Cucsa.100000 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.100000
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Mitochondrial transcription termination factor family protein
Location	scaffold00926 : 634651 .. 636476 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAACTTTTTGCTCTATGTTCTTCTTGCAAGGCCCAGAAATCCTGTTTCTGTAATTCCAATTACCTCAAATTTCCCTCACAACTAGAATTTTGATCGAGCCAGAAAACAATAAAGACTTCCTGTTTATCCATCCGATTTGAAGAAGGTGAACCCAATTTTTTATTGTGTTTATTATCGCCATTCTGCACTGCGTTTCTCTTTTTAATTTGAAGGGTTTCTGAATTTAGAGTTCAATTCCAATTTCCTTTAATAAAACTTGCATTACTTGTTTGTTCTTGCATTGTCATTTCTGCAAACACTTGGTGGGATTATGAAAATTCTGTTTGTATGCTGAATCTTTCAGGGTTTATGGAAAGTAGCGCCAGTCGAAATGGTAATTGCATGCTGTGGTTCTTCAGGGATAAAGGTTTTGATGATAGAAGTATTGATAAGATGTTTAGAAAGTGTAGGCGTTTAGAAGATATGCAGAATGAAAGAGCTTCTGAAAACTGGGAATATTTGGAAAGAATTGGGATTCAAAAGAGGAAACTCCCTTCTGTTGTTTCCAAATGCCCTAAGATTTTAGCTCTTGGTCTTCAAGAGAAACTCGTTCCCATGGTTGAGTGCCTTGCAACACTCAGCACCAAGCCTCATGAAATAGCTGCAGCTATTGCTAAATTTCCCGGTATTCTTTCCTATAGTGTTGAAGAGAAGCTATGCCCACTTTTGGCGTTCTTTCAAGCATTGGGTGTCCCTGAAAAGCAACTTGGAAAGATGATTCTACTCAACCCGAGGCTTATTAGTTACAGCATTGAATCGAAACTCGTTGAAACTGTAGATTTTCTTGCTGGAGTTGGGCTAACGAAGGAGGGGGTGATTGGAAAAGTTCTTGCCAAAAATCCATTTCTCATGGGTTATAGTGTTGATAAAAGGCTCCGCCCGACTGTGGAGTTTCTGAAATCAATCGGTCTAAACAAGATGGATCTTCAAGCAGTTGCACTGAAATTTCCAGACATTTTGTGTAGGGACGTGGACAAAGTTTTGAGATATAATTTAGATTATCTAAGGAGCCGTGGGTTTAAAGATGGAGAAATAGTGTCTTTGGTGACTGGTTATCCTCCTGTTTTGATCAAGAGCATTCAACATTCTTTAGAACCTCGGATCAGATTTTTGGTCGAAATAATGGGAAGAAAACTTGAGGAAGTTGCTGAATATCCTGACTTTTTTAAGCATGGTTTGAAGAAAAAACTTGAGCTGCGGCATAGATTGTTGAAAGAGAAGAACGTTGACTTTGCCTTGAGTGAATTGTTGGAATGCAATCAAAAGAAGTTTATGATGAAAATGGGTTTGTTATGAGGCTATGCCTGGAGTTTTAGGTCATCATATCCTGAAAGAACGTTGTTTTCTCAACATCTTTACAAGTTTTGTTGCCTAATTTTAGTTTTCCGGATTTCTAGTTAAAAGTGAAGAGCATTCGTCTTGCCAAGCAGCTGCCTTTAGGCCTGGATCATTCTTGTCCTCCATTCATGCTTCATGCTTTAGGCTCTTAATGGTTTCCCTTGTGTTTTAACAATTTGAATGGAGTGGAGTACATACAAATTACCCTCTTGTAAACTCCTTGCTCTATTTTGTATAGGTAGAGATTTGAAACCTCTGGTCCTCTCTTGTAGTTTTCTTCTTTAATGTTAAGATTTTTTTGGTGCTAGAATGTGTACTCTTCTTGGACTCATTGTTCTTAACAGTTACAACGGATTGTTGGGTTTTTTTTGCTTCTGGGGTAGCATCTCTTGAAAAATCAAAAGATGTTTTTTACTTGGAGACTTGAATTTACAATTACGAATCGTG

mRNA sequence

TGAAACTTTTTGCTCTATGTTCTTCTTGCAAGGCCCAGAAATCCTGTTTCTGTAATTCCAATTACCTCAAATTTCCCTCACAACTAGAATTTTGATCGAGCCAGAAAACAATAAAGACTTCCTGTTTATCCATCCGATTTGAAGAAGGGTTTATGGAAAGTAGCGCCAGTCGAAATGGTAATTGCATGCTGTGGTTCTTCAGGGATAAAGGTTTTGATGATAGAAGTATTGATAAGATGTTTAGAAAGTGTAGGCGTTTAGAAGATATGCAGAATGAAAGAGCTTCTGAAAACTGGGAATATTTGGAAAGAATTGGGATTCAAAAGAGGAAACTCCCTTCTGTTGTTTCCAAATGCCCTAAGATTTTAGCTCTTGGTCTTCAAGAGAAACTCGTTCCCATGGTTGAGTGCCTTGCAACACTCAGCACCAAGCCTCATGAAATAGCTGCAGCTATTGCTAAATTTCCCGGTATTCTTTCCTATAGTGTTGAAGAGAAGCTATGCCCACTTTTGGCGTTCTTTCAAGCATTGGGTGTCCCTGAAAAGCAACTTGGAAAGATGATTCTACTCAACCCGAGGCTTATTAGTTACAGCATTGAATCGAAACTCGTTGAAACTGTAGATTTTCTTGCTGGAGTTGGGCTAACGAAGGAGGGGGTGATTGGAAAAGTTCTTGCCAAAAATCCATTTCTCATGGGTTATAGTGTTGATAAAAGGCTCCGCCCGACTGTGGAGTTTCTGAAATCAATCGGTCTAAACAAGATGGATCTTCAAGCAGTTGCACTGAAATTTCCAGACATTTTGTGTAGGGACGTGGACAAAGTTTTGAGATATAATTTAGATTATCTAAGGAGCCGTGGGTTTAAAGATGGAGAAATAGTGTCTTTGGTGACTGGTTATCCTCCTGTTTTGATCAAGAGCATTCAACATTCTTTAGAACCTCGGATCAGATTTTTGGTCGAAATAATGGGAAGAAAACTTGAGGAAGTTGCTGAATATCCTGACTTTTTTAAGCATGGTTTGAAGAAAAAACTTGAGCTGCGGCATAGATTGTTGAAAGAGAAGAACGTTGACTTTGCCTTGAGTGAATTGTTGGAATGCAATCAAAAGAAGTTTATGATGAAAATGGGTTTGTTATGAGGCTATGCCTGGAGTTTTAGGTCATCATATCCTGAAAGAACGTTGTTTTCTCAACATCTTTACAAGTTTTGTTGCCTAATTTTAGTTTTCCGGATTTCTAGTTAAAAGTGAAGAGCATTCGTCTTGCCAAGCAGCTGCCTTTAGGCCTGGATCATTCTTGTCCTCCATTCATGCTTCATGCTTTAGGCTCTTAATGGTTTCCCTTGTGTTTTAACAATTTGAATGGAGTGGAGTACATACAAATTACCCTCTTGTAAACTCCTTGCTCTATTTTGTATAGGTAGAGATTTGAAACCTCTGGTCCTCTCTTGTAGTTTTCTTCTTTAATGTTAAGATTTTTTTGGTGCTAGAATGTGTACTCTTCTTGGACTCATTGTTCTTAACAGTTACAACGGATTGTTGGGTTTTTTTTGCTTCTGGGGTAGCATCTCTTGAAAAATCAAAAGATGTTTTTTACTTGGAGACTTGAATTTACAATTACGAATCGTG

Coding sequence (CDS)

ATGGAAAGTAGCGCCAGTCGAAATGGTAATTGCATGCTGTGGTTCTTCAGGGATAAAGGTTTTGATGATAGAAGTATTGATAAGATGTTTAGAAAGTGTAGGCGTTTAGAAGATATGCAGAATGAAAGAGCTTCTGAAAACTGGGAATATTTGGAAAGAATTGGGATTCAAAAGAGGAAACTCCCTTCTGTTGTTTCCAAATGCCCTAAGATTTTAGCTCTTGGTCTTCAAGAGAAACTCGTTCCCATGGTTGAGTGCCTTGCAACACTCAGCACCAAGCCTCATGAAATAGCTGCAGCTATTGCTAAATTTCCCGGTATTCTTTCCTATAGTGTTGAAGAGAAGCTATGCCCACTTTTGGCGTTCTTTCAAGCATTGGGTGTCCCTGAAAAGCAACTTGGAAAGATGATTCTACTCAACCCGAGGCTTATTAGTTACAGCATTGAATCGAAACTCGTTGAAACTGTAGATTTTCTTGCTGGAGTTGGGCTAACGAAGGAGGGGGTGATTGGAAAAGTTCTTGCCAAAAATCCATTTCTCATGGGTTATAGTGTTGATAAAAGGCTCCGCCCGACTGTGGAGTTTCTGAAATCAATCGGTCTAAACAAGATGGATCTTCAAGCAGTTGCACTGAAATTTCCAGACATTTTGTGTAGGGACGTGGACAAAGTTTTGAGATATAATTTAGATTATCTAAGGAGCCGTGGGTTTAAAGATGGAGAAATAGTGTCTTTGGTGACTGGTTATCCTCCTGTTTTGATCAAGAGCATTCAACATTCTTTAGAACCTCGGATCAGATTTTTGGTCGAAATAATGGGAAGAAAACTTGAGGAAGTTGCTGAATATCCTGACTTTTTTAAGCATGGTTTGAAGAAAAAACTTGAGCTGCGGCATAGATTGTTGAAAGAGAAGAACGTTGACTTTGCCTTGAGTGAATTGTTGGAATGCAATCAAAAGAAGTTTATGATGAAAATGGGTTTGTTATGA

Protein sequence

MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDGEIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRLLKEKNVDFALSELLECNQKKFMMKMGLL*

Homology

[Close]

BLAST of Cucsa.100000 vs. Swiss-Prot
Match: MTEF6_ARATH (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 4.0e-120
Identity = 208/321 (64.80%), Postives = 265/321 (82.55%), Query Frame = 1


Query: 8   NGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERI-GIQKRKLPSVVS 67
           N + ++WFFRDKGFDD SIDKM RKC++LE  Q++ ASENW+YL  I GIQ+RKLP +VS
Sbjct: 5   NTSSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVS 64

Query: 68  KCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLLAFFQAL 127
           +CPKIL L L E+L+PMVECL++L   P E+A+AI KFP ILS+SVEEKLCPLLAFFQAL
Sbjct: 65  RCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQAL 124

Query: 128 GVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFLMGYSVD 187
           GVPE QLGKMIL NPRLISYSI++KL   V FLA +GL ++G+IGKVL KNPFLMGYSVD
Sbjct: 125 GVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVD 184

Query: 188 KRLRPTVEFLK-SIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDGEIVSL 247
           KRLRPT EFLK S+GL++  +++V + FP +LCRDV+K+L+ N DYL+  GF D +I ++
Sbjct: 185 KRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATM 244

Query: 248 VTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRLLKEKN 307
           VTGYP +LIKS+++SL+PRIRFLV++MGR ++EVA YP+FF HGLKKK+E R +L+K+ N
Sbjct: 245 VTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNN 304

Query: 308 VDFALSELLECNQKKFMMKMG 327
           +D +L E+L+CN KKF  K G
Sbjct: 305 IDCSLREMLDCNTKKFHEKFG 325

[Close]

BLAST of Cucsa.100000 vs. Swiss-Prot
Match: MTEF2_ARATH (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 3.6e-28
Identity = 75/291 (25.77%), Postives = 148/291 (50.86%), Query Frame = 1


Query: 32  KCRRLEDMQNERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLS 91
           +C  L     E      ++  ++G+ +    ++V   PKI+     + +   +  L    
Sbjct: 304 RCPELLSFSMEEVKSRVDFFLKMGMNQNDFGTMVYDYPKIIGFFSFQVMEKKINYLKEFG 363

Query: 92  TKPHEIAAAIAKFPGILSYSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESK 151
               E+   +A  P ++  S+EE+  PL+ +F  LG+P++ + +++++ P L    +E  
Sbjct: 364 LSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKT 423

Query: 152 LVETVDFLAGVGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTVEFLKS-IGLNKMDLQAVA 211
           +   V FL  +G+  E  IG +L K P L+  S+ K++RP V FL +  G+ + D+  V 
Sbjct: 424 IAPKVRFLQEMGIPNE-AIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVI 483

Query: 212 LKFPDILCRDVDKVLRYNLDYLRSRGFKDGEIVSLVTGYPPVLIKSIQHSLEPRIRFLVE 271
              P +L   +   L  N+ Y  S G +  ++  ++  +P +L  ++  +L P+ R+L  
Sbjct: 484 AMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVD-NLRPKYRYLRR 543

Query: 272 IMGRKLEEVAEYPDFFKHGLKKKLELRHRLLKEKNVDFALSELLECNQKKF 322
            M R L+++ E+P FF + L++++  RH ++ E  V+F L  +L C  ++F
Sbjct: 544 TMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENRVNFKLRYMLACTDEEF 592

HSP 2 Score: 87.0 bits (214), Expect = 4.1e-16
Identity = 50/205 (24.39%), Postives = 111/205 (54.15%), Query Frame = 1


Query: 77  QEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLLAFFQALGVPEKQLGKM 136
           +E+L  +VE L +   +   +   + + P +LS+S+EE +   + FF  +G+ +   G M
Sbjct: 278 REELNEIVEYLESNGVRRDWMGYVVGRCPELLSFSMEE-VKSRVDFFLKMGMNQNDFGTM 337

Query: 137 ILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTVEFL 196
           +   P++I +     + + +++L   GL+ E V G++LA  P LMG S+++R +P V++ 
Sbjct: 338 VYDYPKIIGFFSFQVMEKKINYLKEFGLSTEEV-GRLLAYKPHLMGCSIEERWKPLVKYF 397

Query: 197 KSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDGEIVSLVTGYPPVLIKS 256
             +G+ K  ++ + +  P + C D++K +   + +L+  G  +  I +++  +P +L  S
Sbjct: 398 YYLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNS 457

Query: 257 IQHSLEPRIRFLVEIMGRKLEEVAE 282
           +   + P + FL+   G   +++ +
Sbjct: 458 LYKKIRPVVIFLLTRAGVTQKDIGK 480

[Close]

BLAST of Cucsa.100000 vs. Swiss-Prot
Match: MTEF5_ARATH (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana GN=MTERF5 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.3e-27
Identity = 85/316 (26.90%), Postives = 162/316 (51.27%), Query Frame = 1


Query: 19  KGFDDRSID-KMFRKCRRLEDMQNERASENWE-YLERIGIQKRKLPSVVSKCPKILALGL 78
           +G  D + D +  R   R+ ++  E A      YL  +G+   ++ ++  K        L
Sbjct: 169 RGDTDSAADTRKLRAVSRVSELDTEGALRPQTLYLLDLGLNLEQIKTITRKFAAFPYYSL 228

Query: 79  QEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLLAFFQALGVPEKQLGKM 138
             K+ P+VE L  L     +I   + K P I   S+ + L P +AF + LG+ + Q  K+
Sbjct: 229 DGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKI 288

Query: 139 ILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTVEFL 198
           I   P +++YS   KL  TV+FL+  GLT+E  IG++L + P +M YSV+ +LRPT+E+ 
Sbjct: 289 ISRFPAILTYS-RQKLTSTVEFLSQTGLTEE-QIGRILTRCPNIMSYSVEDKLRPTMEYF 348

Query: 199 KSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDGEIVSLVTGYPPVLIKS 258
           +S+    +D+  +  + P      ++  L+   ++   +GF   EI  +++ Y  +   S
Sbjct: 349 RSL---NVDVAVLLHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFS 408

Query: 259 IQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRLLKEKNVDFALSELLEC 318
           ++ ++ P+  +  + M     E+ ++P FF + L+++++ R+ L++   V   L+++L  
Sbjct: 409 LKENVMPKWDYF-QTMDYPKSELVKFPQFFGYSLQERIKPRYELVQRSGVRLLLNQVLSL 468

Query: 319 N-------QKKFMMKM 326
           +        KK MMK+
Sbjct: 469 SGIEFEKVVKKKMMKL 478

[Close]

BLAST of Cucsa.100000 vs. Swiss-Prot
Match: MTEF9_ARATH (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 5.0e-22
Identity = 74/279 (26.52%), Postives = 138/279 (49.46%), Query Frame = 1


Query: 49  EYLERIGIQK--------RKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAA 108
           +YL   G+++        R +PS+     +I     QE+L    + L ++  K  +I   
Sbjct: 189 DYLSTFGLKESHFVQMYERHMPSL-----QINVFSAQERL----DYLLSVGVKHRDIKRM 248

Query: 109 IAKFPGILSYSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLA 168
           + + P IL Y+VE  L   ++F   LG+P  ++G+++   P L SYS+E+ L  T+ +L 
Sbjct: 249 LLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPTIRYLI 308

Query: 169 GVGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTVEFL-KSIGLNKMDLQAVALKFPDILCR 228
                KE  +GKV+  +P ++   +D        FL K +G  +  +  +  K P +L  
Sbjct: 309 EEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHY 368

Query: 229 DVDKVLRYNLDYLRSRGFKDGEIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEV 288
            +D      +++LRS G  + +I+ ++T    VL  S++ +L+P+  +LV  +  ++  +
Sbjct: 369 SIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHIL 428

Query: 289 AEYPDFFKHGLKKKLELRHRLL----KEKNVDFALSELL 315
            +YP +    L +++  RHR L    K +   F LS L+
Sbjct: 429 TKYPMYLSLSLDQRIRPRHRFLVELKKVRKGPFPLSSLV 458

HSP 2 Score: 62.0 bits (149), Expect = 1.4e-08
Identity = 44/161 (27.33%), Postives = 81/161 (50.31%), Query Frame = 1


Query: 139 LNPRLIS-YSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFLM--GYSVDKRLRPTVEF 198
           L PRL     I+ K V  +D+L+  GL +   +       P L    +S  +RL    ++
Sbjct: 170 LYPRLAEEIDIDPKCVPLLDYLSTFGLKESHFVQMYERHMPSLQINVFSAQERL----DY 229

Query: 199 LKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDGEIVSLVTGYPPVLIK 258
           L S+G+   D++ + L+ P IL   V+  L+ ++ +L   G  + +I  +V   P +   
Sbjct: 230 LLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFSY 289

Query: 259 SIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLEL 297
           S+++SL P IR+L+E +G K  +V +        L ++L++
Sbjct: 290 SVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDI 326

[Close]

BLAST of Cucsa.100000 vs. Swiss-Prot
Match: MTEF1_ARATH (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 3.6e-20
Identity = 68/246 (27.64%), Postives = 130/246 (52.85%), Query Frame = 1


Query: 77  QEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLLAFFQALGVPEKQLGKM 136
           +EKL+     L  L+  PH+   A+   P + S  +   +  +     + G+    +G++
Sbjct: 34  REKLI----YLQDLNVDPHK---ALRVNPSLRSAPISS-VVSVETLLSSTGLSRPAVGRI 93

Query: 137 ILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTVEFL 196
           + + P L++   ES+++  + FL+      E  I K +++ P L+  SVD +LRP + FL
Sbjct: 94  LDMFPDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFL 153

Query: 197 KSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSR-GFKDGEIVSLVTGYPPVLIK 256
           K++G    D   +  +   +L  +V++ L   ++YL    GF   E+  +V   P +L  
Sbjct: 154 KTLGFVGRD--TITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTY 213

Query: 257 SIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRLLKEKNVDFALSELLE 316
           S+ ++L P++ F +E M   ++E+  +P +F   L++K++ RHRLLKE  +   LSE+L+
Sbjct: 214 SVDNNLVPKVEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLK 269

Query: 317 CNQKKF 322
            +  +F
Sbjct: 274 VSDGQF 269

HSP 2 Score: 62.0 bits (149), Expect = 1.4e-08
Identity = 41/147 (27.89%), Postives = 79/147 (53.74%), Query Frame = 1


Query: 51  LERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLAT-LSTKPHEIAAAIAKFPGILS 110
           L   G+ +  +  ++   P +L    + +++P++  L+  +S    +I  +I++ P +L 
Sbjct: 72  LSSTGLSRPAVGRILDMFPDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLI 131

Query: 111 YSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFL-AGVGLTKEG 170
            SV+ +L P L F + LG   +    +   N  L+  ++E  L+  +++L  G+G T+E 
Sbjct: 132 SSVDYQLRPALTFLKTLGFVGRD--TITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREE 191

Query: 171 VIGKVLAKNPFLMGYSVDKRLRPTVEF 196
           V  K++ ++P L+ YSVD  L P VEF
Sbjct: 192 V-AKMVVRSPALLTYSVDNNLVPKVEF 215

HSP 3 Score: 60.5 bits (145), Expect = 4.1e-08
Identity = 39/151 (25.83%), Postives = 79/151 (52.32%), Query Frame = 1


Query: 54  IGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVE 113
           I I ++ +P  +S+CP++L   +  +L P +  L TL     +   +  +   +L  +VE
Sbjct: 112 ISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGRDTITS--RNTVLLVSNVE 171

Query: 114 EKLCPLLAFFQ-ALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIG- 173
             L P + + +  LG   +++ KM++ +P L++YS+++ LV  V+F        E + G 
Sbjct: 172 RTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPKVEFFI------EEMRGD 231

Query: 174 -KVLAKNPFLMGYSVDKRLRPTVEFLKSIGL 202
            K L + P    +S++++++P    LK  G+
Sbjct: 232 VKELKRFPQYFSFSLERKIKPRHRLLKEHGI 254

HSP 4 Score: 41.6 bits (96), Expect = 2.0e-02
Identity = 36/136 (26.47%), Postives = 65/136 (47.79%), Query Frame = 1


Query: 23  DRSIDKMFRKCRRL----EDMQNERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQE 82
           ++ I K   +C RL     D Q   A     +L+ +G   R   ++ S+   +L   ++ 
Sbjct: 116 EQDIPKSISRCPRLLISSVDYQLRPALT---FLKTLGFVGRD--TITSRNTVLLVSNVER 175

Query: 83  KLVPMVECLAT-LSTKPHEIAAAIAKFPGILSYSVEEKLCPLLAFF-QALGVPEKQLGKM 142
            L+P +E L   L     E+A  + + P +L+YSV+  L P + FF + +    K+L + 
Sbjct: 176 TLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPKVEFFIEEMRGDVKELKRF 235

Query: 143 ILLNPRLISYSIESKL 153
               P+  S+S+E K+
Sbjct: 236 ----PQYFSFSLERKI 242

[Close]

BLAST of Cucsa.100000 vs. TrEMBL
Match: A0A0A0K108_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G029940 PE=4 SV=1)

HSP 1 Score: 649.8 bits (1675), Expect = 1.8e-183
Identity = 328/328 (100.00%), Postives = 328/328 (100.00%), Query Frame = 1


Query: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60
           MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK
Sbjct: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180
           AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL
Sbjct: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180

Query: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240
           MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG
Sbjct: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240

Query: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300
           EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL
Sbjct: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300

Query: 301 LKEKNVDFALSELLECNQKKFMMKMGLL 329
           LKEKNVDFALSELLECNQKKFMMKMGLL
Sbjct: 301 LKEKNVDFALSELLECNQKKFMMKMGLL 328

[Close]

BLAST of Cucsa.100000 vs. TrEMBL
Match: A0A061E9I9_THECC (Mitochondrial transcription termination factor family protein OS=Theobroma cacao GN=TCM_007613 PE=4 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 1.2e-139
Identity = 244/327 (74.62%), Postives = 291/327 (88.99%), Query Frame = 1


Query: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60
           ME ++S+NG+ ++WFFRDKGFDD+SI++MFRKC+RL+ +Q ERASENW YL+ IGIQ+RK
Sbjct: 1   MEVASSQNGSSIMWFFRDKGFDDKSINEMFRKCKRLQGVQKERASENWAYLKSIGIQERK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120
           LPSVVS+CPKIL LGL EKLVPMVECLATL TK HE+A+AIA+FP I+S+SVEEKLCPLL
Sbjct: 61  LPSVVSRCPKILTLGLNEKLVPMVECLATLGTKRHEVASAIARFPHIISHSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180
           AFFQALGVPEKQLGKMILLNPRLISYSIESKL E VDFLA +GLT+EG+IGKVL+K PF+
Sbjct: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLTEIVDFLATLGLTREGMIGKVLSKYPFI 180

Query: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240
           MGYSVDKRLRPT EFLKS+GL++ DLQ VA+ FP++LCRDV K+LR N  YL   GF D 
Sbjct: 181 MGYSVDKRLRPTSEFLKSVGLSETDLQTVAMNFPEVLCRDVRKILRPNFAYLERCGFGDR 240

Query: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300
           E  +LV GYPP+LIKSI++SLEPRIRFLVE+MGR++EEVA YPDFF+HGLKK+LELRHRL
Sbjct: 241 EKAALVAGYPPILIKSIKNSLEPRIRFLVEVMGRQIEEVANYPDFFRHGLKKRLELRHRL 300

Query: 301 LKEKNVDFALSELLECNQKKFMMKMGL 328
           LKEK+V  +LSE+L+CN KKF++K GL
Sbjct: 301 LKEKDVTCSLSEMLDCNHKKFLLKFGL 327

[Close]

BLAST of Cucsa.100000 vs. TrEMBL
Match: A0A0B0PSD9_GOSAR (mTERF domain-containing 1, mitochondrial OS=Gossypium arboreum GN=F383_08997 PE=4 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 2.5e-137
Identity = 236/327 (72.17%), Postives = 293/327 (89.60%), Query Frame = 1


Query: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60
           M+ ++ +NG  ++WFFRDKGFDD+SI++MF+KC+RL+ +  ERASENW YL+ IGIQ+RK
Sbjct: 1   MDVTSCQNGGSIMWFFRDKGFDDKSINEMFKKCKRLQGVHKERASENWSYLKSIGIQERK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILALGL EKLVPMVECLATL TK  E+A+AIA+FP I+S+SVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILALGLYEKLVPMVECLATLGTKRREVASAIARFPQIVSHSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180
           AFFQALGV E+QLGKMILLNPRLISYSIESKL + V+FLA +GLT+EG+IGKVLAK PF+
Sbjct: 121 AFFQALGVSERQLGKMILLNPRLISYSIESKLTDIVNFLATLGLTREGMIGKVLAKYPFI 180

Query: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240
           MGY+V+KRLRPT EFLKS+GL+K DLQ V + FP++LCRDVDK+LR N  YL+  GF+D 
Sbjct: 181 MGYNVNKRLRPTTEFLKSVGLSKTDLQIVTMNFPEVLCRDVDKILRPNFAYLKRSGFEDR 240

Query: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300
           +I +LVTGYPP+LIKSI++SLEPRI+FLVE+MGR+++EVA YPDFF+HGLKK++ELRHRL
Sbjct: 241 QIAALVTGYPPILIKSIKNSLEPRIKFLVEVMGRQIDEVANYPDFFRHGLKKRVELRHRL 300

Query: 301 LKEKNVDFALSELLECNQKKFMMKMGL 328
           LKEK+V+ +LSE+L+CNQKKF++K GL
Sbjct: 301 LKEKDVNCSLSEMLDCNQKKFLLKFGL 327

[Close]

BLAST of Cucsa.100000 vs. TrEMBL
Match: A0A067LEZ1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10773 PE=4 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 2.7e-136
Identity = 232/328 (70.73%), Postives = 288/328 (87.80%), Query Frame = 1


Query: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60
           ME +++ NG C++WFFRD+GFDD+SI +MFRKC+RLE +Q ERASENW YL+ IGIQ+RK
Sbjct: 1   MELASTANGGCIMWFFRDRGFDDKSIREMFRKCKRLEGVQRERASENWSYLKSIGIQERK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120
           LP VVSKCPKIL LGL EKL+PMVECL+TLS K  E+ +AI KFP ILS+S+EEKLCPLL
Sbjct: 61  LPYVVSKCPKILTLGLNEKLIPMVECLSTLSAKRSEVVSAITKFPHILSHSLEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180
           AFFQALGVPEKQLGK+ILLNPRLISYSI+SKL E VDFLA +GL  +G+IGKVL K+PF+
Sbjct: 121 AFFQALGVPEKQLGKIILLNPRLISYSIDSKLTEIVDFLASLGLAGDGMIGKVLVKHPFI 180

Query: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240
           MGYSV+KRLRPT EF+KS+GL +++LQ V + FP++LCRDVDK LR NL YL++RGF+D 
Sbjct: 181 MGYSVEKRLRPTSEFMKSVGLTELNLQTVVMNFPEVLCRDVDKTLRPNLAYLKNRGFEDR 240

Query: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300
           +I +LVTGYPPVL+KSI++SLEPR+ FLVE+MGR+++E AEYP+FF+H  KK LELRH+L
Sbjct: 241 QIAALVTGYPPVLVKSIRNSLEPRMNFLVEVMGRQIDEAAEYPNFFQHSFKKTLELRHKL 300

Query: 301 LKEKNVDFALSELLECNQKKFMMKMGLL 329
           LK+KN++ +LSE+LECNQKKF+MK GLL
Sbjct: 301 LKQKNIECSLSEMLECNQKKFLMKFGLL 328

[Close]

BLAST of Cucsa.100000 vs. TrEMBL
Match: A0A0D2VA23_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G065400 PE=4 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 1.4e-135
Identity = 234/327 (71.56%), Postives = 290/327 (88.69%), Query Frame = 1


Query: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60
           M+ ++ +NG  ++WFFRDKGFDD+SI++MF+KC+RL+ +  ERASENW YL+ IGIQ+RK
Sbjct: 1   MDVTSCQNGGSIMWFFRDKGFDDKSINEMFKKCKRLQGVHKERASENWSYLKSIGIQERK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILALGL EKLVPMVECLATL T+  E+A+AIA+FP I+S+SVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILALGLYEKLVPMVECLATLGTERREVASAIARFPQIVSHSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180
           AFFQALGV E+QLGKMILLNPRLISYSIESKL + V+FLA +GLT+E +IGKVLAK PF+
Sbjct: 121 AFFQALGVSERQLGKMILLNPRLISYSIESKLTDIVNFLATLGLTREWMIGKVLAKYPFI 180

Query: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240
           MGYSV+KRLRPT EFLKS+GL+K DLQ V + FP++LCRDVDK+LR N  YL   GF+D 
Sbjct: 181 MGYSVNKRLRPTTEFLKSVGLSKTDLQTVTMNFPEVLCRDVDKILRPNFAYLERSGFEDR 240

Query: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300
           +I +LVTGYPP+LIKSI++SLEPRI+FLVE+MGR+++EVA YPDFF+HGLKK++ELRHRL
Sbjct: 241 QIAALVTGYPPILIKSIKNSLEPRIKFLVEVMGRQIDEVANYPDFFRHGLKKRVELRHRL 300

Query: 301 LKEKNVDFALSELLECNQKKFMMKMGL 328
           LKEK+V+ +LSE+L+CN KKF++K GL
Sbjct: 301 LKEKDVNCSLSEMLDCNHKKFLLKFGL 327

[Close]

BLAST of Cucsa.100000 vs. TAIR10
Match: AT4G38160.3 (AT4G38160.3 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 432.6 bits (1111), Expect = 2.2e-121
Identity = 208/321 (64.80%), Postives = 265/321 (82.55%), Query Frame = 1


Query: 8   NGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERI-GIQKRKLPSVVS 67
           N + ++WFFRDKGFDD SIDKM RKC++LE  Q++ ASENW+YL  I GIQ+RKLP +VS
Sbjct: 5   NTSSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVS 64

Query: 68  KCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLLAFFQAL 127
           +CPKIL L L E+L+PMVECL++L   P E+A+AI KFP ILS+SVEEKLCPLLAFFQAL
Sbjct: 65  RCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQAL 124

Query: 128 GVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFLMGYSVD 187
           GVPE QLGKMIL NPRLISYSI++KL   V FLA +GL ++G+IGKVL KNPFLMGYSVD
Sbjct: 125 GVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVD 184

Query: 188 KRLRPTVEFLK-SIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDGEIVSL 247
           KRLRPT EFLK S+GL++  +++V + FP +LCRDV+K+L+ N DYL+  GF D +I ++
Sbjct: 185 KRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATM 244

Query: 248 VTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRLLKEKN 307
           VTGYP +LIKS+++SL+PRIRFLV++MGR ++EVA YP+FF HGLKKK+E R +L+K+ N
Sbjct: 245 VTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNN 304

Query: 308 VDFALSELLECNQKKFMMKMG 327
           +D +L E+L+CN KKF  K G
Sbjct: 305 IDCSLREMLDCNTKKFHEKFG 325

[Close]

BLAST of Cucsa.100000 vs. TAIR10
Match: AT1G78930.1 (AT1G78930.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 132.1 bits (331), Expect = 6.2e-31
Identity = 80/271 (29.52%), Postives = 146/271 (53.87%), Query Frame = 1


Query: 51  LERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSY 110
           +E++ +  +    ++ K P IL+  +QE    +     + S    +I  AI ++P +L  
Sbjct: 307 MEKVSVVNKDSGKLLLKYPWILSPSIQENYSHIGSFFYSESVLKMDIDHAIRRWPLLLGC 366

Query: 111 SVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVI 170
           S    +  ++  F  LGV +K++GK+I   P+L+    + + ++ V FL  +G  KE ++
Sbjct: 367 SASN-MEMMVKEFDKLGVRDKRMGKVIPKMPQLLLCKPQ-EFLKVVCFLEDLGFQKE-IV 426

Query: 171 GKVLAKNPFLMGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLD 230
           G++L + P + G S++K L+  + FL   G++      +  K+P+ L  D DK +   L 
Sbjct: 427 GQILCRCPEIFGCSIEKTLQKKLIFLTRFGVSTTHFPRIIKKYPEFLIYDADKTVLPRLK 486

Query: 231 YLRSRGFKDGEIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGL 290
           YL   G  + EI  ++  + P+L  SI   L P+  FLV  M + + EV EYP +F + L
Sbjct: 487 YLMEIGISEREIAFMIRKFSPILGYSIDKVLRPKFEFLVNSMEKPVREVIEYPRYFSYSL 546

Query: 291 KKKLELRHRLLKEKNVDFALSELLECNQKKF 322
           +K+++ R R+LK +N++  L E+L  N ++F
Sbjct: 547 EKRIKPRFRVLKGRNIECTLQEMLGKNDEEF 574

HSP 2 Score: 52.4 bits (124), Expect = 6.3e-07
Identity = 45/200 (22.50%), Postives = 89/200 (44.50%), Query Frame = 1


Query: 101 IAKFPGILSYSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLA 160
           +  FP +L  S E  + P++ F +++G+P+  LGK++LL P ++    E         + 
Sbjct: 249 LESFPRLLLLSEENDMKPMVEFLESIGIPKYCLGKVLLLYPPIMLGKTEEIKRRVATAME 308

Query: 161 GVGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRD 220
            V +  +   GK+L K P+++  S+ +       F  S  + KMD+     ++P +L   
Sbjct: 309 KVSVVNKD-SGKLLLKYPWILSPSIQENYSHIGSFFYSESVLKMDIDHAIRRWPLLLGCS 368

Query: 221 VDKVLRYNLDYLRSRGFKDGEIVSLVTGYPPVLIKSIQHSLE-----PRIRFLVEIMGRK 280
               +   +      G +D  +  ++   P +L+   Q  L+       + F  EI+G+ 
Sbjct: 369 ASN-MEMMVKEFDKLGVRDKRMGKVIPKMPQLLLCKPQEFLKVVCFLEDLGFQKEIVGQI 428

Query: 281 LEEVAEYPDFFKHGLKKKLE 296
           L      P+ F   ++K L+
Sbjct: 429 L---CRCPEIFGCSIEKTLQ 443

HSP 3 Score: 45.4 bits (106), Expect = 7.7e-05
Identity = 65/271 (23.99%), Postives = 111/271 (40.96%), Query Frame = 1


Query: 17  RDKGFDDRSIDKMFRKCRRLEDM--QNERASENWEYLERIGIQKRKLPSVVSKCPKILAL 76
           RD G  +   D +   C +   M  +  R  E W   +  G  +R              L
Sbjct: 82  RDTGLSEADSDFISSNCPKYTRMIVEGVRDLEEWNSWKGSGESERVEEG----------L 141

Query: 77  GLQEKLVPMVEC------LATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLLA------- 136
           G +EK++ MV+       +A L +    +++A+      L++ V  +  P+L        
Sbjct: 142 GFKEKVIYMVKQKGDGGKVAFLESLGLSLSSAM-----YLAHYVSSESLPILLDKVKYLK 201

Query: 137 --FFQALGVPEKQL-GKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGV--IGKV--- 196
             FF   G  EK L GK        +S  I+  + +T+ F   +   + G+  +G V   
Sbjct: 202 EIFFS--GSDEKGLVGKYARRMMLYLSIPIDEDVQQTLSFFEKIEARRGGLDMLGSVDAS 261

Query: 197 ----LAKNPFLMGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNL 256
               L   P L+  S +  ++P VEFL+SIG+ K  L  V L +P I+    +++ R   
Sbjct: 262 FRFLLESFPRLLLLSEENDMKPMVEFLESIGIPKYCLGKVLLLYPPIMLGKTEEIKRRVA 321

Query: 257 DYLRSRGFKDGEIVSLVTGYPPVLIKSIQHS 261
             +      + +   L+  YP +L  SIQ +
Sbjct: 322 TAMEKVSVVNKDSGKLLLKYPWILSPSIQEN 335

[Close]

BLAST of Cucsa.100000 vs. TAIR10
Match: AT2G21710.1 (AT2G21710.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 127.1 bits (318), Expect = 2.0e-29
Identity = 75/291 (25.77%), Postives = 148/291 (50.86%), Query Frame = 1


Query: 32  KCRRLEDMQNERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLS 91
           +C  L     E      ++  ++G+ +    ++V   PKI+     + +   +  L    
Sbjct: 304 RCPELLSFSMEEVKSRVDFFLKMGMNQNDFGTMVYDYPKIIGFFSFQVMEKKINYLKEFG 363

Query: 92  TKPHEIAAAIAKFPGILSYSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESK 151
               E+   +A  P ++  S+EE+  PL+ +F  LG+P++ + +++++ P L    +E  
Sbjct: 364 LSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKT 423

Query: 152 LVETVDFLAGVGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTVEFLKS-IGLNKMDLQAVA 211
           +   V FL  +G+  E  IG +L K P L+  S+ K++RP V FL +  G+ + D+  V 
Sbjct: 424 IAPKVRFLQEMGIPNE-AIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVI 483

Query: 212 LKFPDILCRDVDKVLRYNLDYLRSRGFKDGEIVSLVTGYPPVLIKSIQHSLEPRIRFLVE 271
              P +L   +   L  N+ Y  S G +  ++  ++  +P +L  ++  +L P+ R+L  
Sbjct: 484 AMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVD-NLRPKYRYLRR 543

Query: 272 IMGRKLEEVAEYPDFFKHGLKKKLELRHRLLKEKNVDFALSELLECNQKKF 322
            M R L+++ E+P FF + L++++  RH ++ E  V+F L  +L C  ++F
Sbjct: 544 TMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENRVNFKLRYMLACTDEEF 592

HSP 2 Score: 87.0 bits (214), Expect = 2.3e-17
Identity = 50/205 (24.39%), Postives = 111/205 (54.15%), Query Frame = 1


Query: 77  QEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLLAFFQALGVPEKQLGKM 136
           +E+L  +VE L +   +   +   + + P +LS+S+EE +   + FF  +G+ +   G M
Sbjct: 278 REELNEIVEYLESNGVRRDWMGYVVGRCPELLSFSMEE-VKSRVDFFLKMGMNQNDFGTM 337

Query: 137 ILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTVEFL 196
           +   P++I +     + + +++L   GL+ E V G++LA  P LMG S+++R +P V++ 
Sbjct: 338 VYDYPKIIGFFSFQVMEKKINYLKEFGLSTEEV-GRLLAYKPHLMGCSIEERWKPLVKYF 397

Query: 197 KSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDGEIVSLVTGYPPVLIKS 256
             +G+ K  ++ + +  P + C D++K +   + +L+  G  +  I +++  +P +L  S
Sbjct: 398 YYLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNS 457

Query: 257 IQHSLEPRIRFLVEIMGRKLEEVAE 282
           +   + P + FL+   G   +++ +
Sbjct: 458 LYKKIRPVVIFLLTRAGVTQKDIGK 480

[Close]

BLAST of Cucsa.100000 vs. TAIR10
Match: AT4G14605.1 (AT4G14605.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 125.2 bits (313), Expect = 7.6e-29
Identity = 85/316 (26.90%), Postives = 162/316 (51.27%), Query Frame = 1


Query: 19  KGFDDRSID-KMFRKCRRLEDMQNERASENWE-YLERIGIQKRKLPSVVSKCPKILALGL 78
           +G  D + D +  R   R+ ++  E A      YL  +G+   ++ ++  K        L
Sbjct: 169 RGDTDSAADTRKLRAVSRVSELDTEGALRPQTLYLLDLGLNLEQIKTITRKFAAFPYYSL 228

Query: 79  QEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLLAFFQALGVPEKQLGKM 138
             K+ P+VE L  L     +I   + K P I   S+ + L P +AF + LG+ + Q  K+
Sbjct: 229 DGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKI 288

Query: 139 ILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTVEFL 198
           I   P +++YS   KL  TV+FL+  GLT+E  IG++L + P +M YSV+ +LRPT+E+ 
Sbjct: 289 ISRFPAILTYS-RQKLTSTVEFLSQTGLTEE-QIGRILTRCPNIMSYSVEDKLRPTMEYF 348

Query: 199 KSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDGEIVSLVTGYPPVLIKS 258
           +S+    +D+  +  + P      ++  L+   ++   +GF   EI  +++ Y  +   S
Sbjct: 349 RSL---NVDVAVLLHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFS 408

Query: 259 IQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRLLKEKNVDFALSELLEC 318
           ++ ++ P+  +  + M     E+ ++P FF + L+++++ R+ L++   V   L+++L  
Sbjct: 409 LKENVMPKWDYF-QTMDYPKSELVKFPQFFGYSLQERIKPRYELVQRSGVRLLLNQVLSL 468

Query: 319 N-------QKKFMMKM 326
           +        KK MMK+
Sbjct: 469 SGIEFEKVVKKKMMKL 478

[Close]

BLAST of Cucsa.100000 vs. TAIR10
Match: AT5G55580.1 (AT5G55580.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 106.7 bits (265), Expect = 2.8e-23
Identity = 74/279 (26.52%), Postives = 138/279 (49.46%), Query Frame = 1


Query: 49  EYLERIGIQK--------RKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAA 108
           +YL   G+++        R +PS+     +I     QE+L    + L ++  K  +I   
Sbjct: 189 DYLSTFGLKESHFVQMYERHMPSL-----QINVFSAQERL----DYLLSVGVKHRDIKRM 248

Query: 109 IAKFPGILSYSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLA 168
           + + P IL Y+VE  L   ++F   LG+P  ++G+++   P L SYS+E+ L  T+ +L 
Sbjct: 249 LLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPTIRYLI 308

Query: 169 GVGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTVEFL-KSIGLNKMDLQAVALKFPDILCR 228
                KE  +GKV+  +P ++   +D        FL K +G  +  +  +  K P +L  
Sbjct: 309 EEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHY 368

Query: 229 DVDKVLRYNLDYLRSRGFKDGEIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEV 288
            +D      +++LRS G  + +I+ ++T    VL  S++ +L+P+  +LV  +  ++  +
Sbjct: 369 SIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHIL 428

Query: 289 AEYPDFFKHGLKKKLELRHRLL----KEKNVDFALSELL 315
            +YP +    L +++  RHR L    K +   F LS L+
Sbjct: 429 TKYPMYLSLSLDQRIRPRHRFLVELKKVRKGPFPLSSLV 458

HSP 2 Score: 62.0 bits (149), Expect = 7.9e-10
Identity = 44/161 (27.33%), Postives = 81/161 (50.31%), Query Frame = 1


Query: 139 LNPRLIS-YSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFLM--GYSVDKRLRPTVEF 198
           L PRL     I+ K V  +D+L+  GL +   +       P L    +S  +RL    ++
Sbjct: 170 LYPRLAEEIDIDPKCVPLLDYLSTFGLKESHFVQMYERHMPSLQINVFSAQERL----DY 229

Query: 199 LKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDGEIVSLVTGYPPVLIK 258
           L S+G+   D++ + L+ P IL   V+  L+ ++ +L   G  + +I  +V   P +   
Sbjct: 230 LLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFSY 289

Query: 259 SIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLEL 297
           S+++SL P IR+L+E +G K  +V +        L ++L++
Sbjct: 290 SVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDI 326

[Close]

BLAST of Cucsa.100000 vs. NCBI nr
Match: gi|449453646|ref|XP_004144567.1| (PREDICTED: uncharacterized protein LOC101218706 [Cucumis sativus])

HSP 1 Score: 649.8 bits (1675), Expect = 2.5e-183
Identity = 328/328 (100.00%), Postives = 328/328 (100.00%), Query Frame = 1


Query: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60
           MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK
Sbjct: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180
           AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL
Sbjct: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180

Query: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240
           MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG
Sbjct: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240

Query: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300
           EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL
Sbjct: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300

Query: 301 LKEKNVDFALSELLECNQKKFMMKMGLL 329
           LKEKNVDFALSELLECNQKKFMMKMGLL
Sbjct: 301 LKEKNVDFALSELLECNQKKFMMKMGLL 328

[Close]

BLAST of Cucsa.100000 vs. NCBI nr
Match: gi|659100596|ref|XP_008451174.1| (PREDICTED: mTERF domain-containing protein 1, mitochondrial [Cucumis melo])

HSP 1 Score: 637.1 bits (1642), Expect = 1.7e-179
Identity = 321/328 (97.87%), Postives = 324/328 (98.78%), Query Frame = 1


Query: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60
           MESSAS+NGNCMLWFFRDKGFDDRSIDKMFRKCRRLED QNERASENWEYLERIGIQKRK
Sbjct: 1   MESSASQNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDTQNERASENWEYLERIGIQKRK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180
           AFFQALGVPEK LGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL
Sbjct: 121 AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180

Query: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240
           MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLR NLDYLRSRGFKDG
Sbjct: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRSNLDYLRSRGFKDG 240

Query: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300
           EIVS+VTGYPPVLIKSIQHSLEPRIRFLVEIMGRKL+EVAEYPDFFKHGLKKKLELRHRL
Sbjct: 241 EIVSMVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPDFFKHGLKKKLELRHRL 300

Query: 301 LKEKNVDFALSELLECNQKKFMMKMGLL 329
           LKEKNVDF LSELLECNQKKFMMKMGLL
Sbjct: 301 LKEKNVDFTLSELLECNQKKFMMKMGLL 328

[Close]

BLAST of Cucsa.100000 vs. NCBI nr
Match: gi|590689062|ref|XP_007043122.1| (Mitochondrial transcription termination factor family protein [Theobroma cacao])

HSP 1 Score: 504.2 bits (1297), Expect = 1.7e-139
Identity = 244/327 (74.62%), Postives = 291/327 (88.99%), Query Frame = 1


Query: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60
           ME ++S+NG+ ++WFFRDKGFDD+SI++MFRKC+RL+ +Q ERASENW YL+ IGIQ+RK
Sbjct: 1   MEVASSQNGSSIMWFFRDKGFDDKSINEMFRKCKRLQGVQKERASENWAYLKSIGIQERK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120
           LPSVVS+CPKIL LGL EKLVPMVECLATL TK HE+A+AIA+FP I+S+SVEEKLCPLL
Sbjct: 61  LPSVVSRCPKILTLGLNEKLVPMVECLATLGTKRHEVASAIARFPHIISHSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180
           AFFQALGVPEKQLGKMILLNPRLISYSIESKL E VDFLA +GLT+EG+IGKVL+K PF+
Sbjct: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLTEIVDFLATLGLTREGMIGKVLSKYPFI 180

Query: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240
           MGYSVDKRLRPT EFLKS+GL++ DLQ VA+ FP++LCRDV K+LR N  YL   GF D 
Sbjct: 181 MGYSVDKRLRPTSEFLKSVGLSETDLQTVAMNFPEVLCRDVRKILRPNFAYLERCGFGDR 240

Query: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300
           E  +LV GYPP+LIKSI++SLEPRIRFLVE+MGR++EEVA YPDFF+HGLKK+LELRHRL
Sbjct: 241 EKAALVAGYPPILIKSIKNSLEPRIRFLVEVMGRQIEEVANYPDFFRHGLKKRLELRHRL 300

Query: 301 LKEKNVDFALSELLECNQKKFMMKMGL 328
           LKEK+V  +LSE+L+CN KKF++K GL
Sbjct: 301 LKEKDVTCSLSEMLDCNHKKFLLKFGL 327

[Close]

BLAST of Cucsa.100000 vs. NCBI nr
Match: gi|728847896|gb|KHG27339.1| (mTERF domain-containing 1, mitochondrial [Gossypium arboreum])

HSP 1 Score: 496.5 bits (1277), Expect = 3.6e-137
Identity = 236/327 (72.17%), Postives = 293/327 (89.60%), Query Frame = 1


Query: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60
           M+ ++ +NG  ++WFFRDKGFDD+SI++MF+KC+RL+ +  ERASENW YL+ IGIQ+RK
Sbjct: 1   MDVTSCQNGGSIMWFFRDKGFDDKSINEMFKKCKRLQGVHKERASENWSYLKSIGIQERK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILALGL EKLVPMVECLATL TK  E+A+AIA+FP I+S+SVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILALGLYEKLVPMVECLATLGTKRREVASAIARFPQIVSHSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180
           AFFQALGV E+QLGKMILLNPRLISYSIESKL + V+FLA +GLT+EG+IGKVLAK PF+
Sbjct: 121 AFFQALGVSERQLGKMILLNPRLISYSIESKLTDIVNFLATLGLTREGMIGKVLAKYPFI 180

Query: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240
           MGY+V+KRLRPT EFLKS+GL+K DLQ V + FP++LCRDVDK+LR N  YL+  GF+D 
Sbjct: 181 MGYNVNKRLRPTTEFLKSVGLSKTDLQIVTMNFPEVLCRDVDKILRPNFAYLKRSGFEDR 240

Query: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300
           +I +LVTGYPP+LIKSI++SLEPRI+FLVE+MGR+++EVA YPDFF+HGLKK++ELRHRL
Sbjct: 241 QIAALVTGYPPILIKSIKNSLEPRIKFLVEVMGRQIDEVANYPDFFRHGLKKRVELRHRL 300

Query: 301 LKEKNVDFALSELLECNQKKFMMKMGL 328
           LKEK+V+ +LSE+L+CNQKKF++K GL
Sbjct: 301 LKEKDVNCSLSEMLDCNQKKFLLKFGL 327

[Close]

BLAST of Cucsa.100000 vs. NCBI nr
Match: gi|470107525|ref|XP_004290095.1| (PREDICTED: uncharacterized protein LOC101310477 [Fragaria vesca subsp. vesca])

HSP 1 Score: 494.2 bits (1271), Expect = 1.8e-136
Identity = 236/329 (71.73%), Postives = 289/329 (87.84%), Query Frame = 1


Query: 1   MESSASRNGNC-MLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKR 60
           ME+S ++NG+  ++WFFRDKGFDD+SI +MF+KC+RLE+M  E ASENW YLE IGIQ+R
Sbjct: 1   METSTTQNGSSGIMWFFRDKGFDDKSISEMFKKCKRLENMNRESASENWAYLESIGIQER 60

Query: 61  KLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPL 120
           KLPSVVSKCPKIL LGL EKLVP VECLATL TKP E+A+AIAKFP ILS+SVEEKLCPL
Sbjct: 61  KLPSVVSKCPKILTLGLHEKLVPTVECLATLGTKPREVASAIAKFPHILSHSVEEKLCPL 120

Query: 121 LAFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPF 180
           LAFF+ALGVP+KQLGKMILLNPRLISYSI++KL + VDFLA +GL ++G+IGKVL KNPF
Sbjct: 121 LAFFEALGVPQKQLGKMILLNPRLISYSIDTKLKDIVDFLADLGLARDGMIGKVLVKNPF 180

Query: 181 LMGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKD 240
           +MGYSVDKRLRPT EFLKS GL +  +Q VA+ FP++LCRDVDK+LR N D+L+  GF+D
Sbjct: 181 IMGYSVDKRLRPTAEFLKSFGLTEQGIQTVAIHFPEVLCRDVDKILRPNFDFLKRSGFED 240

Query: 241 GEIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHR 300
           G+I +LVTGYPP+LIKSI +SLEPRI+FLVE+MGR+++EV +YPDFF+HGLKKK+E RH+
Sbjct: 241 GQIAALVTGYPPILIKSIHNSLEPRIKFLVEVMGRRIDEVTDYPDFFRHGLKKKVERRHK 300

Query: 301 LLKEK-NVDFALSELLECNQKKFMMKMGL 328
           LLK+K   D +LSE+L+CNQKKF++K GL
Sbjct: 301 LLKQKTTTDCSLSEMLDCNQKKFLLKFGL 329

The following BLAST results are available for this feature:

BLAST of Cucsa.100000 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MTEF6_ARATH	4.0e-120	64.80	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]
MTEF2_ARATH	3.6e-28	25.77	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana G...	[more]
MTEF5_ARATH	1.3e-27	26.90	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana G...	[more]
MTEF9_ARATH	5.0e-22	26.52	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana G...	[more]
MTEF1_ARATH	3.6e-20	27.64	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana GN...	[more]

BLAST of Cucsa.100000 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K108_CUCSA	1.8e-183	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G029940 PE=4 SV=1	[more]
A0A061E9I9_THECC	1.2e-139	74.62	Mitochondrial transcription termination factor family protein OS=Theobroma cacao...	[more]
A0A0B0PSD9_GOSAR	2.5e-137	72.17	mTERF domain-containing 1, mitochondrial OS=Gossypium arboreum GN=F383_08997 PE=...	[more]
A0A067LEZ1_JATCU	2.7e-136	70.73	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10773 PE=4 SV=1	[more]
A0A0D2VA23_GOSRA	1.4e-135	71.56	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G065400 PE=4 SV=1	[more]

BLAST of Cucsa.100000 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38160.3	2.2e-121	64.80	Mitochondrial transcription termination factor family protein	[more]
AT1G78930.1	6.2e-31	29.52	Mitochondrial transcription termination factor family protein	[more]
AT2G21710.1	2.0e-29	25.77	Mitochondrial transcription termination factor family protein	[more]
AT4G14605.1	7.6e-29	26.90	Mitochondrial transcription termination factor family protein	[more]
AT5G55580.1	2.8e-23	26.52	Mitochondrial transcription termination factor family protein	[more]

BLAST of Cucsa.100000 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449453646\|ref\|XP_004144567.1\|	2.5e-183	100.00	PREDICTED: uncharacterized protein LOC101218706 [Cucumis sativus]	[more]
gi\|659100596\|ref\|XP_008451174.1\|	1.7e-179	97.87	PREDICTED: mTERF domain-containing protein 1, mitochondrial [Cucumis melo]	[more]
gi\|590689062\|ref\|XP_007043122.1\|	1.7e-139	74.62	Mitochondrial transcription termination factor family protein [Theobroma cacao]	[more]
gi\|728847896\|gb\|KHG27339.1\|	3.6e-137	72.17	mTERF domain-containing 1, mitochondrial [Gossypium arboreum]	[more]
gi\|470107525\|ref\|XP_004290095.1\|	1.8e-136	71.73	PREDICTED: uncharacterized protein LOC101310477 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003690	MTERF

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003690	double-stranded DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003690	double-stranded DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.100000.1	Cucsa.100000.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 122..321 score: 6.6E-43coord: 12..169 score: 6.7
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 98..129 score: 4.8E-4coord: 276..307 score: 4.1coord: 171..202 score: 8.9E-8coord: 62..93 score: 19.0coord: 27..57 score: 670.0coord: 134..165 score: 4.8E-4coord: 207..238 score: 0.2coord: 243..275 score:
None	No IPR available	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 1..325 score: 5.7E
None	No IPR available	PANTHER	PTHR13068:SF5	MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN	coord: 1..325 score: 5.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.100000	Cla015718	Watermelon (97103) v1	cgywmB130
Cucsa.100000	Csa6G117190	Cucumber (Chinese Long) v2	cgycuB110
Cucsa.100000	Csa7G029940	Cucumber (Chinese Long) v2	cgycuB111
Cucsa.100000	MELO3C015685	Melon (DHL92) v3.5.1	cgymeB122
Cucsa.100000	ClCG02G003170	Watermelon (Charleston Gray)	cgywcgB130
Cucsa.100000	ClCG02G010730	Watermelon (Charleston Gray)	cgywcgB131
Cucsa.100000	CSPI06G09530	Wild cucumber (PI 183967)	cgycpiB111
Cucsa.100000	CSPI07G02370	Wild cucumber (PI 183967)	cgycpiB112
Cucsa.100000	CmaCh19G008260	Cucurbita maxima (Rimu)	cgycmaB0216
Cucsa.100000	CmoCh19G008430	Cucurbita moschata (Rifu)	cgycmoB0210
Cucsa.100000	Lsi11G013180	Bottle gourd (USVL1VR-Ls)	cgylsiB122
Cucsa.100000	Cp4.1LG15g06740	Cucurbita pepo (Zucchini)	cgycpeB0206
Cucsa.100000	MELO3C015685.2	Melon (DHL92) v3.6.1	cgymedB120
Cucsa.100000	CsaV3_6G009960	Cucumber (Chinese Long) v3	cgycucB115
Cucsa.100000	CsaV3_7G002240	Cucumber (Chinese Long) v3	cgycucB116
Cucsa.100000	Cla97C02G029690	Watermelon (97103) v2	cgywmbB125
Cucsa.100000	Cla97C02G036580	Watermelon (97103) v2	cgywmbB126
Cucsa.100000	Bhi05G001327	Wax gourd	cgywgoB145
Cucsa.100000	Carg04122	Silver-seed gourd	carcgyB0237

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cucsa.100000	Cucsa.120010	Cucumber (Gy14) v1	cgycgyB040

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.100000	Melon (DHL92) v3.6.1	cgymedB116
Cucsa.100000	Silver-seed gourd	carcgyB0405
Cucsa.100000	Silver-seed gourd	carcgyB0973
Cucsa.100000	Silver-seed gourd	carcgyB1182
Cucsa.100000	Silver-seed gourd	carcgyB1183
Cucsa.100000	Cucurbita maxima (Rimu)	cgycmaB0214
Cucsa.100000	Cucurbita maxima (Rimu)	cgycmaB0215
Cucsa.100000	Cucurbita maxima (Rimu)	cgycmaB0217
Cucsa.100000	Cucurbita maxima (Rimu)	cgycmaB0218
Cucsa.100000	Cucurbita moschata (Rifu)	cgycmoB0212
Cucsa.100000	Cucurbita moschata (Rifu)	cgycmoB0208
Cucsa.100000	Cucurbita moschata (Rifu)	cgycmoB0209
Cucsa.100000	Cucurbita moschata (Rifu)	cgycmoB0211
Cucsa.100000	Melon (DHL92) v3.5.1	cgymeB119
Cucsa.100000	Cucurbita pepo (Zucchini)	cgycpeB0207
Cucsa.100000	Cucurbita pepo (Zucchini)	cgycpeB0208
Cucsa.100000	Cucurbita pepo (Zucchini)	cgycpeB0209
Cucsa.100000	Cucurbita pepo (Zucchini)	cgycpeB0210
Cucsa.100000	Bottle gourd (USVL1VR-Ls)	cgylsiB121