HUMAN5.7e-1234.48Vacuolar protein sorting-associated protein 13C OS=Homo sapiens GN=VPS13C PE=1 S... [more]
BLAST of MELO3C010033 vs. TrEMBL
Match NameE-valueIdentityDescription
F6I5I5_VITVI1.4e-4187.50Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0024g00090 PE=4 SV=... [more]
A0A068VB32_COFCA3.4e-4083.33Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00019460001 PE=4 SV=1[more]
K4D8H8_SOLLC1.7e-3983.33Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
A0A0V0J1W3_SOLCH1.7e-3983.33Putative ovule protein OS=Solanum chacoense PE=4 SV=1[more]
A0A022QJV8_ERYGU1.7e-3982.29Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a018079mg PE=4 SV=1[more]
BLAST of MELO3C010033 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G24740.11.4e-3267.68 Protein of unknown function (DUF1162)[more]
AT4G17140.31.1e-1638.00 pleckstrin homology (PH) domain-containing protein[more]
AT1G48090.19.0e-1636.08 calcium-dependent lipid-binding family protein[more]
BLAST of MELO3C010033 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778664064|ref|XP_011660209.1|7.1e-47100.00PREDICTED: uncharacterized protein LOC101204937 isoform X1 [Cucumis sativus][more]
gi|659085896|ref|XP_008443663.1|7.1e-47100.00PREDICTED: putative vacuolar protein sorting-associated protein 13A [Cucumis mel... [more]
gi|778664067|ref|XP_011660210.1|7.1e-47100.00PREDICTED: uncharacterized protein LOC101204937 isoform X2 [Cucumis sativus][more]
gi|296090219|emb|CBI40038.3|2.0e-4187.50unnamed protein product [Vitis vinifera][more]
gi|731419934|ref|XP_010661192.1|2.0e-4187.50PREDICTED: putative vacuolar protein sorting-associated protein 13A isoform X2 [... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR026847VPS13
IPR026854VPS13_N
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C010033T1MELO3C010033T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026847Vacuolar protein sorting-associated protein 13PANTHERPTHR16166VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13coord: 2..101
score: 1.3
IPR026854Vacuolar protein sorting-associated protein 13, N-terminal domainPFAMPF12624Chorein_Ncoord: 2..97
score: 3.8
NoneNo IPR availablePANTHERPTHR16166:SF100SUBFAMILY NOT NAMEDcoord: 2..101
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C010033CSPI01G32120Wild cucumber (PI 183967)cpimeB044
MELO3C010033CmoCh10G008710Cucurbita moschata (Rifu)cmomeB061
MELO3C010033Lsi06G006820Bottle gourd (USVL1VR-Ls)lsimeB398
MELO3C010033Cp4.1LG18g02450Cucurbita pepo (Zucchini)cpemeB332
MELO3C010033Carg17804Silver-seed gourdcarmeB0946
MELO3C010033CsaV3_1G044340Cucumber (Chinese Long) v3cucmeB044
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C010033Cucurbita pepo (Zucchini)cpemeB007
MELO3C010033Cucumber (Gy14) v2cgybmeB040
MELO3C010033Silver-seed gourdcarmeB0540
MELO3C010033Watermelon (97103) v2mewmbB244
MELO3C010033Wax gourdmewgoB315
MELO3C010033Cucumber (Gy14) v1cgymeB574
MELO3C010033Cucurbita maxima (Rimu)cmameB069
MELO3C010033Cucurbita maxima (Rimu)cmameB107
MELO3C010033Cucurbita moschata (Rifu)cmomeB099
MELO3C010033Cucumber (Chinese Long) v2cumeB043
MELO3C010033Watermelon (Charleston Gray)mewcgB239
MELO3C010033Watermelon (97103) v1mewmB263