Cla015675 (gene) Watermelon (97103) v1

Overview
NameCla015675
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionFasciclin-like arabinogalactan family protein (AHRD V1 ***- F4K185_ARATH); contains Interpro domain(s) IPR000782 FAS1 domain
LocationChr2 : 2538308 .. 2538901 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCCCTGGTTTTTTGTTTTTCTCTTCTTAGTTGCAAAAGCTCAGGCTACAACGATTAACCAAACCGACTTGCAAGTGGCCATGGATGAGATGAGATTGAAATCTTACCATGGCTTTGTCATACTACTCAAGATCTTAAACAGCTCCCATAAAACCTTGCAAAACTCAGATATAACCTTCTTCATGCCCACTGATCAGGAACTTTCTCAAGCTGCAATCTCCCCGGACGGACTAGAAGATTTTGTTCTAAGCCATTCTATCCCCACAGCCTTACTGCTCAACAATCTTTTACACTTCCCAAATGGCAGCCTGGTTCCAACAAGCATCCCAAACAGAATGATCAGCATAACCAACTGCAGAAAGATGGGTGTGTGTGTGAACAATGCACGAATCGTCACCCCGAACGTGTGCTTAACCTCAACCATAAGATGTCATGGTATAAGCACAAGTATTACATATGACAAAACTTCCTTTTCAGATACTTTACCAGCCAAGCAGAGTTCAGCTGAAACTATAGTTCAAAGGAATGAAAAGAAAGGAGCAAAATCTTTACAGTCTGCAGCAATGAAGAAGAACCGTCCACTGCACTGA

mRNA sequence

ATGGCTCCCTGGTTTTTTGTTTTTCTCTTCTTAGTTGCAAAAGCTCAGGCTACAACGATTAACCAAACCGACTTGCAAGTGGCCATGGATGAGATGAGATTGAAATCTTACCATGGCTTTGTCATACTACTCAAGATCTTAAACAGCTCCCATAAAACCTTGCAAAACTCAGATATAACCTTCTTCATGCCCACTGATCAGGAACTTTCTCAAGCTGCAATCTCCCCGGACGGACTAGAAGATTTTGTTCTAAGCCATTCTATCCCCACAGCCTTACTGCTCAACAATCTTTTACACTTCCCAAATGGCAGCCTGGTTCCAACAAGCATCCCAAACAGAATGATCAGCATAACCAACTGCAGAAAGATGGGTGTGTGTGTGAACAATGCACGAATCGTCACCCCGAACGTGTGCTTAACCTCAACCATAAGATGTCATGGTATAAGCACAAGTATTACATATGACAAAACTTCCTTTTCAGATACTTTACCAGCCAAGCAGAGTTCAGCTGAAACTATAGTTCAAAGGAATGAAAAGAAAGGAGCAAAATCTTTACAGTCTGCAGCAATGAAGAAGAACCGTCCACTGCACTGA

Coding sequence (CDS)

ATGGCTCCCTGGTTTTTTGTTTTTCTCTTCTTAGTTGCAAAAGCTCAGGCTACAACGATTAACCAAACCGACTTGCAAGTGGCCATGGATGAGATGAGATTGAAATCTTACCATGGCTTTGTCATACTACTCAAGATCTTAAACAGCTCCCATAAAACCTTGCAAAACTCAGATATAACCTTCTTCATGCCCACTGATCAGGAACTTTCTCAAGCTGCAATCTCCCCGGACGGACTAGAAGATTTTGTTCTAAGCCATTCTATCCCCACAGCCTTACTGCTCAACAATCTTTTACACTTCCCAAATGGCAGCCTGGTTCCAACAAGCATCCCAAACAGAATGATCAGCATAACCAACTGCAGAAAGATGGGTGTGTGTGTGAACAATGCACGAATCGTCACCCCGAACGTGTGCTTAACCTCAACCATAAGATGTCATGGTATAAGCACAAGTATTACATATGACAAAACTTCCTTTTCAGATACTTTACCAGCCAAGCAGAGTTCAGCTGAAACTATAGTTCAAAGGAATGAAAAGAAAGGAGCAAAATCTTTACAGTCTGCAGCAATGAAGAAGAACCGTCCACTGCACTGA

Protein sequence

MAPWFFVFLFLVAKAQATTINQTDLQVAMDEMRLKSYHGFVILLKILNSSHKTLQNSDITFFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHFPNGSLVPTSIPNRMISITNCRKMGVCVNNARIVTPNVCLTSTIRCHGISTSITYDKTSFSDTLPAKQSSAETIVQRNEKKGAKSLQSAAMKKNRPLH
Homology
[Close]
BLAST of Cla015675 vs. TrEMBL
Match: A0A0A0K7Q8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G272100 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 1.2e-91
Identity = 172/197 (87.31%), Postives = 182/197 (92.39%), Query Frame = 1 

Query: 1   MAPWFFVFLFLVAKAQATTINQTDLQVAMDEMRLKSYHGFVILLKILNSSHKTLQNSDIT 60
           MAPWFFV LFLVAKA AT  NQ DLQ AMDEMRLKSYHGF ILLKILNS+ KTLQNS+IT
Sbjct: 1   MAPWFFVLLFLVAKAHATMTNQIDLQAAMDEMRLKSYHGFAILLKILNSTTKTLQNSNIT 60

Query: 61  FFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHFPNGSLVPTSIPNRMISITNC 120
           FFMPTDQELSQA ISPD LE+FVLSHSIPTALLLNNLLHFPNG+LVP+SIPNRMI ITNC
Sbjct: 61  FFMPTDQELSQADISPDRLEEFVLSHSIPTALLLNNLLHFPNGTLVPSSIPNRMIRITNC 120

Query: 121 RKMGVCVNNARIVTPNVCLTSTIRCHGISTSITYDKTSFSDTLPAKQSSAETIVQRNEKK 180
           RKMGVC+NNARI+TPNVCLTS+IRCHGIST+I+YDKTSFSDTLPAKQSSAE IVQRNE K
Sbjct: 121 RKMGVCLNNARIITPNVCLTSSIRCHGISTAISYDKTSFSDTLPAKQSSAEIIVQRNEIK 180

Query: 181 GAKSLQSAAMKKNRPLH 198
           GAKSLQS AMKKNR LH
Sbjct: 181 GAKSLQSGAMKKNRSLH 197

[Close]
BLAST of Cla015675 vs. TrEMBL
Match: A0A0A0K6H7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G033340 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 2.0e-86
Identity = 166/197 (84.26%), Postives = 174/197 (88.32%), Query Frame = 1 

Query: 1   MAPWFFVFLFLVAKAQATTINQTDLQVAMDEMRLKSYHGFVILLKILNSSHKTLQNSDIT 60
           M PWFFV LFLVAKAQAT  NQTDLQ AMDEMRLKSYHGFVILLKILN+S+KTLQNSDIT
Sbjct: 1   MTPWFFVLLFLVAKAQATMTNQTDLQAAMDEMRLKSYHGFVILLKILNNSNKTLQNSDIT 60

Query: 61  FFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHFPNGSLVPTSIPNRMISITNC 120
           FFMPTDQELSQA IS D LE+FVL HSIPT LLLNNL HFPNGSLVP+SIPNRMI IT  
Sbjct: 61  FFMPTDQELSQADISLDQLEEFVLRHSIPTTLLLNNLSHFPNGSLVPSSIPNRMIKITKS 120

Query: 121 RKMGVCVNNARIVTPNVCLTSTIRCHGISTSITYDKTSFSDTLPAKQSSAETIVQRNEKK 180
           R MGVCVN+A IVTPNVCLTS+IRCHGIST+I+YDK SFSDTLPAKQS AE IVQRNEKK
Sbjct: 121 RMMGVCVNDALIVTPNVCLTSSIRCHGISTAISYDKNSFSDTLPAKQSLAEPIVQRNEKK 180

Query: 181 GAKSLQSAAMKKNRPLH 198
           GAKSL S  MKKNR LH
Sbjct: 181 GAKSLPSTTMKKNRSLH 197

[Close]
BLAST of Cla015675 vs. TrEMBL
Match: A0A151S043_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_030232 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 4.4e-49
Identity = 101/158 (63.92%), Postives = 128/158 (81.01%), Query Frame = 1 

Query: 1   MAPWFFVFL--FLVAKAQATT-INQTDLQVAMDEMRLKSYHGFVILLKILNSSHKTLQNS 60
           MA WF V L  F + ++Q+TT  NQTDLQ AM +MR +SY GFVILLKILNS   +LQN+
Sbjct: 1   MALWFMVLLALFAIGESQSTTSFNQTDLQAAMTDMRSRSYFGFVILLKILNSQPNSLQNN 60

Query: 61  DITFFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHFPNGSLVPTSIPNRMISI 120
           D+TF MP D+ELS  +I+ D L DF+LSHSIPT LLL++LLHFPNGS+VP+S+P+R+ISI
Sbjct: 61  DLTFLMPNDEELSHFSIALDQLHDFILSHSIPTPLLLSHLLHFPNGSVVPSSVPSRVISI 120

Query: 121 TNCRKMGVCVNNARIVTPNVCLTSTIRCHGISTSITYD 156
           TN  + G+ VNNARIVTPNVC +S+IRCHGIS ++T+D
Sbjct: 121 TNSGRTGLFVNNARIVTPNVCQSSSIRCHGISAALTFD 158

[Close]
BLAST of Cla015675 vs. TrEMBL
Match: K7M477_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G007200 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.3e-48
Identity = 101/167 (60.48%), Postives = 131/167 (78.44%), Query Frame = 1 

Query: 1   MAPWFFVFL--FLVAKAQAT-TINQTDLQVAMDEMRLKSYHGFVILLKILNSSHKTLQNS 60
           MA WF + L  F + ++Q+T + NQTDLQ AM +MR +SY+GFVILLKILNS   +LQN+
Sbjct: 1   MAIWFVILLTFFAIGESQSTMSFNQTDLQAAMTDMRSRSYYGFVILLKILNSQPNSLQNN 60

Query: 61  DITFFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHFPNGSLVPTSIPNRMISI 120
           D+TF MP D ELSQ +I+ D L DF+LSHSIPT L+L++LLHFPNGS+VP+S+P+R+ISI
Sbjct: 61  DLTFLMPNDDELSQFSIALDQLHDFILSHSIPTPLVLSHLLHFPNGSVVPSSVPSRVISI 120

Query: 121 TNCRKMGVCVNNARIVTPNVCLTSTIRCHGISTSITYDKTSFSDTLP 165
           TN  + G+ VNNARIVTPNVC +S+IRCHGIS ++T+D    S   P
Sbjct: 121 TNGGRTGLFVNNARIVTPNVCQSSSIRCHGISAALTFDNMVPSHRAP 167

[Close]
BLAST of Cla015675 vs. TrEMBL
Match: V7BC91_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G285700g PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.2e-48
Identity = 102/157 (64.97%), Postives = 127/157 (80.89%), Query Frame = 1 

Query: 1   MAPWFFVFL--FLVAKAQAT-TINQTDLQVAMDEMRLKSYHGFVILLKILNSSHKTLQNS 60
           MA W  V L  F +A++Q+T + NQTDLQVAM +MR +SYHGFVILLKILNS   +LQ +
Sbjct: 1   MALWCVVLLTLFAIAESQSTISFNQTDLQVAMADMRSRSYHGFVILLKILNSHQNSLQTN 60

Query: 61  DITFFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHFPNGSLVPTSIPNRMISI 120
           D+TF MP D ELSQ +IS D L DF+LSHSIPT LLL++LLHFPNGS+VP+SIP R+I+I
Sbjct: 61  DLTFLMPNDDELSQFSISLDQLPDFILSHSIPTPLLLSHLLHFPNGSVVPSSIPTRVINI 120

Query: 121 TNCRKMGVCVNNARIVTPNVCLTSTIRCHGISTSITY 155
           TN  + G+ VNNARIVTPNVC +S+IRCHGIS ++T+
Sbjct: 121 TNMGRTGLFVNNARIVTPNVCQSSSIRCHGISAALTF 157

[Close]
BLAST of Cla015675 vs. NCBI nr
Match: gi|449463404|ref|XP_004149424.1| (PREDICTED: uncharacterized protein LOC101220860 [Cucumis sativus])

HSP 1 Score: 344.0 bits (881), Expect = 1.8e-91
Identity = 172/197 (87.31%), Postives = 182/197 (92.39%), Query Frame = 1 

Query: 1   MAPWFFVFLFLVAKAQATTINQTDLQVAMDEMRLKSYHGFVILLKILNSSHKTLQNSDIT 60
           MAPWFFV LFLVAKA AT  NQ DLQ AMDEMRLKSYHGF ILLKILNS+ KTLQNS+IT
Sbjct: 1   MAPWFFVLLFLVAKAHATMTNQIDLQAAMDEMRLKSYHGFAILLKILNSTTKTLQNSNIT 60

Query: 61  FFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHFPNGSLVPTSIPNRMISITNC 120
           FFMPTDQELSQA ISPD LE+FVLSHSIPTALLLNNLLHFPNG+LVP+SIPNRMI ITNC
Sbjct: 61  FFMPTDQELSQADISPDRLEEFVLSHSIPTALLLNNLLHFPNGTLVPSSIPNRMIRITNC 120

Query: 121 RKMGVCVNNARIVTPNVCLTSTIRCHGISTSITYDKTSFSDTLPAKQSSAETIVQRNEKK 180
           RKMGVC+NNARI+TPNVCLTS+IRCHGIST+I+YDKTSFSDTLPAKQSSAE IVQRNE K
Sbjct: 121 RKMGVCLNNARIITPNVCLTSSIRCHGISTAISYDKTSFSDTLPAKQSSAEIIVQRNEIK 180

Query: 181 GAKSLQSAAMKKNRPLH 198
           GAKSLQS AMKKNR LH
Sbjct: 181 GAKSLQSGAMKKNRSLH 197

[Close]
BLAST of Cla015675 vs. NCBI nr
Match: gi|659124020|ref|XP_008461950.1| (PREDICTED: uncharacterized protein LOC103500429 isoform X1 [Cucumis melo])

HSP 1 Score: 328.6 bits (841), Expect = 7.7e-87
Identity = 165/198 (83.33%), Postives = 179/198 (90.40%), Query Frame = 1 

Query: 1   MAPWFFVFLFLVAKAQATTINQTDLQVAMDEMRLKSYHGFVILLKILNSSHKTLQNSDIT 60
           MAPWFFV LFL+ KA AT  NQ DLQ AMD+MRLKSYHGF ILLKILNS+ KTLQNS+IT
Sbjct: 1   MAPWFFVLLFLMTKAHATMTNQIDLQAAMDQMRLKSYHGFTILLKILNSTTKTLQNSNIT 60

Query: 61  FFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHFPNGSLVPTSIPNRMISITNC 120
           FFMPTDQELSQA ISP+ L+DFVLSHSIPTALLLNNLLHFPNGSLVP+SIPNRMI ITNC
Sbjct: 61  FFMPTDQELSQADISPNRLKDFVLSHSIPTALLLNNLLHFPNGSLVPSSIPNRMIRITNC 120

Query: 121 RKMGVCVNNARIVTPNVCLTSTIRCHGISTSITYDKTS-FSDTLPAKQSSAETIVQRNEK 180
           RKMGVCVNNARI+TPNVCLTS+IRCHGIS++I+YDKTS FSDTLPAKQSSA+ IVQRNE 
Sbjct: 121 RKMGVCVNNARIITPNVCLTSSIRCHGISSAISYDKTSAFSDTLPAKQSSADIIVQRNEM 180

Query: 181 KGAKSLQSAAMKKNRPLH 198
            GAKS +S AMKKNR LH
Sbjct: 181 NGAKSSESGAMKKNRSLH 198

[Close]
BLAST of Cla015675 vs. NCBI nr
Match: gi|700188193|gb|KGN43426.1| (hypothetical protein Csa_7G033340 [Cucumis sativus])

HSP 1 Score: 326.6 bits (836), Expect = 2.9e-86
Identity = 166/197 (84.26%), Postives = 174/197 (88.32%), Query Frame = 1 

Query: 1   MAPWFFVFLFLVAKAQATTINQTDLQVAMDEMRLKSYHGFVILLKILNSSHKTLQNSDIT 60
           M PWFFV LFLVAKAQAT  NQTDLQ AMDEMRLKSYHGFVILLKILN+S+KTLQNSDIT
Sbjct: 1   MTPWFFVLLFLVAKAQATMTNQTDLQAAMDEMRLKSYHGFVILLKILNNSNKTLQNSDIT 60

Query: 61  FFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHFPNGSLVPTSIPNRMISITNC 120
           FFMPTDQELSQA IS D LE+FVL HSIPT LLLNNL HFPNGSLVP+SIPNRMI IT  
Sbjct: 61  FFMPTDQELSQADISLDQLEEFVLRHSIPTTLLLNNLSHFPNGSLVPSSIPNRMIKITKS 120

Query: 121 RKMGVCVNNARIVTPNVCLTSTIRCHGISTSITYDKTSFSDTLPAKQSSAETIVQRNEKK 180
           R MGVCVN+A IVTPNVCLTS+IRCHGIST+I+YDK SFSDTLPAKQS AE IVQRNEKK
Sbjct: 121 RMMGVCVNDALIVTPNVCLTSSIRCHGISTAISYDKNSFSDTLPAKQSLAEPIVQRNEKK 180

Query: 181 GAKSLQSAAMKKNRPLH 198
           GAKSL S  MKKNR LH
Sbjct: 181 GAKSLPSTTMKKNRSLH 197

[Close]
BLAST of Cla015675 vs. NCBI nr
Match: gi|659124299|ref|XP_008462085.1| (PREDICTED: uncharacterized protein LOC103500524 [Cucumis melo])

HSP 1 Score: 325.5 bits (833), Expect = 6.5e-86
Identity = 166/197 (84.26%), Postives = 177/197 (89.85%), Query Frame = 1 

Query: 1   MAPWFFVFLFLVAKAQATTINQTDLQVAMDEMRLKSYHGFVILLKILNSSHKTLQNSDIT 60
           M P FFV L L+AKAQA   NQTDLQ AMDEMRLKSYHGFVILLKILN+S+KTLQNSDIT
Sbjct: 1   MTPSFFVLLLLLAKAQAIMTNQTDLQAAMDEMRLKSYHGFVILLKILNNSNKTLQNSDIT 60

Query: 61  FFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHFPNGSLVPTSIPNRMISITNC 120
           FFMPTDQELSQA IS D LE+FVLSHSIPT+LLLNNLLHFPNGSLVP+SIPNRMI IT  
Sbjct: 61  FFMPTDQELSQADISLDQLEEFVLSHSIPTSLLLNNLLHFPNGSLVPSSIPNRMIKITKS 120

Query: 121 RKMGVCVNNARIVTPNVCLTSTIRCHGISTSITYDKTSFSDTLPAKQSSAETIVQRNEKK 180
           RKMGVCVN ARIVTPNVCLTS+IRCHGIST+I+YDKTSFS+TLPAKQ+ AETIVQRNEKK
Sbjct: 121 RKMGVCVNEARIVTPNVCLTSSIRCHGISTAISYDKTSFSETLPAKQNLAETIVQRNEKK 180

Query: 181 GAKSLQSAAMKKNRPLH 198
           GAKSL SA  KKNR LH
Sbjct: 181 GAKSLPSATTKKNRSLH 197

[Close]
BLAST of Cla015675 vs. NCBI nr
Match: gi|659124022|ref|XP_008461951.1| (PREDICTED: uncharacterized protein LOC103500429 isoform X2 [Cucumis melo])

HSP 1 Score: 300.1 bits (767), Expect = 2.9e-78
Identity = 151/178 (84.83%), Postives = 164/178 (92.13%), Query Frame = 1 

Query: 21  NQTDLQVAMDEMRLKSYHGFVILLKILNSSHKTLQNSDITFFMPTDQELSQAAISPDGLE 80
           NQ DLQ AMD+MRLKSYHGF ILLKILNS+ KTLQNS+ITFFMPTDQELSQA ISP+ L+
Sbjct: 3   NQIDLQAAMDQMRLKSYHGFTILLKILNSTTKTLQNSNITFFMPTDQELSQADISPNRLK 62

Query: 81  DFVLSHSIPTALLLNNLLHFPNGSLVPTSIPNRMISITNCRKMGVCVNNARIVTPNVCLT 140
           DFVLSHSIPTALLLNNLLHFPNGSLVP+SIPNRMI ITNCRKMGVCVNNARI+TPNVCLT
Sbjct: 63  DFVLSHSIPTALLLNNLLHFPNGSLVPSSIPNRMIRITNCRKMGVCVNNARIITPNVCLT 122

Query: 141 STIRCHGISTSITYDKTS-FSDTLPAKQSSAETIVQRNEKKGAKSLQSAAMKKNRPLH 198
           S+IRCHGIS++I+YDKTS FSDTLPAKQSSA+ IVQRNE  GAKS +S AMKKNR LH
Sbjct: 123 SSIRCHGISSAISYDKTSAFSDTLPAKQSSADIIVQRNEMNGAKSSESGAMKKNRSLH 180

The following BLAST results are available for this feature:
BLAST of Cla015675 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7Q8_CUCSA1.2e-9187.31Uncharacterized protein OS=Cucumis sativus GN=Csa_7G272100 PE=4 SV=1[more]
A0A0A0K6H7_CUCSA2.0e-8684.26Uncharacterized protein OS=Cucumis sativus GN=Csa_7G033340 PE=4 SV=1[more]
A0A151S043_CAJCA4.4e-4963.92Uncharacterized protein OS=Cajanus cajan GN=KK1_030232 PE=4 SV=1[more]
K7M477_SOYBN1.3e-4860.48Uncharacterized protein OS=Glycine max GN=GLYMA_14G007200 PE=4 SV=1[more]
V7BC91_PHAVU2.2e-4864.97Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G285700g PE=4 SV=1[more]
BLAST of Cla015675 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449463404|ref|XP_004149424.1|1.8e-9187.31PREDICTED: uncharacterized protein LOC101220860 [Cucumis sativus][more]
gi|659124020|ref|XP_008461950.1|7.7e-8783.33PREDICTED: uncharacterized protein LOC103500429 isoform X1 [Cucumis melo][more]
gi|700188193|gb|KGN43426.1|2.9e-8684.26hypothetical protein Csa_7G033340 [Cucumis sativus][more]
gi|659124299|ref|XP_008462085.1|6.5e-8684.26PREDICTED: uncharacterized protein LOC103500524 [Cucumis melo][more]
gi|659124022|ref|XP_008461951.1|2.9e-7884.83PREDICTED: uncharacterized protein LOC103500429 isoform X2 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000782FAS1_domain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla015675Cla015675.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000782FAS1 domainGENE3DG3DSA:2.30.180.10coord: 39..150
score: 8.
IPR000782FAS1 domainPFAMPF02469Fasciclincoord: 48..141
score: 1.
IPR000782FAS1 domainSMARTSM00554fasc_3coord: 60..155
score: 2.
IPR000782FAS1 domainunknownSSF82153FAS1 domaincoord: 40..149
score: 1.2
NoneNo IPR availablePANTHERPTHR36069FAMILY NOT NAMEDcoord: 1..177
score: 1.2
NoneNo IPR availablePANTHERPTHR36069:SF2FASCICLIN-LIKE ARABINOGALACTAN FAMILY PROTEINcoord: 1..177
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla015675Cla97C02G029190Watermelon (97103) v2wmwmbB317
Cla015675Csa7G033340Cucumber (Chinese Long) v2cuwmB604
Cla015675MELO3C024208Melon (DHL92) v3.5.1mewmB241
Cla015675ClCG02G002710Watermelon (Charleston Gray)wcgwmB198
Cla015675CSPI07G02820Wild cucumber (PI 183967)cpiwmB624
Cla015675CmoCh11G018350Cucurbita moschata (Rifu)cmowmB117
Cla015675CmoCh19G008850Cucurbita moschata (Rifu)cmowmB496
Cla015675Lsi11G013590Bottle gourd (USVL1VR-Ls)lsiwmB106
Cla015675Cp4.1LG04g04020Cucurbita pepo (Zucchini)cpewmB675
Cla015675Cp4.1LG15g07060Cucurbita pepo (Zucchini)cpewmB268
Cla015675MELO3C028604.2Melon (DHL92) v3.6.1medwmB233
Cla015675Carg04156Silver-seed gourdcarwmB0194
Cla015675Carg18070Silver-seed gourdcarwmB1066
Cla015675CsaV3_7G002660Cucumber (Chinese Long) v3cucwmB634
Cla015675Bhi05G001278Wax gourdwgowmB272
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla015675Cucumber (Gy14) v1cgywmB130
Cla015675Cucumber (Gy14) v1cgywmB186
Cla015675Cucurbita maxima (Rimu)cmawmB121
Cla015675Cucurbita maxima (Rimu)cmawmB503
Cla015675Cucurbita maxima (Rimu)cmawmB527
Cla015675Cucurbita maxima (Rimu)cmawmB591
Cla015675Cucurbita moschata (Rifu)cmowmB515
Cla015675Melon (DHL92) v3.5.1mewmB110
Cla015675Watermelon (Charleston Gray)wcgwmB079
Cla015675Watermelon (Charleston Gray)wcgwmB215
Cla015675Cucumber (Chinese Long) v2cuwmB516
Cla015675Cucurbita pepo (Zucchini)cpewmB305
Cla015675Bottle gourd (USVL1VR-Ls)lsiwmB080
Cla015675Cucumber (Gy14) v2cgybwmB484
Cla015675Cucumber (Gy14) v2cgybwmB566
Cla015675Melon (DHL92) v3.6.1medwmB109
Cla015675Silver-seed gourdcarwmB0334
Cla015675Silver-seed gourdcarwmB0809
Cla015675Cucumber (Chinese Long) v3cucwmB541
Cla015675Watermelon (97103) v2wmwmbB333
Cla015675Wax gourdwgowmB403