CmoCh19G008850 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G008850
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Fasciclin-like arabinogalactan protein
Location	Cmo_Chr19 : 8427010 .. 8427606 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCTCCCTGGTTTTTCGTTCTTCTCTTCTTCGTCGGAAAAGCTCAGGCCACACCGATCGACCAACCCGACCTGCAAGCAGCCATGGATGACATGATATCGAAATCTTACCACGGGTTTGTCATACTACTCAAGATCCTAAACAGCTCCCATAAAGACTGGCAAAATTCGGAGCTAACCTTCTTCATGCCCCCTGATCAGGAACTTTCTCGAGCTGCTATCTCCCCCGAACGAATACACGATTTCGTTTTAAGCCATTCTATCCCCACTGCATTACTGCTCAACAATCTTCTACACTTCCCAAACGGCAGCCTGGTTCCATCAAGCATCCCGAATCGAATGATCAGGATAACCAACTGCAGAAAGATGAGCGTGTGCGTGAACAATGCACGAATCGTCACCCCAAACGTGTGCTTAAACTCATCCATAAGATGTCATGGTATAAGCACGACTATGACATATGACCGAACTTCCTTTTCAGACACTTACCTGCGAAGCAGAGTTCGGCCGAAACTATATCTCAAGCGAAACGAAAAGAAAGCGGAAAAATACTTACAGTCTGCAGCAAAGAAGATGAACCGTCCCCTGCACTGA

mRNA sequence

ATGGCTGCTCCCTGGTTTTTCGTTCTTCTCTTCTTCGTCGGAAAAGCTCAGGCCACACCGATCGACCAACCCGACCTGCAAGCAGCCATGGATGACATGATATCGAAATCTTACCACGGGTTTGTCATACTACTCAAGATCCTAAACAGCTCCCATAAAGACTGGCAAAATTCGGAGCTAACCTTCTTCATGCCCCCTGATCAGGAACTTTCTCGAGCTGCTATCTCCCCCGAACGAATACACGATTTCGTTTTAAGCCATTCTATCCCCACTGCATTACTGCTCAACAATCTTCTACACTTCCCAAACGGCAGCCTGGTTCCATCAAGCATCCCGAATCGAATGATCAGGATAACCAACTGCAGAAAGATGAGCGTGTGCGTGAACAATGCACGAATCGTCACCCCAAACGTGTGCTTAAACTCATCCATAAGATGTCATGGTATAAGCACGACTATGACATATGACCGAACTTCCTTTTCAGACACTTACCTGCGAAGCAGAGTTCGGCCGAAACTATATCTCAAGCGAAACGAAAAGAAAGCGGAAAAATACTTACAGTCTGCAGCAAAGAAGATGAACCGTCCCCTGCACTGA

Coding sequence (CDS)

ATGGCTGCTCCCTGGTTTTTCGTTCTTCTCTTCTTCGTCGGAAAAGCTCAGGCCACACCGATCGACCAACCCGACCTGCAAGCAGCCATGGATGACATGATATCGAAATCTTACCACGGGTTTGTCATACTACTCAAGATCCTAAACAGCTCCCATAAAGACTGGCAAAATTCGGAGCTAACCTTCTTCATGCCCCCTGATCAGGAACTTTCTCGAGCTGCTATCTCCCCCGAACGAATACACGATTTCGTTTTAAGCCATTCTATCCCCACTGCATTACTGCTCAACAATCTTCTACACTTCCCAAACGGCAGCCTGGTTCCATCAAGCATCCCGAATCGAATGATCAGGATAACCAACTGCAGAAAGATGAGCGTGTGCGTGAACAATGCACGAATCGTCACCCCAAACGTGTGCTTAAACTCATCCATAAGATGTCATGGTATAAGCACGACTATGACATATGACCGAACTTCCTTTTCAGACACTTACCTGCGAAGCAGAGTTCGGCCGAAACTATATCTCAAGCGAAACGAAAAGAAAGCGGAAAAATACTTACAGTCTGCAGCAAAGAAGATGAACCGTCCCCTGCACTGA

Homology

[Close]

BLAST of CmoCh19G008850 vs. TrEMBL
Match: A0A0A0K7Q8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G272100 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 4.9e-72
Identity = 142/196 (72.45%), Postives = 161/196 (82.14%), Query Frame = 1


Query: 3   APWFFVLLFFVGKAQATPIDQPDLQAAMDDMISKSYHGFVILLKILNSSHKDWQNSELTF 62
           APWFFVLLF V KA AT  +Q DLQAAMD+M  KSYHGF ILLKILNS+ K  QNS +TF
Sbjct: 2   APWFFVLLFLVAKAHATMTNQIDLQAAMDEMRLKSYHGFAILLKILNSTTKTLQNSNITF 61

Query: 63  FMPPDQELSRAAISPERIHDFVLSHSIPTALLLNNLLHFPNGSLVPSSIPNRMIRITNCR 122
           FMP DQELS+A ISP+R+ +FVLSHSIPTALLLNNLLHFPNG+LVPSSIPNRMIRITNCR
Sbjct: 62  FMPTDQELSQADISPDRLEEFVLSHSIPTALLLNNLLHFPNGTLVPSSIPNRMIRITNCR 121

Query: 123 KMSVCVNNARIVTPNVCLNSSIRCHGISTTMTYDRTSFSDTYLRSRVRPKLYLKRNEKKA 182
           KM VC+NNARI+TPNVCL SSIRCHGIST ++YD+TSFSDT    +   ++ ++RNE K 
Sbjct: 122 KMGVCLNNARIITPNVCLTSSIRCHGISTAISYDKTSFSDTLPAKQSSAEIIVQRNEIKG 181

Query: 183 EKYLQSAAKKMNRPLH 199
            K LQS A K NR LH
Sbjct: 182 AKSLQSGAMKKNRSLH 197

[Close]

BLAST of CmoCh19G008850 vs. TrEMBL
Match: A0A0A0K6H7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G033340 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 4.4e-65
Identity = 133/195 (68.21%), Postives = 153/195 (78.46%), Query Frame = 1


Query: 4   PWFFVLLFFVGKAQATPIDQPDLQAAMDDMISKSYHGFVILLKILNSSHKDWQNSELTFF 63
           PWFFVLLF V KAQAT  +Q DLQAAMD+M  KSYHGFVILLKILN+S+K  QNS++TFF
Sbjct: 3   PWFFVLLFLVAKAQATMTNQTDLQAAMDEMRLKSYHGFVILLKILNNSNKTLQNSDITFF 62

Query: 64  MPPDQELSRAAISPERIHDFVLSHSIPTALLLNNLLHFPNGSLVPSSIPNRMIRITNCRK 123
           MP DQELS+A IS +++ +FVL HSIPT LLLNNL HFPNGSLVPSSIPNRMI+IT  R 
Sbjct: 63  MPTDQELSQADISLDQLEEFVLRHSIPTTLLLNNLSHFPNGSLVPSSIPNRMIKITKSRM 122

Query: 124 MSVCVNNARIVTPNVCLNSSIRCHGISTTMTYDRTSFSDTYLRSRVRPKLYLKRNEKKAE 183
           M VCVN+A IVTPNVCL SSIRCHGIST ++YD+ SFSDT    +   +  ++RNEKK  
Sbjct: 123 MGVCVNDALIVTPNVCLTSSIRCHGISTAISYDKNSFSDTLPAKQSLAEPIVQRNEKKGA 182

Query: 184 KYLQSAAKKMNRPLH 199
           K L S   K NR LH
Sbjct: 183 KSLPSTTMKKNRSLH 197

[Close]

BLAST of CmoCh19G008850 vs. TrEMBL
Match: A0A151S043_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_030232 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 3.5e-46
Identity = 99/157 (63.06%), Postives = 125/157 (79.62%), Query Frame = 1


Query: 3   APWFFVLL--FFVGKAQATP-IDQPDLQAAMDDMISKSYHGFVILLKILNSSHKDWQNSE 62
           A WF VLL  F +G++Q+T   +Q DLQAAM DM S+SY GFVILLKILNS     QN++
Sbjct: 2   ALWFMVLLALFAIGESQSTTSFNQTDLQAAMTDMRSRSYFGFVILLKILNSQPNSLQNND 61

Query: 63  LTFFMPPDQELSRAAISPERIHDFVLSHSIPTALLLNNLLHFPNGSLVPSSIPNRMIRIT 122
           LTF MP D+ELS  +I+ +++HDF+LSHSIPT LLL++LLHFPNGS+VPSS+P+R+I IT
Sbjct: 62  LTFLMPNDEELSHFSIALDQLHDFILSHSIPTPLLLSHLLHFPNGSVVPSSVPSRVISIT 121

Query: 123 NCRKMSVCVNNARIVTPNVCLNSSIRCHGISTTMTYD 157
           N  +  + VNNARIVTPNVC +SSIRCHGIS  +T+D
Sbjct: 122 NSGRTGLFVNNARIVTPNVCQSSSIRCHGISAALTFD 158

[Close]

BLAST of CmoCh19G008850 vs. TrEMBL
Match: K7M477_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G007200 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 5.1e-45
Identity = 106/197 (53.81%), Postives = 138/197 (70.05%), Query Frame = 1


Query: 3   APWFFVLLFF--VGKAQAT-PIDQPDLQAAMDDMISKSYHGFVILLKILNSSHKDWQNSE 62
           A WF +LL F  +G++Q+T   +Q DLQAAM DM S+SY+GFVILLKILNS     QN++
Sbjct: 2   AIWFVILLTFFAIGESQSTMSFNQTDLQAAMTDMRSRSYYGFVILLKILNSQPNSLQNND 61

Query: 63  LTFFMPPDQELSRAAISPERIHDFVLSHSIPTALLLNNLLHFPNGSLVPSSIPNRMIRIT 122
           LTF MP D ELS+ +I+ +++HDF+LSHSIPT L+L++LLHFPNGS+VPSS+P+R+I IT
Sbjct: 62  LTFLMPNDDELSQFSIALDQLHDFILSHSIPTPLVLSHLLHFPNGSVVPSSVPSRVISIT 121

Query: 123 NCRKMSVCVNNARIVTPNVCLNSSIRCHGISTTMTYDRTSFSDTYLRSRVRPKLYLKRNE 182
           N  +  + VNNARIVTPNVC +SSIRCHGIS  +T+D    S    + +  PK     N 
Sbjct: 122 NGGRTGLFVNNARIVTPNVCQSSSIRCHGISAALTFDNMVPSHRAPKPKEDPKNSSVTNP 181

Query: 183 KKAEKYLQSAAKKMNRP 197
                   S  +KMN P
Sbjct: 182 -------SSTVEKMNIP 191

[Close]

BLAST of CmoCh19G008850 vs. TrEMBL
Match: G7KEP1_MEDTR (Fasciclin-like arabinogalactan protein OS=Medicago truncatula GN=MTR_5g097370 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.5e-44
Identity = 94/160 (58.75%), Postives = 123/160 (76.88%), Query Frame = 1


Query: 3   APWFFVLLFF--VGKAQATP--IDQPDLQAAMDDMISKSYHGFVILLKILNSSHKDWQNS 62
           A WF ++L    VG++Q+T    +Q DLQ AM DM S+SY+GFVILLKILNS     QN+
Sbjct: 2   ALWFVLILTLLAVGESQSTTAAFNQTDLQTAMSDMQSRSYYGFVILLKILNSLPNQMQNN 61

Query: 63  ELTFFMPPDQELSRAAISPERIHDFVLSHSIPTALLLNNLLHFPNGSLVPSSIPNRMIRI 122
           +LTF MP D++LS  +I+PE +HDF+LSHSIPT LLLN+LLHFPNGS+VPS +P+++I I
Sbjct: 62  DLTFLMPNDEDLSHFSIAPEELHDFLLSHSIPTPLLLNHLLHFPNGSIVPSGLPSKVISI 121

Query: 123 TNCRKMSVCVNNARIVTPNVCLNSSIRCHGISTTMTYDRT 159
           TN  +  + VNNARIVTPNVC NS I+CHGIS  +T++ +
Sbjct: 122 TNNARAGLFVNNARIVTPNVCQNSLIKCHGISAALTFENS 161

[Close]

BLAST of CmoCh19G008850 vs. TAIR10
Match: AT5G26730.1 (AT5G26730.1 Fasciclin-like arabinogalactan family protein)

HSP 1 Score: 142.5 bits (358), Expect = 2.8e-34
Identity = 73/152 (48.03%), Postives = 104/152 (68.42%), Query Frame = 1


Query: 22  DQPDLQAAMDDMISKSYHGFVILLKILNSSHKDWQNSELTFFMPPDQELSRAAISPERIH 81
           +Q DL +AM DM  +SY+GFVILL+ LN ++  ++N+++TF MP D ++S A I+PE + 
Sbjct: 114 NQTDLISAMTDMRRQSYNGFVILLRFLNDTNY-FRNTDITFLMPSDNDISHADITPESLE 173

Query: 82  DFVLSHSIPTALLLNNLLHFPNGSLVPSSIPNRMIRITNCRKMSVCVNNARIVTPNVCLN 141
            F+L H+IP  L++N++LHFPN +LVP S  +RM  IT      + VNNARIVTPNVC N
Sbjct: 174 TFILKHTIPAWLMINHMLHFPNRTLVPCSFSDRMFTITKSGGSGIYVNNARIVTPNVCQN 233

Query: 142 SSIRCHGISTTMTYDRTSFSDTYLRSRVRPKL 174
           S I CHGIS     D  SF+  Y+ +++ P +
Sbjct: 234 SRISCHGIS-----DVISFNQNYVSTKMLPSV 259

[Close]

BLAST of CmoCh19G008850 vs. TAIR10
Match: AT5G16920.1 (AT5G16920.1 Fasciclin-like arabinogalactan family protein)

HSP 1 Score: 92.4 bits (228), Expect = 3.3e-19
Identity = 54/161 (33.54%), Postives = 94/161 (58.39%), Query Frame = 1


Query: 15  KAQATPI--DQPDLQAAMDDMISKSYHGFVILLKILNSSHKDWQNSELTFFMPPDQELSR 74
           +AQ +P   +  +L  A+++M   +Y  FV+L+ +L S +  +  + +TF MP D+ LS 
Sbjct: 23  RAQKSPHVPNNHELSIAIEEMEKANYFSFVMLINMLPSVNPRFL-ANVTFLMPKDKTLST 82

Query: 75  AAI--SPERIHDFVLSHSIPTALLLNNLLHFPNGSLVPSSIPNRMIRITNCRKMSVCVNN 134
           + I    + + +F+L HSIP++LL  +L   PNGS+VPSS+P+  + I+N  + +  +NN
Sbjct: 83  SNIINQQDSVTEFLLRHSIPSSLLFEHLNLIPNGSIVPSSLPHYTLEISNGGRSNYFLNN 142

Query: 135 ARIVTPNVCLNSSIRCHGISTTMTYDRTSFSDTYLRSRVRP 172
            +I++ N+C   SI+CHGI   +    T   D+   +   P
Sbjct: 143 VKIISRNICSLGSIKCHGIDGILQSPSTVDDDSPRNNHTLP 182

[Close]

BLAST of CmoCh19G008850 vs. NCBI nr
Match: gi|449463404|ref|XP_004149424.1| (PREDICTED: uncharacterized protein LOC101220860 [Cucumis sativus])

HSP 1 Score: 278.9 bits (712), Expect = 7.0e-72
Identity = 142/196 (72.45%), Postives = 161/196 (82.14%), Query Frame = 1


Query: 3   APWFFVLLFFVGKAQATPIDQPDLQAAMDDMISKSYHGFVILLKILNSSHKDWQNSELTF 62
           APWFFVLLF V KA AT  +Q DLQAAMD+M  KSYHGF ILLKILNS+ K  QNS +TF
Sbjct: 2   APWFFVLLFLVAKAHATMTNQIDLQAAMDEMRLKSYHGFAILLKILNSTTKTLQNSNITF 61

Query: 63  FMPPDQELSRAAISPERIHDFVLSHSIPTALLLNNLLHFPNGSLVPSSIPNRMIRITNCR 122
           FMP DQELS+A ISP+R+ +FVLSHSIPTALLLNNLLHFPNG+LVPSSIPNRMIRITNCR
Sbjct: 62  FMPTDQELSQADISPDRLEEFVLSHSIPTALLLNNLLHFPNGTLVPSSIPNRMIRITNCR 121

Query: 123 KMSVCVNNARIVTPNVCLNSSIRCHGISTTMTYDRTSFSDTYLRSRVRPKLYLKRNEKKA 182
           KM VC+NNARI+TPNVCL SSIRCHGIST ++YD+TSFSDT    +   ++ ++RNE K 
Sbjct: 122 KMGVCLNNARIITPNVCLTSSIRCHGISTAISYDKTSFSDTLPAKQSSAEIIVQRNEIKG 181

Query: 183 EKYLQSAAKKMNRPLH 199
            K LQS A K NR LH
Sbjct: 182 AKSLQSGAMKKNRSLH 197

[Close]

BLAST of CmoCh19G008850 vs. NCBI nr
Match: gi|659124020|ref|XP_008461950.1| (PREDICTED: uncharacterized protein LOC103500429 isoform X1 [Cucumis melo])

HSP 1 Score: 267.3 bits (682), Expect = 2.1e-68
Identity = 140/197 (71.07%), Postives = 156/197 (79.19%), Query Frame = 1


Query: 3   APWFFVLLFFVGKAQATPIDQPDLQAAMDDMISKSYHGFVILLKILNSSHKDWQNSELTF 62
           APWFFVLLF + KA AT  +Q DLQAAMD M  KSYHGF ILLKILNS+ K  QNS +TF
Sbjct: 2   APWFFVLLFLMTKAHATMTNQIDLQAAMDQMRLKSYHGFTILLKILNSTTKTLQNSNITF 61

Query: 63  FMPPDQELSRAAISPERIHDFVLSHSIPTALLLNNLLHFPNGSLVPSSIPNRMIRITNCR 122
           FMP DQELS+A ISP R+ DFVLSHSIPTALLLNNLLHFPNGSLVPSSIPNRMIRITNCR
Sbjct: 62  FMPTDQELSQADISPNRLKDFVLSHSIPTALLLNNLLHFPNGSLVPSSIPNRMIRITNCR 121

Query: 123 KMSVCVNNARIVTPNVCLNSSIRCHGISTTMTYDRTS-FSDTYLRSRVRPKLYLKRNEKK 182
           KM VCVNNARI+TPNVCL SSIRCHGIS+ ++YD+TS FSDT    +    + ++RNE  
Sbjct: 122 KMGVCVNNARIITPNVCLTSSIRCHGISSAISYDKTSAFSDTLPAKQSSADIIVQRNEMN 181

Query: 183 AEKYLQSAAKKMNRPLH 199
             K  +S A K NR LH
Sbjct: 182 GAKSSESGAMKKNRSLH 198

[Close]

BLAST of CmoCh19G008850 vs. NCBI nr
Match: gi|659124299|ref|XP_008462085.1| (PREDICTED: uncharacterized protein LOC103500524 [Cucumis melo])

HSP 1 Score: 256.1 bits (653), Expect = 4.9e-65
Identity = 134/195 (68.72%), Postives = 156/195 (80.00%), Query Frame = 1


Query: 4   PWFFVLLFFVGKAQATPIDQPDLQAAMDDMISKSYHGFVILLKILNSSHKDWQNSELTFF 63
           P FFVLL  + KAQA   +Q DLQAAMD+M  KSYHGFVILLKILN+S+K  QNS++TFF
Sbjct: 3   PSFFVLLLLLAKAQAIMTNQTDLQAAMDEMRLKSYHGFVILLKILNNSNKTLQNSDITFF 62

Query: 64  MPPDQELSRAAISPERIHDFVLSHSIPTALLLNNLLHFPNGSLVPSSIPNRMIRITNCRK 123
           MP DQELS+A IS +++ +FVLSHSIPT+LLLNNLLHFPNGSLVPSSIPNRMI+IT  RK
Sbjct: 63  MPTDQELSQADISLDQLEEFVLSHSIPTSLLLNNLLHFPNGSLVPSSIPNRMIKITKSRK 122

Query: 124 MSVCVNNARIVTPNVCLNSSIRCHGISTTMTYDRTSFSDTYLRSRVRPKLYLKRNEKKAE 183
           M VCVN ARIVTPNVCL SSIRCHGIST ++YD+TSFS+T    +   +  ++RNEKK  
Sbjct: 123 MGVCVNEARIVTPNVCLTSSIRCHGISTAISYDKTSFSETLPAKQNLAETIVQRNEKKGA 182

Query: 184 KYLQSAAKKMNRPLH 199
           K L SA  K NR LH
Sbjct: 183 KSLPSATTKKNRSLH 197

[Close]

BLAST of CmoCh19G008850 vs. NCBI nr
Match: gi|700188193|gb|KGN43426.1| (hypothetical protein Csa_7G033340 [Cucumis sativus])

HSP 1 Score: 255.8 bits (652), Expect = 6.4e-65
Identity = 133/195 (68.21%), Postives = 153/195 (78.46%), Query Frame = 1


Query: 4   PWFFVLLFFVGKAQATPIDQPDLQAAMDDMISKSYHGFVILLKILNSSHKDWQNSELTFF 63
           PWFFVLLF V KAQAT  +Q DLQAAMD+M  KSYHGFVILLKILN+S+K  QNS++TFF
Sbjct: 3   PWFFVLLFLVAKAQATMTNQTDLQAAMDEMRLKSYHGFVILLKILNNSNKTLQNSDITFF 62

Query: 64  MPPDQELSRAAISPERIHDFVLSHSIPTALLLNNLLHFPNGSLVPSSIPNRMIRITNCRK 123
           MP DQELS+A IS +++ +FVL HSIPT LLLNNL HFPNGSLVPSSIPNRMI+IT  R 
Sbjct: 63  MPTDQELSQADISLDQLEEFVLRHSIPTTLLLNNLSHFPNGSLVPSSIPNRMIKITKSRM 122

Query: 124 MSVCVNNARIVTPNVCLNSSIRCHGISTTMTYDRTSFSDTYLRSRVRPKLYLKRNEKKAE 183
           M VCVN+A IVTPNVCL SSIRCHGIST ++YD+ SFSDT    +   +  ++RNEKK  
Sbjct: 123 MGVCVNDALIVTPNVCLTSSIRCHGISTAISYDKNSFSDTLPAKQSLAEPIVQRNEKKGA 182

Query: 184 KYLQSAAKKMNRPLH 199
           K L S   K NR LH
Sbjct: 183 KSLPSTTMKKNRSLH 197

[Close]

BLAST of CmoCh19G008850 vs. NCBI nr
Match: gi|659124022|ref|XP_008461951.1| (PREDICTED: uncharacterized protein LOC103500429 isoform X2 [Cucumis melo])

HSP 1 Score: 242.3 bits (617), Expect = 7.3e-61
Identity = 127/178 (71.35%), Postives = 142/178 (79.78%), Query Frame = 1


Query: 22  DQPDLQAAMDDMISKSYHGFVILLKILNSSHKDWQNSELTFFMPPDQELSRAAISPERIH 81
           +Q DLQAAMD M  KSYHGF ILLKILNS+ K  QNS +TFFMP DQELS+A ISP R+ 
Sbjct: 3   NQIDLQAAMDQMRLKSYHGFTILLKILNSTTKTLQNSNITFFMPTDQELSQADISPNRLK 62

Query: 82  DFVLSHSIPTALLLNNLLHFPNGSLVPSSIPNRMIRITNCRKMSVCVNNARIVTPNVCLN 141
           DFVLSHSIPTALLLNNLLHFPNGSLVPSSIPNRMIRITNCRKM VCVNNARI+TPNVCL 
Sbjct: 63  DFVLSHSIPTALLLNNLLHFPNGSLVPSSIPNRMIRITNCRKMGVCVNNARIITPNVCLT 122

Query: 142 SSIRCHGISTTMTYDRTS-FSDTYLRSRVRPKLYLKRNEKKAEKYLQSAAKKMNRPLH 199
           SSIRCHGIS+ ++YD+TS FSDT    +    + ++RNE    K  +S A K NR LH
Sbjct: 123 SSIRCHGISSAISYDKTSAFSDTLPAKQSSADIIVQRNEMNGAKSSESGAMKKNRSLH 180

The following BLAST results are available for this feature:

BLAST of CmoCh19G008850 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh19G008850 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7Q8_CUCSA	4.9e-72	72.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G272100 PE=4 SV=1	[more]
A0A0A0K6H7_CUCSA	4.4e-65	68.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G033340 PE=4 SV=1	[more]
A0A151S043_CAJCA	3.5e-46	63.06	Uncharacterized protein OS=Cajanus cajan GN=KK1_030232 PE=4 SV=1	[more]
K7M477_SOYBN	5.1e-45	53.81	Uncharacterized protein OS=Glycine max GN=GLYMA_14G007200 PE=4 SV=1	[more]
G7KEP1_MEDTR	2.5e-44	58.75	Fasciclin-like arabinogalactan protein OS=Medicago truncatula GN=MTR_5g097370 PE...	[more]

BLAST of CmoCh19G008850 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G26730.1	2.8e-34	48.03	Fasciclin-like arabinogalactan family protein	[more]
AT5G16920.1	3.3e-19	33.54	Fasciclin-like arabinogalactan family protein	[more]

BLAST of CmoCh19G008850 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463404\|ref\|XP_004149424.1\|	7.0e-72	72.45	PREDICTED: uncharacterized protein LOC101220860 [Cucumis sativus]	[more]
gi\|659124020\|ref\|XP_008461950.1\|	2.1e-68	71.07	PREDICTED: uncharacterized protein LOC103500429 isoform X1 [Cucumis melo]	[more]
gi\|659124299\|ref\|XP_008462085.1\|	4.9e-65	68.72	PREDICTED: uncharacterized protein LOC103500524 [Cucumis melo]	[more]
gi\|700188193\|gb\|KGN43426.1\|	6.4e-65	68.21	hypothetical protein Csa_7G033340 [Cucumis sativus]	[more]
gi\|659124022\|ref\|XP_008461951.1\|	7.3e-61	71.35	PREDICTED: uncharacterized protein LOC103500429 isoform X2 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000782	FAS1_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G008850.1	CmoCh19G008850.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000782	FAS1 domain	GENE3D	G3DSA:2.30.180.10		coord: 56..151 score: 4.
IPR000782	FAS1 domain	unknown	SSF82153	FAS1 domain	coord: 53..150 score: 2.3
None	No IPR available	PANTHER	PTHR36069	FAMILY NOT NAMED	coord: 1..172 score: 4.8
None	No IPR available	PANTHER	PTHR36069:SF2	FASCICLIN-LIKE ARABINOGALACTAN FAMILY PROTEIN	coord: 1..172 score: 4.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh19G008850	Cla015675	Watermelon (97103) v1	cmowmB496
CmoCh19G008850	Csa7G033340	Cucumber (Chinese Long) v2	cmocuB518
CmoCh19G008850	MELO3C024208	Melon (DHL92) v3.5.1	cmomeB452
CmoCh19G008850	ClCG02G002710	Watermelon (Charleston Gray)	cmowcgB459
CmoCh19G008850	CSPI07G02820	Wild cucumber (PI 183967)	cmocpiB524
CmoCh19G008850	Lsi11G013590	Bottle gourd (USVL1VR-Ls)	cmolsiB457
CmoCh19G008850	Cp4.1LG15g07060	Cucurbita pepo (Zucchini)	cmocpeB481
CmoCh19G008850	Cp4.1LG04g04020	Cucurbita pepo (Zucchini)	cmocpeB492
CmoCh19G008850	MELO3C028604.2	Melon (DHL92) v3.6.1	cmomedB521
CmoCh19G008850	CsaV3_7G002660	Cucumber (Chinese Long) v3	cmocucB0622
CmoCh19G008850	Cla97C02G029190	Watermelon (97103) v2	cmowmbB512
CmoCh19G008850	Bhi05G001278	Wax gourd	cmowgoB0653
CmoCh19G008850	Carg18070	Silver-seed gourd	carcmoB1430
CmoCh19G008850	Carg04156	Silver-seed gourd	carcmoB0286

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh19G008850	CmoCh11G018350	Cucurbita moschata (Rifu)	cmocmoB108

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh19G008850	Cucurbita moschata (Rifu)	cmocmoB381
CmoCh19G008850	Cucumber (Gy14) v1	cgycmoB0210
CmoCh19G008850	Cucumber (Gy14) v1	cgycmoB0294
CmoCh19G008850	Cucurbita maxima (Rimu)	cmacmoB145
CmoCh19G008850	Cucurbita maxima (Rimu)	cmacmoB508
CmoCh19G008850	Cucurbita maxima (Rimu)	cmacmoB549
CmoCh19G008850	Wild cucumber (PI 183967)	cmocpiB520
CmoCh19G008850	Melon (DHL92) v3.5.1	cmomeB443
CmoCh19G008850	Cucurbita pepo (Zucchini)	cmocpeB483
CmoCh19G008850	Bottle gourd (USVL1VR-Ls)	cmolsiB452
CmoCh19G008850	Cucumber (Gy14) v2	cgybcmoB763
CmoCh19G008850	Cucumber (Gy14) v2	cgybcmoB927
CmoCh19G008850	Melon (DHL92) v3.6.1	cmomedB513
CmoCh19G008850	Silver-seed gourd	carcmoB0471
CmoCh19G008850	Silver-seed gourd	carcmoB1091
CmoCh19G008850	Cucumber (Chinese Long) v3	cmocucB0617
CmoCh19G008850	Watermelon (97103) v2	cmowmbB511
CmoCh19G008850	Wax gourd	cmowgoB0663