Cp4.1LG15g06740 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG15g06740
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionMitochondrial transcription termination factor family protein
LocationCp4.1LG15 : 7279827 .. 7280813 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATTAGCGGCAGTCGAAATGGTACTAGTATGCTATGGTTCTTCAGGGACAAAGGATTTGATGATGGAAGCATTGATAAGATGTTTAAAAAGTGTAGGCGTTTGGAAGGTATGCAGAATGAAAGAGCTGCTGAAAATTGGGAATATTTGGAAGGAATTGGGATTCAAAAGAGGAAACTCCCTTCTGTTGTTTCCAAATGTCCTAAGATTCTAGTTCTTGGTCTTCAAGAGAAAATTGCTCCCATGGTTGAGTGCCTTGCAACACTCAGCACTAAGCCTCGTGAAATTGCTACAGCTATTGCCAAATTTCCTGGCATTCTTTCCTATAGTGTTGAAGAGAAGCTATGCCCACTTTTGGCTTTCTTTCAAGCTCTGGGTGTCCCTGAAAAGCAGCTTGGAAAGATGATTCTACTCAACCCGAGGCTTATTAGCTACAGCATTGAATCGAAGCTCATTGAAACTGTGGATTTTCTTGCTGGGGTTGGGCTAACGAAGGATGGGATGATTGGAAAAGTTCTAGCAAAAAATCCATTTCTCATTGGATATAGTGTTCATAAAAGGCTCCGTCCTACTTTCGAGTTTCTGAAATCGATCGGTCTCAGTGAGATGGATCTTCAAGCAGTTGCATTGAAATTTCCAGACATTTTGTGTAGGGATGTGGACAAAGTTTTGAGACCCAATTTGGATTACCTGAGGAGAAGTGGGTTTAAAGATGGAGAAATAGTGTCTTTGGTGACTGGTTATCCTCCTATTTTGATCAAGAGCATTCAACATTCTTTAGAACCTCGGATCAGATTTTTAGTTGAAATAATGGGAAGAACACTTGACGAAGTTGCCGAATATCCCGAGTTTTTTAAGCATGGTTTGAAGAAAAGACTCGAGTTGCGGCATAGATTGTTGAAAGAGAAGACAACGGACTTTACCTTGAGTGAATTGTTGGAATGCAATCAAAAGAAGTTTATGATGAAAATGAGTTTGTTATGA

mRNA sequence

ATGGAAATTAGCGGCAGTCGAAATGGTACTAGTATGCTATGGTTCTTCAGGGACAAAGGATTTGATGATGGAAGCATTGATAAGATGTTTAAAAAGTGTAGGCGTTTGGAAGGTATGCAGAATGAAAGAGCTGCTGAAAATTGGGAATATTTGGAAGGAATTGGGATTCAAAAGAGGAAACTCCCTTCTGTTGTTTCCAAATGTCCTAAGATTCTAGTTCTTGGTCTTCAAGAGAAAATTGCTCCCATGGTTGAGTGCCTTGCAACACTCAGCACTAAGCCTCGTGAAATTGCTACAGCTATTGCCAAATTTCCTGGCATTCTTTCCTATAGTGTTGAAGAGAAGCTATGCCCACTTTTGGCTTTCTTTCAAGCTCTGGGTGTCCCTGAAAAGCAGCTTGGAAAGATGATTCTACTCAACCCGAGGCTTATTAGCTACAGCATTGAATCGAAGCTCATTGAAACTGTGGATTTTCTTGCTGGGGTTGGGCTAACGAAGGATGGGATGATTGGAAAAGTTCTAGCAAAAAATCCATTTCTCATTGGATATAGTGTTCATAAAAGGCTCCGTCCTACTTTCGAGTTTCTGAAATCGATCGGTCTCAGTGAGATGGATCTTCAAGCAGTTGCATTGAAATTTCCAGACATTTTGTGTAGGGATGTGGACAAAGTTTTGAGACCCAATTTGGATTACCTGAGGAGAAGTGGGTTTAAAGATGGAGAAATAGTGTCTTTGGTGACTGGTTATCCTCCTATTTTGATCAAGAGCATTCAACATTCTTTAGAACCTCGGATCAGATTTTTAGTTGAAATAATGGGAAGAACACTTGACGAAGTTGCCGAATATCCCGAGTTTTTTAAGCATGGTTTGAAGAAAAGACTCGAGTTGCGGCATAGATTGTTGAAAGAGAAGACAACGGACTTTACCTTGAGTGAATTGTTGGAATGCAATCAAAAGAAGTTTATGATGAAAATGAGTTTGTTATGA

Coding sequence (CDS)

ATGGAAATTAGCGGCAGTCGAAATGGTACTAGTATGCTATGGTTCTTCAGGGACAAAGGATTTGATGATGGAAGCATTGATAAGATGTTTAAAAAGTGTAGGCGTTTGGAAGGTATGCAGAATGAAAGAGCTGCTGAAAATTGGGAATATTTGGAAGGAATTGGGATTCAAAAGAGGAAACTCCCTTCTGTTGTTTCCAAATGTCCTAAGATTCTAGTTCTTGGTCTTCAAGAGAAAATTGCTCCCATGGTTGAGTGCCTTGCAACACTCAGCACTAAGCCTCGTGAAATTGCTACAGCTATTGCCAAATTTCCTGGCATTCTTTCCTATAGTGTTGAAGAGAAGCTATGCCCACTTTTGGCTTTCTTTCAAGCTCTGGGTGTCCCTGAAAAGCAGCTTGGAAAGATGATTCTACTCAACCCGAGGCTTATTAGCTACAGCATTGAATCGAAGCTCATTGAAACTGTGGATTTTCTTGCTGGGGTTGGGCTAACGAAGGATGGGATGATTGGAAAAGTTCTAGCAAAAAATCCATTTCTCATTGGATATAGTGTTCATAAAAGGCTCCGTCCTACTTTCGAGTTTCTGAAATCGATCGGTCTCAGTGAGATGGATCTTCAAGCAGTTGCATTGAAATTTCCAGACATTTTGTGTAGGGATGTGGACAAAGTTTTGAGACCCAATTTGGATTACCTGAGGAGAAGTGGGTTTAAAGATGGAGAAATAGTGTCTTTGGTGACTGGTTATCCTCCTATTTTGATCAAGAGCATTCAACATTCTTTAGAACCTCGGATCAGATTTTTAGTTGAAATAATGGGAAGAACACTTGACGAAGTTGCCGAATATCCCGAGTTTTTTAAGCATGGTTTGAAGAAAAGACTCGAGTTGCGGCATAGATTGTTGAAAGAGAAGACAACGGACTTTACCTTGAGTGAATTGTTGGAATGCAATCAAAAGAAGTTTATGATGAAAATGAGTTTGTTATGA

Protein sequence

MEISGSRNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRKLPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKDGMIGKVLAKNPFLIGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRSGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRLLKEKTTDFTLSELLECNQKKFMMKMSLL
Homology
[Close]
BLAST of Cp4.1LG15g06740 vs. Swiss-Prot
Match: MTEF6_ARATH (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 8.8e-120
Identity = 210/319 (65.83%), Postives = 263/319 (82.45%), Query Frame = 1 

Query: 8   NGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGI-GIQKRKLPSVVS 67
           N +S++WFFRDKGFDD SIDKM +KC++LE  Q++ A+ENW+YL  I GIQ+RKLP +VS
Sbjct: 5   NTSSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVS 64

Query: 68  KCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLLAFFQAL 127
           +CPKIL L L E++ PMVECL++L   PRE+A+AI KFP ILS+SVEEKLCPLLAFFQAL
Sbjct: 65  RCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQAL 124

Query: 128 GVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKDGMIGKVLAKNPFLIGYSVH 187
           GVPE QLGKMIL NPRLISYSI++KL   V FLA +GL +DGMIGKVL KNPFL+GYSV 
Sbjct: 125 GVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVD 184

Query: 188 KRLRPTFEFLK-SIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRSGFKDGEIVSL 247
           KRLRPT EFLK S+GLSE  +++V + FP +LCRDV+K+L+PN DYL+  GF D +I ++
Sbjct: 185 KRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATM 244

Query: 248 VTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRLLKEKT 307
           VTGYP ILIKS+++SL+PRIRFLV++MGR +DEVA YPEFF HGLKK++E R +L+K+  
Sbjct: 245 VTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNN 304

Query: 308 TDFTLSELLECNQKKFMMK 325
            D +L E+L+CN KKF  K
Sbjct: 305 IDCSLREMLDCNTKKFHEK 323

[Close]
BLAST of Cp4.1LG15g06740 vs. Swiss-Prot
Match: MTEF5_ARATH (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana GN=MTERF5 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 4.6e-28
Identity = 79/283 (27.92%), Postives = 148/283 (52.30%), Query Frame = 1 

Query: 50  YLEGIGIQKRKLPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILS 109
           YL  +G+   ++ ++  K        L  KI P+VE L  L     +I T + K P I  
Sbjct: 202 YLLDLGLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICG 261

Query: 110 YSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKDGM 169
            S+ + L P +AF + LG+ + Q  K+I   P +++YS   KL  TV+FL+  GLT++  
Sbjct: 262 ISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILTYS-RQKLTSTVEFLSQTGLTEE-Q 321

Query: 170 IGKVLAKNPFLIGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNL 229
           IG++L + P ++ YSV  +LRPT E+ +S+    +D+  +  + P      ++  L+P  
Sbjct: 322 IGRILTRCPNIMSYSVEDKLRPTMEYFRSL---NVDVAVLLHRCPQTFGLSIESNLKPVT 381

Query: 230 DYLRRSGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHG 289
           ++    GF   EI  +++ Y  +   S++ ++ P+  +  + M     E+ ++P+FF + 
Sbjct: 382 EFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYF-QTMDYPKSELVKFPQFFGYS 441

Query: 290 LKKRLELRHRLLKEKTTDFTLSELLECN-------QKKFMMKM 326
           L++R++ R+ L++       L+++L  +        KK MMK+
Sbjct: 442 LQERIKPRYELVQRSGVRLLLNQVLSLSGIEFEKVVKKKMMKL 478

[Close]
BLAST of Cp4.1LG15g06740 vs. Swiss-Prot
Match: MTEF2_ARATH (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.8e-27
Identity = 73/291 (25.09%), Postives = 146/291 (50.17%), Query Frame = 1 

Query: 32  KCRRLEGMQNERAAENWEYLEGIGIQKRKLPSVVSKCPKILVLGLQEKIAPMVECLATLS 91
           +C  L     E      ++   +G+ +    ++V   PKI+     + +   +  L    
Sbjct: 304 RCPELLSFSMEEVKSRVDFFLKMGMNQNDFGTMVYDYPKIIGFFSFQVMEKKINYLKEFG 363

Query: 92  TKPREIATAIAKFPGILSYSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESK 151
               E+   +A  P ++  S+EE+  PL+ +F  LG+P++ + +++++ P L    +E  
Sbjct: 364 LSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKT 423

Query: 152 LIETVDFLAGVGLTKDGMIGKVLAKNPFLIGYSVHKRLRPTFEFLKS-IGLSEMDLQAVA 211
           +   V FL  +G+  +  IG +L K P L+  S++K++RP   FL +  G+++ D+  V 
Sbjct: 424 IAPKVRFLQEMGIPNEA-IGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVI 483

Query: 212 LKFPDILCRDVDKVLRPNLDYLRRSGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVE 271
              P +L   +   L PN+ Y    G +  ++  ++  +P +L  ++  +L P+ R+L  
Sbjct: 484 AMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVD-NLRPKYRYLRR 543

Query: 272 IMGRTLDEVAEYPEFFKHGLKKRLELRHRLLKEKTTDFTLSELLECNQKKF 322
            M R L ++ E+P FF + L++R+  RH ++ E   +F L  +L C  ++F
Sbjct: 544 TMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENRVNFKLRYMLACTDEEF 592

[Close]
BLAST of Cp4.1LG15g06740 vs. Swiss-Prot
Match: MTEF9_ARATH (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 7.6e-23
Identity = 70/266 (26.32%), Postives = 134/266 (50.38%), Query Frame = 1 

Query: 54  IGIQKRKLPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVE 113
           + + +R +PS+     +I V   QE++    + L ++  K R+I   + + P IL Y+VE
Sbjct: 202 VQMYERHMPSL-----QINVFSAQERL----DYLLSVGVKHRDIKRMLLRQPQILQYTVE 261

Query: 114 EKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKDGMIGKV 173
             L   ++F   LG+P  ++G+++   P L SYS+E+ L  T+ +L      K+  +GKV
Sbjct: 262 NNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPTIRYLIEEVGIKETDVGKV 321

Query: 174 LAKNPFLIGYSVHKRLRPTFEFL-KSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYL 233
           +  +P ++   +       + FL K +G     +  +  K P +L   +D    P +++L
Sbjct: 322 VQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGFLPRINFL 381

Query: 234 RRSGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKK 293
           R  G  + +I+ ++T    +L  S++ +L+P+  +LV  +   +  + +YP +    L +
Sbjct: 382 RSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQ 441

Query: 294 RLELRHRLL----KEKTTDFTLSELL 315
           R+  RHR L    K +   F LS L+
Sbjct: 442 RIRPRHRFLVELKKVRKGPFPLSSLV 458

[Close]
BLAST of Cp4.1LG15g06740 vs. Swiss-Prot
Match: MTEF4_ARATH (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.7e-22
Identity = 65/279 (23.30%), Postives = 143/279 (51.25%), Query Frame = 1 

Query: 49  EYLEGIGIQKRKLPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGIL 108
           +YL+G+ I+   +P V+ + P++L   L+  ++  V  L  +    REI   + ++P IL
Sbjct: 220 KYLQGLDIKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPEIL 279

Query: 109 SYSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKDG 168
              V   + PL+ + + LG+P     ++I   P ++ + ++  +   V  L    + ++ 
Sbjct: 280 GMRVARIIKPLVEYLEVLGIPRLAAARLIEKRPHILGFELDDTVKPNVQILQDFNV-RET 339

Query: 169 MIGKVLAKNPFLIGYSVHKRLRPTFEFL-KSIGLSEMDLQAVALKFPDILCRDVDKVLRP 228
            +  ++A+ P +IG  +  +L    + L  +I L+  DL ++  + P  +      +L+ 
Sbjct: 340 SLPSIIAQYPEIIGIDLKPKLDTQRKLLCSAIHLNPEDLGSLIERMPQFVSLSESPMLK- 399

Query: 229 NLDYLRRSGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFK 288
           ++D+L + GF   +   +V G P +L  ++   ++    +  + M R L ++ ++P FF 
Sbjct: 400 HIDFLTKCGFSIDQTREMVIGCPQVLALNL-GIMKLSFEYFQKEMKRPLQDLVDFPAFFT 459

Query: 289 HGLKKRLELRHRLLKEKTTDFTLSELLECNQKKFMMKMS 327
           +GL+  ++ RH+ + +K    +L+ +L C+ +KF  +MS
Sbjct: 460 YGLESTVKPRHKKIIKKGIKCSLAWMLNCSDEKFEQRMS 495

[Close]
BLAST of Cp4.1LG15g06740 vs. TrEMBL
Match: A0A0A0K108_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G029940 PE=4 SV=1)

HSP 1 Score: 585.1 bits (1507), Expect = 5.3e-164
Identity = 294/328 (89.63%), Postives = 307/328 (93.60%), Query Frame = 1 

Query: 1   MEISGSRNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60
           ME S SRNG  MLWFFRDKGFDD SIDKMF+KCRRLE MQNERA+ENWEYLE IGIQKRK
Sbjct: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60

Query: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKIL LGLQEK+ PMVECLATLSTKP EIA AIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKDGMIGKVLAKNPFL 180
           AFFQALGVPEKQLGKMILLNPRLISYSIESKL+ETVDFLAGVGLTK+G+IGKVLAKNPFL
Sbjct: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180

Query: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRSGFKDG 240
           +GYSV KRLRPT EFLKSIGL++MDLQAVALKFPDILCRDVDKVLR NLDYLR  GFKDG
Sbjct: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRL 300
           EIVSLVTGYPP+LIKSIQHSLEPRIRFLVEIMGR L+EVAEYP+FFKHGLKK+LELRHRL
Sbjct: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300

Query: 301 LKEKTTDFTLSELLECNQKKFMMKMSLL 329
           LKEK  DF LSELLECNQKKFMMKM LL
Sbjct: 301 LKEKNVDFALSELLECNQKKFMMKMGLL 328

[Close]
BLAST of Cp4.1LG15g06740 vs. TrEMBL
Match: A0A0B0PSD9_GOSAR (mTERF domain-containing 1, mitochondrial OS=Gossypium arboreum GN=F383_08997 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 2.9e-138
Identity = 238/327 (72.78%), Postives = 292/327 (89.30%), Query Frame = 1 

Query: 1   MEISGSRNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60
           M+++  +NG S++WFFRDKGFDD SI++MFKKC+RL+G+  ERA+ENW YL+ IGIQ+RK
Sbjct: 1   MDVTSCQNGGSIMWFFRDKGFDDKSINEMFKKCKRLQGVHKERASENWSYLKSIGIQERK 60

Query: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKIL LGL EK+ PMVECLATL TK RE+A+AIA+FP I+S+SVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILALGLYEKLVPMVECLATLGTKRREVASAIARFPQIVSHSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKDGMIGKVLAKNPFL 180
           AFFQALGV E+QLGKMILLNPRLISYSIESKL + V+FLA +GLT++GMIGKVLAK PF+
Sbjct: 121 AFFQALGVSERQLGKMILLNPRLISYSIESKLTDIVNFLATLGLTREGMIGKVLAKYPFI 180

Query: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRSGFKDG 240
           +GY+V+KRLRPT EFLKS+GLS+ DLQ V + FP++LCRDVDK+LRPN  YL+RSGF+D 
Sbjct: 181 MGYNVNKRLRPTTEFLKSVGLSKTDLQIVTMNFPEVLCRDVDKILRPNFAYLKRSGFEDR 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRL 300
           +I +LVTGYPPILIKSI++SLEPRI+FLVE+MGR +DEVA YP+FF+HGLKKR+ELRHRL
Sbjct: 241 QIAALVTGYPPILIKSIKNSLEPRIKFLVEVMGRQIDEVANYPDFFRHGLKKRVELRHRL 300

Query: 301 LKEKTTDFTLSELLECNQKKFMMKMSL 328
           LKEK  + +LSE+L+CNQKKF++K  L
Sbjct: 301 LKEKDVNCSLSEMLDCNQKKFLLKFGL 327

[Close]
BLAST of Cp4.1LG15g06740 vs. TrEMBL
Match: A0A061E9I9_THECC (Mitochondrial transcription termination factor family protein OS=Theobroma cacao GN=TCM_007613 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 2.9e-138
Identity = 241/327 (73.70%), Postives = 287/327 (87.77%), Query Frame = 1 

Query: 1   MEISGSRNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60
           ME++ S+NG+S++WFFRDKGFDD SI++MF+KC+RL+G+Q ERA+ENW YL+ IGIQ+RK
Sbjct: 1   MEVASSQNGSSIMWFFRDKGFDDKSINEMFRKCKRLQGVQKERASENWAYLKSIGIQERK 60

Query: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL 120
           LPSVVS+CPKIL LGL EK+ PMVECLATL TK  E+A+AIA+FP I+S+SVEEKLCPLL
Sbjct: 61  LPSVVSRCPKILTLGLNEKLVPMVECLATLGTKRHEVASAIARFPHIISHSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKDGMIGKVLAKNPFL 180
           AFFQALGVPEKQLGKMILLNPRLISYSIESKL E VDFLA +GLT++GMIGKVL+K PF+
Sbjct: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLTEIVDFLATLGLTREGMIGKVLSKYPFI 180

Query: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRSGFKDG 240
           +GYSV KRLRPT EFLKS+GLSE DLQ VA+ FP++LCRDV K+LRPN  YL R GF D 
Sbjct: 181 MGYSVDKRLRPTSEFLKSVGLSETDLQTVAMNFPEVLCRDVRKILRPNFAYLERCGFGDR 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRL 300
           E  +LV GYPPILIKSI++SLEPRIRFLVE+MGR ++EVA YP+FF+HGLKKRLELRHRL
Sbjct: 241 EKAALVAGYPPILIKSIKNSLEPRIRFLVEVMGRQIEEVANYPDFFRHGLKKRLELRHRL 300

Query: 301 LKEKTTDFTLSELLECNQKKFMMKMSL 328
           LKEK    +LSE+L+CN KKF++K  L
Sbjct: 301 LKEKDVTCSLSEMLDCNHKKFLLKFGL 327

[Close]
BLAST of Cp4.1LG15g06740 vs. TrEMBL
Match: M5W6R0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008508mg PE=4 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 1.2e-136
Identity = 237/329 (72.04%), Postives = 287/329 (87.23%), Query Frame = 1 

Query: 1   MEISGSRNG-TSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKR 60
           ME S ++NG TS++WFFRDKGFDD SI  M KKC+RLE +  E A+ENW YL+ IGIQ+R
Sbjct: 1   METSTTQNGSTSIMWFFRDKGFDDKSIQDMLKKCKRLENVHGETASENWAYLKSIGIQER 60

Query: 61  KLPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPL 120
           KLPSVVSKCPKIL L L EK+ P VECL TL TKPR++A+AIAKFP ILS+SVEEKLCPL
Sbjct: 61  KLPSVVSKCPKILTLALHEKLVPTVECLTTLGTKPRDVASAIAKFPHILSHSVEEKLCPL 120

Query: 121 LAFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKDGMIGKVLAKNPF 180
           LAFF+ALG+P+KQLGKMILLNPRLISYSIE+KL E V+FLA +GL+++GMIGKVL KNPF
Sbjct: 121 LAFFEALGIPQKQLGKMILLNPRLISYSIEAKLSEIVNFLANLGLSREGMIGKVLVKNPF 180

Query: 181 LIGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRSGFKD 240
           ++GYSV KRLRPT EFLKS+GL+E  LQ VA+ FP++LCRDVDK+LRPN DYL+RSGF+D
Sbjct: 181 IMGYSVEKRLRPTAEFLKSVGLTEQGLQTVAMSFPEVLCRDVDKILRPNFDYLKRSGFED 240

Query: 241 GEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHR 300
           G+I +LV+GYPPILIKSI +SLEPRIRFLVE+MGR +DEVA+YP+FF+HGLKKR+E RH+
Sbjct: 241 GQIAALVSGYPPILIKSIHNSLEPRIRFLVEVMGRQIDEVADYPDFFRHGLKKRVERRHK 300

Query: 301 LLKEKTTDFTLSELLECNQKKFMMKMSLL 329
           LLK++TT  +LSE+L+CNQKKF  K  L+
Sbjct: 301 LLKQRTTHCSLSEMLDCNQKKFATKFGLV 329

[Close]
BLAST of Cp4.1LG15g06740 vs. TrEMBL
Match: A0A0D2VA23_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G065400 PE=4 SV=1)

HSP 1 Score: 493.8 bits (1270), Expect = 1.6e-136
Identity = 236/327 (72.17%), Postives = 289/327 (88.38%), Query Frame = 1 

Query: 1   MEISGSRNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60
           M+++  +NG S++WFFRDKGFDD SI++MFKKC+RL+G+  ERA+ENW YL+ IGIQ+RK
Sbjct: 1   MDVTSCQNGGSIMWFFRDKGFDDKSINEMFKKCKRLQGVHKERASENWSYLKSIGIQERK 60

Query: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKIL LGL EK+ PMVECLATL T+ RE+A+AIA+FP I+S+SVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILALGLYEKLVPMVECLATLGTERREVASAIARFPQIVSHSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKDGMIGKVLAKNPFL 180
           AFFQALGV E+QLGKMILLNPRLISYSIESKL + V+FLA +GLT++ MIGKVLAK PF+
Sbjct: 121 AFFQALGVSERQLGKMILLNPRLISYSIESKLTDIVNFLATLGLTREWMIGKVLAKYPFI 180

Query: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRSGFKDG 240
           +GYSV+KRLRPT EFLKS+GLS+ DLQ V + FP++LCRDVDK+LRPN  YL RSGF+D 
Sbjct: 181 MGYSVNKRLRPTTEFLKSVGLSKTDLQTVTMNFPEVLCRDVDKILRPNFAYLERSGFEDR 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRL 300
           +I +LVTGYPPILIKSI++SLEPRI+FLVE+MGR +DEVA YP+FF+HGLKKR+ELRHRL
Sbjct: 241 QIAALVTGYPPILIKSIKNSLEPRIKFLVEVMGRQIDEVANYPDFFRHGLKKRVELRHRL 300

Query: 301 LKEKTTDFTLSELLECNQKKFMMKMSL 328
           LKEK  + +LSE+L+CN KKF++K  L
Sbjct: 301 LKEKDVNCSLSEMLDCNHKKFLLKFGL 327

[Close]
BLAST of Cp4.1LG15g06740 vs. TAIR10
Match: AT4G38160.3 (AT4G38160.3 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 431.4 bits (1108), Expect = 4.9e-121
Identity = 210/319 (65.83%), Postives = 263/319 (82.45%), Query Frame = 1 

Query: 8   NGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGI-GIQKRKLPSVVS 67
           N +S++WFFRDKGFDD SIDKM +KC++LE  Q++ A+ENW+YL  I GIQ+RKLP +VS
Sbjct: 5   NTSSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVS 64

Query: 68  KCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLLAFFQAL 127
           +CPKIL L L E++ PMVECL++L   PRE+A+AI KFP ILS+SVEEKLCPLLAFFQAL
Sbjct: 65  RCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQAL 124

Query: 128 GVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKDGMIGKVLAKNPFLIGYSVH 187
           GVPE QLGKMIL NPRLISYSI++KL   V FLA +GL +DGMIGKVL KNPFL+GYSV 
Sbjct: 125 GVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVD 184

Query: 188 KRLRPTFEFLK-SIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRSGFKDGEIVSL 247
           KRLRPT EFLK S+GLSE  +++V + FP +LCRDV+K+L+PN DYL+  GF D +I ++
Sbjct: 185 KRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATM 244

Query: 248 VTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRLLKEKT 307
           VTGYP ILIKS+++SL+PRIRFLV++MGR +DEVA YPEFF HGLKK++E R +L+K+  
Sbjct: 245 VTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNN 304

Query: 308 TDFTLSELLECNQKKFMMK 325
            D +L E+L+CN KKF  K
Sbjct: 305 IDCSLREMLDCNTKKFHEK 323

[Close]
BLAST of Cp4.1LG15g06740 vs. TAIR10
Match: AT1G78930.1 (AT1G78930.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 133.3 bits (334), Expect = 2.8e-31
Identity = 83/271 (30.63%), Postives = 143/271 (52.77%), Query Frame = 1 

Query: 51  LEGIGIQKRKLPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSY 110
           +E + +  +    ++ K P IL   +QE  + +     + S    +I  AI ++P +L  
Sbjct: 307 MEKVSVVNKDSGKLLLKYPWILSPSIQENYSHIGSFFYSESVLKMDIDHAIRRWPLLLGC 366

Query: 111 SVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKDGMI 170
           S    +  ++  F  LGV +K++GK+I   P+L+    + + ++ V FL  +G  K+ ++
Sbjct: 367 SASN-MEMMVKEFDKLGVRDKRMGKVIPKMPQLLLCKPQ-EFLKVVCFLEDLGFQKE-IV 426

Query: 171 GKVLAKNPFLIGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLD 230
           G++L + P + G S+ K L+    FL   G+S      +  K+P+ L  D DK + P L 
Sbjct: 427 GQILCRCPEIFGCSIEKTLQKKLIFLTRFGVSTTHFPRIIKKYPEFLIYDADKTVLPRLK 486

Query: 231 YLRRSGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGL 290
           YL   G  + EI  ++  + PIL  SI   L P+  FLV  M + + EV EYP +F + L
Sbjct: 487 YLMEIGISEREIAFMIRKFSPILGYSIDKVLRPKFEFLVNSMEKPVREVIEYPRYFSYSL 546

Query: 291 KKRLELRHRLLKEKTTDFTLSELLECNQKKF 322
           +KR++ R R+LK +  + TL E+L  N ++F
Sbjct: 547 EKRIKPRFRVLKGRNIECTLQEMLGKNDEEF 574

[Close]
BLAST of Cp4.1LG15g06740 vs. TAIR10
Match: AT4G14605.1 (AT4G14605.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 126.7 bits (317), Expect = 2.6e-29
Identity = 79/283 (27.92%), Postives = 148/283 (52.30%), Query Frame = 1 

Query: 50  YLEGIGIQKRKLPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILS 109
           YL  +G+   ++ ++  K        L  KI P+VE L  L     +I T + K P I  
Sbjct: 202 YLLDLGLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICG 261

Query: 110 YSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKDGM 169
            S+ + L P +AF + LG+ + Q  K+I   P +++YS   KL  TV+FL+  GLT++  
Sbjct: 262 ISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILTYS-RQKLTSTVEFLSQTGLTEE-Q 321

Query: 170 IGKVLAKNPFLIGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNL 229
           IG++L + P ++ YSV  +LRPT E+ +S+    +D+  +  + P      ++  L+P  
Sbjct: 322 IGRILTRCPNIMSYSVEDKLRPTMEYFRSL---NVDVAVLLHRCPQTFGLSIESNLKPVT 381

Query: 230 DYLRRSGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHG 289
           ++    GF   EI  +++ Y  +   S++ ++ P+  +  + M     E+ ++P+FF + 
Sbjct: 382 EFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYF-QTMDYPKSELVKFPQFFGYS 441

Query: 290 LKKRLELRHRLLKEKTTDFTLSELLECN-------QKKFMMKM 326
           L++R++ R+ L++       L+++L  +        KK MMK+
Sbjct: 442 LQERIKPRYELVQRSGVRLLLNQVLSLSGIEFEKVVKKKMMKL 478

[Close]
BLAST of Cp4.1LG15g06740 vs. TAIR10
Match: AT2G21710.1 (AT2G21710.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 124.8 bits (312), Expect = 9.9e-29
Identity = 73/291 (25.09%), Postives = 146/291 (50.17%), Query Frame = 1 

Query: 32  KCRRLEGMQNERAAENWEYLEGIGIQKRKLPSVVSKCPKILVLGLQEKIAPMVECLATLS 91
           +C  L     E      ++   +G+ +    ++V   PKI+     + +   +  L    
Sbjct: 304 RCPELLSFSMEEVKSRVDFFLKMGMNQNDFGTMVYDYPKIIGFFSFQVMEKKINYLKEFG 363

Query: 92  TKPREIATAIAKFPGILSYSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESK 151
               E+   +A  P ++  S+EE+  PL+ +F  LG+P++ + +++++ P L    +E  
Sbjct: 364 LSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKT 423

Query: 152 LIETVDFLAGVGLTKDGMIGKVLAKNPFLIGYSVHKRLRPTFEFLKS-IGLSEMDLQAVA 211
           +   V FL  +G+  +  IG +L K P L+  S++K++RP   FL +  G+++ D+  V 
Sbjct: 424 IAPKVRFLQEMGIPNEA-IGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVI 483

Query: 212 LKFPDILCRDVDKVLRPNLDYLRRSGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVE 271
              P +L   +   L PN+ Y    G +  ++  ++  +P +L  ++  +L P+ R+L  
Sbjct: 484 AMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVD-NLRPKYRYLRR 543

Query: 272 IMGRTLDEVAEYPEFFKHGLKKRLELRHRLLKEKTTDFTLSELLECNQKKF 322
            M R L ++ E+P FF + L++R+  RH ++ E   +F L  +L C  ++F
Sbjct: 544 TMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENRVNFKLRYMLACTDEEF 592

[Close]
BLAST of Cp4.1LG15g06740 vs. TAIR10
Match: AT2G44020.1 (AT2G44020.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 111.3 bits (277), Expect = 1.1e-24
Identity = 66/274 (24.09%), Postives = 144/274 (52.55%), Query Frame = 1 

Query: 49  EYLEGIGIQKRKLPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGIL 108
           ++L G+ ++K+ L  V+ K P++L   L+  ++  V  L ++   PR+I   + ++P +L
Sbjct: 185 KFLRGLDVEKQDLGYVLMKYPELLGFKLEGTMSTSVAYLVSIGVSPRDIGPMVTQYPYLL 244

Query: 109 SYSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKDG 168
              V   + PL+ +  ++G+P+K + +M+     ++ Y++E  +   VD L   G+ K+ 
Sbjct: 245 GMRVGTMIKPLVDYLISIGLPKKIVARMLEKRSYIVGYNLEETVKPNVDCLISFGVKKE- 304

Query: 169 MIGKVLAKNPFLIGYSVHKRL-RPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRP 228
           ++  ++A+ P ++G  V  ++    + F   + +       V  K P I+    + +++P
Sbjct: 305 LLPLLIAQYPQILGLPVKAKMSTQQYFFSLKLKIDPEGFARVVEKMPQIVSLKQNVIMKP 364

Query: 229 NLDYLRRSGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFK 288
            +++L    F+  +I  +V   P IL   ++  ++    F    MGR + E+ EYPE+F 
Sbjct: 365 -IEFLLGRAFQVEDIAKMVVRCPQILCSRVE-LMKNSYYFYKTEMGRPMKELVEYPEYFT 424

Query: 289 HGLKKRLELRHRLLKEKTTDFTLSELLECNQKKF 322
           + L+ R++ R++ L+ K    +L+  L C+ ++F
Sbjct: 425 YSLESRIKPRYQKLQSKGIRSSLNWFLNCSDQRF 455

[Close]
BLAST of Cp4.1LG15g06740 vs. NCBI nr
Match: gi|449453646|ref|XP_004144567.1| (PREDICTED: uncharacterized protein LOC101218706 [Cucumis sativus])

HSP 1 Score: 585.1 bits (1507), Expect = 7.6e-164
Identity = 294/328 (89.63%), Postives = 307/328 (93.60%), Query Frame = 1 

Query: 1   MEISGSRNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60
           ME S SRNG  MLWFFRDKGFDD SIDKMF+KCRRLE MQNERA+ENWEYLE IGIQKRK
Sbjct: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60

Query: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKIL LGLQEK+ PMVECLATLSTKP EIA AIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKDGMIGKVLAKNPFL 180
           AFFQALGVPEKQLGKMILLNPRLISYSIESKL+ETVDFLAGVGLTK+G+IGKVLAKNPFL
Sbjct: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180

Query: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRSGFKDG 240
           +GYSV KRLRPT EFLKSIGL++MDLQAVALKFPDILCRDVDKVLR NLDYLR  GFKDG
Sbjct: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRL 300
           EIVSLVTGYPP+LIKSIQHSLEPRIRFLVEIMGR L+EVAEYP+FFKHGLKK+LELRHRL
Sbjct: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300

Query: 301 LKEKTTDFTLSELLECNQKKFMMKMSLL 329
           LKEK  DF LSELLECNQKKFMMKM LL
Sbjct: 301 LKEKNVDFALSELLECNQKKFMMKMGLL 328

[Close]
BLAST of Cp4.1LG15g06740 vs. NCBI nr
Match: gi|659100596|ref|XP_008451174.1| (PREDICTED: mTERF domain-containing protein 1, mitochondrial [Cucumis melo])

HSP 1 Score: 582.8 bits (1501), Expect = 3.8e-163
Identity = 292/328 (89.02%), Postives = 306/328 (93.29%), Query Frame = 1 

Query: 1   MEISGSRNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60
           ME S S+NG  MLWFFRDKGFDD SIDKMF+KCRRLE  QNERA+ENWEYLE IGIQKRK
Sbjct: 1   MESSASQNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDTQNERASENWEYLERIGIQKRK 60

Query: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKIL LGLQEK+ PMVECLATLSTKP EIA AIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKDGMIGKVLAKNPFL 180
           AFFQALGVPEK LGKMILLNPRLISYSIESKL+ETVDFLAGVGLTK+G+IGKVLAKNPFL
Sbjct: 121 AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180

Query: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRSGFKDG 240
           +GYSV KRLRPT EFLKSIGL++MDLQAVALKFPDILCRDVDKVLR NLDYLR  GFKDG
Sbjct: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRSNLDYLRSRGFKDG 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRL 300
           EIVS+VTGYPP+LIKSIQHSLEPRIRFLVEIMGR LDEVAEYP+FFKHGLKK+LELRHRL
Sbjct: 241 EIVSMVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPDFFKHGLKKKLELRHRL 300

Query: 301 LKEKTTDFTLSELLECNQKKFMMKMSLL 329
           LKEK  DFTLSELLECNQKKFMMKM LL
Sbjct: 301 LKEKNVDFTLSELLECNQKKFMMKMGLL 328

[Close]
BLAST of Cp4.1LG15g06740 vs. NCBI nr
Match: gi|728847896|gb|KHG27339.1| (mTERF domain-containing 1, mitochondrial [Gossypium arboreum])

HSP 1 Score: 499.6 bits (1285), Expect = 4.2e-138
Identity = 238/327 (72.78%), Postives = 292/327 (89.30%), Query Frame = 1 

Query: 1   MEISGSRNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60
           M+++  +NG S++WFFRDKGFDD SI++MFKKC+RL+G+  ERA+ENW YL+ IGIQ+RK
Sbjct: 1   MDVTSCQNGGSIMWFFRDKGFDDKSINEMFKKCKRLQGVHKERASENWSYLKSIGIQERK 60

Query: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKIL LGL EK+ PMVECLATL TK RE+A+AIA+FP I+S+SVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILALGLYEKLVPMVECLATLGTKRREVASAIARFPQIVSHSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKDGMIGKVLAKNPFL 180
           AFFQALGV E+QLGKMILLNPRLISYSIESKL + V+FLA +GLT++GMIGKVLAK PF+
Sbjct: 121 AFFQALGVSERQLGKMILLNPRLISYSIESKLTDIVNFLATLGLTREGMIGKVLAKYPFI 180

Query: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRSGFKDG 240
           +GY+V+KRLRPT EFLKS+GLS+ DLQ V + FP++LCRDVDK+LRPN  YL+RSGF+D 
Sbjct: 181 MGYNVNKRLRPTTEFLKSVGLSKTDLQIVTMNFPEVLCRDVDKILRPNFAYLKRSGFEDR 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRL 300
           +I +LVTGYPPILIKSI++SLEPRI+FLVE+MGR +DEVA YP+FF+HGLKKR+ELRHRL
Sbjct: 241 QIAALVTGYPPILIKSIKNSLEPRIKFLVEVMGRQIDEVANYPDFFRHGLKKRVELRHRL 300

Query: 301 LKEKTTDFTLSELLECNQKKFMMKMSL 328
           LKEK  + +LSE+L+CNQKKF++K  L
Sbjct: 301 LKEKDVNCSLSEMLDCNQKKFLLKFGL 327

[Close]
BLAST of Cp4.1LG15g06740 vs. NCBI nr
Match: gi|590689062|ref|XP_007043122.1| (Mitochondrial transcription termination factor family protein [Theobroma cacao])

HSP 1 Score: 499.6 bits (1285), Expect = 4.2e-138
Identity = 241/327 (73.70%), Postives = 287/327 (87.77%), Query Frame = 1 

Query: 1   MEISGSRNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60
           ME++ S+NG+S++WFFRDKGFDD SI++MF+KC+RL+G+Q ERA+ENW YL+ IGIQ+RK
Sbjct: 1   MEVASSQNGSSIMWFFRDKGFDDKSINEMFRKCKRLQGVQKERASENWAYLKSIGIQERK 60

Query: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL 120
           LPSVVS+CPKIL LGL EK+ PMVECLATL TK  E+A+AIA+FP I+S+SVEEKLCPLL
Sbjct: 61  LPSVVSRCPKILTLGLNEKLVPMVECLATLGTKRHEVASAIARFPHIISHSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKDGMIGKVLAKNPFL 180
           AFFQALGVPEKQLGKMILLNPRLISYSIESKL E VDFLA +GLT++GMIGKVL+K PF+
Sbjct: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLTEIVDFLATLGLTREGMIGKVLSKYPFI 180

Query: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRSGFKDG 240
           +GYSV KRLRPT EFLKS+GLSE DLQ VA+ FP++LCRDV K+LRPN  YL R GF D 
Sbjct: 181 MGYSVDKRLRPTSEFLKSVGLSETDLQTVAMNFPEVLCRDVRKILRPNFAYLERCGFGDR 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRL 300
           E  +LV GYPPILIKSI++SLEPRIRFLVE+MGR ++EVA YP+FF+HGLKKRLELRHRL
Sbjct: 241 EKAALVAGYPPILIKSIKNSLEPRIRFLVEVMGRQIEEVANYPDFFRHGLKKRLELRHRL 300

Query: 301 LKEKTTDFTLSELLECNQKKFMMKMSL 328
           LKEK    +LSE+L+CN KKF++K  L
Sbjct: 301 LKEKDVTCSLSEMLDCNHKKFLLKFGL 327

[Close]
BLAST of Cp4.1LG15g06740 vs. NCBI nr
Match: gi|470107525|ref|XP_004290095.1| (PREDICTED: uncharacterized protein LOC101310477 [Fragaria vesca subsp. vesca])

HSP 1 Score: 499.2 bits (1284), Expect = 5.5e-138
Identity = 241/329 (73.25%), Postives = 290/329 (88.15%), Query Frame = 1 

Query: 1   MEISGSRNGTS-MLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKR 60
           ME S ++NG+S ++WFFRDKGFDD SI +MFKKC+RLE M  E A+ENW YLE IGIQ+R
Sbjct: 1   METSTTQNGSSGIMWFFRDKGFDDKSISEMFKKCKRLENMNRESASENWAYLESIGIQER 60

Query: 61  KLPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPL 120
           KLPSVVSKCPKIL LGL EK+ P VECLATL TKPRE+A+AIAKFP ILS+SVEEKLCPL
Sbjct: 61  KLPSVVSKCPKILTLGLHEKLVPTVECLATLGTKPREVASAIAKFPHILSHSVEEKLCPL 120

Query: 121 LAFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKDGMIGKVLAKNPF 180
           LAFF+ALGVP+KQLGKMILLNPRLISYSI++KL + VDFLA +GL +DGMIGKVL KNPF
Sbjct: 121 LAFFEALGVPQKQLGKMILLNPRLISYSIDTKLKDIVDFLADLGLARDGMIGKVLVKNPF 180

Query: 181 LIGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRSGFKD 240
           ++GYSV KRLRPT EFLKS GL+E  +Q VA+ FP++LCRDVDK+LRPN D+L+RSGF+D
Sbjct: 181 IMGYSVDKRLRPTAEFLKSFGLTEQGIQTVAIHFPEVLCRDVDKILRPNFDFLKRSGFED 240

Query: 241 GEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHR 300
           G+I +LVTGYPPILIKSI +SLEPRI+FLVE+MGR +DEV +YP+FF+HGLKK++E RH+
Sbjct: 241 GQIAALVTGYPPILIKSIHNSLEPRIKFLVEVMGRRIDEVTDYPDFFRHGLKKKVERRHK 300

Query: 301 LLKEK-TTDFTLSELLECNQKKFMMKMSL 328
           LLK+K TTD +LSE+L+CNQKKF++K  L
Sbjct: 301 LLKQKTTTDCSLSEMLDCNQKKFLLKFGL 329

The following BLAST results are available for this feature:
BLAST of Cp4.1LG15g06740 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MTEF6_ARATH8.8e-12065.83Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop... [more]
MTEF5_ARATH4.6e-2827.92Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana G... [more]
MTEF2_ARATH1.8e-2725.09Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana G... [more]
MTEF9_ARATH7.6e-2326.32Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana G... [more]
MTEF4_ARATH1.7e-2223.30Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana G... [more]
BLAST of Cp4.1LG15g06740 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K108_CUCSA5.3e-16489.63Uncharacterized protein OS=Cucumis sativus GN=Csa_7G029940 PE=4 SV=1[more]
A0A0B0PSD9_GOSAR2.9e-13872.78mTERF domain-containing 1, mitochondrial OS=Gossypium arboreum GN=F383_08997 PE=... [more]
A0A061E9I9_THECC2.9e-13873.70Mitochondrial transcription termination factor family protein OS=Theobroma cacao... [more]
M5W6R0_PRUPE1.2e-13672.04Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008508mg PE=4 SV=1[more]
A0A0D2VA23_GOSRA1.6e-13672.17Uncharacterized protein OS=Gossypium raimondii GN=B456_013G065400 PE=4 SV=1[more]
BLAST of Cp4.1LG15g06740 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G38160.34.9e-12165.83 Mitochondrial transcription termination factor family protein[more]
AT1G78930.12.8e-3130.63 Mitochondrial transcription termination factor family protein[more]
AT4G14605.12.6e-2927.92 Mitochondrial transcription termination factor family protein[more]
AT2G21710.19.9e-2925.09 Mitochondrial transcription termination factor family protein[more]
AT2G44020.11.1e-2424.09 Mitochondrial transcription termination factor family protein[more]
BLAST of Cp4.1LG15g06740 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449453646|ref|XP_004144567.1|7.6e-16489.63PREDICTED: uncharacterized protein LOC101218706 [Cucumis sativus][more]
gi|659100596|ref|XP_008451174.1|3.8e-16389.02PREDICTED: mTERF domain-containing protein 1, mitochondrial [Cucumis melo][more]
gi|728847896|gb|KHG27339.1|4.2e-13872.78mTERF domain-containing 1, mitochondrial [Gossypium arboreum][more]
gi|590689062|ref|XP_007043122.1|4.2e-13873.70Mitochondrial transcription termination factor family protein [Theobroma cacao][more]
gi|470107525|ref|XP_004290095.1|5.5e-13873.25PREDICTED: uncharacterized protein LOC101310477 [Fragaria vesca subsp. vesca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003690double-stranded DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005575 cellular_component
molecular_function GO:0003690 double-stranded DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g06740.1Cp4.1LG15g06740.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 15..321
score: 1.9
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 276..307
score: 250.0coord: 171..202
score: 1.6E-7coord: 27..57
score: 390.0coord: 243..275
score: 0.12coord: 62..93
score: 20.0coord: 134..165
score: 3.1E-4coord: 207..238
score: 0.21coord: 98..129
score: 5.
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 1..328
score: 9.3E
NoneNo IPR availablePANTHERPTHR13068:SF5MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEINcoord: 1..328
score: 9.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG15g06740Cucsa.100000Cucumber (Gy14) v1cgycpeB0206
Cp4.1LG15g06740Cucsa.120010Cucumber (Gy14) v1cgycpeB0287
Cp4.1LG15g06740CmaCh19G008260Cucurbita maxima (Rimu)cmacpeB522
Cp4.1LG15g06740CmoCh19G008430Cucurbita moschata (Rifu)cmocpeB481
Cp4.1LG15g06740Cla015718Watermelon (97103) v1cpewmB268
Cp4.1LG15g06740Csa7G029940Cucumber (Chinese Long) v2cpecuB257
Cp4.1LG15g06740Csa6G117190Cucumber (Chinese Long) v2cpecuB250
Cp4.1LG15g06740MELO3C015685Melon (DHL92) v3.5.1cpemeB227
Cp4.1LG15g06740ClCG02G010730Watermelon (Charleston Gray)cpewcgB235
Cp4.1LG15g06740ClCG02G003170Watermelon (Charleston Gray)cpewcgB233
Cp4.1LG15g06740CSPI06G09530Wild cucumber (PI 183967)cpecpiB251
Cp4.1LG15g06740CSPI07G02370Wild cucumber (PI 183967)cpecpiB257
Cp4.1LG15g06740Lsi10G000150Bottle gourd (USVL1VR-Ls)cpelsiB194
Cp4.1LG15g06740Lsi11G013180Bottle gourd (USVL1VR-Ls)cpelsiB199
Cp4.1LG15g06740MELO3C015685.2Melon (DHL92) v3.6.1cpemedB265
Cp4.1LG15g06740CsaV3_7G002240Cucumber (Chinese Long) v3cpecucB0322
Cp4.1LG15g06740CsaV3_6G009960Cucumber (Chinese Long) v3cpecucB0316
Cp4.1LG15g06740Bhi10G000989Wax gourdcpewgoB0336
Cp4.1LG15g06740Bhi05G001327Wax gourdcpewgoB0326
Cp4.1LG15g06740CsGy7G002080Cucumber (Gy14) v2cgybcpeB910
Cp4.1LG15g06740CsGy6G009620Cucumber (Gy14) v2cgybcpeB751
Cp4.1LG15g06740Carg04122Silver-seed gourdcarcpeB0281
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG15g06740Cucurbita pepo (Zucchini)cpecpeB280
Cp4.1LG15g06740Cucurbita pepo (Zucchini)cpecpeB255
Cp4.1LG15g06740Cucurbita pepo (Zucchini)cpecpeB267
Cp4.1LG15g06740Cucurbita pepo (Zucchini)cpecpeB272
Cp4.1LG15g06740Cucurbita maxima (Rimu)cmacpeB117
Cp4.1LG15g06740Cucurbita maxima (Rimu)cmacpeB118
Cp4.1LG15g06740Cucurbita maxima (Rimu)cmacpeB560
Cp4.1LG15g06740Cucurbita maxima (Rimu)cmacpeB613
Cp4.1LG15g06740Cucurbita moschata (Rifu)cmocpeB098
Cp4.1LG15g06740Cucurbita moschata (Rifu)cmocpeB093
Cp4.1LG15g06740Cucurbita moschata (Rifu)cmocpeB513
Cp4.1LG15g06740Cucurbita moschata (Rifu)cmocpeB562
Cp4.1LG15g06740Melon (DHL92) v3.5.1cpemeB213
Cp4.1LG15g06740Silver-seed gourdcarcpeB0484
Cp4.1LG15g06740Silver-seed gourdcarcpeB1189
Cp4.1LG15g06740Silver-seed gourdcarcpeB1480
Cp4.1LG15g06740Silver-seed gourdcarcpeB1481