Cucsa.217770 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.217770
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Chloroplast-targeted copper chaperone protein
Location	scaffold01658 : 22595 .. 23497 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGCTAGGTGGATTCATGTGCCACTCTGCTGCCACCACCGCAGTCTGCATCCCCTCCGATCCCCGCTCCACCGTTGTGTCAAGAAGGCTGGCTAGACCCGACTATGCTAATAATAATCATGCCAATAATGGCAACCGTAGTGCGAGGTTTGTGAGCAATAATACTGTGAAGTACTCGAAGCTTGTCGAATCATCTCCTAGTTTGAGTGTTCGGAGCGAGGGAAAGCATATCAATTTGAAGAAACCGGCCATGCCGGTTATGCTTTCTTCACCAGCGGAGAATAATAACGTCTTCCATGTGGTGGTTATGAGGGTGGCGCTTCACTGTCAAGGCTGTGCTAGTAAAGTTAAGAGACATCTCTCGAGAATGGAAGGTATTGTAAATCCATGCATATATTATTCATTATATAATCATTTCTATATATGATTACTATATATATAATAATGTTGTTAGTGATATCAAATTTCAATTAATTTCAACAAATAATAGAACTATATAAAAATTATCCAAATTGATAATTTTAACTGTTTTtCTATTATATTTAACTGCATGCAAAAGTTTCTCCTTTTGTAATATATATATATAATGTTTTtCATTGATTTTTAAAGGGGATTTCAAGTTTAGTAATTGCTAAAACTTAAATGAAAATTACATATATATATAATGAAAATTGAAGGATGAAAAAGGAATAGTTGAAGAATATAATGAATGAGAAATATAGAATTAATTGTGTTTGAATGTAATTTAAATTGAATATGGGAAAGGACAGGAGTGACGTCATTCAGCATAGATCTTGAGGCGAAGAGGGTGACTGTGATGGGACATATTTCACCGCTGGGTGTATTACAAAGCATTTCCAAGGTCAAGAGAGCTGAGTTATGGGCAACCCAAGCTTAG

mRNA sequence

ATGAAGAAGCTAGGTGGATTCATGTGCCACTCTGCTGCCACCACCGCAGTCTGCATCCCCTCCGATCCCCGCTCCACCGTTGTGTCAAGAAGGCTGGCTAGACCCGACTATGCTAATAATAATCATGCCAATAATGGCAACCGTAGTGCGAGGTTTGTGAGCAATAATACTGTGAAGTACTCGAAGCTTGTCGAATCATCTCCTAGTTTGAGTGTTCGGAGCGAGGGAAAGCATATCAATTTGAAGAAACCGGCCATGCCGGTTATGCTTTCTTCACCAGCGGAGAATAATAACGTCTTCCATGTGGTGGTTATGAGGGTGGCGCTTCACTGTCAAGGCTGTGCTAGTAAAGTTAAGAGACATCTCTCGAGAATGGAAGGAGTGACGTCATTCAGCATAGATCTTGAGGCGAAGAGGGTGACTGTGATGGGACATATTTCACCGCTGGGTGTATTACAAAGCATTTCCAAGGTCAAGAGAGCTGAGTTATGGGCAACCCAAGCTTAG

Coding sequence (CDS)

ATGAAGAAGCTAGGTGGATTCATGTGCCACTCTGCTGCCACCACCGCAGTCTGCATCCCCTCCGATCCCCGCTCCACCGTTGTGTCAAGAAGGCTGGCTAGACCCGACTATGCTAATAATAATCATGCCAATAATGGCAACCGTAGTGCGAGGTTTGTGAGCAATAATACTGTGAAGTACTCGAAGCTTGTCGAATCATCTCCTAGTTTGAGTGTTCGGAGCGAGGGAAAGCATATCAATTTGAAGAAACCGGCCATGCCGGTTATGCTTTCTTCACCAGCGGAGAATAATAACGTCTTCCATGTGGTGGTTATGAGGGTGGCGCTTCACTGTCAAGGCTGTGCTAGTAAAGTTAAGAGACATCTCTCGAGAATGGAAGGAGTGACGTCATTCAGCATAGATCTTGAGGCGAAGAGGGTGACTGTGATGGGACATATTTCACCGCTGGGTGTATTACAAAGCATTTCCAAGGTCAAGAGAGCTGAGTTATGGGCAACCCAAGCTTAG

Protein sequence

MKKLGGFMCHSAATTAVCIPSDPRSTVVSRRLARPDYANNNHANNGNRSARFVSNNTVKYSKLVESSPSLSVRSEGKHINLKKPAMPVMLSSPAENNNVFHVVVMRVALHCQGCASKVKRHLSRMEGVTSFSIDLEAKRVTVMGHISPLGVLQSISKVKRAELWATQA*

Homology

[Close]

BLAST of Cucsa.217770 vs. Swiss-Prot
Match: ATOX1_ARATH (Copper transport protein ATX1 OS=Arabidopsis thaliana GN=ATX1 PE=1 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 2.2e-10
Identity = 30/66 (45.45%), Postives = 46/66 (69.70%), Query Frame = 1


Query: 103 VVMRVALHCQGCASKVKRHLSRMEGVTSFSIDLEAKRVTVMGHISPLGVLQSISKV-KRA 162
           VV+RVA+ C+GC   VKR L +MEGV SF +D++ ++VTV G++ P  VLQ+++K  K+ 
Sbjct: 5   VVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKTGKKT 64

Query: 163 ELWATQ 168
             W  +
Sbjct: 65  AFWEAE 70

[Close]

BLAST of Cucsa.217770 vs. Swiss-Prot
Match: CCH_ARATH (Copper transport protein CCH OS=Arabidopsis thaliana GN=CCH PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.0e-10
Identity = 30/67 (44.78%), Postives = 44/67 (65.67%), Query Frame = 1


Query: 103 VVMRVALHCQGCASKVKRHLSRMEGVTSFSIDLEAKRVTVMGHISPLGVLQSISKV-KRA 162
           VV++V + CQGC   V R L +MEGV SF ID++ ++VTV G++ P  V Q++SK  K+ 
Sbjct: 5   VVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKTGKKT 64

Query: 163 ELWATQA 169
             W  +A
Sbjct: 65  SYWPVEA 71

[Close]

BLAST of Cucsa.217770 vs. Swiss-Prot
Match: HIP20_ARATH (Heavy metal-associated isoprenylated plant protein 20 OS=Arabidopsis thaliana GN=HIPP20 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.4e-06
Identity = 25/67 (37.31%), Postives = 41/67 (61.19%), Query Frame = 1


Query: 99  VFHVVVMRVALHCQGCASKVKRHLSRMEGVTSFSIDLEAKRVTVMGHISPLGVLQSISKV 158
           V   V ++V + C GC  +VK  +S M+GV S  ++ +  +VTV G++ P  VL+ I + 
Sbjct: 26  VMQTVNIKVKMDCDGCERRVKNAVSSMKGVKSVEVNRKIHKVTVSGYVEPKKVLKRIERT 85

Query: 159 -KRAELW 165
            K+AE+W
Sbjct: 86  GKKAEIW 92

[Close]

BLAST of Cucsa.217770 vs. TrEMBL
Match: A0A0A0K2I2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G060180 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 4.9e-89
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1


Query: 1   MKKLGGFMCHSAATTAVCIPSDPRSTVVSRRLARPDYANNNHANNGNRSARFVSNNTVKY 60
           MKKLGGFMCHSAATTAVCIPSDPRSTVVSRRLARPDYANNNHANNGNRSARFVSNNTVKY
Sbjct: 1   MKKLGGFMCHSAATTAVCIPSDPRSTVVSRRLARPDYANNNHANNGNRSARFVSNNTVKY 60

Query: 61  SKLVESSPSLSVRSEGKHINLKKPAMPVMLSSPAENNNVFHVVVMRVALHCQGCASKVKR 120
           SKLVESSPSLSVRSEGKHINLKKPAMPVMLSSPAENNNVFHVVVMRVALHCQGCASKVKR
Sbjct: 61  SKLVESSPSLSVRSEGKHINLKKPAMPVMLSSPAENNNVFHVVVMRVALHCQGCASKVKR 120

Query: 121 HLSRMEGVTSFSIDLEAKRVTVMGHISPLGVLQSISKVKRAELWATQA 169
           HLSRMEGVTSFSIDLEAKRVTVMGHISPLGVLQSISKVKRAELWATQA
Sbjct: 121 HLSRMEGVTSFSIDLEAKRVTVMGHISPLGVLQSISKVKRAELWATQA 168

[Close]

BLAST of Cucsa.217770 vs. TrEMBL
Match: V7CNZ1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G207200g PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.7e-36
Identity = 92/163 (56.44%), Postives = 114/163 (69.94%), Query Frame = 1


Query: 6   GFMCHSAATTAVCIPS-DPRSTVVSRRLARPDYANNNHANNGNRSARFVSNNTVKYSKLV 65
           GFMCHS A+TAVC+ + DPR  VV +RL R  + ++          R +  N  KYSKLV
Sbjct: 14  GFMCHSQASTAVCMSTRDPRPVVVPKRLERSVFLDDT---------RLI--NYAKYSKLV 73

Query: 66  E---SSPSLSVRSEGKHINLKKPAMPVMLSSPAENNNVFHVVVMRVALHCQGCASKVKRH 125
           E   S+P   ++  G+  +  K     +L +  +NN VF VVVMRVA+HCQGCA KVK+H
Sbjct: 74  EPPRSNPVPKIKLRGQDQDQAKNEPRELLKTQTDNN-VFQVVVMRVAIHCQGCAGKVKKH 133

Query: 126 LSRMEGVTSFSIDLEAKRVTVMGHISPLGVLQSISKVKRAELW 165
           LS+MEGVTSFSIDLE+KRVTVMGHISP+ VL+SISKVKRAELW
Sbjct: 134 LSKMEGVTSFSIDLESKRVTVMGHISPVAVLESISKVKRAELW 164

[Close]

BLAST of Cucsa.217770 vs. TrEMBL
Match: A0A151T231_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_023554 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.7e-36
Identity = 91/165 (55.15%), Postives = 113/165 (68.48%), Query Frame = 1


Query: 6   GFMCHSAATTAVCIPS-DPRSTVVSRRLARPDYANNNHANNGNRSARFVSNNTVKYSKLV 65
           GFMCHS A+TAVC+ + DPRS VV RRL R  + ++          R +  N  KYSKLV
Sbjct: 13  GFMCHSQASTAVCMSTRDPRSVVVPRRLDRSVFLDDT---------RLI--NYAKYSKLV 72

Query: 66  ESS-----PSLSVRSEGKHINLKKPAMPVMLSSPAENNNVFHVVVMRVALHCQGCASKVK 125
           E       P +  R + +   ++   +   L++   NNNVF VVVMRVA+HCQGCA KVK
Sbjct: 73  EPPRSNPVPKIKFRGQDQDQAIEPRELQKTLTN---NNNVFQVVVMRVAIHCQGCAGKVK 132

Query: 126 RHLSRMEGVTSFSIDLEAKRVTVMGHISPLGVLQSISKVKRAELW 165
           +HLS+MEGVTSFSID+E+KRVTVMGHISP+ VL+SISKVKRAE W
Sbjct: 133 KHLSKMEGVTSFSIDVESKRVTVMGHISPVAVLESISKVKRAEFW 163

[Close]

BLAST of Cucsa.217770 vs. TrEMBL
Match: A0A0S3R048_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G156700 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.1e-35
Identity = 92/162 (56.79%), Postives = 110/162 (67.90%), Query Frame = 1


Query: 6   GFMCHSAATTAVCIPS-DPRSTVVSRRLARPDYANNNHANNGNRSARFVSNNTVKYSKLV 65
           GFMCHS A+TAVC+ + DPRS V+ +RL R  + ++          R +  N  KYSKLV
Sbjct: 13  GFMCHSQASTAVCMSTRDPRSVVLPKRLERTVFLDDT---------RLI--NYAKYSKLV 72

Query: 66  ESSPSLSVRSEGKHINLKKPA--MPVMLSSPAENNNVFHVVVMRVALHCQGCASKVKRHL 125
           E   S  V      +  +  A   P  L     +NNVF VVVMRVA+HCQGCA KVK+HL
Sbjct: 73  EPPRSNPVPKIKLRVQDQDQAKNQPKDLLKTQTDNNVFQVVVMRVAIHCQGCAVKVKKHL 132

Query: 126 SRMEGVTSFSIDLEAKRVTVMGHISPLGVLQSISKVKRAELW 165
           S+MEGVTSFSIDLE+KRVTVMGHISP+ VL+SISKVKRAELW
Sbjct: 133 SKMEGVTSFSIDLESKRVTVMGHISPVAVLESISKVKRAELW 163

[Close]

BLAST of Cucsa.217770 vs. TrEMBL
Match: A0A0L9TMD1_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g087400 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.1e-35
Identity = 92/162 (56.79%), Postives = 110/162 (67.90%), Query Frame = 1


Query: 6   GFMCHSAATTAVCIPS-DPRSTVVSRRLARPDYANNNHANNGNRSARFVSNNTVKYSKLV 65
           GFMCHS A+TAVC+ + DPRS V+ +RL R  + ++          R +  N  KYSKLV
Sbjct: 13  GFMCHSQASTAVCMSTRDPRSVVLPKRLERTVFLDDT---------RLI--NYAKYSKLV 72

Query: 66  ESSPSLSVRSEGKHINLKKPA--MPVMLSSPAENNNVFHVVVMRVALHCQGCASKVKRHL 125
           E   S  V      +  +  A   P  L     +NNVF VVVMRVA+HCQGCA KVK+HL
Sbjct: 73  EPPRSNPVPKIKLRVQDQDQAKNQPKDLLKTQTDNNVFQVVVMRVAIHCQGCAVKVKKHL 132

Query: 126 SRMEGVTSFSIDLEAKRVTVMGHISPLGVLQSISKVKRAELW 165
           S+MEGVTSFSIDLE+KRVTVMGHISP+ VL+SISKVKRAELW
Sbjct: 133 SKMEGVTSFSIDLESKRVTVMGHISPVAVLESISKVKRAELW 163

[Close]

BLAST of Cucsa.217770 vs. TAIR10
Match: AT5G02600.2 (AT5G02600.2 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 96.3 bits (238), Expect = 1.9e-20
Identity = 44/74 (59.46%), Postives = 60/74 (81.08%), Query Frame = 1


Query: 91  SSPAENNNVFHVVVMRVALHCQGCASKVKRHLSRMEGVTSFSIDLEAKRVTVMGHISPLG 150
           S P +N++   VVV+RV+LHC+GCA KVK+HLS+++GVTS++ID  AK+VTV G ++PL 
Sbjct: 240 SPPEKNSSSDQVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLT 299

Query: 151 VLQSISKVKRAELW 165
           VL SISKVK A+ W
Sbjct: 300 VLASISKVKNAQFW 313

[Close]

BLAST of Cucsa.217770 vs. TAIR10
Match: AT2G28660.1 (AT2G28660.1 Chloroplast-targeted copper chaperone protein)

HSP 1 Score: 94.4 bits (233), Expect = 7.4e-20
Identity = 43/79 (54.43%), Postives = 66/79 (83.54%), Query Frame = 1


Query: 90  LSSPAENNNVFHVVVMRVALHCQGCASKVKRHLSRMEGVTSFSIDLEAKRVTVMGHISPL 149
           +SSPA + +   VVV+RV++HC+GC  KV++H+S+MEGVTS++IDL  K+VTV+G I+P+
Sbjct: 173 VSSPAPSTDD-QVVVLRVSIHCKGCEGKVRKHISKMEGVTSYTIDLATKKVTVVGKITPV 232

Query: 150 GVLQSISKVKRAELWATQA 169
           G+++SISKVK A+LW + +
Sbjct: 233 GLVESISKVKFAQLWPSSS 250

[Close]

BLAST of Cucsa.217770 vs. TAIR10
Match: AT2G37390.1 (AT2G37390.1 Chloroplast-targeted copper chaperone protein)

HSP 1 Score: 90.1 bits (222), Expect = 1.4e-18
Identity = 40/63 (63.49%), Postives = 53/63 (84.13%), Query Frame = 1


Query: 102 VVVMRVALHCQGCASKVKRHLSRMEGVTSFSIDLEAKRVTVMGHISPLGVLQSISKVKRA 161
           VVV++V+LHC+GC  KV++HL+RM+GVTSF+ID  AK+VTV G I+PL +L SISKVK A
Sbjct: 182 VVVLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGDITPLEILDSISKVKNA 241

Query: 162 ELW 165
           + W
Sbjct: 242 QFW 244

[Close]

BLAST of Cucsa.217770 vs. TAIR10
Match: AT3G24450.1 (AT3G24450.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 82.0 bits (201), Expect = 3.8e-16
Identity = 44/126 (34.92%), Postives = 75/126 (59.52%), Query Frame = 1


Query: 47  NRSARFVSNNTVKYSKLVESSPSL--SVRSEGKHINLKKPAMPVMLSSPAENNNVFH--- 106
           N+ + F  N      +  E  P +  S    GK + LK      ++++       FH   
Sbjct: 19  NQCSCFCLNTLGDEEEEFEKEPLIDSSTEKSGKVMRLKD-----VVAADHRQTLAFHLKP 78

Query: 107 -VVVMRVALHCQGCASKVKRHLSRMEGVTSFSIDLEAKRVTVMGHISPLGVLQSISKVKR 166
            +V ++V++HC GCA KV++H+S+++GVT + ++LE+K+V V G+I P+ VL+SI KVK 
Sbjct: 79  KIVELKVSMHCYGCAKKVEKHISKLDGVTWYKVELESKKVVVKGNILPVDVLESICKVKN 138

[Close]

BLAST of Cucsa.217770 vs. TAIR10
Match: AT3G53530.2 (AT3G53530.2 Chloroplast-targeted copper chaperone protein)

HSP 1 Score: 79.3 bits (194), Expect = 2.5e-15
Identity = 42/81 (51.85%), Postives = 56/81 (69.14%), Query Frame = 1


Query: 87  PVMLSSPAENNNVFHVVVMRVALHC--QGCASKVKRHLSRME-GVTSFSIDLEAKRVTVM 146
           PV     +  +    VVV+RV+LHC  +GC  KVK+HLS+M+ GVTSF+ID  +K+VTV 
Sbjct: 154 PVEEKKKSSGSGSDQVVVLRVSLHCHCRGCQGKVKKHLSKMQVGVTSFNIDFASKKVTVT 213

Query: 147 GHISPLGVLQSISKVKRAELW 165
           G I+PL VL  +SKVK A+ W
Sbjct: 214 GDITPLEVLGCLSKVKNAQFW 234

[Close]

BLAST of Cucsa.217770 vs. NCBI nr
Match: gi|778724303|ref|XP_011658781.1| (PREDICTED: uncharacterized protein LOC105436087 [Cucumis sativus])

HSP 1 Score: 335.1 bits (858), Expect = 7.0e-89
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1


Query: 1   MKKLGGFMCHSAATTAVCIPSDPRSTVVSRRLARPDYANNNHANNGNRSARFVSNNTVKY 60
           MKKLGGFMCHSAATTAVCIPSDPRSTVVSRRLARPDYANNNHANNGNRSARFVSNNTVKY
Sbjct: 1   MKKLGGFMCHSAATTAVCIPSDPRSTVVSRRLARPDYANNNHANNGNRSARFVSNNTVKY 60

Query: 61  SKLVESSPSLSVRSEGKHINLKKPAMPVMLSSPAENNNVFHVVVMRVALHCQGCASKVKR 120
           SKLVESSPSLSVRSEGKHINLKKPAMPVMLSSPAENNNVFHVVVMRVALHCQGCASKVKR
Sbjct: 61  SKLVESSPSLSVRSEGKHINLKKPAMPVMLSSPAENNNVFHVVVMRVALHCQGCASKVKR 120

Query: 121 HLSRMEGVTSFSIDLEAKRVTVMGHISPLGVLQSISKVKRAELWATQA 169
           HLSRMEGVTSFSIDLEAKRVTVMGHISPLGVLQSISKVKRAELWATQA
Sbjct: 121 HLSRMEGVTSFSIDLEAKRVTVMGHISPLGVLQSISKVKRAELWATQA 168

[Close]

BLAST of Cucsa.217770 vs. NCBI nr
Match: gi|659111017|ref|XP_008455533.1| (PREDICTED: uncharacterized protein LOC103495684 [Cucumis melo])

HSP 1 Score: 300.1 bits (767), Expect = 2.5e-78
Identity = 155/167 (92.81%), Postives = 157/167 (94.01%), Query Frame = 1


Query: 1   MKKLGGFMCHSAATTAVCIPSDPRSTVVSRRLARPDYANNNHANNGNRSARFVSNNTVKY 60
           MKKLGGF CHSAATTAVCIP+DPRS VVSRRLAR DY NNNHANNGNR AR VSN  VKY
Sbjct: 1   MKKLGGFTCHSAATTAVCIPADPRSAVVSRRLARADYVNNNHANNGNR-ARLVSN-AVKY 60

Query: 61  SKLVESSPSLSVRSEGKHINLKKPAMPVMLSSPAENNNVFHVVVMRVALHCQGCASKVKR 120
           SKLVESSPSLSVRSEGK INLKKPAMPVMLSSPAENNNVFHVVVMRVALHCQGCASKVKR
Sbjct: 61  SKLVESSPSLSVRSEGKQINLKKPAMPVMLSSPAENNNVFHVVVMRVALHCQGCASKVKR 120

Query: 121 HLSRMEGVTSFSIDLEAKRVTVMGHISPLGVLQSISKVKRAELWATQ 168
           HLS+MEGVTSFSIDLEAKRVTVMGHISPLGVLQSISKVKRAELW TQ
Sbjct: 121 HLSKMEGVTSFSIDLEAKRVTVMGHISPLGVLQSISKVKRAELWPTQ 165

[Close]

BLAST of Cucsa.217770 vs. NCBI nr
Match: gi|731410542|ref|XP_010657601.1| (PREDICTED: uncharacterized protein LOC100243595 [Vitis vinifera])

HSP 1 Score: 163.3 bits (412), Expect = 3.7e-37
Identity = 94/172 (54.65%), Postives = 114/172 (66.28%), Query Frame = 1


Query: 2   KKLGGFMCHSAATTAVCIPSDPRSTVVSRRLARPDYANNNHANNGNRSARFVSNNTVKYS 61
           KK+ G MCHS A TAVCIP DPRS +V RR   PD    +H+       R ++N   KYS
Sbjct: 7   KKMRGLMCHSPAATAVCIPGDPRSVIVPRR---PDRTLVDHS-------RLINN--AKYS 66

Query: 62  KLVES-----SPSLSVRSEGKHINLKKPAMPVMLSSPAEN---NNVFHVVVMRVALHCQG 121
           +LVES     +   SV         +  A P+    P+     ++VF VVVMRV+LHCQG
Sbjct: 67  RLVESHRFTPAAKRSVLVPAMKRGHRPSAEPMPFHPPSSTPSLDHVFQVVVMRVSLHCQG 126

Query: 122 CASKVKRHLSRMEGVTSFSIDLEAKRVTVMGHISPLGVLQSISKVKRAELWA 166
           CA KVK+HLS+MEGVTSFSIDLE KRVTVMGH+SP GVL+SISKVK+AELW+
Sbjct: 127 CAGKVKKHLSKMEGVTSFSIDLETKRVTVMGHVSPSGVLESISKVKKAELWS 166

[Close]

BLAST of Cucsa.217770 vs. NCBI nr
Match: gi|593792090|ref|XP_007159084.1| (hypothetical protein PHAVU_002G207200g [Phaseolus vulgaris])

HSP 1 Score: 160.6 bits (405), Expect = 2.4e-36
Identity = 92/163 (56.44%), Postives = 114/163 (69.94%), Query Frame = 1


Query: 6   GFMCHSAATTAVCIPS-DPRSTVVSRRLARPDYANNNHANNGNRSARFVSNNTVKYSKLV 65
           GFMCHS A+TAVC+ + DPR  VV +RL R  + ++          R +  N  KYSKLV
Sbjct: 14  GFMCHSQASTAVCMSTRDPRPVVVPKRLERSVFLDDT---------RLI--NYAKYSKLV 73

Query: 66  E---SSPSLSVRSEGKHINLKKPAMPVMLSSPAENNNVFHVVVMRVALHCQGCASKVKRH 125
           E   S+P   ++  G+  +  K     +L +  +NN VF VVVMRVA+HCQGCA KVK+H
Sbjct: 74  EPPRSNPVPKIKLRGQDQDQAKNEPRELLKTQTDNN-VFQVVVMRVAIHCQGCAGKVKKH 133

Query: 126 LSRMEGVTSFSIDLEAKRVTVMGHISPLGVLQSISKVKRAELW 165
           LS+MEGVTSFSIDLE+KRVTVMGHISP+ VL+SISKVKRAELW
Sbjct: 134 LSKMEGVTSFSIDLESKRVTVMGHISPVAVLESISKVKRAELW 164

[Close]

BLAST of Cucsa.217770 vs. NCBI nr
Match: gi|743869893|ref|XP_010905917.1| (PREDICTED: uncharacterized protein LOC105033001 [Elaeis guineensis])

HSP 1 Score: 159.8 bits (403), Expect = 4.1e-36
Identity = 90/171 (52.63%), Postives = 115/171 (67.25%), Query Frame = 1


Query: 3   KLGGFMCHSAATTAVCIPSDPRSTVVSRRLARPDYANNNHANNGNRSARFVSNNTVKYSK 62
           +  G MC S A+TAVC+P DPRS VV RR   PD     H+       R V    +KYS+
Sbjct: 2   RTAGMMCRSHASTAVCVPGDPRSMVVLRR---PDRTLVEHS-------RLVD---LKYSR 61

Query: 63  LVESSPSLSVRSEGKHINL-------KKPAMPVMLSSPA--ENNNVFHVVVMRVALHCQG 122
           LV+S   +  R EG+ + L       ++P  P  +S P    N+ VF VVVMRV++HCQG
Sbjct: 62  LVDSRRFMP-RDEGRSVTLPMVLKKEREPPKPTNVSPPPPPSNDQVFQVVVMRVSIHCQG 121

Query: 123 CASKVKRHLSRMEGVTSFSIDLEAKRVTVMGHISPLGVLQSISKVKRAELW 165
           CA KV++H+S+MEGVTS+SIDLE+KRVTVMGH+SP+GVL+SISKVKRAE W
Sbjct: 122 CAGKVRKHISKMEGVTSYSIDLESKRVTVMGHVSPVGVLESISKVKRAEFW 158

The following BLAST results are available for this feature:

BLAST of Cucsa.217770 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATOX1_ARATH	2.2e-10	45.45	Copper transport protein ATX1 OS=Arabidopsis thaliana GN=ATX1 PE=1 SV=2	[more]
CCH_ARATH	5.0e-10	44.78	Copper transport protein CCH OS=Arabidopsis thaliana GN=CCH PE=1 SV=1	[more]
HIP20_ARATH	4.4e-06	37.31	Heavy metal-associated isoprenylated plant protein 20 OS=Arabidopsis thaliana GN...	[more]

BLAST of Cucsa.217770 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2I2_CUCSA	4.9e-89	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G060180 PE=4 SV=1	[more]
V7CNZ1_PHAVU	1.7e-36	56.44	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G207200g PE=4 SV=1	[more]
A0A151T231_CAJCA	3.7e-36	55.15	Uncharacterized protein OS=Cajanus cajan GN=KK1_023554 PE=4 SV=1	[more]
A0A0S3R048_PHAAN	1.1e-35	56.79	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G156700 PE=...	[more]
A0A0L9TMD1_PHAAN	1.1e-35	56.79	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g087400 PE=4 SV=1	[more]

BLAST of Cucsa.217770 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G02600.2	1.9e-20	59.46	Heavy metal transport/detoxification superfamily protein	[more]
AT2G28660.1	7.4e-20	54.43	Chloroplast-targeted copper chaperone protein	[more]
AT2G37390.1	1.4e-18	63.49	Chloroplast-targeted copper chaperone protein	[more]
AT3G24450.1	3.8e-16	34.92	Heavy metal transport/detoxification superfamily protein	[more]
AT3G53530.2	2.5e-15	51.85	Chloroplast-targeted copper chaperone protein	[more]

BLAST of Cucsa.217770 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778724303\|ref\|XP_011658781.1\|	7.0e-89	100.00	PREDICTED: uncharacterized protein LOC105436087 [Cucumis sativus]	[more]
gi\|659111017\|ref\|XP_008455533.1\|	2.5e-78	92.81	PREDICTED: uncharacterized protein LOC103495684 [Cucumis melo]	[more]
gi\|731410542\|ref\|XP_010657601.1\|	3.7e-37	54.65	PREDICTED: uncharacterized protein LOC100243595 [Vitis vinifera]	[more]
gi\|593792090\|ref\|XP_007159084.1\|	2.4e-36	56.44	hypothetical protein PHAVU_002G207200g [Phaseolus vulgaris]	[more]
gi\|743869893\|ref\|XP_010905917.1\|	4.1e-36	52.63	PREDICTED: uncharacterized protein LOC105033001 [Elaeis guineensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006121	HMA_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0030001	metal ion transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030001	metal ion transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.217770.1	Cucsa.217770.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 105..151 score: 5.1
IPR006121	Heavy metal-associated domain, HMA	PROFILE	PS50846	HMA_2	coord: 101..158 score: 11
IPR006121	Heavy metal-associated domain, HMA	unknown	SSF55008	HMA, heavy metal-associated domain	coord: 100..159 score: 1.7
None	No IPR available	GENE3D	G3DSA:3.30.70.100		coord: 102..164 score: 8.5
None	No IPR available	PANTHER	PTHR22814	COPPER TRANSPORT PROTEIN ATOX1-RELATED	coord: 88..165 score: 1.4
None	No IPR available	PANTHER	PTHR22814:SF16	CHLOROPLAST-TARGETED COPPER CHAPERONE PROTEIN	coord: 88..165 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.217770	Cla006387	Watermelon (97103) v1	cgywmB417
Cucsa.217770	Csa7G060180	Cucumber (Chinese Long) v2	cgycuB322
Cucsa.217770	MELO3C018661	Melon (DHL92) v3.5.1	cgymeB379
Cucsa.217770	ClCG09G015140	Watermelon (Charleston Gray)	cgywcgB391
Cucsa.217770	CSPI07G05370	Wild cucumber (PI 183967)	cgycpiB336
Cucsa.217770	CmaCh19G002710	Cucurbita maxima (Rimu)	cgycmaB0625
Cucsa.217770	Lsi03G007850	Bottle gourd (USVL1VR-Ls)	cgylsiB367
Cucsa.217770	Cp4.1LG15g02430	Cucurbita pepo (Zucchini)	cgycpeB0595
Cucsa.217770	MELO3C018661.2	Melon (DHL92) v3.6.1	cgymedB377
Cucsa.217770	CsaV3_7G006310	Cucumber (Chinese Long) v3	cgycucB342
Cucsa.217770	Cla97C09G177230	Watermelon (97103) v2	cgywmbB399
Cucsa.217770	Bhi05G000669	Wax gourd	cgywgoB445
Cucsa.217770	Carg24572	Silver-seed gourd	carcgyB0720

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.217770	Cucurbita moschata (Rifu)	cgycmoB0628