Cp4.1LG17g01300 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATTTAAACCTTACTTCAAACTTCAAATCAAGCAAACCAACCACTCTTTTTCTTCCTTCCCTTTTCACTTTTTGCTTTGTTTTCGAGGATTCGAGATGGAAACCGAAGTCGACGATGATGATTTGTTGTTTGCCGAGCTCACGAGGCGGATTTCGCTTCTCATTATGGACGACGACGAGTTTCCGAGCGTTCATACGGTTCGTTTCATCTCCCTTCACGAACAATTAGTCTTATATTTGTTTAATGTTTAAAATGCTTCCAGGGTTGGTTAATATGGTAATTGATCGACTTGTTACTTTGAAGTATTTTTAAATGGGTATGGTATCTATAGGCTCGATCTCCGGTGTTTAGTCGGGATATAAAGTACAAAGCTCAAATACCTTAAAAAAATTTAGGGACTAAACATGTCATTAAACATATTAATTATTAACGTTTTTGCAGGATTTGAGTCGGACAATTCACCGAGTCCGACCTGGGCAATTGCCATTAATGGTGGATTACGAGAATGGCTTTGCAAGGGAGAGCAAAGGTACTGGAGTTTTCATCCCGACACGGTTGCCATCACCAAAGAGGAAGCATAGAAATGTCGTGGGCTACAGAATCAAGTCGGAAAATAAGAGACTCAATTCTCAACCGTCCTCGACCTATTATTTTAAGCCCAAAAAGAGTTGAGCTTAGACATTTTCTTTATCGTTTCTAAATATTTCTAAGTTTTATTTGTGTATTAACATTTAATTATTTATTATATTAGTTCATGTGAGATAGTGATATGCTGGTTATGTCCCTTATGAAATAAAG TATTTAAACCTTACTTCAAACTTCAAATCAAGCAAACCAACCACTCTTTTTCTTCCTTCCCTTTTCACTTTTTGCTTTGTTTTCGAGGATTCGAGATGGAAACCGAAGTCGACGATGATGATTTGTTGTTTGCCGAGCTCACGAGGCGGATTTCGCTTCTCATTATGGACGACGACGAGTTTCCGAGCGTTCATACGGATTTGAGTCGGACAATTCACCGAGTCCGACCTGGGCAATTGCCATTAATGGTGGATTACGAGAATGGCTTTGCAAGGGAGAGCAAAGGTACTGGAGTTTTCATCCCGACACGGTTGCCATCACCAAAGAGGAAGCATAGAAATGTCGTGGGCTACAGAATCAAGTCGGAAAATAAGAGACTCAATTCTCAACCGTCCTCGACCTATTATTTTAAGCCCAAAAAGAGTTGAGCTTAGACATTTTCTTTATCGTTTCTAAATATTTCTAAGTTTTATTTGTGTATTAACATTTAATTATTTATTATATTAGTTCATGTGAGATAGTGATATGCTGGTTATGTCCCTTATGAAATAAAG ATGGAAACCGAAGTCGACGATGATGATTTGTTGTTTGCCGAGCTCACGAGGCGGATTTCGCTTCTCATTATGGACGACGACGAGTTTCCGAGCGTTCATACGGATTTGAGTCGGACAATTCACCGAGTCCGACCTGGGCAATTGCCATTAATGGTGGATTACGAGAATGGCTTTGCAAGGGAGAGCAAAGGTACTGGAGTTTTCATCCCGACACGGTTGCCATCACCAAAGAGGAAGCATAGAAATGTCGTGGGCTACAGAATCAAGTCGGAAAATAAGAGACTCAATTCTCAACCGTCCTCGACCTATTATTTTAAGCCCAAAAAGAGTTGA METEVDDDDLLFAELTRRISLLIMDDDEFPSVHTDLSRTIHRVRPGQLPLMVDYENGFARESKGTGVFIPTRLPSPKRKHRNVVGYRIKSENKRLNSQPSSTYYFKPKKS
BLAST of Cp4.1LG17g01300 vs. TrEMBL
Match: A0A0A0KGT1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G153490 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 5.2e-39 Identity = 83/109 (76.15%), Postives = 92/109 (84.40%), Query Frame = 1
BLAST of Cp4.1LG17g01300 vs. TrEMBL
Match: A0A103XMP0_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_004374 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 5.0e-10 Identity = 48/101 (47.52%), Postives = 64/101 (63.37%), Query Frame = 1
BLAST of Cp4.1LG17g01300 vs. TrEMBL
Match: M5XMB2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013511mg PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 4.3e-09 Identity = 55/117 (47.01%), Postives = 64/117 (54.70%), Query Frame = 1
BLAST of Cp4.1LG17g01300 vs. TrEMBL
Match: A0A0B2P2G9_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_004481 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 2.8e-08 Identity = 51/121 (42.15%), Postives = 68/121 (56.20%), Query Frame = 1
BLAST of Cp4.1LG17g01300 vs. TrEMBL
Match: I1MR77_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G015900 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 2.8e-08 Identity = 51/121 (42.15%), Postives = 68/121 (56.20%), Query Frame = 1
BLAST of Cp4.1LG17g01300 vs. TAIR10
Match: AT3G06070.1 (AT3G06070.1 unknown protein) HSP 1 Score: 51.6 bits (122), Expect = 3.6e-07 Identity = 35/90 (38.89%), Postives = 51/90 (56.67%), Query Frame = 1
BLAST of Cp4.1LG17g01300 vs. TAIR10
Match: AT5G19190.1 (AT5G19190.1 unknown protein) HSP 1 Score: 47.8 bits (112), Expect = 5.2e-06 Identity = 38/101 (37.62%), Postives = 53/101 (52.48%), Query Frame = 1
BLAST of Cp4.1LG17g01300 vs. NCBI nr
Match: gi|449463088|ref|XP_004149266.1| (PREDICTED: uncharacterized protein LOC101220151 [Cucumis sativus]) HSP 1 Score: 168.3 bits (425), Expect = 7.4e-39 Identity = 83/109 (76.15%), Postives = 92/109 (84.40%), Query Frame = 1
BLAST of Cp4.1LG17g01300 vs. NCBI nr
Match: gi|659117368|ref|XP_008458565.1| (PREDICTED: uncharacterized protein LOC103497931 [Cucumis melo]) HSP 1 Score: 160.2 bits (404), Expect = 2.0e-36 Identity = 81/108 (75.00%), Postives = 93/108 (86.11%), Query Frame = 1
BLAST of Cp4.1LG17g01300 vs. NCBI nr
Match: gi|694374710|ref|XP_009364198.1| (PREDICTED: uncharacterized protein LOC103954119 [Pyrus x bretschneideri]) HSP 1 Score: 73.2 bits (178), Expect = 3.3e-10 Identity = 53/116 (45.69%), Postives = 67/116 (57.76%), Query Frame = 1
BLAST of Cp4.1LG17g01300 vs. NCBI nr
Match: gi|976905995|gb|KVH93574.1| (hypothetical protein Ccrd_004374 [Cynara cardunculus var. scolymus]) HSP 1 Score: 72.0 bits (175), Expect = 7.2e-10 Identity = 48/101 (47.52%), Postives = 64/101 (63.37%), Query Frame = 1
BLAST of Cp4.1LG17g01300 vs. NCBI nr
Match: gi|657996933|ref|XP_008390842.1| (PREDICTED: uncharacterized protein LOC103453081 [Malus domestica]) HSP 1 Score: 71.2 bits (173), Expect = 1.2e-09 Identity = 53/116 (45.69%), Postives = 67/116 (57.76%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |