Cp4.1LG15g01440 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG15g01440
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionE3 ubiquitin-protein ligase RING2-like protein
LocationCp4.1LG15 : 1195312 .. 1201911 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGAGATGAAGAAGGAAGAACCAAGCAACACACGTGTGACGCAATTATTGTGAATGCAAGAACCCTGGAGCTTCCTCTCTGCCGTGTCTCGATTTTCATTTCCAATCCCCAGCCCTTTCTCCATTTCTCCCTTTATAATGGCGATTTTCCCCTCTCTTCACCTTCCACCTCTCAACCCTTCCAACCCTAATTACAAATATCACAAATTCGCGAGCTAATCCTCCACTCCATACACTTCTAATCTATTCTATCTATCGTAAAATTTCAACATATTTGCTGCCTGTGTATCGCTTCATCAACCGATTATTTCAGGTATTCCATCTCCAGATTGGAAGAATTTTCTAATTTTTTTAATTGTGTATTGTATCTTTTTAATCTTAGTTATGATCTTTGGTTTTTTTTCAATAAATTGTTTTTGTGAATGCTTTGGCCGATGTTCGTTTGAAGAATGAATGTTTTGGTGATGTTCGTTGGAAGAATTTTTGAGTTGTGTAGTTGGGGCAAAAGATCGGATAGATAGAGTATGGGTTGTTTGGATAGGGATTTTGATGATCGGTGTGAATTTTGTGGTTTATTGTTAGTCTTATGATTAATCTGAGGGTTTCATGTAATTGAATCTGTGGTGTAATTAATTTGGAGATTTTCTGACACATTAATGAATGTTTAGGGGGAGAGGGTATTGGTCGATTATAAGAGGTGGGTTTTGTGTATAATGTGGGGTTTTCTCTTTTTATTGTAAATCTAAAGAAGTGTTTGTTGATTAATGAAGTTTTGTTTTGTTTTTCTGAGTTACAAGGATTTTGTTTCTTATATAAAGTTTTTGATTATCGTGCCATTTCAGTGAATGATAACTGAAGTTTCGTTTTCGTATCCAAGCTTCTCAGCTTGTATTTGAATGGTGGTGGTGGTTGTTGTGTTGGCTTTGTTGGAAGCTATCAATTTCCTTCTGAAATTTTANTCAACCCTTCCAACCCTAATTACAAATATCACAAATTCGCGAGCTAATCCTCCACTCCATACACTTCTAATCTATTCTATCTATCGTAAAATTTCAACATATTTGCTGCCTGTGTATCGCTTCATCAACCGATTATTTCAGGTATTCCATCTCCAGATTGGAAGAATTTTCTAATTTTTTTAATTGTGTATTGTATCTTTTTAATCTTAGTTATGATCTTTGGTTTTTTTTCAATAAATTGTTTTTGTGAATGCTTTGGCCGATGTTCGTTTGAAGAATGAATGTTTTGGTGATGTTCGTTGGAAGAATTTTTGAGTTGTGTAGTTGGGGCAAAAGATCGGATAGATAGAGTATGGGTTGTTTGGATAGGGATTTTGATGATCGGTGTGAATTTTGTGGTTTATTGTTAGTCTTATGATTAATCTGAGGGTTTCATGTAATTGAATCTGTGGTGTAATTAATTTGGAGATTTTCTGACACATTAATGAATGTTTAGGGGGAGAGGGTATTGGTCGATTATAAGAGGTGGGTTTTGTGTATAATGTGGGGTTTTCTCTTTTTATTGTAAATCTAAAGAAGTGTTTGTTGATTAATGAAGTTTTGTTTTGTTTTTCTGAGTTACAAGGATTTTGTTTCTTATATAAAGTTTTTGATTATCGTGCCATTTCAGTGAATGATAACTGAAGTTTCGTTTTCGTATCCAAGCTTCTCAGCTTGTATTTGAATGGTGGTGGTGGTTGTTGTGTTGGCTTTGTTGGAAGCTATCAATTTCCTTCTGAAATTTTACAGTGCATGTATGGCAGGTTGTTGAGGAGCTTCGAACTATAGATGAGTACTCAGGCAATGAGAGGACATACTGCAAGAGGTTATCATCGTAGGAAATCATTGGACTTGGACCTAAACAGCATGCCACCAACTGAGAACCGAGATCCTGGGGAGACATCTCAATTTGGATTTCAGGAAGCACAAGTTAATCAACAACAGTCTGTACAGCCTGCAATGATCGACATTGAAGCCATTGATGACGATGTTATTGAATCATCTGCTAGAGCTTTTGCTGAAGTATGATTCTTCTATCCATATTATGTTCCTGTTCTATTGATTCTGATCTGTTTTTCATGGAATCCGTCGATTATCTGTCAGGCTAAAAATAAATCCAGACGGAATGCTAGGAAGAATATAGTTGATGTCGACGCAGGTATGTTCATTTCAGCTTGTGGAGGACTATAGCTCGGTTGATTTTTTTCGTATTACTTTTCTTCCTTTGGATCTTTAGTGTGATTTCTTCTTAAGCTTAGCATCCATTAGTTAGACCCATTCTCTCACTGATTTTTGGACTACCTTGTGCTCCTGTAGCAAGAGCAATAAAATGAAGAGATATTTTTGTTCGATCCATAAATCTTCCCAAAATATGCCTTTATACTAAATTATCAATGCCCATCTAAGGGTCGGAGCTAATGATCATGATAGTTTTTAGCTTGGAGATTCGTAACCACGGTCTACAATCGCTTGTTTAGAATTCGCTATTAGCAAACCACCATAAGTCTTCCATTGCTTGCTATTTTGCAATGACATGACTTTATGCCATTGGCACCACTTTCCGTGGGTACCTTCCTAGCGGTTTAGTTAAAAAGTTGTCGTCTTTAGCTAGCTTCTCTATCGAATCATTCGATTTCATCATCATGACATTAGCTAACCATCCATAAAAAAATAGATTCTTCCACCAACCCTTCCATAGCTCGCAGGAATATGTAGCCATCATAGCTCATGAATGGGGTTAAACCTTTTCATTGCTGCTTAAAACGAGGCCTCGAATTCTTTGAGATCTGTCATTAGAAGCTTCATGAAATCGGTTCTTCCTTGATTACCAGCTCGGCTATAAGTTCCAATCATTCGATGGGGAGGATCAGACCACATAACTGGCTGGTTAGCTATTAGGACTTGTTTGGAATGAAAGGGGCGTCAGCAATGGCTGCCTCCAAGTTTCCAGCTGATATGGACCTTGTGGGCAAGTAACTGTAGATGTTTATTGTCGTTTGCACTGTATTCCACTAGAACCTCTTGTCCATTTGTTGTGAAGCTTGCATCTCTCATTCTCTCATCTTCTAATTGTTGCAGAAGAGCGGAGCAGGGCGTCAAATAATAACCGGAGCAAGCGTAGGAGGGATGTGCCGAATCAACAAACTGTAAATTCTGATTTATTAATCAATTTGGAAGGCAGCAACAGCTCTATGGTACTGGGACAATTTATATCTTCATTACTCTTATTTTTGCTCAAATTTTTCTCGTCGTGTTACTCGTTAGGTATAGTGTATATTATATAATTGTCTTTATGATACCACCATATAAGCACACGTCGAATTGAGGAATTTTCATGGCATGAGATAAGCACTTAGGAAGACAGAAAATGGTGCACTTCGTATTTGGCAAAACTCAGTGTGTTATGCTTTTAGTCATTCCCAGTGCATCTAACTAGTTGGATTATATCTAGATCTTGAGATATTGAGATAACATATTTGTTCCAATACAATATTCAAATACAATATTCAATTTAATGAGAATTTGAATATTGAATAACAAATATGCATCTCTCCTGTAACGACCCAGGCTCACCGCTAGCAGATATTGTCTTCTTTGGGCTTTCCCTTTCGGGCTTTCCCTCAAGGGTTTAAAACGCGTCTGCTAGGGGAAGGTTTCCACACTCTTATAAGTGGTGGTTTGTTCTCCTCCCCAACCAATGTGGGACATCACAATCCACCCCCCTTCGGGGCCCAGCGTCCTCGCTGGCGATCCTTCCTTCCTCCAATCGATGTGGGACCACTCCCAAATCCACCTCCCTTCGGGGCCAAGCGTCCTTGCTGGCACACCGCCTCGTGTCTACCCCCCTTCGGGGAACAGTGAGAAGGCTGGCACATCGTCCGGTGTCTGGCTCTGATGCCATTTGTAACGGCCCAGATCCACCGCTAGCAGATATTGTCCCCTTTGGGCTTTCCCTTTCGGGCTTCCCCTCAAGACTTTAAAACGCGTATGCTAGGGGAAGGTTTCCACACCTTATAAGTGGTGGTTTGTTCTCCTTCCCAACCAATGTGGGACATCACAATCCACCCCCCTTTGGGGCCCAGTATCCTCGCTGGCACTCCTTCCTTCCTCCAATCGATGTGCAACCACCCCAAATCCACCCCCCTTCGAGGCCCAGCGTCCTTACTGGCACACCGCCTCGTGTCTACCCCTTTTGGGGAATAGTGAGAAGGCTAGCACATCGTCCGGTGTCTGGCTCTGATACCATTTGTAACGACCCAGGCCCACCGCTAGCCGATATTGTCCTCTTTGGGCTTTCCCTTTCTAGCTTCCCCTCAAGGCTTTAAAACACATCTGCTAGGGGAAGGTTTCCACACCTTTATACATAGTGGTTTGTTCTCCTCCCCAACCAATGTGATCCAATGTGGGACATCACATTGATCCATGAGTTTCTACAGAGCTCTCTCTCTCATGTTCCTTGTGTTTGGTAACTTTTCTCCCATTGGGAAAGGTTAAGTTAGTTTGTTTATGGTTTCTTTTGAATAATCTCTCTCTCGCACTTCATTCGGTTGATTTCTCTTAAAAATTAGGGTCTGTTCATAGTTCGAACCGATATTTGCTTATCGCTTAACCGAGAACTAAACCATACATTTTGGTTTGATTTCATTTGAAAAAAGTGAATTATAGATGGGTTTGAGCAAAATAATTGAAAACTAAACCAAAGAGTCCCTTCATTAGATCTAATTGTCACTAGGTTTAACGTCGTCTTTGTGACTAAACTCGTGGTGGTCTTTATATGTAGTCGGCTCCCATAATGCAATTCCAGGAGGAGTCGGTAGTAGCTTCTAATTAGCTGTTAGTATTGAAATACGAGTAAAGTGTTGAAAATGGGATGATGATGCGATTTCTATGGTTTTTGCAGAAAGAGAAGGCTTCTCCACCGAAGGAGCCCAATTTCAGTTGTCCAATATGCATGGGTCCGTTGGTAGAAGAAACATCAACAAGGTGTGGTCATATTTTCTGCAAGGCATGCATCAAGACTGCAATAGCCGTCCAGAGTAAATGCCCAACCTGTAGGAAAAGAGTAACTGCCAAAGAACTGATTAGAGTATTCCTTCCTGGAACAAGCTTGGAGTGAGGCTTATATGTAAGTTCCTTAATTTCTCTGCCATTTTCTTGTTCTCATGGTTCAAAAAAGTTGCATGTGCCACGTTTTTAATATGTTTTGTTTGTTATTGGTCGAGCTTTGATGTGAAATCCCACATCGGTTGGGGAGGTGAACGAAACATTATTTATAAGGGTGTGGAAACCTCTTCCTAGCAGACACGTTTTAAAAACCTTGAGGGAAAGTCCATAGACCACAATATCTGCTAGTGGTGGGCTTGGGTTGTTACAAATGGTATTAGAGCTAGACATCGGGCGATGTGCTAGCGAGGAGGTTGAGCCCCAAAGGGGGGGTGAACATGAGGCGGTGTGCTAGCAAGTGCACTGGACCCTGAAGGGGAGGGGGTGGATTGTGAGATCCCACATTGGTTGGGGAGGAGAACGAAACATTATTTATAAGGGTGTGGAAACCTCTCTCTAGCAGACACGTTTTAAAAACCTTGAGGGAAAGTCCATAGACCACAATATCTGCTAGTGGTGGGCTTGGGTTGTTACAAATGGTATTAGAGCTAGACATCGGGCGATGTGCTAGCGAGGAGGTTGAGCCCCAAAGGGGGGGTGAACATGAGGCGGTGTGCTAGCAAGTGCACTGGACCCTGAAGGGGAGGGGGTGGATTGTGAGATCCCACATTGGTTGGGGAGGAGAACGAAACATTATTTATAAGGGTGTGGAAACCTCTCTCTAGCAGACACGTTTTAAAAGCCTTGAGGGAAAGGCCAAAGAGGACAATATCTACTAGCGGTGGGCTTGAGTTTTACAAATGGTATCAAAGCCAGACACGGGGCGATGCGCCAGCGAGAAGGCTAAGGCCCAAAGGGGGGGTGAACATGAGGGCAGTGTGCTAGCAAGGGCGCTGGGGGGGGTGAATTGTGAGATCCCACATCGATTGGGAAGGAGAACGCTGCATTATTTATAAAGGTGTGGAAACCTCTCTCTAGCATACACGTTTTAAAAACCTTGAGAGGAAGCTCAGGATGGAAAAGCCCAAAGAGAACATACAAGATTTCTTTCCTAACTAACTTCGTCTCGTTTTTTATAAAATGGACAGGTGGCTGGATTTTGATTTTGAAGACTTCATTCAAAGTGTAATGGTTGGAGTTTACTTGTATGTAAGAAAAGCTAATTTTTAGGTGGAAATTTGTGGTGCATTCTTCTGCTGATTGATGTGATGGATCTCAGGAAGCGTTAGGAGGAGGAGGAGGAGGAGGAAGTAGCAAGACCATTTAGATTTCCACATTTTTTTTTTCTTTTTCTTCTGTTGTTACGTTGGTGTAAACAAACTGACAATCAAATCCAACCATAATGCAATGAGATTACATAAAATCCATCTACAAAGTTACCTTTGTCGGTCTACATCAACTTGTCTCTCTCTATGTTCTTCATATGAACTTTATATGTCTCATTTCATGTTCTTATATATTTTTGCATTTGTTTGGGAGCCTTCTTGCAGTGCCCATGAG

mRNA sequence

CGAGATGAAGAAGGAAGAACCAAGCAACACACGTGTGACGCAATTATTGTGAATGCAAGAACCCTGGAGCTTCCTCTCTGCCGTGTCTCGATTTTCATTTCCAATCCCCAGCCCTTTCTCCATTTCTCCCTTTATAATGGCGATTTTCCCCTCTCTTCACCTTCCACCTCTCAACCCTTCCAACCCTAATTACAAATATCACAAATTCGCGAGCTAATCCTCCACTCCATACACTTCTAATCTATTCTATCTATCGTAAAATTTCAACATATTTGCTGCCTGTGTATCGCTTCATCAACCGATTATTTCAGGTTGTTGAGGAGCTTCGAACTATAGATGAGTACTCAGGCAATGAGAGGACATACTGCAAGAGGTTATCATCGTAGGAAATCATTGGACTTGGACCTAAACAGCATGCCACCAACTGAGAACCGAGATCCTGGGGAGACATCTCAATTTGGATTTCAGGAAGCACAAGTTAATCAACAACAGTCTGTACAGCCTGCAATGATCGACATTGAAGCCATTGATGACGATGTTATTGAATCATCTGCTAGAGCTTTTGCTGAAGCTAAAAATAAATCCAGACGGAATGCTAGGAAGAATATAGTTGATGTCGACGCAGAAGAGCGGAGCAGGGCGTCAAATAATAACCGGAGCAAGCGTAGGAGGGATGTGCCGAATCAACAAACTGTAAATTCTGATTTATTAATCAATTTGGAAGGCAGCAACAGCTCTATGAAAGAGAAGGCTTCTCCACCGAAGGAGCCCAATTTCAGTTGTCCAATATGCATGGGTCCGTTGGTAGAAGAAACATCAACAAGGTGTGGTCATATTTTCTGCAAGGCATGCATCAAGACTGCAATAGCCGTCCAGAGTAAATGCCCAACCTGTAGGAAAAGAGTAACTGCCAAAGAACTGATTAGAGTATTCCTTCCTGGAACAAGCTTGGAGTGAGGCTTATATGTGGCTGGATTTTGATTTTGAAGACTTCATTCAAAGTGTAATGGTTGGAGTTTACTTGTATGTAAGAAAAGCTAATTTTTAGGTGGAAATTTGTGGTGCATTCTTCTGCTGATTGATGTGATGGATCTCAGGAAGCGTTAGGAGGAGGAGGAGGAGGAGGAAGTAGCAAGACCATTTAGATTTCCACATTTTTTTTTTCTTTTTCTTCTGTTGTTACGTTGGTGTAAACAAACTGACAATCAAATCCAACCATAATGCAATGAGATTACATAAAATCCATCTACAAAGTTACCTTTGTCGGTCTACATCAACTTGTCTCTCTCTATGTTCTTCATATGAACTTTATATGTCTCATTTCATGTTCTTATATATTTTTGCATTTGTTTGGGAGCCTTCTTGCAGTGCCCATGAG

Coding sequence (CDS)

ATGAGTACTCAGGCAATGAGAGGACATACTGCAAGAGGTTATCATCGTAGGAAATCATTGGACTTGGACCTAAACAGCATGCCACCAACTGAGAACCGAGATCCTGGGGAGACATCTCAATTTGGATTTCAGGAAGCACAAGTTAATCAACAACAGTCTGTACAGCCTGCAATGATCGACATTGAAGCCATTGATGACGATGTTATTGAATCATCTGCTAGAGCTTTTGCTGAAGCTAAAAATAAATCCAGACGGAATGCTAGGAAGAATATAGTTGATGTCGACGCAGAAGAGCGGAGCAGGGCGTCAAATAATAACCGGAGCAAGCGTAGGAGGGATGTGCCGAATCAACAAACTGTAAATTCTGATTTATTAATCAATTTGGAAGGCAGCAACAGCTCTATGAAAGAGAAGGCTTCTCCACCGAAGGAGCCCAATTTCAGTTGTCCAATATGCATGGGTCCGTTGGTAGAAGAAACATCAACAAGGTGTGGTCATATTTTCTGCAAGGCATGCATCAAGACTGCAATAGCCGTCCAGAGTAAATGCCCAACCTGTAGGAAAAGAGTAACTGCCAAAGAACTGATTAGAGTATTCCTTCCTGGAACAAGCTTGGAGTGA

Protein sequence

MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDPGETSQFGFQEAQVNQQQSVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTVNSDLLINLEGSNSSMKEKASPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQSKCPTCRKRVTAKELIRVFLPGTSLE
Homology
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BLAST of Cp4.1LG15g01440 vs. Swiss-Prot
Match: RN151_MOUSE (RING finger protein 151 OS=Mus musculus GN=Rnf151 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 9.7e-08
Identity = 28/60 (46.67%), Postives = 36/60 (60.00%), Query Frame = 1 

Query: 139 ASPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQSKCPTCRKRVTAKELIRV 198
           ASPP +  F C +C G L   T   C HIFCK CI   +A Q+ CP CRK VT ++++ V
Sbjct: 11  ASPP-DCKFLCSVCHGVLKRPTRLPCSHIFCKKCIFRWLARQNTCPCCRKEVTRRKMVEV 69

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BLAST of Cp4.1LG15g01440 vs. TrEMBL
Match: A0A151TMW3_CAJCA (52 kDa Ro protein OS=Cajanus cajan GN=KK1_021992 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 5.1e-56
Identity = 127/209 (60.77%), Postives = 155/209 (74.16%), Query Frame = 1 

Query: 1   MSTQAMRGHT--ARGYHRRKS-LDLDLNSMPPTENRDP-GETSQFGFQEAQVNQQQSV-Q 60
           MS++  +G     R Y RRK+ LDLDLN +P  ENR+  G ++Q G QEAQV QQ  V Q
Sbjct: 1   MSSRTNKGVALAVRSYRRRKADLDLDLNRVPTGENREQEGPSNQSGPQEAQVQQQPQVPQ 60

Query: 61  PAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVP 120
           P +ID+EAIDDDV+E +  AFAEAKN SRRN  + IVDVD+E+ +R ++NN++KRRR   
Sbjct: 61  PPLIDVEAIDDDVVECTPTAFAEAKNYSRRNRGRTIVDVDSEDPTRVADNNQNKRRRQ-S 120

Query: 121 NQQTVNSDLLINLEGSNSSMKEKASPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKT 180
           N   +  D  INLEG  SSMK+   PPKEP F+CPIC+GPLVEETSTRCGHIFCK CIK+
Sbjct: 121 NPTIIICDEYINLEGGGSSMKKPPEPPKEPVFNCPICIGPLVEETSTRCGHIFCKNCIKS 180

Query: 181 AIAVQSKCPTCRKRVTAKELIRVFLPGTS 205
           AI+ Q KCPTCRK++  KELIRVFLP TS
Sbjct: 181 AISAQGKCPTCRKKIVVKELIRVFLPSTS 208

[Close]
BLAST of Cp4.1LG15g01440 vs. TrEMBL
Match: A0A061DV39_THECC (RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_002857 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 3.7e-54
Identity = 126/210 (60.00%), Postives = 152/210 (72.38%), Query Frame = 1 

Query: 1   MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDP-GETSQFGFQEAQVNQQQSVQPAMI 60
           MST  +RG + RGY RRK++ LDLN +PP+E R+  G + Q G +E        V PA I
Sbjct: 1   MSTLEVRGPSLRGYRRRKAV-LDLN-VPPSEIREQEGTSQQAGSEELTSQPLPPVPPATI 60

Query: 61  DIEAIDDDVIESSARAFAEAKNKSRRN-ARKNIVDVDAEERSRASNNNRSKRRRDVPNQQ 120
           D+EA DDDVIESSARAFAEAKN SRR+  R  +VD+D+ + +R++NNN ++RRR  P+Q 
Sbjct: 61  DVEAFDDDVIESSARAFAEAKNNSRRSRGRTVLVDLDSGQLARSTNNNHNRRRRLPPSQT 120

Query: 121 TVNSDLLINLEGSNSSMKEKA----SPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIK 180
            +N D  INLE +  +M E+      PPKEP F+CPICMGPLVEE STRCGHIFCKACIK
Sbjct: 121 VINCDHYINLESTAQTMVEEIIKPQPPPKEPTFNCPICMGPLVEEMSTRCGHIFCKACIK 180

Query: 181 TAIAVQSKCPTCRKRVTAKELIRVFLPGTS 205
            AIA Q KCPTCRKRVT KELIRVFLP  S
Sbjct: 181 AAIAAQGKCPTCRKRVTVKELIRVFLPSAS 208

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BLAST of Cp4.1LG15g01440 vs. TrEMBL
Match: C6T066_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G028700 PE=2 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.8e-53
Identity = 125/211 (59.24%), Postives = 154/211 (72.99%), Query Frame = 1 

Query: 1   MSTQAMRGHTARGYHRRKS-LDLDLNSMPPTENRDP-GETSQFGFQEAQVNQQQ-SVQPA 60
           MS++A +G   R Y RRK+ LDLDLN +P  ENR+  G ++Q   +E QV QQQ + QP 
Sbjct: 1   MSSRAGKGPAVRSYRRRKTALDLDLNRVPAGENREQEGPSTQSVPREVQVEQQQQATQPP 60

Query: 61  MIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQ 120
           MID+EAIDDDV+E + RAFAEAKN SRR  R+ IVDVD E+++R     R+KRRR++PN 
Sbjct: 61  MIDVEAIDDDVVECTPRAFAEAKNNSRRVRRRTIVDVDLEDQTR-----RNKRRRELPNL 120

Query: 121 QTVNSDLLINLEGSNSSM----KEKASPPKEPNFSCPICMGPLVEETSTRCGHIFCKACI 180
             +N D  INLEG +SSM    K+   PPKE  F+CPICMGP+V E STRCGHIFCK CI
Sbjct: 121 -IINCDKYINLEGGSSSMEQSFKKPPEPPKELVFNCPICMGPMVHEMSTRCGHIFCKDCI 180

Query: 181 KTAIAVQSKCPTCRKRVTAKELIRVFLPGTS 205
           K AI+ Q KCPTCRK+V AK+LIRV+LP TS
Sbjct: 181 KAAISAQGKCPTCRKKVVAKDLIRVYLPSTS 205

[Close]
BLAST of Cp4.1LG15g01440 vs. TrEMBL
Match: A0A0B2SGJ1_GLYSO (E3 ubiquitin-protein ligase RING2-like protein OS=Glycine soja GN=glysoja_047485 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.4e-53
Identity = 124/211 (58.77%), Postives = 154/211 (72.99%), Query Frame = 1 

Query: 1   MSTQAMRGHTARGYHRRKS-LDLDLNSMPPTENRDP-GETSQFGFQEAQVNQQQSV-QPA 60
           MS++A +G   R Y RRK+ LDLDLN +P  ENR+  G ++Q   QE Q+ QQ  V QP 
Sbjct: 1   MSSRAGKGPAIRSYRRRKTALDLDLNRLPAGENREQEGPSTQAVPQEIQLEQQPQVTQPP 60

Query: 61  MIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQ 120
           MID+EAIDDDV+E + RAFAEAKN SRR  R+ +VD+D E+++R     R+KRRR++PN 
Sbjct: 61  MIDVEAIDDDVVECTPRAFAEAKNNSRRIRRRTVVDIDLEDQTR-----RNKRRRELPNL 120

Query: 121 QTVNSDLLINLEGSNSSM----KEKASPPKEPNFSCPICMGPLVEETSTRCGHIFCKACI 180
             +N D  INLEGS+SSM    K+   PPKE  F+CPICMGP+V E STRCGHIFCK CI
Sbjct: 121 -IINCDKYINLEGSSSSMGGSVKKTPEPPKELVFNCPICMGPMVHEMSTRCGHIFCKDCI 180

Query: 181 KTAIAVQSKCPTCRKRVTAKELIRVFLPGTS 205
           K AI+ Q KCPTCRK+V AK+LIRV+LP TS
Sbjct: 181 KAAISAQGKCPTCRKKVVAKDLIRVYLPSTS 205

[Close]
BLAST of Cp4.1LG15g01440 vs. TrEMBL
Match: I1LIV9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G103800 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.4e-53
Identity = 124/211 (58.77%), Postives = 154/211 (72.99%), Query Frame = 1 

Query: 1   MSTQAMRGHTARGYHRRKS-LDLDLNSMPPTENRDP-GETSQFGFQEAQVNQQQSV-QPA 60
           MS++A +G   R Y RRK+ LDLDLN +P  ENR+  G ++Q   QE Q+ QQ  V QP 
Sbjct: 1   MSSRAGKGPAIRSYRRRKTALDLDLNRLPAGENREQEGPSTQAVPQEIQLEQQPQVTQPP 60

Query: 61  MIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQ 120
           MID+EAIDDDV+E + RAFAEAKN SRR  R+ +VD+D E+++R     R+KRRR++PN 
Sbjct: 61  MIDVEAIDDDVVECTPRAFAEAKNNSRRIRRRTVVDIDLEDQTR-----RNKRRRELPNL 120

Query: 121 QTVNSDLLINLEGSNSSM----KEKASPPKEPNFSCPICMGPLVEETSTRCGHIFCKACI 180
             +N D  INLEGS+SSM    K+   PPKE  F+CPICMGP+V E STRCGHIFCK CI
Sbjct: 121 -IINCDKYINLEGSSSSMGGSVKKTPEPPKELVFNCPICMGPMVHEMSTRCGHIFCKDCI 180

Query: 181 KTAIAVQSKCPTCRKRVTAKELIRVFLPGTS 205
           K AI+ Q KCPTCRK+V AK+LIRV+LP TS
Sbjct: 181 KAAISAQGKCPTCRKKVVAKDLIRVYLPSTS 205

[Close]
BLAST of Cp4.1LG15g01440 vs. TAIR10
Match: AT5G48655.2 (AT5G48655.2 RING/U-box superfamily protein)

HSP 1 Score: 159.8 bits (403), Expect = 1.7e-39
Identity = 103/211 (48.82%), Postives = 137/211 (64.93%), Query Frame = 1 

Query: 1   MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDPGETSQFGFQEAQVNQQQSVQPAMID 60
           M+T  +R    RG  RRK++ +DLN++P  +    G ++        +   Q   P MID
Sbjct: 1   MNTSEVR--VPRGNRRRKAV-IDLNAVPVDQE---GTSASVRTLTVPITPSQPA-PTMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKN--IVDVDAEERSRASNNNRSKRRRDVPNQQ 120
           ++AI+DDVIESSA AFAEAK+KS RNAR+   +VDV++   +R   N  +KRRR +P+ +
Sbjct: 61  VDAIEDDVIESSASAFAEAKSKS-RNARRRPLMVDVESGGTTRFPANISNKRRR-IPSSE 120

Query: 121 TV------NSDLLINLEGSNSSMKEKASPPKEPNFSCPICMGPLVEETSTRCGHIFCKAC 180
           +V      + +  +N+    S  K  A PP+EP F+CPICM P  EE ST+CGHIFCK C
Sbjct: 121 SVIDCEHASVNDEVNMSSRVSRSKAPAPPPEEPKFTCPICMCPFTEEMSTKCGHIFCKGC 180

Query: 181 IKTAIAVQSKCPTCRKRVTAKELIRVFLPGT 204
           IK AI+ Q KCPTCRK+VTAKELIRVFLP T
Sbjct: 181 IKMAISRQGKCPTCRKKVTAKELIRVFLPTT 202

[Close]
BLAST of Cp4.1LG15g01440 vs. TAIR10
Match: AT3G07200.1 (AT3G07200.1 RING/U-box superfamily protein)

HSP 1 Score: 131.0 bits (328), Expect = 8.7e-31
Identity = 86/176 (48.86%), Postives = 113/176 (64.20%), Query Frame = 1 

Query: 30  TENRDPGETSQFGFQEAQVNQQQSVQPAMIDIEAI--DDDVIESSARAFAEAKNKSRRNA 89
           T+N   G+  Q    +A    Q    P  I++ AI  DDDV+ES+A AFA+AKNKSR +A
Sbjct: 19  TQNEHQGD--QQVADQAPTVPQIVATPPRINVVAIEDDDDVVESTASAFAQAKNKSR-SA 78

Query: 90  RKNIVDVDAEERSRASNNNRSKRRRDVPNQQTVNSDLLINLEGSNSSMKEKASPPKEPNF 149
           R+    VD E    ++  NRS RRR   +Q +V+S   + L     S K  A P +EP F
Sbjct: 79  RRGSQVVDVE----SAGANRSTRRRS--DQTSVDS---VELNKPRKS-KAVAPPVEEPKF 138

Query: 150 SCPICMGPLVEETSTRCGHIFCKACIKTAIAVQSKCPTCRKRVTAKELIRVFLPGT 204
           SCPIC+ P  +E ST+CGHIFCK CIK A+++Q+KCPTCRK++T K+LIRVFLP T
Sbjct: 139 SCPICLCPFTQEVSTKCGHIFCKKCIKNALSLQAKCPTCRKKITVKDLIRVFLPTT 181

[Close]
BLAST of Cp4.1LG15g01440 vs. TAIR10
Match: AT5G05130.1 (AT5G05130.1 DNA/RNA helicase protein)

HSP 1 Score: 50.4 bits (119), Expect = 1.5e-06
Identity = 23/51 (45.10%), Postives = 30/51 (58.82%), Query Frame = 1 

Query: 146 NFSCPICMGPLVEETSTRCGHIFCKACI-KTAIAVQSKCPTCRKRVTAKEL 196
           +F CPIC+ P      TRC HIFC+ACI +T    +  CP CR  +T  +L
Sbjct: 613 DFDCPICISPPTNIIITRCAHIFCRACILQTLQRSKPLCPLCRGSLTQSDL 663

[Close]
BLAST of Cp4.1LG15g01440 vs. TAIR10
Match: AT1G18660.4 (AT1G18660.4 zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 49.3 bits (116), Expect = 3.3e-06
Identity = 20/56 (35.71%), Postives = 31/56 (55.36%), Query Frame = 1 

Query: 132 NSSMKEKASPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQSKCPTCR 188
           NS  K      +  +F C +C+  L E  +T CGH FC++C+  ++   +KCP CR
Sbjct: 179 NSMRKTHGMAERSDDFDCTVCLKLLYEPATTPCGHTFCRSCLFQSMDRGNKCPLCR 234

[Close]
BLAST of Cp4.1LG15g01440 vs. NCBI nr
Match: gi|449453284|ref|XP_004144388.1| (PREDICTED: E3 ubiquitin-protein ligase RNF4 [Cucumis sativus])

HSP 1 Score: 359.4 bits (921), Expect = 4.3e-96
Identity = 185/206 (89.81%), Postives = 191/206 (92.72%), Query Frame = 1 

Query: 1   MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDPGETSQFGFQEAQVNQQQSVQPAMID 60
           MSTQAMRGHT RGYHRRKSLDLDLNSMPPTENRD GETSQ   Q+AQVNQQQ VQPAMID
Sbjct: 1   MSTQAMRGHTTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTV 120
           IEAIDDDVIESSARAFAEAKNKSRRNARKN+VDVDAEERSR SNNNRSKRRRDV N+ +V
Sbjct: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERSRVSNNNRSKRRRDVSNRPSV 120

Query: 121 NSDLLINLEGSNSSMKEKASPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQ 180
           NSDLLINLE SNSSMK K +PPKEP FSCPICMGPLVEETSTRCGHIFCKACI+ AI VQ
Sbjct: 121 NSDLLINLEASNSSMKVKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIGVQ 180

Query: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 207
           SKCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 206

[Close]
BLAST of Cp4.1LG15g01440 vs. NCBI nr
Match: gi|659120828|ref|XP_008460369.1| (PREDICTED: E3 ubiquitin-protein ligase RNF4-like isoform X1 [Cucumis melo])

HSP 1 Score: 356.3 bits (913), Expect = 3.6e-95
Identity = 183/206 (88.83%), Postives = 190/206 (92.23%), Query Frame = 1 

Query: 1   MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDPGETSQFGFQEAQVNQQQSVQPAMID 60
           MSTQAMRGH  RGYHRRKSLDLDLNSMPPTENRD GETSQ   Q+AQVNQQQ VQPAMID
Sbjct: 1   MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTV 120
           IEAIDDDVIESSARAFAEAKNKSRRNARKN+VDVDAEERSR SNNNRSKRRRDV N+ +V
Sbjct: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERSRVSNNNRSKRRRDVSNRPSV 120

Query: 121 NSDLLINLEGSNSSMKEKASPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQ 180
           NSDLLINLE SNSSMK K +PPKEP FSCPICMGPLVEETST+CGHIFCKACI+ AI VQ
Sbjct: 121 NSDLLINLEASNSSMKVKPAPPKEPKFSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQ 180

Query: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 207
           SKCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 206

[Close]
BLAST of Cp4.1LG15g01440 vs. NCBI nr
Match: gi|659120837|ref|XP_008460373.1| (PREDICTED: E3 ubiquitin-protein ligase RNF4-like isoform X2 [Cucumis melo])

HSP 1 Score: 350.1 bits (897), Expect = 2.6e-93
Identity = 182/206 (88.35%), Postives = 189/206 (91.75%), Query Frame = 1 

Query: 1   MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDPGETSQFGFQEAQVNQQQSVQPAMID 60
           MSTQAMRGH  RGYHRRKSLDLDLNSMPPTENRD GETSQ   Q+AQVNQQQ VQPAMID
Sbjct: 1   MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTV 120
           IEAIDDDVIESSARAFAEAKNKSRRNARKN+VDVDAE RSR SNNNRSKRRRDV N+ +V
Sbjct: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAE-RSRVSNNNRSKRRRDVSNRPSV 120

Query: 121 NSDLLINLEGSNSSMKEKASPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQ 180
           NSDLLINLE SNSSMK K +PPKEP FSCPICMGPLVEETST+CGHIFCKACI+ AI VQ
Sbjct: 121 NSDLLINLEASNSSMKVKPAPPKEPKFSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQ 180

Query: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 207
           SKCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 205

[Close]
BLAST of Cp4.1LG15g01440 vs. NCBI nr
Match: gi|502144767|ref|XP_004505743.1| (PREDICTED: E3 ubiquitin-protein ligase RNF4 [Cicer arietinum])

HSP 1 Score: 237.7 bits (605), Expect = 1.9e-59
Identity = 133/219 (60.73%), Postives = 155/219 (70.78%), Query Frame = 1 

Query: 1   MSTQAMRGHTARGYHRRKS-LDLDLNSMPPTEN------RDPGETSQFGFQEAQVNQQQS 60
           MS++  R    R Y RRK+ LDLDLN +P  +N         G ++Q G QE +V   Q 
Sbjct: 1   MSSRTSRVPAVRSYRRRKAVLDLDLNRVPAGDNPAGENREQEGPSTQLGPQEVEVQANQQ 60

Query: 61  -----VQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRS 120
                + P MID+EAIDDDVIESS RAFAEAKN SRRN  + IVDVD EE+SR  NNNR+
Sbjct: 61  PLIVQLPPPMIDVEAIDDDVIESSPRAFAEAKNNSRRNRGRTIVDVDLEEQSRVINNNRN 120

Query: 121 KRRRDVPNQQTVNSDLLINLEGSNSS----MKEKASPPKEPNFSCPICMGPLVEETSTRC 180
           KRRR+ PNQ  +N DL INLEG +SS    +K+   PPKEP FSCPICMGPLVEE STRC
Sbjct: 121 KRRREPPNQSIINCDLYINLEGGSSSTLESVKKPPEPPKEPVFSCPICMGPLVEEMSTRC 180

Query: 181 GHIFCKACIKTAIAVQSKCPTCRKRVTAKELIRVFLPGT 204
           GHIFCK CIK AI+ Q+KCPTCRK++T KELIRVFLP T
Sbjct: 181 GHIFCKTCIKAAISAQAKCPTCRKKITVKELIRVFLPTT 219

[Close]
BLAST of Cp4.1LG15g01440 vs. NCBI nr
Match: gi|1012357184|gb|KYP68369.1| (52 kDa Ro protein [Cajanus cajan])

HSP 1 Score: 225.7 bits (574), Expect = 7.3e-56
Identity = 127/209 (60.77%), Postives = 155/209 (74.16%), Query Frame = 1 

Query: 1   MSTQAMRGHT--ARGYHRRKS-LDLDLNSMPPTENRDP-GETSQFGFQEAQVNQQQSV-Q 60
           MS++  +G     R Y RRK+ LDLDLN +P  ENR+  G ++Q G QEAQV QQ  V Q
Sbjct: 1   MSSRTNKGVALAVRSYRRRKADLDLDLNRVPTGENREQEGPSNQSGPQEAQVQQQPQVPQ 60

Query: 61  PAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVP 120
           P +ID+EAIDDDV+E +  AFAEAKN SRRN  + IVDVD+E+ +R ++NN++KRRR   
Sbjct: 61  PPLIDVEAIDDDVVECTPTAFAEAKNYSRRNRGRTIVDVDSEDPTRVADNNQNKRRRQ-S 120

Query: 121 NQQTVNSDLLINLEGSNSSMKEKASPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKT 180
           N   +  D  INLEG  SSMK+   PPKEP F+CPIC+GPLVEETSTRCGHIFCK CIK+
Sbjct: 121 NPTIIICDEYINLEGGGSSMKKPPEPPKEPVFNCPICIGPLVEETSTRCGHIFCKNCIKS 180

Query: 181 AIAVQSKCPTCRKRVTAKELIRVFLPGTS 205
           AI+ Q KCPTCRK++  KELIRVFLP TS
Sbjct: 181 AISAQGKCPTCRKKIVVKELIRVFLPSTS 208

The following BLAST results are available for this feature:
BLAST of Cp4.1LG15g01440 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RN151_MOUSE9.7e-0846.67RING finger protein 151 OS=Mus musculus GN=Rnf151 PE=1 SV=1[more]
BLAST of Cp4.1LG15g01440 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A151TMW3_CAJCA5.1e-5660.7752 kDa Ro protein OS=Cajanus cajan GN=KK1_021992 PE=4 SV=1[more]
A0A061DV39_THECC3.7e-5460.00RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_002857 PE=4 S... [more]
C6T066_SOYBN1.8e-5359.24Uncharacterized protein OS=Glycine max GN=GLYMA_12G028700 PE=2 SV=1[more]
A0A0B2SGJ1_GLYSO2.4e-5358.77E3 ubiquitin-protein ligase RING2-like protein OS=Glycine soja GN=glysoja_047485... [more]
I1LIV9_SOYBN2.4e-5358.77Uncharacterized protein OS=Glycine max GN=GLYMA_11G103800 PE=4 SV=1[more]
BLAST of Cp4.1LG15g01440 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G48655.21.7e-3948.82 RING/U-box superfamily protein[more]
AT3G07200.18.7e-3148.86 RING/U-box superfamily protein[more]
AT5G05130.11.5e-0645.10 DNA/RNA helicase protein[more]
AT1G18660.43.3e-0635.71 zinc finger (C3HC4-type RING finger) family protein[more]
BLAST of Cp4.1LG15g01440 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449453284|ref|XP_004144388.1|4.3e-9689.81PREDICTED: E3 ubiquitin-protein ligase RNF4 [Cucumis sativus][more]
gi|659120828|ref|XP_008460369.1|3.6e-9588.83PREDICTED: E3 ubiquitin-protein ligase RNF4-like isoform X1 [Cucumis melo][more]
gi|659120837|ref|XP_008460373.1|2.6e-9388.35PREDICTED: E3 ubiquitin-protein ligase RNF4-like isoform X2 [Cucumis melo][more]
gi|502144767|ref|XP_004505743.1|1.9e-5960.73PREDICTED: E3 ubiquitin-protein ligase RNF4 [Cicer arietinum][more]
gi|1012357184|gb|KYP68369.1|7.3e-5660.7752 kDa Ro protein [Cajanus cajan][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR017907Znf_RING_CS
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0016567 protein ubiquitination
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0016874 ligase activity
molecular_function GO:0061630 ubiquitin protein ligase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g01440.1Cp4.1LG15g01440.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 148..187
score: 1.
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 149..186
score: 6.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 149..187
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 132..197
score: 1.4
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 164..173
scor
NoneNo IPR availablePANTHERPTHR23041RING FINGER DOMAIN-CONTAININGcoord: 1..201
score: 7.7
NoneNo IPR availablePANTHERPTHR23041:SF63C3HC4 ZINC FINGER DOMAIN-CONTAINING PROTEIN-RELATEDcoord: 1..201
score: 7.7
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 144..193
score: 7.07

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG15g01440Cucsa.150150Cucumber (Gy14) v1cgycpeB0399
Cp4.1LG15g01440CmaCh19G001690Cucurbita maxima (Rimu)cmacpeB522
Cp4.1LG15g01440CmaCh02G016740Cucurbita maxima (Rimu)cmacpeB615
Cp4.1LG15g01440CmoCh19G001860Cucurbita moschata (Rifu)cmocpeB481
Cp4.1LG15g01440CmoCh02G017180Cucurbita moschata (Rifu)cmocpeB564
Cp4.1LG15g01440Cla002709Watermelon (97103) v1cpewmB258
Cp4.1LG15g01440Csa3G630250Cucumber (Chinese Long) v2cpecuB238
Cp4.1LG15g01440MELO3C022715Melon (DHL92) v3.5.1cpemeB229
Cp4.1LG15g01440ClCG07G002050Watermelon (Charleston Gray)cpewcgB240
Cp4.1LG15g01440CSPI03G27620Wild cucumber (PI 183967)cpecpiB242
Cp4.1LG15g01440Lsi05G011260Bottle gourd (USVL1VR-Ls)cpelsiB209
Cp4.1LG15g01440MELO3C006300.2Melon (DHL92) v3.6.1cpemedB283
Cp4.1LG15g01440MELO3C022715.2Melon (DHL92) v3.6.1cpemedB268
Cp4.1LG15g01440CsaV3_3G030010Cucumber (Chinese Long) v3cpecucB0297
Cp4.1LG15g01440CsaV3_3G010820Cucumber (Chinese Long) v3cpecucB0308
Cp4.1LG15g01440Bhi05G000048Wax gourdcpewgoB0327
Cp4.1LG15g01440CsGy3G010780Cucumber (Gy14) v2cgybcpeB341
Cp4.1LG15g01440CsGy3G025660Cucumber (Gy14) v2cgybcpeB331
Cp4.1LG15g01440Carg08896Silver-seed gourdcarcpeB1094
Cp4.1LG15g01440Carg06301Silver-seed gourdcarcpeB1329
Cp4.1LG15g01440Carg26386Silver-seed gourdcarcpeB0405
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG15g01440Cp4.1LG03g18030Cucurbita pepo (Zucchini)cpecpeB265
Cp4.1LG15g01440Cp4.1LG05g00670Cucurbita pepo (Zucchini)cpecpeB273
Cp4.1LG15g01440Cp4.1LG08g02700Cucurbita pepo (Zucchini)cpecpeB284
The following block(s) are covering this gene:

None