CmaCh19G008260 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh19G008260
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Mitochondrial transcription termination factor family protein
Location	Cma_Chr19 : 7861147 .. 7862100 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGTGGTTCTTCAGGGACAAAGGATTTGATGATGGAAGCATCGATAAGATGTTTAAAAAGTGTAGGCGTTTGGAAGGTATGCAGAATGAAAGAGCTGCTGAAAATTGGGAATATTTGGAAGGAATTGGGATTCAAAAGAGGAAACTCCCTTCTGTTGTTTCCAAATGTCCTAAGATTCTAGTTCTTGGTCTTCAAGAGAAAATTGCTCCCATGGTTGAGTGCCTTGCAACACTCACCACTAAGCCTCGTGAAATTGCTACAGCTATTGCCAAATTTCCTGGCATTCTTTCCTACAGTGTTGAAGAGAAGCTATGCCCACTTTTGGCTTTCTTTCAAGCATTGGGTGTCCCTGAAAAGCAGCTTGGAAAGATGATTCTACTCAACCCGAGGCTTATTAGCTACAGCATTGAATCGAAGCTCATTGAAACTGTGGATTTTCTTGCTGGGGTTGGGCTAACGAAGGAGGGGATGATTGGAAAAGTTCTAGTAAAGAATCCATTTCTCATTGGATATAGTGTTCATAAAAGGCTCCGTCCTACTTTCGAGTTTCTGAAATCGATCGGTCTCAGTGAGATGGATCTTCAAGCAGTTGCATTGAAATTTCCAGACATTTTGTGTAGGGATGTGGACAAAGTTTTGAGACCCAATTTGGATTATCTGAGGAGACGTGGGTTTAAAGATGGAGAAATAGTGTCTTTGGTGACTGGTTATCCTCCTATTTTGATCAAGAGCATTCAACATTCTTTAGAACCTCGGATCAGATTTTTAGTCGAAATAATGGGAAGAACACTTGACGAAGTTGCCGAATATCCCGAGTTTTTTAAGCATGGCTTGAAGAAAAGACTCGAGTTGCGGCATAGATTGTTGAAAGAGAAGACAATGGACTTTACCTTGAGTGAATTGTTGGAATGCAATCAAAAGAAGTTTATGATGAAAATGAGTTTGTTATGA

mRNA sequence

ATGCTGTGGTTCTTCAGGGACAAAGGATTTGATGATGGAAGCATCGATAAGATGTTTAAAAAGTGTAGGCGTTTGGAAGGTATGCAGAATGAAAGAGCTGCTGAAAATTGGGAATATTTGGAAGGAATTGGGATTCAAAAGAGGAAACTCCCTTCTGTTGTTTCCAAATGTCCTAAGATTCTAGTTCTTGGTCTTCAAGAGAAAATTGCTCCCATGGTTGAGTGCCTTGCAACACTCACCACTAAGCCTCGTGAAATTGCTACAGCTATTGCCAAATTTCCTGGCATTCTTTCCTACAGTGTTGAAGAGAAGCTATGCCCACTTTTGGCTTTCTTTCAAGCATTGGGTGTCCCTGAAAAGCAGCTTGGAAAGATGATTCTACTCAACCCGAGGCTTATTAGCTACAGCATTGAATCGAAGCTCATTGAAACTGTGGATTTTCTTGCTGGGGTTGGGCTAACGAAGGAGGGGATGATTGGAAAAGTTCTAGTAAAGAATCCATTTCTCATTGGATATAGTGTTCATAAAAGGCTCCGTCCTACTTTCGAGTTTCTGAAATCGATCGGTCTCAGTGAGATGGATCTTCAAGCAGTTGCATTGAAATTTCCAGACATTTTGTGTAGGGATGTGGACAAAGTTTTGAGACCCAATTTGGATTATCTGAGGAGACGTGGGTTTAAAGATGGAGAAATAGTGTCTTTGGTGACTGGTTATCCTCCTATTTTGATCAAGAGCATTCAACATTCTTTAGAACCTCGGATCAGATTTTTAGTCGAAATAATGGGAAGAACACTTGACGAAGTTGCCGAATATCCCGAGTTTTTTAAGCATGGCTTGAAGAAAAGACTCGAGTTGCGGCATAGATTGTTGAAAGAGAAGACAATGGACTTTACCTTGAGTGAATTGTTGGAATGCAATCAAAAGAAGTTTATGATGAAAATGAGTTTGTTATGA

Coding sequence (CDS)

ATGCTGTGGTTCTTCAGGGACAAAGGATTTGATGATGGAAGCATCGATAAGATGTTTAAAAAGTGTAGGCGTTTGGAAGGTATGCAGAATGAAAGAGCTGCTGAAAATTGGGAATATTTGGAAGGAATTGGGATTCAAAAGAGGAAACTCCCTTCTGTTGTTTCCAAATGTCCTAAGATTCTAGTTCTTGGTCTTCAAGAGAAAATTGCTCCCATGGTTGAGTGCCTTGCAACACTCACCACTAAGCCTCGTGAAATTGCTACAGCTATTGCCAAATTTCCTGGCATTCTTTCCTACAGTGTTGAAGAGAAGCTATGCCCACTTTTGGCTTTCTTTCAAGCATTGGGTGTCCCTGAAAAGCAGCTTGGAAAGATGATTCTACTCAACCCGAGGCTTATTAGCTACAGCATTGAATCGAAGCTCATTGAAACTGTGGATTTTCTTGCTGGGGTTGGGCTAACGAAGGAGGGGATGATTGGAAAAGTTCTAGTAAAGAATCCATTTCTCATTGGATATAGTGTTCATAAAAGGCTCCGTCCTACTTTCGAGTTTCTGAAATCGATCGGTCTCAGTGAGATGGATCTTCAAGCAGTTGCATTGAAATTTCCAGACATTTTGTGTAGGGATGTGGACAAAGTTTTGAGACCCAATTTGGATTATCTGAGGAGACGTGGGTTTAAAGATGGAGAAATAGTGTCTTTGGTGACTGGTTATCCTCCTATTTTGATCAAGAGCATTCAACATTCTTTAGAACCTCGGATCAGATTTTTAGTCGAAATAATGGGAAGAACACTTGACGAAGTTGCCGAATATCCCGAGTTTTTTAAGCATGGCTTGAAGAAAAGACTCGAGTTGCGGCATAGATTGTTGAAAGAGAAGACAATGGACTTTACCTTGAGTGAATTGTTGGAATGCAATCAAAAGAAGTTTATGATGAAAATGAGTTTGTTATGA

Protein sequence

MLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRKLPSVVSKCPKILVLGLQEKIAPMVECLATLTTKPREIATAIAKFPGILSYSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFLIGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRLLKEKTMDFTLSELLECNQKKFMMKMSLL

Homology

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BLAST of CmaCh19G008260 vs. Swiss-Prot
Match: MTEF6_ARATH (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 2.7e-118
Identity = 208/315 (66.03%), Postives = 262/315 (83.17%), Query Frame = 1


Query: 1   MLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGI-GIQKRKLPSVVSKCPK 60
           ++WFFRDKGFDD SIDKM +KC++LE  Q++ A+ENW+YL  I GIQ+RKLP +VS+CPK
Sbjct: 9   IMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVSRCPK 68

Query: 61  ILVLGLQEKIAPMVECLATLTTKPREIATAIAKFPGILSYSVEEKLCPLLAFFQALGVPE 120
           IL L L E++ PMVECL++L   PRE+A+AI KFP ILS+SVEEKLCPLLAFFQALGVPE
Sbjct: 69  ILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQALGVPE 128

Query: 121 KQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFLIGYSVHKRLR 180
            QLGKMIL NPRLISYSI++KL   V FLA +GL ++GMIGKVLVKNPFL+GYSV KRLR
Sbjct: 129 TQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLR 188

Query: 181 PTFEFLK-SIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDGEIVSLVTGY 240
           PT EFLK S+GLSE  +++V + FP +LCRDV+K+L+PN DYL+  GF D +I ++VTGY
Sbjct: 189 PTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATMVTGY 248

Query: 241 PPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRLLKEKTMDFT 300
           P ILIKS+++SL+PRIRFLV++MGR +DEVA YPEFF HGLKK++E R +L+K+  +D +
Sbjct: 249 PQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNNIDCS 308

Query: 301 LSELLECNQKKFMMK 314
           L E+L+CN KKF  K
Sbjct: 309 LREMLDCNTKKFHEK 323

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BLAST of CmaCh19G008260 vs. Swiss-Prot
Match: MTEF5_ARATH (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana GN=MTERF5 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 4.5e-28
Identity = 80/283 (28.27%), Postives = 150/283 (53.00%), Query Frame = 1


Query: 39  YLEGIGIQKRKLPSVVSKCPKILVLGLQEKIAPMVECLATLTTKPREIATAIAKFPGILS 98
           YL  +G+   ++ ++  K        L  KI P+VE L  L     +I T + K P I  
Sbjct: 202 YLLDLGLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICG 261

Query: 99  YSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGM 158
            S+ + L P +AF + LG+ + Q  K+I   P +++YS   KL  TV+FL+  GLT+E  
Sbjct: 262 ISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILTYS-RQKLTSTVEFLSQTGLTEE-Q 321

Query: 159 IGKVLVKNPFLIGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNL 218
           IG++L + P ++ YSV  +LRPT E+ +S+    +D+  +  + P      ++  L+P  
Sbjct: 322 IGRILTRCPNIMSYSVEDKLRPTMEYFRSL---NVDVAVLLHRCPQTFGLSIESNLKPVT 381

Query: 219 DYLRRRGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHG 278
           ++   +GF   EI  +++ Y  +   S++ ++ P+  +  + M     E+ ++P+FF + 
Sbjct: 382 EFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYF-QTMDYPKSELVKFPQFFGYS 441

Query: 279 LKKRLELRHRLLKEKTMDFTLSELLECN-------QKKFMMKM 315
           L++R++ R+ L++   +   L+++L  +        KK MMK+
Sbjct: 442 LQERIKPRYELVQRSGVRLLLNQVLSLSGIEFEKVVKKKMMKL 478

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BLAST of CmaCh19G008260 vs. Swiss-Prot
Match: MTEF2_ARATH (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 5.8e-28
Identity = 75/291 (25.77%), Postives = 148/291 (50.86%), Query Frame = 1


Query: 21  KCRRLEGMQNERAAENWEYLEGIGIQKRKLPSVVSKCPKILVLGLQEKIAPMVECLATLT 80
           +C  L     E      ++   +G+ +    ++V   PKI+     + +   +  L    
Sbjct: 304 RCPELLSFSMEEVKSRVDFFLKMGMNQNDFGTMVYDYPKIIGFFSFQVMEKKINYLKEFG 363

Query: 81  TKPREIATAIAKFPGILSYSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESK 140
               E+   +A  P ++  S+EE+  PL+ +F  LG+P++ + +++++ P L    +E  
Sbjct: 364 LSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKT 423

Query: 141 LIETVDFLAGVGLTKEGMIGKVLVKNPFLIGYSVHKRLRPTFEFLKS-IGLSEMDLQAVA 200
           +   V FL  +G+  E  IG +LVK P L+  S++K++RP   FL +  G+++ D+  V 
Sbjct: 424 IAPKVRFLQEMGIPNEA-IGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVI 483

Query: 201 LKFPDILCRDVDKVLRPNLDYLRRRGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVE 260
              P +L   +   L PN+ Y    G +  ++  ++  +P +L  ++  +L P+ R+L  
Sbjct: 484 AMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVD-NLRPKYRYLRR 543

Query: 261 IMGRTLDEVAEYPEFFKHGLKKRLELRHRLLKEKTMDFTLSELLECNQKKF 311
            M R L ++ E+P FF + L++R+  RH ++ E  ++F L  +L C  ++F
Sbjct: 544 TMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENRVNFKLRYMLACTDEEF 592

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BLAST of CmaCh19G008260 vs. Swiss-Prot
Match: MTEF9_ARATH (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.3e-22
Identity = 67/251 (26.69%), Postives = 128/251 (51.00%), Query Frame = 1


Query: 43  IGIQKRKLPSVVSKCPKILVLGLQEKIAPMVECLATLTTKPREIATAIAKFPGILSYSVE 102
           + + +R +PS+     +I V   QE++    + L ++  K R+I   + + P IL Y+VE
Sbjct: 202 VQMYERHMPSL-----QINVFSAQERL----DYLLSVGVKHRDIKRMLLRQPQILQYTVE 261

Query: 103 EKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKV 162
             L   ++F   LG+P  ++G+++   P L SYS+E+ L  T+ +L      KE  +GKV
Sbjct: 262 NNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPTIRYLIEEVGIKETDVGKV 321

Query: 163 LVKNPFLIGYSVHKRLRPTFEFL-KSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYL 222
           +  +P ++   +       + FL K +G     +  +  K P +L   +D    P +++L
Sbjct: 322 VQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGFLPRINFL 381

Query: 223 RRRGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKK 282
           R  G  + +I+ ++T    +L  S++ +L+P+  +LV  +   +  + +YP +    L +
Sbjct: 382 RSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQ 441

Query: 283 RLELRHRLLKE 293
           R+  RHR L E
Sbjct: 442 RIRPRHRFLVE 443

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BLAST of CmaCh19G008260 vs. Swiss-Prot
Match: MTEF1_ARATH (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 98.2 bits (243), Expect = 1.7e-19
Identity = 57/196 (29.08%), Postives = 108/196 (55.10%), Query Frame = 1


Query: 116 GVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFLIGYSVH 175
           G+    +G+++ + P L++   ES+++  + FL+      E  I K + + P L+  SV 
Sbjct: 76  GLSRPAVGRILDMFPDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVD 135

Query: 176 KRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRR-GFKDGEIVSL 235
            +LRP   FLK++G    D   +  +   +L  +V++ L P ++YL    GF   E+  +
Sbjct: 136 YQLRPALTFLKTLGFVGRD--TITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKM 195

Query: 236 VTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRLLKEKT 295
           V   P +L  S+ ++L P++ F +E M   + E+  +P++F   L+++++ RHRLLKE  
Sbjct: 196 VVRSPALLTYSVDNNLVPKVEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHG 255

Query: 296 MDFTLSELLECNQKKF 311
           +   LSE+L+ +  +F
Sbjct: 256 ILMPLSEMLKVSDGQF 269

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BLAST of CmaCh19G008260 vs. TrEMBL
Match: A0A0A0K108_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G029940 PE=4 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 3.4e-160
Identity = 287/317 (90.54%), Postives = 301/317 (94.95%), Query Frame = 1


Query: 1   MLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRKLPSVVSKCPKI 60
           MLWFFRDKGFDD SIDKMF+KCRRLE MQNERA+ENWEYLE IGIQKRKLPSVVSKCPKI
Sbjct: 12  MLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRKLPSVVSKCPKI 71

Query: 61  LVLGLQEKIAPMVECLATLTTKPREIATAIAKFPGILSYSVEEKLCPLLAFFQALGVPEK 120
           L LGLQEK+ PMVECLATL+TKP EIA AIAKFPGILSYSVEEKLCPLLAFFQALGVPEK
Sbjct: 72  LALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLLAFFQALGVPEK 131

Query: 121 QLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFLIGYSVHKRLRP 180
           QLGKMILLNPRLISYSIESKL+ETVDFLAGVGLTKEG+IGKVL KNPFL+GYSV KRLRP
Sbjct: 132 QLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFLMGYSVDKRLRP 191

Query: 181 TFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDGEIVSLVTGYPP 240
           T EFLKSIGL++MDLQAVALKFPDILCRDVDKVLR NLDYLR RGFKDGEIVSLVTGYPP
Sbjct: 192 TVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDGEIVSLVTGYPP 251

Query: 241 ILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRLLKEKTMDFTLS 300
           +LIKSIQHSLEPRIRFLVEIMGR L+EVAEYP+FFKHGLKK+LELRHRLLKEK +DF LS
Sbjct: 252 VLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRLLKEKNVDFALS 311

Query: 301 ELLECNQKKFMMKMSLL 318
           ELLECNQKKFMMKM LL
Sbjct: 312 ELLECNQKKFMMKMGLL 328

[Close]

BLAST of CmaCh19G008260 vs. TrEMBL
Match: A0A0B0PSD9_GOSAR (mTERF domain-containing 1, mitochondrial OS=Gossypium arboreum GN=F383_08997 PE=4 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 4.2e-134
Identity = 233/316 (73.73%), Postives = 283/316 (89.56%), Query Frame = 1


Query: 1   MLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRKLPSVVSKCPKI 60
           ++WFFRDKGFDD SI++MFKKC+RL+G+  ERA+ENW YL+ IGIQ+RKLPSVVSKCPKI
Sbjct: 12  IMWFFRDKGFDDKSINEMFKKCKRLQGVHKERASENWSYLKSIGIQERKLPSVVSKCPKI 71

Query: 61  LVLGLQEKIAPMVECLATLTTKPREIATAIAKFPGILSYSVEEKLCPLLAFFQALGVPEK 120
           L LGL EK+ PMVECLATL TK RE+A+AIA+FP I+S+SVEEKLCPLLAFFQALGV E+
Sbjct: 72  LALGLYEKLVPMVECLATLGTKRREVASAIARFPQIVSHSVEEKLCPLLAFFQALGVSER 131

Query: 121 QLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFLIGYSVHKRLRP 180
           QLGKMILLNPRLISYSIESKL + V+FLA +GLT+EGMIGKVL K PF++GY+V+KRLRP
Sbjct: 132 QLGKMILLNPRLISYSIESKLTDIVNFLATLGLTREGMIGKVLAKYPFIMGYNVNKRLRP 191

Query: 181 TFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDGEIVSLVTGYPP 240
           T EFLKS+GLS+ DLQ V + FP++LCRDVDK+LRPN  YL+R GF+D +I +LVTGYPP
Sbjct: 192 TTEFLKSVGLSKTDLQIVTMNFPEVLCRDVDKILRPNFAYLKRSGFEDRQIAALVTGYPP 251

Query: 241 ILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRLLKEKTMDFTLS 300
           ILIKSI++SLEPRI+FLVE+MGR +DEVA YP+FF+HGLKKR+ELRHRLLKEK ++ +LS
Sbjct: 252 ILIKSIKNSLEPRIKFLVEVMGRQIDEVANYPDFFRHGLKKRVELRHRLLKEKDVNCSLS 311

Query: 301 ELLECNQKKFMMKMSL 317
           E+L+CNQKKF++K  L
Sbjct: 312 EMLDCNQKKFLLKFGL 327

[Close]

BLAST of CmaCh19G008260 vs. TrEMBL
Match: A0A061E9I9_THECC (Mitochondrial transcription termination factor family protein OS=Theobroma cacao GN=TCM_007613 PE=4 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 2.7e-133
Identity = 236/316 (74.68%), Postives = 277/316 (87.66%), Query Frame = 1


Query: 1   MLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRKLPSVVSKCPKI 60
           ++WFFRDKGFDD SI++MF+KC+RL+G+Q ERA+ENW YL+ IGIQ+RKLPSVVS+CPKI
Sbjct: 12  IMWFFRDKGFDDKSINEMFRKCKRLQGVQKERASENWAYLKSIGIQERKLPSVVSRCPKI 71

Query: 61  LVLGLQEKIAPMVECLATLTTKPREIATAIAKFPGILSYSVEEKLCPLLAFFQALGVPEK 120
           L LGL EK+ PMVECLATL TK  E+A+AIA+FP I+S+SVEEKLCPLLAFFQALGVPEK
Sbjct: 72  LTLGLNEKLVPMVECLATLGTKRHEVASAIARFPHIISHSVEEKLCPLLAFFQALGVPEK 131

Query: 121 QLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFLIGYSVHKRLRP 180
           QLGKMILLNPRLISYSIESKL E VDFLA +GLT+EGMIGKVL K PF++GYSV KRLRP
Sbjct: 132 QLGKMILLNPRLISYSIESKLTEIVDFLATLGLTREGMIGKVLSKYPFIMGYSVDKRLRP 191

Query: 181 TFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDGEIVSLVTGYPP 240
           T EFLKS+GLSE DLQ VA+ FP++LCRDV K+LRPN  YL R GF D E  +LV GYPP
Sbjct: 192 TSEFLKSVGLSETDLQTVAMNFPEVLCRDVRKILRPNFAYLERCGFGDREKAALVAGYPP 251

Query: 241 ILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRLLKEKTMDFTLS 300
           ILIKSI++SLEPRIRFLVE+MGR ++EVA YP+FF+HGLKKRLELRHRLLKEK +  +LS
Sbjct: 252 ILIKSIKNSLEPRIRFLVEVMGRQIEEVANYPDFFRHGLKKRLELRHRLLKEKDVTCSLS 311

Query: 301 ELLECNQKKFMMKMSL 317
           E+L+CN KKF++K  L
Sbjct: 312 EMLDCNHKKFLLKFGL 327

[Close]

BLAST of CmaCh19G008260 vs. TrEMBL
Match: M5W6R0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008508mg PE=4 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 6.1e-133
Identity = 230/317 (72.56%), Postives = 277/317 (87.38%), Query Frame = 1


Query: 1   MLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRKLPSVVSKCPKI 60
           ++WFFRDKGFDD SI  M KKC+RLE +  E A+ENW YL+ IGIQ+RKLPSVVSKCPKI
Sbjct: 13  IMWFFRDKGFDDKSIQDMLKKCKRLENVHGETASENWAYLKSIGIQERKLPSVVSKCPKI 72

Query: 61  LVLGLQEKIAPMVECLATLTTKPREIATAIAKFPGILSYSVEEKLCPLLAFFQALGVPEK 120
           L L L EK+ P VECL TL TKPR++A+AIAKFP ILS+SVEEKLCPLLAFF+ALG+P+K
Sbjct: 73  LTLALHEKLVPTVECLTTLGTKPRDVASAIAKFPHILSHSVEEKLCPLLAFFEALGIPQK 132

Query: 121 QLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFLIGYSVHKRLRP 180
           QLGKMILLNPRLISYSIE+KL E V+FLA +GL++EGMIGKVLVKNPF++GYSV KRLRP
Sbjct: 133 QLGKMILLNPRLISYSIEAKLSEIVNFLANLGLSREGMIGKVLVKNPFIMGYSVEKRLRP 192

Query: 181 TFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDGEIVSLVTGYPP 240
           T EFLKS+GL+E  LQ VA+ FP++LCRDVDK+LRPN DYL+R GF+DG+I +LV+GYPP
Sbjct: 193 TAEFLKSVGLTEQGLQTVAMSFPEVLCRDVDKILRPNFDYLKRSGFEDGQIAALVSGYPP 252

Query: 241 ILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRLLKEKTMDFTLS 300
           ILIKSI +SLEPRIRFLVE+MGR +DEVA+YP+FF+HGLKKR+E RH+LLK++T   +LS
Sbjct: 253 ILIKSIHNSLEPRIRFLVEVMGRQIDEVADYPDFFRHGLKKRVERRHKLLKQRTTHCSLS 312

Query: 301 ELLECNQKKFMMKMSLL 318
           E+L+CNQKKF  K  L+
Sbjct: 313 EMLDCNQKKFATKFGLV 329

[Close]

BLAST of CmaCh19G008260 vs. TrEMBL
Match: A0A0D2VA23_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G065400 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 2.3e-132
Identity = 231/316 (73.10%), Postives = 280/316 (88.61%), Query Frame = 1


Query: 1   MLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRKLPSVVSKCPKI 60
           ++WFFRDKGFDD SI++MFKKC+RL+G+  ERA+ENW YL+ IGIQ+RKLPSVVSKCPKI
Sbjct: 12  IMWFFRDKGFDDKSINEMFKKCKRLQGVHKERASENWSYLKSIGIQERKLPSVVSKCPKI 71

Query: 61  LVLGLQEKIAPMVECLATLTTKPREIATAIAKFPGILSYSVEEKLCPLLAFFQALGVPEK 120
           L LGL EK+ PMVECLATL T+ RE+A+AIA+FP I+S+SVEEKLCPLLAFFQALGV E+
Sbjct: 72  LALGLYEKLVPMVECLATLGTERREVASAIARFPQIVSHSVEEKLCPLLAFFQALGVSER 131

Query: 121 QLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFLIGYSVHKRLRP 180
           QLGKMILLNPRLISYSIESKL + V+FLA +GLT+E MIGKVL K PF++GYSV+KRLRP
Sbjct: 132 QLGKMILLNPRLISYSIESKLTDIVNFLATLGLTREWMIGKVLAKYPFIMGYSVNKRLRP 191

Query: 181 TFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDGEIVSLVTGYPP 240
           T EFLKS+GLS+ DLQ V + FP++LCRDVDK+LRPN  YL R GF+D +I +LVTGYPP
Sbjct: 192 TTEFLKSVGLSKTDLQTVTMNFPEVLCRDVDKILRPNFAYLERSGFEDRQIAALVTGYPP 251

Query: 241 ILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRLLKEKTMDFTLS 300
           ILIKSI++SLEPRI+FLVE+MGR +DEVA YP+FF+HGLKKR+ELRHRLLKEK ++ +LS
Sbjct: 252 ILIKSIKNSLEPRIKFLVEVMGRQIDEVANYPDFFRHGLKKRVELRHRLLKEKDVNCSLS 311

Query: 301 ELLECNQKKFMMKMSL 317
           E+L+CN KKF++K  L
Sbjct: 312 EMLDCNHKKFLLKFGL 327

[Close]

BLAST of CmaCh19G008260 vs. TAIR10
Match: AT4G38160.3 (AT4G38160.3 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 426.4 bits (1095), Expect = 1.5e-119
Identity = 208/315 (66.03%), Postives = 262/315 (83.17%), Query Frame = 1


Query: 1   MLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGI-GIQKRKLPSVVSKCPK 60
           ++WFFRDKGFDD SIDKM +KC++LE  Q++ A+ENW+YL  I GIQ+RKLP +VS+CPK
Sbjct: 9   IMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVSRCPK 68

Query: 61  ILVLGLQEKIAPMVECLATLTTKPREIATAIAKFPGILSYSVEEKLCPLLAFFQALGVPE 120
           IL L L E++ PMVECL++L   PRE+A+AI KFP ILS+SVEEKLCPLLAFFQALGVPE
Sbjct: 69  ILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQALGVPE 128

Query: 121 KQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFLIGYSVHKRLR 180
            QLGKMIL NPRLISYSI++KL   V FLA +GL ++GMIGKVLVKNPFL+GYSV KRLR
Sbjct: 129 TQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLR 188

Query: 181 PTFEFLK-SIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDGEIVSLVTGY 240
           PT EFLK S+GLSE  +++V + FP +LCRDV+K+L+PN DYL+  GF D +I ++VTGY
Sbjct: 189 PTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATMVTGY 248

Query: 241 PPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRLLKEKTMDFT 300
           P ILIKS+++SL+PRIRFLV++MGR +DEVA YPEFF HGLKK++E R +L+K+  +D +
Sbjct: 249 PQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNNIDCS 308

Query: 301 LSELLECNQKKFMMK 314
           L E+L+CN KKF  K
Sbjct: 309 LREMLDCNTKKFHEK 323

[Close]

BLAST of CmaCh19G008260 vs. TAIR10
Match: AT1G78930.1 (AT1G78930.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 132.5 bits (332), Expect = 4.6e-31
Identity = 83/271 (30.63%), Postives = 144/271 (53.14%), Query Frame = 1


Query: 40  LEGIGIQKRKLPSVVSKCPKILVLGLQEKIAPMVECLATLTTKPREIATAIAKFPGILSY 99
           +E + +  +    ++ K P IL   +QE  + +     + +    +I  AI ++P +L  
Sbjct: 307 MEKVSVVNKDSGKLLLKYPWILSPSIQENYSHIGSFFYSESVLKMDIDHAIRRWPLLLGC 366

Query: 100 SVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMI 159
           S    +  ++  F  LGV +K++GK+I   P+L+    + + ++ V FL  +G  KE ++
Sbjct: 367 SASN-MEMMVKEFDKLGVRDKRMGKVIPKMPQLLLCKPQ-EFLKVVCFLEDLGFQKE-IV 426

Query: 160 GKVLVKNPFLIGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLD 219
           G++L + P + G S+ K L+    FL   G+S      +  K+P+ L  D DK + P L 
Sbjct: 427 GQILCRCPEIFGCSIEKTLQKKLIFLTRFGVSTTHFPRIIKKYPEFLIYDADKTVLPRLK 486

Query: 220 YLRRRGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGL 279
           YL   G  + EI  ++  + PIL  SI   L P+  FLV  M + + EV EYP +F + L
Sbjct: 487 YLMEIGISEREIAFMIRKFSPILGYSIDKVLRPKFEFLVNSMEKPVREVIEYPRYFSYSL 546

Query: 280 KKRLELRHRLLKEKTMDFTLSELLECNQKKF 311
           +KR++ R R+LK + ++ TL E+L  N ++F
Sbjct: 547 EKRIKPRFRVLKGRNIECTLQEMLGKNDEEF 574

[Close]

BLAST of CmaCh19G008260 vs. TAIR10
Match: AT4G14605.1 (AT4G14605.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 126.7 bits (317), Expect = 2.5e-29
Identity = 80/283 (28.27%), Postives = 150/283 (53.00%), Query Frame = 1


Query: 39  YLEGIGIQKRKLPSVVSKCPKILVLGLQEKIAPMVECLATLTTKPREIATAIAKFPGILS 98
           YL  +G+   ++ ++  K        L  KI P+VE L  L     +I T + K P I  
Sbjct: 202 YLLDLGLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICG 261

Query: 99  YSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGM 158
            S+ + L P +AF + LG+ + Q  K+I   P +++YS   KL  TV+FL+  GLT+E  
Sbjct: 262 ISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILTYS-RQKLTSTVEFLSQTGLTEE-Q 321

Query: 159 IGKVLVKNPFLIGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNL 218
           IG++L + P ++ YSV  +LRPT E+ +S+    +D+  +  + P      ++  L+P  
Sbjct: 322 IGRILTRCPNIMSYSVEDKLRPTMEYFRSL---NVDVAVLLHRCPQTFGLSIESNLKPVT 381

Query: 219 DYLRRRGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHG 278
           ++   +GF   EI  +++ Y  +   S++ ++ P+  +  + M     E+ ++P+FF + 
Sbjct: 382 EFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYF-QTMDYPKSELVKFPQFFGYS 441

Query: 279 LKKRLELRHRLLKEKTMDFTLSELLECN-------QKKFMMKM 315
           L++R++ R+ L++   +   L+++L  +        KK MMK+
Sbjct: 442 LQERIKPRYELVQRSGVRLLLNQVLSLSGIEFEKVVKKKMMKL 478

[Close]

BLAST of CmaCh19G008260 vs. TAIR10
Match: AT2G21710.1 (AT2G21710.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 126.3 bits (316), Expect = 3.3e-29
Identity = 75/291 (25.77%), Postives = 148/291 (50.86%), Query Frame = 1


Query: 21  KCRRLEGMQNERAAENWEYLEGIGIQKRKLPSVVSKCPKILVLGLQEKIAPMVECLATLT 80
           +C  L     E      ++   +G+ +    ++V   PKI+     + +   +  L    
Sbjct: 304 RCPELLSFSMEEVKSRVDFFLKMGMNQNDFGTMVYDYPKIIGFFSFQVMEKKINYLKEFG 363

Query: 81  TKPREIATAIAKFPGILSYSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESK 140
               E+   +A  P ++  S+EE+  PL+ +F  LG+P++ + +++++ P L    +E  
Sbjct: 364 LSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKT 423

Query: 141 LIETVDFLAGVGLTKEGMIGKVLVKNPFLIGYSVHKRLRPTFEFLKS-IGLSEMDLQAVA 200
           +   V FL  +G+  E  IG +LVK P L+  S++K++RP   FL +  G+++ D+  V 
Sbjct: 424 IAPKVRFLQEMGIPNEA-IGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVI 483

Query: 201 LKFPDILCRDVDKVLRPNLDYLRRRGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVE 260
              P +L   +   L PN+ Y    G +  ++  ++  +P +L  ++  +L P+ R+L  
Sbjct: 484 AMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVD-NLRPKYRYLRR 543

Query: 261 IMGRTLDEVAEYPEFFKHGLKKRLELRHRLLKEKTMDFTLSELLECNQKKF 311
            M R L ++ E+P FF + L++R+  RH ++ E  ++F L  +L C  ++F
Sbjct: 544 TMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENRVNFKLRYMLACTDEEF 592

[Close]

BLAST of CmaCh19G008260 vs. TAIR10
Match: AT2G44020.1 (AT2G44020.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 112.1 bits (279), Expect = 6.4e-25
Identity = 67/274 (24.45%), Postives = 145/274 (52.92%), Query Frame = 1


Query: 38  EYLEGIGIQKRKLPSVVSKCPKILVLGLQEKIAPMVECLATLTTKPREIATAIAKFPGIL 97
           ++L G+ ++K+ L  V+ K P++L   L+  ++  V  L ++   PR+I   + ++P +L
Sbjct: 185 KFLRGLDVEKQDLGYVLMKYPELLGFKLEGTMSTSVAYLVSIGVSPRDIGPMVTQYPYLL 244

Query: 98  SYSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEG 157
              V   + PL+ +  ++G+P+K + +M+     ++ Y++E  +   VD L   G+ KE 
Sbjct: 245 GMRVGTMIKPLVDYLISIGLPKKIVARMLEKRSYIVGYNLEETVKPNVDCLISFGVKKE- 304

Query: 158 MIGKVLVKNPFLIGYSVHKRL-RPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRP 217
           ++  ++ + P ++G  V  ++    + F   + +       V  K P I+    + +++P
Sbjct: 305 LLPLLIAQYPQILGLPVKAKMSTQQYFFSLKLKIDPEGFARVVEKMPQIVSLKQNVIMKP 364

Query: 218 NLDYLRRRGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFK 277
            +++L  R F+  +I  +V   P IL   ++  ++    F    MGR + E+ EYPE+F 
Sbjct: 365 -IEFLLGRAFQVEDIAKMVVRCPQILCSRVE-LMKNSYYFYKTEMGRPMKELVEYPEYFT 424

Query: 278 HGLKKRLELRHRLLKEKTMDFTLSELLECNQKKF 311
           + L+ R++ R++ L+ K +  +L+  L C+ ++F
Sbjct: 425 YSLESRIKPRYQKLQSKGIRSSLNWFLNCSDQRF 455

[Close]

BLAST of CmaCh19G008260 vs. NCBI nr
Match: gi|449453646|ref|XP_004144567.1| (PREDICTED: uncharacterized protein LOC101218706 [Cucumis sativus])

HSP 1 Score: 572.4 bits (1474), Expect = 4.9e-160
Identity = 287/317 (90.54%), Postives = 301/317 (94.95%), Query Frame = 1


Query: 1   MLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRKLPSVVSKCPKI 60
           MLWFFRDKGFDD SIDKMF+KCRRLE MQNERA+ENWEYLE IGIQKRKLPSVVSKCPKI
Sbjct: 12  MLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRKLPSVVSKCPKI 71

Query: 61  LVLGLQEKIAPMVECLATLTTKPREIATAIAKFPGILSYSVEEKLCPLLAFFQALGVPEK 120
           L LGLQEK+ PMVECLATL+TKP EIA AIAKFPGILSYSVEEKLCPLLAFFQALGVPEK
Sbjct: 72  LALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLLAFFQALGVPEK 131

Query: 121 QLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFLIGYSVHKRLRP 180
           QLGKMILLNPRLISYSIESKL+ETVDFLAGVGLTKEG+IGKVL KNPFL+GYSV KRLRP
Sbjct: 132 QLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFLMGYSVDKRLRP 191

Query: 181 TFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDGEIVSLVTGYPP 240
           T EFLKSIGL++MDLQAVALKFPDILCRDVDKVLR NLDYLR RGFKDGEIVSLVTGYPP
Sbjct: 192 TVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDGEIVSLVTGYPP 251

Query: 241 ILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRLLKEKTMDFTLS 300
           +LIKSIQHSLEPRIRFLVEIMGR L+EVAEYP+FFKHGLKK+LELRHRLLKEK +DF LS
Sbjct: 252 VLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRLLKEKNVDFALS 311

Query: 301 ELLECNQKKFMMKMSLL 318
           ELLECNQKKFMMKM LL
Sbjct: 312 ELLECNQKKFMMKMGLL 328

[Close]

BLAST of CmaCh19G008260 vs. NCBI nr
Match: gi|659100596|ref|XP_008451174.1| (PREDICTED: mTERF domain-containing protein 1, mitochondrial [Cucumis melo])

HSP 1 Score: 571.6 bits (1472), Expect = 8.4e-160
Identity = 286/317 (90.22%), Postives = 300/317 (94.64%), Query Frame = 1


Query: 1   MLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRKLPSVVSKCPKI 60
           MLWFFRDKGFDD SIDKMF+KCRRLE  QNERA+ENWEYLE IGIQKRKLPSVVSKCPKI
Sbjct: 12  MLWFFRDKGFDDRSIDKMFRKCRRLEDTQNERASENWEYLERIGIQKRKLPSVVSKCPKI 71

Query: 61  LVLGLQEKIAPMVECLATLTTKPREIATAIAKFPGILSYSVEEKLCPLLAFFQALGVPEK 120
           L LGLQEK+ PMVECLATL+TKP EIA AIAKFPGILSYSVEEKLCPLLAFFQALGVPEK
Sbjct: 72  LALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLLAFFQALGVPEK 131

Query: 121 QLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFLIGYSVHKRLRP 180
            LGKMILLNPRLISYSIESKL+ETVDFLAGVGLTKEG+IGKVL KNPFL+GYSV KRLRP
Sbjct: 132 HLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFLMGYSVDKRLRP 191

Query: 181 TFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDGEIVSLVTGYPP 240
           T EFLKSIGL++MDLQAVALKFPDILCRDVDKVLR NLDYLR RGFKDGEIVS+VTGYPP
Sbjct: 192 TVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRSNLDYLRSRGFKDGEIVSMVTGYPP 251

Query: 241 ILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRLLKEKTMDFTLS 300
           +LIKSIQHSLEPRIRFLVEIMGR LDEVAEYP+FFKHGLKK+LELRHRLLKEK +DFTLS
Sbjct: 252 VLIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPDFFKHGLKKKLELRHRLLKEKNVDFTLS 311

Query: 301 ELLECNQKKFMMKMSLL 318
           ELLECNQKKFMMKM LL
Sbjct: 312 ELLECNQKKFMMKMGLL 328

[Close]

BLAST of CmaCh19G008260 vs. NCBI nr
Match: gi|1009150330|ref|XP_015892962.1| (PREDICTED: uncharacterized protein LOC107427130 [Ziziphus jujuba])

HSP 1 Score: 492.7 bits (1267), Expect = 5.0e-136
Identity = 238/317 (75.08%), Postives = 281/317 (88.64%), Query Frame = 1


Query: 1   MLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRKLPSVVSKCPKI 60
           ++WFFRDKGFDD SI +MFKKCRRLEG+Q ERA+ENW YL+ IGIQ+RKLPSVVSKCPKI
Sbjct: 10  IMWFFRDKGFDDKSIHEMFKKCRRLEGLQRERASENWAYLKSIGIQERKLPSVVSKCPKI 69

Query: 61  LVLGLQEKIAPMVECLATLTTKPREIATAIAKFPGILSYSVEEKLCPLLAFFQALGVPEK 120
           L LGL EK+ P VECL TL TKPRE+A+AIAKFP ILS+SVEEKLCPLLAFFQALG+PEK
Sbjct: 70  LTLGLHEKLVPTVECLKTLGTKPREVASAIAKFPHILSHSVEEKLCPLLAFFQALGIPEK 129

Query: 121 QLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFLIGYSVHKRLRP 180
           QLGKMILLNPRLISYSIE+KL E V+FLA +GL ++GMIGKVLVKNP+++GY+V+KRLRP
Sbjct: 130 QLGKMILLNPRLISYSIETKLAEIVEFLASLGLARDGMIGKVLVKNPYIMGYNVNKRLRP 189

Query: 181 TFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDGEIVSLVTGYPP 240
           T EFLKSIGL+E+ LQ VA+ FP++LCRDVDK+LRPN  YL+R GF DG+I +LVTGYPP
Sbjct: 190 TAEFLKSIGLTELGLQTVAMNFPEVLCRDVDKILRPNFYYLQRCGFNDGQIATLVTGYPP 249

Query: 241 ILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRLLKEKTMDFTLS 300
           ILIKSIQ+SLEPRIRFLVE+MGR +DEV  +P FF++GLKKRLE RHRLLK + +D +LS
Sbjct: 250 ILIKSIQNSLEPRIRFLVEVMGRRIDEVTNFPYFFRYGLKKRLEQRHRLLKHQKLDCSLS 309

Query: 301 ELLECNQKKFMMKMSLL 318
           E+L+CNQKKF MK  L+
Sbjct: 310 EMLDCNQKKFQMKFGLV 326

[Close]

BLAST of CmaCh19G008260 vs. NCBI nr
Match: gi|728847896|gb|KHG27339.1| (mTERF domain-containing 1, mitochondrial [Gossypium arboreum])

HSP 1 Score: 485.7 bits (1249), Expect = 6.1e-134
Identity = 233/316 (73.73%), Postives = 283/316 (89.56%), Query Frame = 1


Query: 1   MLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRKLPSVVSKCPKI 60
           ++WFFRDKGFDD SI++MFKKC+RL+G+  ERA+ENW YL+ IGIQ+RKLPSVVSKCPKI
Sbjct: 12  IMWFFRDKGFDDKSINEMFKKCKRLQGVHKERASENWSYLKSIGIQERKLPSVVSKCPKI 71

Query: 61  LVLGLQEKIAPMVECLATLTTKPREIATAIAKFPGILSYSVEEKLCPLLAFFQALGVPEK 120
           L LGL EK+ PMVECLATL TK RE+A+AIA+FP I+S+SVEEKLCPLLAFFQALGV E+
Sbjct: 72  LALGLYEKLVPMVECLATLGTKRREVASAIARFPQIVSHSVEEKLCPLLAFFQALGVSER 131

Query: 121 QLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFLIGYSVHKRLRP 180
           QLGKMILLNPRLISYSIESKL + V+FLA +GLT+EGMIGKVL K PF++GY+V+KRLRP
Sbjct: 132 QLGKMILLNPRLISYSIESKLTDIVNFLATLGLTREGMIGKVLAKYPFIMGYNVNKRLRP 191

Query: 181 TFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDGEIVSLVTGYPP 240
           T EFLKS+GLS+ DLQ V + FP++LCRDVDK+LRPN  YL+R GF+D +I +LVTGYPP
Sbjct: 192 TTEFLKSVGLSKTDLQIVTMNFPEVLCRDVDKILRPNFAYLKRSGFEDRQIAALVTGYPP 251

Query: 241 ILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRLLKEKTMDFTLS 300
           ILIKSI++SLEPRI+FLVE+MGR +DEVA YP+FF+HGLKKR+ELRHRLLKEK ++ +LS
Sbjct: 252 ILIKSIKNSLEPRIKFLVEVMGRQIDEVANYPDFFRHGLKKRVELRHRLLKEKDVNCSLS 311

Query: 301 ELLECNQKKFMMKMSL 317
           E+L+CNQKKF++K  L
Sbjct: 312 EMLDCNQKKFLLKFGL 327

[Close]

BLAST of CmaCh19G008260 vs. NCBI nr
Match: gi|470107525|ref|XP_004290095.1| (PREDICTED: uncharacterized protein LOC101310477 [Fragaria vesca subsp. vesca])

HSP 1 Score: 485.7 bits (1249), Expect = 6.1e-134
Identity = 233/317 (73.50%), Postives = 280/317 (88.33%), Query Frame = 1


Query: 1   MLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRKLPSVVSKCPKI 60
           ++WFFRDKGFDD SI +MFKKC+RLE M  E A+ENW YLE IGIQ+RKLPSVVSKCPKI
Sbjct: 13  IMWFFRDKGFDDKSISEMFKKCKRLENMNRESASENWAYLESIGIQERKLPSVVSKCPKI 72

Query: 61  LVLGLQEKIAPMVECLATLTTKPREIATAIAKFPGILSYSVEEKLCPLLAFFQALGVPEK 120
           L LGL EK+ P VECLATL TKPRE+A+AIAKFP ILS+SVEEKLCPLLAFF+ALGVP+K
Sbjct: 73  LTLGLHEKLVPTVECLATLGTKPREVASAIAKFPHILSHSVEEKLCPLLAFFEALGVPQK 132

Query: 121 QLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFLIGYSVHKRLRP 180
           QLGKMILLNPRLISYSI++KL + VDFLA +GL ++GMIGKVLVKNPF++GYSV KRLRP
Sbjct: 133 QLGKMILLNPRLISYSIDTKLKDIVDFLADLGLARDGMIGKVLVKNPFIMGYSVDKRLRP 192

Query: 181 TFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDGEIVSLVTGYPP 240
           T EFLKS GL+E  +Q VA+ FP++LCRDVDK+LRPN D+L+R GF+DG+I +LVTGYPP
Sbjct: 193 TAEFLKSFGLTEQGIQTVAIHFPEVLCRDVDKILRPNFDFLKRSGFEDGQIAALVTGYPP 252

Query: 241 ILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRLLKEK-TMDFTL 300
           ILIKSI +SLEPRI+FLVE+MGR +DEV +YP+FF+HGLKK++E RH+LLK+K T D +L
Sbjct: 253 ILIKSIHNSLEPRIKFLVEVMGRRIDEVTDYPDFFRHGLKKKVERRHKLLKQKTTTDCSL 312

Query: 301 SELLECNQKKFMMKMSL 317
           SE+L+CNQKKF++K  L
Sbjct: 313 SEMLDCNQKKFLLKFGL 329

The following BLAST results are available for this feature:

BLAST of CmaCh19G008260 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MTEF6_ARATH	2.7e-118	66.03	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]
MTEF5_ARATH	4.5e-28	28.27	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana G...	[more]
MTEF2_ARATH	5.8e-28	25.77	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana G...	[more]
MTEF9_ARATH	1.3e-22	26.69	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana G...	[more]
MTEF1_ARATH	1.7e-19	29.08	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana GN...	[more]

BLAST of CmaCh19G008260 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K108_CUCSA	3.4e-160	90.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G029940 PE=4 SV=1	[more]
A0A0B0PSD9_GOSAR	4.2e-134	73.73	mTERF domain-containing 1, mitochondrial OS=Gossypium arboreum GN=F383_08997 PE=...	[more]
A0A061E9I9_THECC	2.7e-133	74.68	Mitochondrial transcription termination factor family protein OS=Theobroma cacao...	[more]
M5W6R0_PRUPE	6.1e-133	72.56	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008508mg PE=4 SV=1	[more]
A0A0D2VA23_GOSRA	2.3e-132	73.10	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G065400 PE=4 SV=1	[more]

BLAST of CmaCh19G008260 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38160.3	1.5e-119	66.03	Mitochondrial transcription termination factor family protein	[more]
AT1G78930.1	4.6e-31	30.63	Mitochondrial transcription termination factor family protein	[more]
AT4G14605.1	2.5e-29	28.27	Mitochondrial transcription termination factor family protein	[more]
AT2G21710.1	3.3e-29	25.77	Mitochondrial transcription termination factor family protein	[more]
AT2G44020.1	6.4e-25	24.45	Mitochondrial transcription termination factor family protein	[more]

BLAST of CmaCh19G008260 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449453646\|ref\|XP_004144567.1\|	4.9e-160	90.54	PREDICTED: uncharacterized protein LOC101218706 [Cucumis sativus]	[more]
gi\|659100596\|ref\|XP_008451174.1\|	8.4e-160	90.22	PREDICTED: mTERF domain-containing protein 1, mitochondrial [Cucumis melo]	[more]
gi\|1009150330\|ref\|XP_015892962.1\|	5.0e-136	75.08	PREDICTED: uncharacterized protein LOC107427130 [Ziziphus jujuba]	[more]
gi\|728847896\|gb\|KHG27339.1\|	6.1e-134	73.73	mTERF domain-containing 1, mitochondrial [Gossypium arboreum]	[more]
gi\|470107525\|ref\|XP_004290095.1\|	6.1e-134	73.50	PREDICTED: uncharacterized protein LOC101310477 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003690	MTERF

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003690	double-stranded DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003690	double-stranded DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G008260.1	CmaCh19G008260.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 4..310 score: 3.6
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 160..191 score: 1.0E-7coord: 265..296 score: 19.0coord: 51..82 score: 53.0coord: 232..264 score: 0.12coord: 16..46 score: 390.0coord: 196..227 score: 0.02coord: 123..154 score: 3.1E-4coord: 87..118 score: 5.
None	No IPR available	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 1..317 score: 1.2E
None	No IPR available	PANTHER	PTHR13068:SF5	MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN	coord: 1..317 score: 1.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh19G008260	Cucsa.100000	Cucumber (Gy14) v1	cgycmaB0216
CmaCh19G008260	Cucsa.120010	Cucumber (Gy14) v1	cgycmaB0297
CmaCh19G008260	Cla015718	Watermelon (97103) v1	cmawmB503
CmaCh19G008260	Csa6G117190	Cucumber (Chinese Long) v2	cmacuB521
CmaCh19G008260	Csa7G029940	Cucumber (Chinese Long) v2	cmacuB527
CmaCh19G008260	MELO3C015685	Melon (DHL92) v3.5.1	cmameB465
CmaCh19G008260	ClCG02G003170	Watermelon (Charleston Gray)	cmawcgB460
CmaCh19G008260	ClCG02G010730	Watermelon (Charleston Gray)	cmawcgB461
CmaCh19G008260	CSPI06G09530	Wild cucumber (PI 183967)	cmacpiB527
CmaCh19G008260	CSPI07G02370	Wild cucumber (PI 183967)	cmacpiB533
CmaCh19G008260	CmoCh19G008430	Cucurbita moschata (Rifu)	cmacmoB508
CmaCh19G008260	Lsi11G013180	Bottle gourd (USVL1VR-Ls)	cmalsiB472
CmaCh19G008260	Cp4.1LG15g06740	Cucurbita pepo (Zucchini)	cmacpeB522
CmaCh19G008260	MELO3C015685.2	Melon (DHL92) v3.6.1	cmamedB539
CmaCh19G008260	CsaV3_7G002240	Cucumber (Chinese Long) v3	cmacucB0638
CmaCh19G008260	CsaV3_6G009960	Cucumber (Chinese Long) v3	cmacucB0632
CmaCh19G008260	Cla97C02G029690	Watermelon (97103) v2	cmawmbB531
CmaCh19G008260	Bhi05G001327	Wax gourd	cmawgoB0652
CmaCh19G008260	CsGy7G002080	Cucumber (Gy14) v2	cgybcmaB944
CmaCh19G008260	CsGy6G009620	Cucumber (Gy14) v2	cgybcmaB784
CmaCh19G008260	Carg04122	Silver-seed gourd	carcmaB0279

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh19G008260	Melon (DHL92) v3.6.1	cmamedB525
CmaCh19G008260	Silver-seed gourd	carcmaB0484
CmaCh19G008260	Silver-seed gourd	carcmaB1183
CmaCh19G008260	Silver-seed gourd	carcmaB1473
CmaCh19G008260	Silver-seed gourd	carcmaB1474
CmaCh19G008260	Cucurbita maxima (Rimu)	cmacmaB150
CmaCh19G008260	Cucurbita maxima (Rimu)	cmacmaB151
CmaCh19G008260	Cucurbita maxima (Rimu)	cmacmaB445
CmaCh19G008260	Cucurbita maxima (Rimu)	cmacmaB448
CmaCh19G008260	Cucurbita moschata (Rifu)	cmacmoB492
CmaCh19G008260	Cucurbita moschata (Rifu)	cmacmoB497
CmaCh19G008260	Cucurbita moschata (Rifu)	cmacmoB515
CmaCh19G008260	Cucurbita moschata (Rifu)	cmacmoB522
CmaCh19G008260	Melon (DHL92) v3.5.1	cmameB451
CmaCh19G008260	Cucurbita pepo (Zucchini)	cmacpeB525
CmaCh19G008260	Cucurbita pepo (Zucchini)	cmacpeB537
CmaCh19G008260	Cucurbita pepo (Zucchini)	cmacpeB542
CmaCh19G008260	Cucurbita pepo (Zucchini)	cmacpeB552
CmaCh19G008260	Bottle gourd (USVL1VR-Ls)	cmalsiB467