Cp4.1LG15g07060 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG15g07060
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionFasciclin-like arabinogalactan protein
LocationCp4.1LG15 : 7496461 .. 7496970 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAACATGATATCGAAATCTTACCACGGGTTTGTCATACTACTCAAGATCCTAAACAGCTCCCATAAAGACTGGCAAAATTCAGAGCTAACCTTCTTCATGCCCCCTGATCAGGAACTTTCTCAAGCTGCTATCTCCCCCGAACGAATACACGATTTCGTTCTAAACCATTCTATCCCCACTGCATTACTGCTCAACAATCTTCTACACTTCCCGAACGGCAGCCTGGTTCCATCAAGCATCCCGAATCGAATGATCAGGATAACCAACTGCAGAAAGATGAGCGTGTGTGTGAACGATGCACGAATCGTCACCCCAAACGTGTGCTTAAACTCATCCATAAGATGTCATGGTATAAGCACGACTATGACATATGACCGAACTTCCTTTTCAGACACTTCACCTGTGAAGCAGAGTTCGGCCGAAACTATAGCTCAGCGAAACGAAAAGAAAGCGGAAAAGTACTTACAGTCGACAGCAAAGAAGATGAACCGTCCCCTGCACTGA

mRNA sequence

ATGGACAACATGATATCGAAATCTTACCACGGGTTTGTCATACTACTCAAGATCCTAAACAGCTCCCATAAAGACTGGCAAAATTCAGAGCTAACCTTCTTCATGCCCCCTGATCAGGAACTTTCTCAAGCTGCTATCTCCCCCGAACGAATACACGATTTCGTTCTAAACCATTCTATCCCCACTGCATTACTGCTCAACAATCTTCTACACTTCCCGAACGGCAGCCTGGTTCCATCAAGCATCCCGAATCGAATGATCAGGATAACCAACTGCAGAAAGATGAGCGTGTGTGTGAACGATGCACGAATCGTCACCCCAAACGTGTGCTTAAACTCATCCATAAGATGTCATGGTATAAGCACGACTATGACATATGACCGAACTTCCTTTTCAGACACTTCACCTGTGAAGCAGAGTTCGGCCGAAACTATAGCTCAGCGAAACGAAAAGAAAGCGGAAAAGTACTTACAGTCGACAGCAAAGAAGATGAACCGTCCCCTGCACTGA

Coding sequence (CDS)

ATGGACAACATGATATCGAAATCTTACCACGGGTTTGTCATACTACTCAAGATCCTAAACAGCTCCCATAAAGACTGGCAAAATTCAGAGCTAACCTTCTTCATGCCCCCTGATCAGGAACTTTCTCAAGCTGCTATCTCCCCCGAACGAATACACGATTTCGTTCTAAACCATTCTATCCCCACTGCATTACTGCTCAACAATCTTCTACACTTCCCGAACGGCAGCCTGGTTCCATCAAGCATCCCGAATCGAATGATCAGGATAACCAACTGCAGAAAGATGAGCGTGTGTGTGAACGATGCACGAATCGTCACCCCAAACGTGTGCTTAAACTCATCCATAAGATGTCATGGTATAAGCACGACTATGACATATGACCGAACTTCCTTTTCAGACACTTCACCTGTGAAGCAGAGTTCGGCCGAAACTATAGCTCAGCGAAACGAAAAGAAAGCGGAAAAGTACTTACAGTCGACAGCAAAGAAGATGAACCGTCCCCTGCACTGA

Protein sequence

MDNMISKSYHGFVILLKILNSSHKDWQNSELTFFMPPDQELSQAAISPERIHDFVLNHSIPTALLLNNLLHFPNGSLVPSSIPNRMIRITNCRKMSVCVNDARIVTPNVCLNSSIRCHGISTTMTYDRTSFSDTSPVKQSSAETIAQRNEKKAEKYLQSTAKKMNRPLH
Homology
[Close]
BLAST of Cp4.1LG15g07060 vs. TrEMBL
Match: A0A0A0K7Q8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G272100 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 2.5e-64
Identity = 130/169 (76.92%), Postives = 143/169 (84.62%), Query Frame = 1 

Query: 1   MDNMISKSYHGFVILLKILNSSHKDWQNSELTFFMPPDQELSQAAISPERIHDFVLNHSI 60
           MD M  KSYHGF ILLKILNS+ K  QNS +TFFMP DQELSQA ISP+R+ +FVL+HSI
Sbjct: 29  MDEMRLKSYHGFAILLKILNSTTKTLQNSNITFFMPTDQELSQADISPDRLEEFVLSHSI 88

Query: 61  PTALLLNNLLHFPNGSLVPSSIPNRMIRITNCRKMSVCVNDARIVTPNVCLNSSIRCHGI 120
           PTALLLNNLLHFPNG+LVPSSIPNRMIRITNCRKM VC+N+ARI+TPNVCL SSIRCHGI
Sbjct: 89  PTALLLNNLLHFPNGTLVPSSIPNRMIRITNCRKMGVCLNNARIITPNVCLTSSIRCHGI 148

Query: 121 STTMTYDRTSFSDTSPVKQSSAETIAQRNEKKAEKYLQSTAKKMNRPLH 170
           ST ++YD+TSFSDT P KQSSAE I QRNE K  K LQS A K NR LH
Sbjct: 149 STAISYDKTSFSDTLPAKQSSAEIIVQRNEIKGAKSLQSGAMKKNRSLH 197

[Close]
BLAST of Cp4.1LG15g07060 vs. TrEMBL
Match: A0A0A0K6H7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G033340 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.8e-59
Identity = 124/169 (73.37%), Postives = 136/169 (80.47%), Query Frame = 1 

Query: 1   MDNMISKSYHGFVILLKILNSSHKDWQNSELTFFMPPDQELSQAAISPERIHDFVLNHSI 60
           MD M  KSYHGFVILLKILN+S+K  QNS++TFFMP DQELSQA IS +++ +FVL HSI
Sbjct: 29  MDEMRLKSYHGFVILLKILNNSNKTLQNSDITFFMPTDQELSQADISLDQLEEFVLRHSI 88

Query: 61  PTALLLNNLLHFPNGSLVPSSIPNRMIRITNCRKMSVCVNDARIVTPNVCLNSSIRCHGI 120
           PT LLLNNL HFPNGSLVPSSIPNRMI+IT  R M VCVNDA IVTPNVCL SSIRCHGI
Sbjct: 89  PTTLLLNNLSHFPNGSLVPSSIPNRMIKITKSRMMGVCVNDALIVTPNVCLTSSIRCHGI 148

Query: 121 STTMTYDRTSFSDTSPVKQSSAETIAQRNEKKAEKYLQSTAKKMNRPLH 170
           ST ++YD+ SFSDT P KQS AE I QRNEKK  K L ST  K NR LH
Sbjct: 149 STAISYDKNSFSDTLPAKQSLAEPIVQRNEKKGAKSLPSTTMKKNRSLH 197

[Close]
BLAST of Cp4.1LG15g07060 vs. TrEMBL
Match: K7M477_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G007200 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.9e-38
Identity = 89/167 (53.29%), Postives = 119/167 (71.26%), Query Frame = 1 

Query: 1   MDNMISKSYHGFVILLKILNSSHKDWQNSELTFFMPPDQELSQAAISPERIHDFVLNHSI 60
           M +M S+SY+GFVILLKILNS     QN++LTF MP D ELSQ +I+ +++HDF+L+HSI
Sbjct: 32  MTDMRSRSYYGFVILLKILNSQPNSLQNNDLTFLMPNDDELSQFSIALDQLHDFILSHSI 91

Query: 61  PTALLLNNLLHFPNGSLVPSSIPNRMIRITNCRKMSVCVNDARIVTPNVCLNSSIRCHGI 120
           PT L+L++LLHFPNGS+VPSS+P+R+I ITN  +  + VN+ARIVTPNVC +SSIRCHGI
Sbjct: 92  PTPLVLSHLLHFPNGSVVPSSVPSRVISITNGGRTGLFVNNARIVTPNVCQSSSIRCHGI 151

Query: 121 STTMTYDRTSFSDTSPVKQSSAETIAQRNEKKAEKYLQSTAKKMNRP 168
           S  +T+D    S  +P  +   +  +  N         ST +KMN P
Sbjct: 152 SAALTFDNMVPSHRAPKPKEDPKNSSVTNP-------SSTVEKMNIP 191

[Close]
BLAST of Cp4.1LG15g07060 vs. TrEMBL
Match: A0A151S043_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_030232 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 6.7e-38
Identity = 80/127 (62.99%), Postives = 104/127 (81.89%), Query Frame = 1 

Query: 1   MDNMISKSYHGFVILLKILNSSHKDWQNSELTFFMPPDQELSQAAISPERIHDFVLNHSI 60
           M +M S+SY GFVILLKILNS     QN++LTF MP D+ELS  +I+ +++HDF+L+HSI
Sbjct: 32  MTDMRSRSYFGFVILLKILNSQPNSLQNNDLTFLMPNDEELSHFSIALDQLHDFILSHSI 91

Query: 61  PTALLLNNLLHFPNGSLVPSSIPNRMIRITNCRKMSVCVNDARIVTPNVCLNSSIRCHGI 120
           PT LLL++LLHFPNGS+VPSS+P+R+I ITN  +  + VN+ARIVTPNVC +SSIRCHGI
Sbjct: 92  PTPLLLSHLLHFPNGSVVPSSVPSRVISITNSGRTGLFVNNARIVTPNVCQSSSIRCHGI 151

Query: 121 STTMTYD 128
           S  +T+D
Sbjct: 152 SAALTFD 158

[Close]
BLAST of Cp4.1LG15g07060 vs. TrEMBL
Match: G7KEP1_MEDTR (Fasciclin-like arabinogalactan protein OS=Medicago truncatula GN=MTR_5g097370 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 8.8e-38
Identity = 78/129 (60.47%), Postives = 104/129 (80.62%), Query Frame = 1 

Query: 1   MDNMISKSYHGFVILLKILNSSHKDWQNSELTFFMPPDQELSQAAISPERIHDFVLNHSI 60
           M +M S+SY+GFVILLKILNS     QN++LTF MP D++LS  +I+PE +HDF+L+HSI
Sbjct: 33  MSDMQSRSYYGFVILLKILNSLPNQMQNNDLTFLMPNDEDLSHFSIAPEELHDFLLSHSI 92

Query: 61  PTALLLNNLLHFPNGSLVPSSIPNRMIRITNCRKMSVCVNDARIVTPNVCLNSSIRCHGI 120
           PT LLLN+LLHFPNGS+VPS +P+++I ITN  +  + VN+ARIVTPNVC NS I+CHGI
Sbjct: 93  PTPLLLNHLLHFPNGSIVPSGLPSKVISITNNARAGLFVNNARIVTPNVCQNSLIKCHGI 152

Query: 121 STTMTYDRT 130
           S  +T++ +
Sbjct: 153 SAALTFENS 161

[Close]
BLAST of Cp4.1LG15g07060 vs. TAIR10
Match: AT5G26730.1 (AT5G26730.1 Fasciclin-like arabinogalactan family protein)

HSP 1 Score: 128.3 bits (321), Expect = 4.6e-30
Identity = 63/132 (47.73%), Postives = 93/132 (70.45%), Query Frame = 1 

Query: 1   MDNMISKSYHGFVILLKILNSSHKDWQNSELTFFMPPDQELSQAAISPERIHDFVLNHSI 60
           M +M  +SY+GFVILL+ LN ++  ++N+++TF MP D ++S A I+PE +  F+L H+I
Sbjct: 122 MTDMRRQSYNGFVILLRFLNDTNY-FRNTDITFLMPSDNDISHADITPESLETFILKHTI 181

Query: 61  PTALLLNNLLHFPNGSLVPSSIPNRMIRITNCRKMSVCVNDARIVTPNVCLNSSIRCHGI 120
           P  L++N++LHFPN +LVP S  +RM  IT      + VN+ARIVTPNVC NS I CHGI
Sbjct: 182 PAWLMINHMLHFPNRTLVPCSFSDRMFTITKSGGSGIYVNNARIVTPNVCQNSRISCHGI 241

Query: 121 STTMTYDRTSFS 133
           S  +++++   S
Sbjct: 242 SDVISFNQNYVS 252

[Close]
BLAST of Cp4.1LG15g07060 vs. TAIR10
Match: AT5G16920.1 (AT5G16920.1 Fasciclin-like arabinogalactan family protein)

HSP 1 Score: 84.3 bits (207), Expect = 7.6e-17
Identity = 49/138 (35.51%), Postives = 83/138 (60.14%), Query Frame = 1 

Query: 1   MDNMISKSYHGFVILLKILNSSHKDWQNSELTFFMPPDQELSQAAI--SPERIHDFVLNH 60
           ++ M   +Y  FV+L+ +L S +  +  + +TF MP D+ LS + I    + + +F+L H
Sbjct: 40  IEEMEKANYFSFVMLINMLPSVNPRFL-ANVTFLMPKDKTLSTSNIINQQDSVTEFLLRH 99

Query: 61  SIPTALLLNNLLHFPNGSLVPSSIPNRMIRITNCRKMSVCVNDARIVTPNVCLNSSIRCH 120
           SIP++LL  +L   PNGS+VPSS+P+  + I+N  + +  +N+ +I++ N+C   SI+CH
Sbjct: 100 SIPSSLLFEHLNLIPNGSIVPSSLPHYTLEISNGGRSNYFLNNVKIISRNICSLGSIKCH 159

Query: 121 GISTTMTYDRTSFSDTSP 137
           GI   +    T   D SP
Sbjct: 160 GIDGILQSPST-VDDDSP 175

[Close]
BLAST of Cp4.1LG15g07060 vs. NCBI nr
Match: gi|449463404|ref|XP_004149424.1| (PREDICTED: uncharacterized protein LOC101220860 [Cucumis sativus])

HSP 1 Score: 253.1 bits (645), Expect = 3.5e-64
Identity = 130/169 (76.92%), Postives = 143/169 (84.62%), Query Frame = 1 

Query: 1   MDNMISKSYHGFVILLKILNSSHKDWQNSELTFFMPPDQELSQAAISPERIHDFVLNHSI 60
           MD M  KSYHGF ILLKILNS+ K  QNS +TFFMP DQELSQA ISP+R+ +FVL+HSI
Sbjct: 29  MDEMRLKSYHGFAILLKILNSTTKTLQNSNITFFMPTDQELSQADISPDRLEEFVLSHSI 88

Query: 61  PTALLLNNLLHFPNGSLVPSSIPNRMIRITNCRKMSVCVNDARIVTPNVCLNSSIRCHGI 120
           PTALLLNNLLHFPNG+LVPSSIPNRMIRITNCRKM VC+N+ARI+TPNVCL SSIRCHGI
Sbjct: 89  PTALLLNNLLHFPNGTLVPSSIPNRMIRITNCRKMGVCLNNARIITPNVCLTSSIRCHGI 148

Query: 121 STTMTYDRTSFSDTSPVKQSSAETIAQRNEKKAEKYLQSTAKKMNRPLH 170
           ST ++YD+TSFSDT P KQSSAE I QRNE K  K LQS A K NR LH
Sbjct: 149 STAISYDKTSFSDTLPAKQSSAEIIVQRNEIKGAKSLQSGAMKKNRSLH 197

[Close]
BLAST of Cp4.1LG15g07060 vs. NCBI nr
Match: gi|659124022|ref|XP_008461951.1| (PREDICTED: uncharacterized protein LOC103500429 isoform X2 [Cucumis melo])

HSP 1 Score: 243.8 bits (621), Expect = 2.1e-61
Identity = 128/170 (75.29%), Postives = 140/170 (82.35%), Query Frame = 1 

Query: 1   MDNMISKSYHGFVILLKILNSSHKDWQNSELTFFMPPDQELSQAAISPERIHDFVLNHSI 60
           MD M  KSYHGF ILLKILNS+ K  QNS +TFFMP DQELSQA ISP R+ DFVL+HSI
Sbjct: 11  MDQMRLKSYHGFTILLKILNSTTKTLQNSNITFFMPTDQELSQADISPNRLKDFVLSHSI 70

Query: 61  PTALLLNNLLHFPNGSLVPSSIPNRMIRITNCRKMSVCVNDARIVTPNVCLNSSIRCHGI 120
           PTALLLNNLLHFPNGSLVPSSIPNRMIRITNCRKM VCVN+ARI+TPNVCL SSIRCHGI
Sbjct: 71  PTALLLNNLLHFPNGSLVPSSIPNRMIRITNCRKMGVCVNNARIITPNVCLTSSIRCHGI 130

Query: 121 STTMTYDRTS-FSDTSPVKQSSAETIAQRNEKKAEKYLQSTAKKMNRPLH 170
           S+ ++YD+TS FSDT P KQSSA+ I QRNE    K  +S A K NR LH
Sbjct: 131 SSAISYDKTSAFSDTLPAKQSSADIIVQRNEMNGAKSSESGAMKKNRSLH 180

[Close]
BLAST of Cp4.1LG15g07060 vs. NCBI nr
Match: gi|659124020|ref|XP_008461950.1| (PREDICTED: uncharacterized protein LOC103500429 isoform X1 [Cucumis melo])

HSP 1 Score: 243.8 bits (621), Expect = 2.1e-61
Identity = 128/170 (75.29%), Postives = 140/170 (82.35%), Query Frame = 1 

Query: 1   MDNMISKSYHGFVILLKILNSSHKDWQNSELTFFMPPDQELSQAAISPERIHDFVLNHSI 60
           MD M  KSYHGF ILLKILNS+ K  QNS +TFFMP DQELSQA ISP R+ DFVL+HSI
Sbjct: 29  MDQMRLKSYHGFTILLKILNSTTKTLQNSNITFFMPTDQELSQADISPNRLKDFVLSHSI 88

Query: 61  PTALLLNNLLHFPNGSLVPSSIPNRMIRITNCRKMSVCVNDARIVTPNVCLNSSIRCHGI 120
           PTALLLNNLLHFPNGSLVPSSIPNRMIRITNCRKM VCVN+ARI+TPNVCL SSIRCHGI
Sbjct: 89  PTALLLNNLLHFPNGSLVPSSIPNRMIRITNCRKMGVCVNNARIITPNVCLTSSIRCHGI 148

Query: 121 STTMTYDRTS-FSDTSPVKQSSAETIAQRNEKKAEKYLQSTAKKMNRPLH 170
           S+ ++YD+TS FSDT P KQSSA+ I QRNE    K  +S A K NR LH
Sbjct: 149 SSAISYDKTSAFSDTLPAKQSSADIIVQRNEMNGAKSSESGAMKKNRSLH 198

[Close]
BLAST of Cp4.1LG15g07060 vs. NCBI nr
Match: gi|659124299|ref|XP_008462085.1| (PREDICTED: uncharacterized protein LOC103500524 [Cucumis melo])

HSP 1 Score: 243.0 bits (619), Expect = 3.6e-61
Identity = 125/169 (73.96%), Postives = 142/169 (84.02%), Query Frame = 1 

Query: 1   MDNMISKSYHGFVILLKILNSSHKDWQNSELTFFMPPDQELSQAAISPERIHDFVLNHSI 60
           MD M  KSYHGFVILLKILN+S+K  QNS++TFFMP DQELSQA IS +++ +FVL+HSI
Sbjct: 29  MDEMRLKSYHGFVILLKILNNSNKTLQNSDITFFMPTDQELSQADISLDQLEEFVLSHSI 88

Query: 61  PTALLLNNLLHFPNGSLVPSSIPNRMIRITNCRKMSVCVNDARIVTPNVCLNSSIRCHGI 120
           PT+LLLNNLLHFPNGSLVPSSIPNRMI+IT  RKM VCVN+ARIVTPNVCL SSIRCHGI
Sbjct: 89  PTSLLLNNLLHFPNGSLVPSSIPNRMIKITKSRKMGVCVNEARIVTPNVCLTSSIRCHGI 148

Query: 121 STTMTYDRTSFSDTSPVKQSSAETIAQRNEKKAEKYLQSTAKKMNRPLH 170
           ST ++YD+TSFS+T P KQ+ AETI QRNEKK  K L S   K NR LH
Sbjct: 149 STAISYDKTSFSETLPAKQNLAETIVQRNEKKGAKSLPSATTKKNRSLH 197

[Close]
BLAST of Cp4.1LG15g07060 vs. NCBI nr
Match: gi|700188193|gb|KGN43426.1| (hypothetical protein Csa_7G033340 [Cucumis sativus])

HSP 1 Score: 236.9 bits (603), Expect = 2.6e-59
Identity = 124/169 (73.37%), Postives = 136/169 (80.47%), Query Frame = 1 

Query: 1   MDNMISKSYHGFVILLKILNSSHKDWQNSELTFFMPPDQELSQAAISPERIHDFVLNHSI 60
           MD M  KSYHGFVILLKILN+S+K  QNS++TFFMP DQELSQA IS +++ +FVL HSI
Sbjct: 29  MDEMRLKSYHGFVILLKILNNSNKTLQNSDITFFMPTDQELSQADISLDQLEEFVLRHSI 88

Query: 61  PTALLLNNLLHFPNGSLVPSSIPNRMIRITNCRKMSVCVNDARIVTPNVCLNSSIRCHGI 120
           PT LLLNNL HFPNGSLVPSSIPNRMI+IT  R M VCVNDA IVTPNVCL SSIRCHGI
Sbjct: 89  PTTLLLNNLSHFPNGSLVPSSIPNRMIKITKSRMMGVCVNDALIVTPNVCLTSSIRCHGI 148

Query: 121 STTMTYDRTSFSDTSPVKQSSAETIAQRNEKKAEKYLQSTAKKMNRPLH 170
           ST ++YD+ SFSDT P KQS AE I QRNEKK  K L ST  K NR LH
Sbjct: 149 STAISYDKNSFSDTLPAKQSLAEPIVQRNEKKGAKSLPSTTMKKNRSLH 197

The following BLAST results are available for this feature:
BLAST of Cp4.1LG15g07060 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG15g07060 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7Q8_CUCSA2.5e-6476.92Uncharacterized protein OS=Cucumis sativus GN=Csa_7G272100 PE=4 SV=1[more]
A0A0A0K6H7_CUCSA1.8e-5973.37Uncharacterized protein OS=Cucumis sativus GN=Csa_7G033340 PE=4 SV=1[more]
K7M477_SOYBN3.9e-3853.29Uncharacterized protein OS=Glycine max GN=GLYMA_14G007200 PE=4 SV=1[more]
A0A151S043_CAJCA6.7e-3862.99Uncharacterized protein OS=Cajanus cajan GN=KK1_030232 PE=4 SV=1[more]
G7KEP1_MEDTR8.8e-3860.47Fasciclin-like arabinogalactan protein OS=Medicago truncatula GN=MTR_5g097370 PE... [more]
BLAST of Cp4.1LG15g07060 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G26730.14.6e-3047.73 Fasciclin-like arabinogalactan family protein[more]
AT5G16920.17.6e-1735.51 Fasciclin-like arabinogalactan family protein[more]
BLAST of Cp4.1LG15g07060 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449463404|ref|XP_004149424.1|3.5e-6476.92PREDICTED: uncharacterized protein LOC101220860 [Cucumis sativus][more]
gi|659124022|ref|XP_008461951.1|2.1e-6175.29PREDICTED: uncharacterized protein LOC103500429 isoform X2 [Cucumis melo][more]
gi|659124020|ref|XP_008461950.1|2.1e-6175.29PREDICTED: uncharacterized protein LOC103500429 isoform X1 [Cucumis melo][more]
gi|659124299|ref|XP_008462085.1|3.6e-6173.96PREDICTED: uncharacterized protein LOC103500524 [Cucumis melo][more]
gi|700188193|gb|KGN43426.1|2.6e-5973.37hypothetical protein Csa_7G033340 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000782FAS1_domain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g07060.1Cp4.1LG15g07060.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000782FAS1 domainGENE3DG3DSA:2.30.180.10coord: 28..122
score: 1.
IPR000782FAS1 domainunknownSSF82153FAS1 domaincoord: 25..121
score: 7.8
NoneNo IPR availablePANTHERPTHR36069FAMILY NOT NAMEDcoord: 1..149
score: 1.7
NoneNo IPR availablePANTHERPTHR36069:SF2FASCICLIN-LIKE ARABINOGALACTAN FAMILY PROTEINcoord: 1..149
score: 1.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG15g07060CmoCh11G018350Cucurbita moschata (Rifu)cmocpeB093
Cp4.1LG15g07060CmoCh19G008850Cucurbita moschata (Rifu)cmocpeB481
Cp4.1LG15g07060Cla015675Watermelon (97103) v1cpewmB268
Cp4.1LG15g07060Csa7G033340Cucumber (Chinese Long) v2cpecuB257
Cp4.1LG15g07060ClCG02G002710Watermelon (Charleston Gray)cpewcgB233
Cp4.1LG15g07060CSPI07G02820Wild cucumber (PI 183967)cpecpiB257
Cp4.1LG15g07060Lsi11G013590Bottle gourd (USVL1VR-Ls)cpelsiB199
Cp4.1LG15g07060MELO3C028604.2Melon (DHL92) v3.6.1cpemedB261
Cp4.1LG15g07060CsaV3_7G002660Cucumber (Chinese Long) v3cpecucB0322
Cp4.1LG15g07060Bhi05G001278Wax gourdcpewgoB0326
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG15g07060Cucumber (Chinese Long) v3cpecucB0316
Cp4.1LG15g07060Wax gourdcpewgoB0336
Cp4.1LG15g07060Cucurbita pepo (Zucchini)cpecpeB255
Cp4.1LG15g07060Cucurbita pepo (Zucchini)cpecpeB267
Cp4.1LG15g07060Cucumber (Gy14) v1cgycpeB0206
Cp4.1LG15g07060Cucumber (Gy14) v1cgycpeB0287
Cp4.1LG15g07060Cucurbita maxima (Rimu)cmacpeB118
Cp4.1LG15g07060Cucurbita maxima (Rimu)cmacpeB522
Cp4.1LG15g07060Cucurbita maxima (Rimu)cmacpeB560
Cp4.1LG15g07060Wild cucumber (PI 183967)cpecpiB251
Cp4.1LG15g07060Bottle gourd (USVL1VR-Ls)cpelsiB194
Cp4.1LG15g07060Melon (DHL92) v3.5.1cpemeB223
Cp4.1LG15g07060Cucumber (Gy14) v2cgybcpeB751
Cp4.1LG15g07060Cucumber (Gy14) v2cgybcpeB910
Cp4.1LG15g07060Silver-seed gourdcarcpeB0281
Cp4.1LG15g07060Silver-seed gourdcarcpeB0484
Cp4.1LG15g07060Silver-seed gourdcarcpeB1481