Cp4.1LG15g02430 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG15g02430
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionChloroplast-targeted copper chaperone protein
LocationCp4.1LG15 : 2273787 .. 2275592 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGTGTTTAATTGAGTCTAGGGTTGACCTAGTATAAAATGGAAAATTGATAAAGAATTAGTGATGTGGACAGCCTTAATTGTGACATTCCAACTGTTCTCCAATTCCTTAAACATGTCTTTTCTCTCGGGCACATTGTCTGTCCAATTTAGCTCGGATCTTCACTACGACTACACTTTAAATGTCACTTTCGAGACCCGCAACTCTTTTGTTCGATACTTGAATATACTATTGACATGACTAAATTAAGATAAGGCTATAAAAGTTGGGAGAGGTCCGCTCCCCTCATGGATATATATAGCTCAATATGCCACTCCATCTCTGTAACGACCTAATCCCACTGCTAATAGATATTGTCCTCTTTGAACTTTTCTTTTCGGGCTTCCCCTCGTCTGTTAGGGAGAGGTTTCCATACCCTTATAAAAGGTGTTCCGTTTTAATCCACAACCGATCTGGGATATCACAATATCTCCAAGAAGCATGCCAAACAACTCGACTGTTCTAACATTGTTGTAAACTTTCTACCTAGTCCTGAGACGAAAGGTCGATAACCCTCGAGAAATGTTAATCCTTGCTTCAATTTGAACATGAAAACGCCCTCTAATTTTATACATGTGTGGTCCAACCAATCACCATCCAAACCCAAGAAAAAAGAAAGCACTAGAGAGCAATGTGCCATTTCTGCCACTCTCTCTATGATCGCCATTAACCTCTGAAAGAGACATCTTCAACAAATTCATATTATAAAGCAGCCTCTACCCTCATTTTCTTCAAACTCCACCATTAACCATGAAGAAACTAGGAGAATTCATGTGCCATTCTCCGGCCGCCACCGCAGTCTGCATCCCCGCCGATCCTCGGTCCGCAGTCGTGTCAAGAAGAAGCCTGGCTAGAGCCAACAGCCTTAAGAATGCCAATGCCAATGGCAACCGTGTGAGGTTTGTGAGCAATGCTGTGAAGTACTCCAAGCTTGGCAAGTCCCCGAGCACGGGAACGACGAACGACGTGAAGAAGCCGGTGACACTTATGCTTTCTTCGCCACCGCCCCCACCGGAGAATGTCTTCCATGTGGTGGTTATGAAGGTGGCGCTTCACTGCCAAGGTTGTGCTAGTAAAGTTAAGAGGCATCTCACCAAAATGGAAGGTAGAAAATCATATNACTTCTAATGTAGATTTAATGTGTGTCTATATATATATATATATATATATGTATGTATGTATGTATATATATGTATGTATGTATATATATGTATGCATGCATACATACATATATATGTATGTGTGTATGTGTTTATGTGTGTGTATATATATATGTATGTATTATATGTATGTATGTATGTATGCATACATACATATAATACATACATATAATACATACATACATATACATATATATATATATATATATGTATGTATATATATATATATTTGTATTATTTATAATGACCAATATTTTGAAAATTAAGAAAAAATTTAAATACTAAAAAGAAATATTTTTAAATTTTATTTTTGTGATTTGGAATTTGATTAAAAAATTAAAATTATAGTAAAAAATTGAAAAGAAATAAAACAATATTTAAAGGATAAAAAATAGGGATAAAAGGGCTAAAAAAGGAAATTTAAGGAAGAAAATGACATTTATTATTATTATTATTATTATCATTTACTAAAATTGTAACTGACAGGAGTGACGTCATTCAGCATAGATCTTGAGGCCAAGAGAGTGACTGTGATGGGACATATTTCACCGCTGGGTGTTTTGGAGAGTCTTTCTAAGGTGAAAAGAGCTGAGTTGTGGCTGTGA

mRNA sequence

ATGCCCCTCTACCCTCATTTTCTTCAAACTCCACCATTAACCATGAAGAAACTAGGAGAATTCATGTGCCATTCTCCGGCCGCCACCGCAGTCTGCATCCCCGCCGATCCTCGGTCCGCAGTCGTGTCAAGAAGAAGCCTGGCTAGAGCCAACAGCCTTAAGAATGCCAATGCCAATGGCAACCGTGTGAGGTTTGTGAGCAATGCTGTGAAGTACTCCAAGCTTGGCAAGTCCCCGAGCACGGGAACGACGAACGACGTGAAGAAGCCGGTGACACTTATGCTTTCTTCGCCACCGCCCCCACCGGAGAATGTCTTCCATGTGGTGGTTATGAAGGCCAAGAGAGTGACTGTGATGGGACATATTTCACCGCTGGGTGTTTTGGAGAGTCTTTCTAAGGTGAAAAGAGCTGAGTTGTGGCTGTGA

Coding sequence (CDS)

ATGCCCCTCTACCCTCATTTTCTTCAAACTCCACCATTAACCATGAAGAAACTAGGAGAATTCATGTGCCATTCTCCGGCCGCCACCGCAGTCTGCATCCCCGCCGATCCTCGGTCCGCAGTCGTGTCAAGAAGAAGCCTGGCTAGAGCCAACAGCCTTAAGAATGCCAATGCCAATGGCAACCGTGTGAGGTTTGTGAGCAATGCTGTGAAGTACTCCAAGCTTGGCAAGTCCCCGAGCACGGGAACGACGAACGACGTGAAGAAGCCGGTGACACTTATGCTTTCTTCGCCACCGCCCCCACCGGAGAATGTCTTCCATGTGGTGGTTATGAAGGCCAAGAGAGTGACTGTGATGGGACATATTTCACCGCTGGGTGTTTTGGAGAGTCTTTCTAAGGTGAAAAGAGCTGAGTTGTGGCTGTGA

Protein sequence

MPLYPHFLQTPPLTMKKLGEFMCHSPAATAVCIPADPRSAVVSRRSLARANSLKNANANGNRVRFVSNAVKYSKLGKSPSTGTTNDVKKPVTLMLSSPPPPPENVFHVVVMKAKRVTVMGHISPLGVLESLSKVKRAELWL
BLAST of Cp4.1LG15g02430 vs. TrEMBL
Match: A0A0A0K2I2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G060180 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 6.4e-26
Identity = 88/165 (53.33%), Postives = 99/165 (60.00%), Query Frame = 1

Query: 15  MKKLGEFMCHSPAATAVCIPADPRSAVVSRRSLARANSLKNANA-NGNR-VRFVS-NAVK 74
           MKKLG FMCHS A TAVCIP+DPRS VVSRR LAR +   N +A NGNR  RFVS N VK
Sbjct: 1   MKKLGGFMCHSAATTAVCIPSDPRSTVVSRR-LARPDYANNNHANNGNRSARFVSNNTVK 60

Query: 75  YSKLGKSP------STGTTNDVKKPVTLMLSSPPPPPENVFHVVVMK------------- 134
           YSKL +S       S G   ++KKP   ++ S P    NVFHVVVM+             
Sbjct: 61  YSKLVESSPSLSVRSEGKHINLKKPAMPVMLSSPAENNNVFHVVVMRVALHCQGCASKVK 120

Query: 135 -----------------AKRVTVMGHISPLGVLESLSKVKRAELW 141
                            AKRVTVMGHISPLGVL+S+SKVKRAELW
Sbjct: 121 RHLSRMEGVTSFSIDLEAKRVTVMGHISPLGVLQSISKVKRAELW 164

BLAST of Cp4.1LG15g02430 vs. TrEMBL
Match: W9SBC7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024139 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.8e-10
Identity = 67/206 (32.52%), Postives = 84/206 (40.78%), Query Frame = 1

Query: 13  LTMKKLGEFMCHSPAATAVCIPADPRSAVV-SRRSLARAN---SLKNANANGNRVRFVSN 72
           LT KK+G F CHS A+TAVC+  D RS +V  RRSL   N   +  +  +  +  R ++N
Sbjct: 4   LTKKKMGAFTCHSQASTAVCMTPDSRSVIVPGRRSLRERNITATTTSLASTFDNPRVLNN 63

Query: 73  AVKYS-----------------KLGKSPSTGTTNDVKKPVTLMLSS-------------- 132
             KYS                 KL  S +  T  D KK  +L L S              
Sbjct: 64  NAKYSRLVDHHHHHHRQDQLRTKLNISTNNSTLGDYKKSSSLFLPSIKRELALRNNNNVS 123

Query: 133 -------------PPPPPENVFHVVVMK------------------------------AK 141
                            P +VF VVVM+                               K
Sbjct: 124 HQQVGPLQKPSAILDSVPHHVFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIELETK 183

BLAST of Cp4.1LG15g02430 vs. TrEMBL
Match: A0A068TQ32_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00014823001 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-09
Identity = 58/159 (36.48%), Postives = 75/159 (47.17%), Query Frame = 1

Query: 21  FMCHSPAATAVCIPADPRSAVVSR-----RSLAR----ANSLKNANANGNRVRFVSNAVK 80
           FMC SPAATAVC+ ++P S +V R     R+LA      +S K++     R R    A  
Sbjct: 4   FMCQSPAATAVCMASEPLSVIVRRGPESDRTLAEHARLIDSTKHSRMVEPRARSRGLASA 63

Query: 81  YSKLGKSPSTGTTNDVKKPVTLMLSSPPPPPENVFHVVVMK------------------- 140
             +    PS G  N  +K     + S     + VF VVVM+                   
Sbjct: 64  TLRSAIVPSFGVENQPEKASRSQVVSSLAERDQVFQVVVMRVSLHCQGCAGKVKKHLSKM 123

BLAST of Cp4.1LG15g02430 vs. TrEMBL
Match: A5AZH6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043918 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-09
Identity = 63/163 (38.65%), Postives = 77/163 (47.24%), Query Frame = 1

Query: 14  TMKKLGEFMCHSPAATAVCIPADPRSAVVSR---RSLARANSLKNANANGNRV----RFV 73
           T KK+   MCHSPAATAVCIP DPRS +V R   R+L   + L N NA  +R+    RF 
Sbjct: 5   TSKKMRGLMCHSPAATAVCIPGDPRSVIVPRRPDRTLVDHSRLIN-NAKYSRLVESHRFT 64

Query: 74  SNA-----VKYSKLGKSPSTGTTNDVKKPVTLMLSSPPPPPENVFHVVVMK--------- 133
             A     V   K G  PS        +P+     S  P  ++VF VVVM+         
Sbjct: 65  PAAKRSVLVPAMKRGHRPSA-------EPMPFHPPSSTPSLDHVFQVVVMRVSLHCQGCA 124

Query: 134 ---------------------AKRVTVMGHISPLGVLESLSKV 135
                                 KRVTVMGH+SP GVLES+SK+
Sbjct: 125 GKVKKHLSKMEGVTSFSIDLETKRVTVMGHVSPSGVLESISKI 159

BLAST of Cp4.1LG15g02430 vs. TrEMBL
Match: F6H1N1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0055g00930 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-09
Identity = 66/169 (39.05%), Postives = 79/169 (46.75%), Query Frame = 1

Query: 22  MCHSPAATAVCIPADPRSAVVSR---RSLARANSLKNANANGNRV----RFVSNA----- 81
           MCHSPAATAVCIP DPRS +V R   R+L   + L N NA  +R+    RF   A     
Sbjct: 5   MCHSPAATAVCIPGDPRSVIVPRRPDRTLVDHSRLIN-NAKYSRLVESHRFTPAAKRSVL 64

Query: 82  VKYSKLGKSPSTGTTNDVKKPVTLMLSSPPPPPENVFH--------VVVMK--------- 141
           V   K G  PS        +P+     S  P  ++VF         VVVM+         
Sbjct: 65  VPAMKRGHRPSA-------EPMPFHPPSSTPSLDHVFQVRFMIICKVVVMRVSLHCQGCA 124

BLAST of Cp4.1LG15g02430 vs. NCBI nr
Match: gi|659111017|ref|XP_008455533.1| (PREDICTED: uncharacterized protein LOC103495684 [Cucumis melo])

HSP 1 Score: 137.1 bits (344), Expect = 2.4e-29
Identity = 90/163 (55.21%), Postives = 101/163 (61.96%), Query Frame = 1

Query: 15  MKKLGEFMCHSPAATAVCIPADPRSAVVSRRSLARANSLKNANA-NGNRVRFVSNAVKYS 74
           MKKLG F CHS A TAVCIPADPRSAVVSRR LARA+ + N +A NGNR R VSNAVKYS
Sbjct: 1   MKKLGGFTCHSAATTAVCIPADPRSAVVSRR-LARADYVNNNHANNGNRARLVSNAVKYS 60

Query: 75  KLGKSP------STGTTNDVKKPVTLMLSSPPPPPENVFHVVVMK--------------- 134
           KL +S       S G   ++KKP   ++ S P    NVFHVVVM+               
Sbjct: 61  KLVESSPSLSVRSEGKQINLKKPAMPVMLSSPAENNNVFHVVVMRVALHCQGCASKVKRH 120

Query: 135 ---------------AKRVTVMGHISPLGVLESLSKVKRAELW 141
                          AKRVTVMGHISPLGVL+S+SKVKRAELW
Sbjct: 121 LSKMEGVTSFSIDLEAKRVTVMGHISPLGVLQSISKVKRAELW 162

BLAST of Cp4.1LG15g02430 vs. NCBI nr
Match: gi|778724303|ref|XP_011658781.1| (PREDICTED: uncharacterized protein LOC105436087 [Cucumis sativus])

HSP 1 Score: 125.2 bits (313), Expect = 9.2e-26
Identity = 88/165 (53.33%), Postives = 99/165 (60.00%), Query Frame = 1

Query: 15  MKKLGEFMCHSPAATAVCIPADPRSAVVSRRSLARANSLKNANA-NGNR-VRFVS-NAVK 74
           MKKLG FMCHS A TAVCIP+DPRS VVSRR LAR +   N +A NGNR  RFVS N VK
Sbjct: 1   MKKLGGFMCHSAATTAVCIPSDPRSTVVSRR-LARPDYANNNHANNGNRSARFVSNNTVK 60

Query: 75  YSKLGKSP------STGTTNDVKKPVTLMLSSPPPPPENVFHVVVMK------------- 134
           YSKL +S       S G   ++KKP   ++ S P    NVFHVVVM+             
Sbjct: 61  YSKLVESSPSLSVRSEGKHINLKKPAMPVMLSSPAENNNVFHVVVMRVALHCQGCASKVK 120

Query: 135 -----------------AKRVTVMGHISPLGVLESLSKVKRAELW 141
                            AKRVTVMGHISPLGVL+S+SKVKRAELW
Sbjct: 121 RHLSRMEGVTSFSIDLEAKRVTVMGHISPLGVLQSISKVKRAELW 164

BLAST of Cp4.1LG15g02430 vs. NCBI nr
Match: gi|731410542|ref|XP_010657601.1| (PREDICTED: uncharacterized protein LOC100243595 [Vitis vinifera])

HSP 1 Score: 84.0 bits (206), Expect = 2.4e-13
Identity = 69/169 (40.83%), Postives = 83/169 (49.11%), Query Frame = 1

Query: 14  TMKKLGEFMCHSPAATAVCIPADPRSAVVSR---RSLARANSLKNANANGNRV----RFV 73
           T KK+   MCHSPAATAVCIP DPRS +V R   R+L   + L N NA  +R+    RF 
Sbjct: 5   TSKKMRGLMCHSPAATAVCIPGDPRSVIVPRRPDRTLVDHSRLIN-NAKYSRLVESHRFT 64

Query: 74  SNA-----VKYSKLGKSPSTGTTNDVKKPVTLMLSSPPPPPENVFHVVVMK--------- 133
             A     V   K G  PS        +P+     S  P  ++VF VVVM+         
Sbjct: 65  PAAKRSVLVPAMKRGHRPSA-------EPMPFHPPSSTPSLDHVFQVVVMRVSLHCQGCA 124

Query: 134 ---------------------AKRVTVMGHISPLGVLESLSKVKRAELW 141
                                 KRVTVMGH+SP GVLES+SKVK+AELW
Sbjct: 125 GKVKKHLSKMEGVTSFSIDLETKRVTVMGHVSPSGVLESISKVKKAELW 165

BLAST of Cp4.1LG15g02430 vs. NCBI nr
Match: gi|720042197|ref|XP_010269157.1| (PREDICTED: uncharacterized protein LOC104605904 [Nelumbo nucifera])

HSP 1 Score: 77.0 bits (188), Expect = 2.9e-11
Identity = 59/169 (34.91%), Postives = 80/169 (47.34%), Query Frame = 1

Query: 14  TMKKLGEFMCHSPAATAVCIPADPRSAVVSRRSLARANSLKNANANGNRVRFVSNAVKYS 73
           T KK+  FMC SP ATAVCIP DPRS +V RR   R++   +   N    R + +  +  
Sbjct: 5   TRKKMRGFMCQSPGATAVCIPGDPRSVIVPRRPAGRSSVDHSLFINSKYSRLIES--RKL 64

Query: 74  KLG----KSPSTGTTNDVKKPVTL--------MLSSPPPPPENVFHVVVMK--------- 133
            LG     +P    ++ +++   L         LS+     + VF VVVM+         
Sbjct: 65  PLGGDNRPAPPLSLSSSIQRERELERKSSNACSLSTALTSSDQVFQVVVMRVSLHCQGCA 124

Query: 134 ---------------------AKRVTVMGHISPLGVLESLSKVKRAELW 141
                                +KRVTVMGH+SP GVLES+SKVK+AE W
Sbjct: 125 GKVKKHLSKMEGVTSFSIDLESKRVTVMGHVSPAGVLESVSKVKKAEFW 171

BLAST of Cp4.1LG15g02430 vs. NCBI nr
Match: gi|1012101695|ref|XP_015957547.1| (PREDICTED: uncharacterized protein LOC107481753 [Arachis duranensis])

HSP 1 Score: 75.9 bits (185), Expect = 6.4e-11
Identity = 64/158 (40.51%), Postives = 81/158 (51.27%), Query Frame = 1

Query: 21  FMCHSPAATAVCIPA-DPRSAVVSRRSLARANSLKNANANGNRVRFVSNAVKYSKLGKSP 80
           FMCHS A+TAVC+   D RS VV RR   R+ SL ++         + N  KYSKLG+S 
Sbjct: 20  FMCHSQASTAVCMSTHDNRSVVVPRRP-DRSVSLDDSK--------LINPSKYSKLGESR 79

Query: 81  STGTTNDVK---KPVTLMLSSP----PPPPENVFHVVVMK-------------------- 140
                  +K   +    +++ P     PP ENVF VVVM+                    
Sbjct: 80  RFRPVPLIKQRGEDHVQVMNQPRELHKPPTENVFQVVVMRVAIHCQGCAGKVKKHLSKME 139

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K2I2_CUCSA6.4e-2653.33Uncharacterized protein OS=Cucumis sativus GN=Csa_7G060180 PE=4 SV=1[more]
W9SBC7_9ROSA3.8e-1032.52Uncharacterized protein OS=Morus notabilis GN=L484_024139 PE=4 SV=1[more]
A0A068TQ32_COFCA1.1e-0936.48Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00014823001 PE=4 SV=1[more]
A5AZH6_VITVI1.1e-0938.65Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043918 PE=4 SV=1[more]
F6H1N1_VITVI1.1e-0939.05Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0055g00930 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|659111017|ref|XP_008455533.1|2.4e-2955.21PREDICTED: uncharacterized protein LOC103495684 [Cucumis melo][more]
gi|778724303|ref|XP_011658781.1|9.2e-2653.33PREDICTED: uncharacterized protein LOC105436087 [Cucumis sativus][more]
gi|731410542|ref|XP_010657601.1|2.4e-1340.83PREDICTED: uncharacterized protein LOC100243595 [Vitis vinifera][more]
gi|720042197|ref|XP_010269157.1|2.9e-1134.91PREDICTED: uncharacterized protein LOC104605904 [Nelumbo nucifera][more]
gi|1012101695|ref|XP_015957547.1|6.4e-1140.51PREDICTED: uncharacterized protein LOC107481753 [Arachis duranensis][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0030001 metal ion transport
biological_process GO:0046916 cellular transition metal ion homeostasis
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003674 molecular_function
molecular_function GO:0046872 metal ion binding
molecular_function GO:0046914 transition metal ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g02430.1Cp4.1LG15g02430.1mRNA